Lag0041184 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041184
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	cell number regulator 2-like
Location	chr13: 13396316 .. 13401805 (-)
RNA-Seq Expression	Lag0041184
Synteny	Lag0041184

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGCGGTATTCCGGTGAACTCGACGAACGGAACGCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGGGATCGTGTAAATTCATTCTCCCTCTTCTCGATCTCTATTCATTACAAACATGTTTCAGAGAAATTTTGACCGCTAAAATCACTTATGTTTTTTAAATGCGCGAAGTTTTGCAATTGTGTGGGAGTAATTTTCGATCAATCACTTGGGAGGTGATTTTTGAATGATTTAGATTATTACTCTCTCTTGTTTTTCATTCTCTTTTTCTCCAAAATTAGGTTAAGAGTATGCATAAAAAATTAAATTTACTCTACTTGAATGCCTTGTTTATTTTATGCGATGATTTAACATAATATTAAAGTAGTAGGGAGTTTTTAAGTTTAAATTCCTGCCATGTTTATGTTATATTTGTTTAAATTGCTACGATGTTTATTTTTCTAAATTCTTGGATCTTATATTAATTTTCAAGTCCACGAAGGAAGAATAATTAAAAAAAAATAAAGTTATATTCACCCTCATTAATTATATTTCATTACTATTGAGATTGATCATGATAGTCAATATAACTTTTTATTCAACATGTATCCTATAATCATATTCATTATTATTATTATTATTATTTTTTTTTTTTTTGAGACAAATCATATTCATTATTATTGATTTAGTCACTAATTTTTTTAATTATAATATAACAATTATTGTACACTGATTGACTTGCATAATTTTTTTTATGCTTCCTTTGTAATTATTATTTATTTGATATTTTGTCTTTATTATACTAGATCTGCTATCATAAAGTGATGTAGTTGTTTTCTTATTTATTATCTTTTAAAATATGAGTTACAAGCAAATGAGATTTTTTGTTTTAAAATTTTAATTAAAATTACTAATACCTCAACTAATTGAATTATATTCATATTATATATGATGTTTCGATTAACTAATTTTCACAGGTTGTTGTACGTTTTGGTGTCCATGTGTCCCTTTTGGGCAAGCATCAGAGATCATCGATGAAGGATCAACTTGTAAGCTTCAATCCAACCATTGCTAAACGTTGTTGTACTAAACCTAATATTTAACAAAAGATCCCACATAAAAAAAAAGTATACATGTATATAATATTATGGCTAAATTATAAAAAAAAATACTCCTGAACTATGAGATTTGTTTAAAAAATACCCCTTAACTTTGAAAAGTTTCAAAAATACTCCTGAACTTTGAAAAATGTTTCAAAAATGTCATTGCCATTAATTTTTGGATGAAAACCGTTAAAGTTTCAGTTTCAAAAATACCCTTGAACTTTAAAAAAACAAAAAATTAAAAAATACCCTTATTGAAGAATGTTTATTTTTTTTCCTCCTCTAACCATTAACGGCAAGAGTATTTTTGAAACTTTTCAAAGTTCAGGGGCATTTTTGAAACAAACCCCATAGTTCAGGGGTATTTTTTATAATTTAGCCTAATATTATTCTAACAATTCCAAGAGGGAAAAAAAAAGATGGGAAGAAATTATCTATTTTTTCTCGTGAGATGTTTTGAACAATAATTGCTAAAAATGATGTGGTACTATGAAATAGACCTAACATTCAATATATATATATATATCATTTAGCTTCTTTTTTTTTTATTATTATTATTATATATTGAAGTATAGTGAGGAGGTACAAACATACTAATTTTACTACTTATGCTCAGGTCATTCATAAAAAAAAGATTCAACTTAATATGTTTAAAATTATTTTTTAAAACAAAATTCTCTAAGATACTAGCTTATGTAATTGGTTTCAAATTTGTTTTGAACTTTGAAGATAGTTTTTATGCTACCCTTCATCTAATAATTTTGTTTAAAGTTTTCTATTAATAAATGTAATTAGTTTCAATTTTGCCCTTTTATTTCTATTTAGGGTGTAACTATCTTTGATGTTTTAAAAAATTGCTAATGGTCATAGGACCATACTTCTTTTTTGACTGAGCAGCCTACTATATTAATTTTTTTTATAGGTGTTTGTTAAAAAAAAAAAAAAAAAAGGAGAAAGAAAATATCATCTCTTTTCTTTATGTATTCATCTTTGAGATTTGATATCACAATTAAAAACTTGGTGGGAAACATAAAGAAAATCCTTTTTTTTAGTTCAACAACATTTGGGGTGGGGAGATTTGAACATTTGACCTCTAGATCAACTTTTCGTTTTTTTATCGTGCTTTCATCACCAAAACCGCTTCTTTCTTGTAAGGACTTTGGCAACATAAAGAAAATCCCTATTGCCCAATTAGTAGACATATATTCTTTCCATAACAAGTTAAGATCAGGGTATGATCAAAACTATTAGAATATAAAAAGAAAAAAGTGAAACAAATTACGGGTGTGTTTGGTTTTACTTTTCAAGTGTTTAATTTTGAAAATAAATCATTTTGAAAAAAATTCTAGTGTTTGGCAACCATTAAAAATGACTTATTAGAAAATGAGATTGATAAATAAACCATTTTGAGAGAAACACTTGAAACCAACTTTGTAAAAAATACTTCTTAAGTAAAAAATAACTTGTGTATAAAAATATTTATGAGGAAATTCAACCAAACATATAAGCGTTTAAATTCTAAATAATTTTTATACAAAATGTTTTTTAAAAAATACTTTGAAAAACATTTTTAAAAAATGCCATTTGGTTTTTAAAATTCAAGCCTACAAACACTACTTCCACTTTTTTTTTTTATTTTATTTACATTTAAACATGTTTTCAAAATCTAAGCCAAAATTTTAAAACTAAAAAAAAAAAGTTTTAGGTCGAAAAGTTGTTTGTTTTTGGAATTTGGCTAAGAATTTTAATATTTTCATAAGAAATGTGAAAACAAAAGTAAAGAAATACTAAAGAAACAAACATATAATTTTCAAAAATAGAAAACAAAAATTGAAATTGTGAATGAGGAGATTCAAACGTGATTTATCAAAGACGACACTAGTGCATGTACATGCCAAATTACCACTAACTTATGTTCATTTGATTGTATAACCTCCACTTTGGGCTATATTTATTTCTATATATATATATATAACATCTAGGGGTGTTCAAAATTAGACCGAAAACCGACTCGACCGACCGAAACCGACCGAACCGAGGTCGGTCGGTCGGTTTTTTGCTAGATTCGGTCGGAGTCGGTTTTTTCAATGACAAAACCGACCGTCGGTCGGTCGGTTCAACAAAAAATTTTAAAAACCGACCGACCGACCGATAATAGTATATTACAAAAAAAAAAAAATTATTTTGCCCAAGTTTGCTGACCTCACGCACACACTGCCCAATGCAGTCTTTTCAGCCATCTTTTCAGCCTTCTTTTCCACTCTTTTCAAAGTTATTTTTTCAAAAAGTAATGATTACTTTTTTAAATTTATTATTTTTTATTCTTCTCTCTCTTTCTTTTTTGTCTTTTCTTCTTCCCATTTTTTTCGTTTCACGAAACAATCTCTCTTTCTTCCCTCTTTTCTTTCTCTCTCCTTTTTCACTTTTATCTCTCTCTTTTCTTCTTCTTTTTTCTCTTCTCTTTCTTTCTTCTTCATCTTATCTCCTCTTCCACCGATTTCTTTCAATCTCTCTTGTCCTTCCATTTCTTTCTCATTCTCTCATTTTCATCCTCCAGCGTCGACGGACTCGGCACACCAAGACGATTTTCGTTTTCTTTCTTTTCTTTTTCTTTTTCTTCTATATTAATATTTCTTTCTTCTTTTTCTCTCTATCTTTCTTTTTTCCTTGTTTTTCTTCCATTCTTTTCTCCTCCTCCCCTTGCTTCAAACCCTTGCCAAACTTTCGACAACATCTCTTCTCAAGTCGGAAAACCGACAAAATCGACCGACCGACCGTCTATTTGGTCGGTCGGTTTTAGAGAGCACTCCAAAATTTTCGACCACCGACCGACCGAAACCGATAGGTCGGTTTTCGGCGTCGGTTTTCGGCGTCGGTTTTGGCCCAAAACCGACTCCGACCGACCGACGAACAGCCCTAATAACATCTAAGGTCTCGTTTGATAATTAACCATTCAATTTTTTGTTTTTGAAAATTATGTTTGTTTTCTCTCAATTTCTTTATCATGGTTTTCATCTTTATCAAGAACACATTTAAATTCCTAGCCAAATTCCAAATTCCAAAAACAAGTTTTTTGAAAACTTTTTTTTTTTTTTTTTTTAGTTTTCAAAAATTGGCTTGGCTTTTTTAAAAGATTGGAGGAATGTATTAGAAAAACAAAGGAACTTAATAGGTGCATGGAAGTATGTGTTTATAAACTTAATTTTCAAAAAACCAAAAACCAAATAGTTATCAAACAGACTTAGATTTAGAATTTAAAATGACAGTGGTTGATGTTAACGCTTGTGGATGCAGCATGTTGTGGTAACGCATTAATTTTCAGTGTGATTGCCTTCTTTACGCCGTGTATTTGCCTTTATACTTGCTCTTACCGATCTCGATTGAGGGGAAAATATCAACTCCAAGAAACTCCATGCAACGATTGCTGCGTTCACTTCTGGTGTTGGAGTTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAACCGTGGTTTTGACATGCATATTGGTACTCACTTTTTCTCAATCTCTTAATATATATATAGATATAGATATAGATATTCCTTTCGTATGAAAATGACGATAATAAGTGTCGTGTTCAGGTTGGCAAGAAAATGTACAAAGAAAAAGCAAAGGAGTAGAGATCCCGCCTGTGGTCGAGGGACAAATGAAACGTTGAAATTAGAAAGATTGCAGAGTATTATTAAAGCAAACAATTATGAAAAATGATTGTGTTGTTCTTGTTTTGATGTTGTGTGTGCAAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATGAATGGTGGCTTTTGAATAATACAATATATATGTACTATAATTTTACGGTTCAATTTTTTTTTTCAAGTATTTTTGAAATATCACTAGACTCAAATTCAAACGCATAAAAATGCATTCTTCAATTAAATATATATAGTGGAAGGGATTATCTTTATTAGATTTGGAATATGAAAATGTATTCTTCATTCTGCAGACTCTGTCAAAGCTTTAGATACAAAGCGAGTGTTACAATCTGAAATAATAGACCCAGGAACACCTTGCAGTCTAACAATTTCCTTTAAATACAACTGAGTTAATGCTTCAACTTTATGTATAGACTTACAAAGTAGGAAATGAACAAACTTGGTGAGCCGATCTACAATCACCCAAATCAACTCTGGGTGCTGGAGTTTTATTAAGAAAGAAAGTTCAGGCACCGCCTAATAGTGAGCGTCATGTGGGTCTGGTTGAAGAAGAGGGTCGAGAAGGAGAAGATGATGATGACTGGTCAACAAATTCACTTGCAGTGGTCGTCATCAAATTCACTTGCAGTGTTCGTCACCTCCTGTCTAGACCAGTCACTTTGATGACAGTAGTATCCTCTAGGGATGGTCACTAA

mRNA sequence

ATGGCTGGCGGTATTCCGGTGAACTCGACGAACGGAACGCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGGGATCGTGTTGTTGTACGTTTTGGTGTCCATGTGTCCCTTTTGGGCAAGCATCAGAGATCATCGATGAAGGATCAACTTCATGTTGTGGTAACGCATTAATTTTCAGTGTGATTGCCTTCTTTACGCCGTGTATTTGCCTTTATACTTGCTCTTACCGATCTCGATTGAGGGGAAAATATCAACTCCAAGAAACTCCATGCAACGATTGCTGCGTTCACTTCTGGTGTTGGAGTTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAACCGTGGTTTTGACATGCATATTGTTCAGGCACCGCCTAATAGTGAGCGTCATGTGGGTCTGGTTGAAGAAGAGGGTCGAGAAGGAGAAGATGATGATGACTGGTCAACAAATTCACTTGCAGTGGTCGTCATCAAATTCACTTGCAGTGTTCGTCACCTCCTGTCTAGACCAGTCACTTTGATGACAGTAGTATCCTCTAGGGATGGTCACTAA

Coding sequence (CDS)

ATGGCTGGCGGTATTCCGGTGAACTCGACGAACGGAACGCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGGGATCGTGTTGTTGTACGTTTTGGTGTCCATGTGTCCCTTTTGGGCAAGCATCAGAGATCATCGATGAAGGATCAACTTCATGTTGTGGTAACGCATTAATTTTCAGTGTGATTGCCTTCTTTACGCCGTGTATTTGCCTTTATACTTGCTCTTACCGATCTCGATTGAGGGGAAAATATCAACTCCAAGAAACTCCATGCAACGATTGCTGCGTTCACTTCTGGTGTTGGAGTTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAACCGTGGTTTTGACATGCATATTGTTCAGGCACCGCCTAATAGTGAGCGTCATGTGGGTCTGGTTGAAGAAGAGGGTCGAGAAGGAGAAGATGATGATGACTGGTCAACAAATTCACTTGCAGTGGTCGTCATCAAATTCACTTGCAGTGTTCGTCACCTCCTGTCTAGACCAGTCACTTTGATGACAGTAGTATCCTCTAGGGATGGTCACTAA

Protein sequence

MAGGIPVNSTNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALIFSVIAFFTPCICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFDMHIVQAPPNSERHVGLVEEEGREGEDDDDWSTNSLAVVVIKFTCSVRHLLSRPVTLMTVVSSRDGH

Homology

[Close]

BLAST of Lag0041184 vs. NCBI nr
Match: QDD67543.1 (Lsfw2.2 protein [Lagenaria siceraria])

HSP 1 Score: 258.8 bits (660), Expect = 3.5e-65
Identity = 111/122 (90.98%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 2   AGGIPVNSTNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALIF 61
           AGGIPVNS NG+PWS+GLCDCF DMGSCCCT WCPCVPFGQASEIIDEGSTSC GNALIF
Sbjct: 4   AGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIF 63

Query: 62  SVIAFFTPCICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFDM 121
            +IA FTPCICLYTCSYRSRLR KYQLQETPCNDCCVHFWCWSCAMCQEYRELK+RGFDM
Sbjct: 64  WLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDM 123

Query: 122 HI 124
           HI
Sbjct: 124 HI 125

[Close]

BLAST of Lag0041184 vs. NCBI nr
Match: XP_022942630.1 (cell number regulator 2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-63
Identity = 107/123 (86.99%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MAGGIPVNSTNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALI 60
           M+GG P+N+ NGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQA+EIIDEGSTSC G A I
Sbjct: 1   MSGGTPMNAPNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQAAEIIDEGSTSCLGQASI 60

Query: 61  FSVIAFFTPCICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFD 120
           F+VI+ FTPCICLYTC YRSRLR KYQLQETPCNDCCVHFWC  CAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSRLRAKYQLQETPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHI 124
           MHI
Sbjct: 121 MHI 123

[Close]

BLAST of Lag0041184 vs. NCBI nr
Match: KAG6599907.1 (Protein PLANT CADMIUM RESISTANCE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-63
Identity = 107/123 (86.99%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MAGGIPVNSTNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALI 60
           M+GG P+N+ NGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQA+EIIDEGSTSC G A I
Sbjct: 1   MSGGTPMNAPNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQAAEIIDEGSTSCLGQASI 60

Query: 61  FSVIAFFTPCICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFD 120
           F+VI+ FTPCICLYTC YRSRLR KYQLQETPCNDCCVHFWC  CAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSRLRAKYQLQETPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHI 124
           MHI
Sbjct: 121 MHI 123

[Close]

BLAST of Lag0041184 vs. NCBI nr
Match: XP_022942632.1 (cell number regulator 2-like isoform X5 [Cucurbita moschata])

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-63
Identity = 107/123 (86.99%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MAGGIPVNSTNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALI 60
           M+GG P+N+ NGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQA+EIIDEGSTSC G A I
Sbjct: 1   MSGGTPMNAPNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQAAEIIDEGSTSCLGQASI 60

Query: 61  FSVIAFFTPCICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFD 120
           F+VI+ FTPCICLYTC YRSRLR KYQLQETPCNDCCVHFWC  CAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSRLRAKYQLQETPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHI 124
           MHI
Sbjct: 121 MHI 123

[Close]

BLAST of Lag0041184 vs. NCBI nr
Match: XP_022942631.1 (cell number regulator 2-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-63
Identity = 107/123 (86.99%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MAGGIPVNSTNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALI 60
           M+GG P+N+ NGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQA+EIIDEGSTSC G A I
Sbjct: 1   MSGGTPMNAPNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQAAEIIDEGSTSCLGQASI 60

Query: 61  FSVIAFFTPCICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFD 120
           F+VI+ FTPCICLYTC YRSRLR KYQLQETPCNDCCVHFWC  CAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSRLRAKYQLQETPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHI 124
           MHI
Sbjct: 121 MHI 123

[Close]

BLAST of Lag0041184 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.3e-37
Identity = 63/109 (57.80%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 15  WSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALIFSVIAFFTPCICLY 74
           WSTGLC+CFDD  +CC T  CPC+ FGQ +EIID GSTSC  +  +++++   T C C+Y
Sbjct: 47  WSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGSTSCGTSGALYALVMLLTGCQCVY 106

Query: 75  TCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFDMHI 124
           +C YR+++R +Y LQ +PC+DCCVH  C  CA+CQEYRELK RGFDM I
Sbjct: 107 SCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCALCQEYRELKKRGFDMSI 155

[Close]

BLAST of Lag0041184 vs. ExPASy Swiss-Prot
Match: D9HP26 (Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.1e-35
Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 4   GIPVNS-TNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALIFS 63
           G PV      + WS+GL DCFDD G CC T WCPC+ FG+ +EI+D G+TSC     +++
Sbjct: 19  GFPVGGPAASSQWSSGLLDCFDDCGLCCLTCWCPCITFGRVAEIVDRGATSCGTAGALYA 78

Query: 64  VIAFFTPCICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFD 121
           V+A+FT C  +Y+C+YR+++R +  L ETPC DC VHF C  CA+CQ+Y+ELK RGFD
Sbjct: 79  VLAYFTGCQWIYSCTYRAKMRAQLGLPETPCCDCLVHFCCEPCALCQQYKELKARGFD 136

[Close]

BLAST of Lag0041184 vs. ExPASy Swiss-Prot
Match: Q9LQU4 (Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.6e-34
Identity = 56/109 (51.38%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 15  WSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALIFSVIAFFTPCICLY 74
           WSTG CDCF D  +CC TFWCPC+ FGQ +EI+D GSTSC     ++++IA  T C C+Y
Sbjct: 16  WSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIY 75

Query: 75  TCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFDMHI 124
           +C YR ++R +Y ++   C DC  HF C  C++ Q+YRELK+RG+DM +
Sbjct: 76  SCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSL 124

[Close]

BLAST of Lag0041184 vs. ExPASy Swiss-Prot
Match: D9HP20 (Cell number regulator 4 OS=Zea mays OX=4577 GN=CNR4 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.7e-33
Identity = 60/117 (51.28%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 15  WSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNALIFSVI----AFFTPC 74
           W+TGLC CF D  SCC +F CPC+PFGQ +E++D+G TSC    L++ ++        PC
Sbjct: 11  WTTGLCGCFSDCKSCCLSFLCPCIPFGQVAEVLDKGMTSCGLAGLLYCLLLHAGVAVVPC 70

Query: 75  ICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNRGFDMHIVQAP 128
            C+YTC+YR +LR  Y L   PC DCCVH WC  CA+ Q YRELKNRG D  + + P
Sbjct: 71  HCIYTCTYRRKLRAAYDLPPEPCADCCVHMWCGPCAISQMYRELKNRGADPAMGRQP 127

[Close]

BLAST of Lag0041184 vs. ExPASy Swiss-Prot
Match: D9HP23 (Cell number regulator 7 OS=Zea mays OX=4577 GN=CNR7 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.7e-33
Identity = 61/123 (49.59%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 4   GIPVNSTN----GTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQASEIIDEGSTSCCGNAL 63
           GIP++S       + WS+GLC CFDD G CC T WCPCV FG+ +E++D G+TSC     
Sbjct: 25  GIPISSPGPAVAASQWSSGLCACFDDCGLCCMTCWCPCVTFGRIAEVVDRGATSCAAAGA 84

Query: 64  IFSVIAFFT--PCICLYTCSYRSRLRGKYQLQETPCNDCCVHFWCWSCAMCQEYRELKNR 121
           I++++A FT   C  +Y+C+YRS++R +  L +  C DCCVHF C  CA+CQ+YREL+ R
Sbjct: 85  IYTLLACFTGFQCHWIYSCTYRSKMRAQLGLPDVGCCDCCVHFCCEPCALCQQYRELRAR 144

The following BLAST results are available for this feature:

BLAST of Lag0041184 vs. NCBI nr


Match Name	E-value	Identity	Description
QDD67543.1	3.5e-65	90.98	Lsfw2.2 protein [Lagenaria siceraria]	[more]
XP_022942630.1	2.5e-63	86.99	cell number regulator 2-like isoform X3 [Cucurbita moschata]	[more]
KAG6599907.1	2.5e-63	86.99	Protein PLANT CADMIUM RESISTANCE 2, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022942632.1	2.5e-63	86.99	cell number regulator 2-like isoform X5 [Cucurbita moschata]	[more]
XP_022942631.1	2.5e-63	86.99	cell number regulator 2-like isoform X4 [Cucurbita moschata]	[more]

BLAST of Lag0041184 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6TYV8	9.3e-37	57.80	Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1	[more]
D9HP26	5.1e-35	52.54	Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1	[more]
Q9LQU4	9.6e-34	51.38	Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 ...	[more]
D9HP20	3.7e-33	51.28	Cell number regulator 4 OS=Zea mays OX=4577 GN=CNR4 PE=2 SV=1	[more]
D9HP23	3.7e-33	49.59	Cell number regulator 7 OS=Zea mays OX=4577 GN=CNR7 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 15..113 e-value: 1.0E-26 score: 93.6
IPR006461	PLAC8 motif-containing protein	TIGRFAM	TIGR01571	TIGR01571	coord: 14..116 e-value: 1.3E-31 score: 107.4
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	DUF614 FAMILY PROTEIN-RELATED	coord: 11..123
None	No IPR available	PANTHER	PTHR15907:SF182	PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED	coord: 11..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041184.1	Lag0041184.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane