Lag0041112 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041112
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein DETOXIFICATION
Location	chr13: 12231956 .. 12233402 (+)
RNA-Seq Expression	Lag0041112
Synteny	Lag0041112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAACTCTACTATCTATCCTCTGCTTTCCCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGCTTGCTGACTTAAGCATCGGAGCCGGTGTGGCGAGCACCACACCGGTGTGCAGATTACTGTCTTGCAGGCCACGTGTCTTCCCCCTCATCTACAAATTTACCTTTGGTGGCACGTGAAGGTCAAGTGAGATCCTCTGGCCAAAATCGACCATCAACACCTACTAGTTCCTTGATCGATCCCTCCAAAAAAATCAAATTTGTTCTTACATGAGAATGTTAGAATCATAGCTTTACTCCAATAATTGTAGTTGCTTGCACCTAATAGCTGTTGCGTGACGAGAACACATTTGCATATCTGTAGTATGATGAGAGAAACCGATTTCATTTTATTTCTATAATATATTATCTCTTCTTTAAATAAGAAGGTAGAAATAAGTAAAAGACTATCCTGCCCTTGACTAATAGAATAATAAATACAATCAACAAAATAAAACTAATTAACAAATACAACCATAAAACTAAGAGATATGGACGAAGTAATAATAAATATCATTTTTGTTTAAAAACCTTTTAAGAACTTTTTGTCTCAAATGCCAAGCTATCTTAGGTCAGACCCCATCAGGATTAAAGTGGGCATATTGAAAATGTAATGATTAATATAAAATTAAGCCTATAAACACTATTCTTACCGACAAAATGGTTTGACATTATGATGAAACAAGTAGATTCTCTCTTAAGAGTGACTATAGACTCTTCCAAAAAATTAAACTGGATGGTATATCTGCTAGTAATAACGAAAGAATTTGGAATAGTGTTTGGAAATTAAGAATACCATCTCAAATTATTTTTTATTTTTTATTTTTTTTGTGTGGAAAGCTCTTAAAGAATCTCTTCATATAATAATTTTAATCTTCAACATAGAGGAATTAACATTTCTAATCTTTGCCCTATTTGTGACTCCCAAATTGAAAACACTGATTATTGTCTATTCAATTGCTTTAGAGCTAAAGATATCTGGAATCTAACCTTTAGTAATGTTTTTTTGGAGGAGGAGTTCTTCGGGAGCTTCATCGACAGATGGATTAGGATCGAATCGTCTCTATCTCGCGAGGAGCTTGAGTTGGTAGTAGTCACATGTTGGACGATTTGGTGCGACAAAAACAAACTGGTCCACGACGAAGCAATCTCCCCCGTTTTAATCAAGATTAGATGGATTAAACATTATATTGAATCATTCAAAAAGGCTAATTCCAGAAGAGATCCAAACCGTGAGTCCAATCGATCTAGAGATTCACACCATGGAAACCTTACCCGTTGGATTCCTCCCTCTGAAGATGTCTGGAAGTTAAATGTTGATGCTGCATTGTTGAGGATCCCACATTGA

mRNA sequence

ATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAACTCTACTATCTATCCTCTGCTTTCCCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGCTTGCTGACTTAAGCATCGGAGCCGGTGTGGCGAGCACCACACCGGTGTGCAGATTACTGTCTTGCAGGCCACGTGTCTTCCCCCTCATCTACAAATTTACCTTTGGTGGCACAGCTAAAGATATCTGGAATCTAACCTTTAGTAATGTTTTTTTGGAGGAGGAGTTCTTCGGGAGCTTCATCGACAGATGGATTAGGATCGAATCGTCTCTATCTCGCGAGGAGCTTGAGTTGGTAGTAGTCACATGTTGGACGATTTGGTGCGACAAAAACAAACTGGTCCACGACGAAGCAATCTCCCCCGTTTTAATCAAGATTAGATGGATTAAACATTATATTGAATCATTCAAAAAGGCTAATTCCAGAAGAGATCCAAACCGTGAGTCCAATCGATCTAGAGATTCACACCATGGAAACCTTACCCGTTGGATTCCTCCCTCTGAAGATGTCTGGAAGTTAAATGTTGATGCTGCATTGTTGAGGATCCCACATTGA

Coding sequence (CDS)

ATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAACTCTACTATCTATCCTCTGCTTTCCCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGCTTGCTGACTTAAGCATCGGAGCCGGTGTGGCGAGCACCACACCGGTGTGCAGATTACTGTCTTGCAGGCCACGTGTCTTCCCCCTCATCTACAAATTTACCTTTGGTGGCACAGCTAAAGATATCTGGAATCTAACCTTTAGTAATGTTTTTTTGGAGGAGGAGTTCTTCGGGAGCTTCATCGACAGATGGATTAGGATCGAATCGTCTCTATCTCGCGAGGAGCTTGAGTTGGTAGTAGTCACATGTTGGACGATTTGGTGCGACAAAAACAAACTGGTCCACGACGAAGCAATCTCCCCCGTTTTAATCAAGATTAGATGGATTAAACATTATATTGAATCATTCAAAAAGGCTAATTCCAGAAGAGATCCAAACCGTGAGTCCAATCGATCTAGAGATTCACACCATGGAAACCTTACCCGTTGGATTCCTCCCTCTGAAGATGTCTGGAAGTTAAATGTTGATGCTGCATTGTTGAGGATCCCACATTGA

Protein sequence

MSRYLYPSSPLKRGSRILSLNSTIYPLLSPLALTFPRPTVLLADLSIGAGVASTTPVCRLLSCRPRVFPLIYKFTFGGTAKDIWNLTFSNVFLEEEFFGSFIDRWIRIESSLSREELELVVVTCWTIWCDKNKLVHDEAISPVLIKIRWIKHYIESFKKANSRRDPNRESNRSRDSHHGNLTRWIPPSEDVWKLNVDAALLRIPH

Homology

[Close]

BLAST of Lag0041112 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-10
Identity = 45/145 (31.03%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 56   PVCRLLSCRPRVFPLIYKFTFGGTAKDIWNLTFSNV-FLEEEFFGSFIDRWIRIESSLSR 115
            P C +  C  R   +I+ F     A+ IW   F  +  L  E   SF++ W  +   L  
Sbjct: 1171 PACTI--CGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEP 1230

Query: 116  EELELVVVTCWTIWCDKNKLVHDEAISPVLIKIRWIKHYIESFKKANSRRDPNRESNRSR 175
            ++L L  +T W IW D+N L+H + +SPV  K  W+  +++S    +S+   +  S R++
Sbjct: 1231 KDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDS----HSQAQMSNYSPRTQ 1290

Query: 176  DSHHGNLTRWIPPSEDVWKLNVDAA 200
             +H   +  W P S    KLN DAA
Sbjct: 1291 SNHRPVVQYWRPSSSVSLKLNTDAA 1309

[Close]

BLAST of Lag0041112 vs. NCBI nr
Match: XP_030931239.1 (uncharacterized protein LOC115957159 [Quercus lobata])

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-05
Identity = 39/129 (30.23%), Postives = 62/129 (48.06%), Query Frame = 0


Query: 80  AKDIWN---LTFSNV------FLEEEFFGSFIDRWIRIESSLSREELELVVVTCWTIWCD 139
           AK++WN   L   +V      FL+  ++G    +W       S E++ L+V+T W IW +
Sbjct: 32  AKEVWNEVGLAKDHVMDSCPEFLDLLWYGCNFKKW-------SEEDIGLMVMTAWGIWTN 91

Query: 140 KNKLVHDEAISPVLIKIRWIKHYIESFKKANSRRDPNRESNRSRDSHHGNLTRWIPPSED 199
            N++ H  +  P  I+ RW K+Y+E +  AN    P RES  +          W  P   
Sbjct: 92  WNEVRHGRSRKPATIRARWTKNYLEQYLTANHEVQPYRESVEA---------VWQLPKPP 144

[Close]

BLAST of Lag0041112 vs. NCBI nr
Match: XP_030939482.1 (uncharacterized protein LOC115964280 [Quercus lobata])

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-05
Identity = 42/146 (28.77%), Postives = 67/146 (45.89%), Query Frame = 0


Query: 59  RLLSCRPRVFPLIYKFTFGGTAKDIWNLTFSNVFLEEEFFG--SFIDRWIRIESSLSREE 118
           R  +C+      I+     G A+DIW     +  L++   G    +  W  +   L+ +E
Sbjct: 72  RCKACKTEPETEIHALWNCGVAQDIW--AGCSARLQKCHVGPEDMLQLWEELMVKLTFDE 131

Query: 119 LELVVVTCWTIWCDKNKLVHDEAISPVLIKIRWIKHYIESFKKANSRRDPNRESNRSRDS 178
           LEL +V  W IW  +N L+H + +    I  R  + Y+  F+ A+SR      S+     
Sbjct: 132 LELFLVQAWLIWNQRNALIHGKQLQEPGILNRRAEDYLAEFRHAHSRLVTTPPSS----- 191

Query: 179 HHGNLTRWIPPSEDVWKLNVDAALLR 203
              NL  W PP  + +KLN DAA+ +
Sbjct: 192 ---NLISWRPPPPNRFKLNFDAAIFK 207

[Close]

BLAST of Lag0041112 vs. NCBI nr
Match: XP_030498069.1 (uncharacterized protein LOC115713727 [Cannabis sativa])

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-05
Identity = 28/98 (28.57%), Postives = 50/98 (51.02%), Query Frame = 0


Query: 103 DRWIRIESSLSREELELVVVTCWTIWCDKNKLVHDEAISPVLIKIRWIKHYIESFKKANS 162
           D  + + +  + +E+E +V T W+IW ++N++VH  +  P  I   +  +Y+ +F+ A  
Sbjct: 17  DYLVHLSTIYTTQEMEQIVCTLWSIWTERNRVVHGSSAKPASILASFAVNYLSNFRSATK 76

Query: 163 RRDPNRESNRSRDSHHGNLTRWIPPSEDVWKLNVDAAL 201
           +      S     +      +W PP+    KLNVDAAL
Sbjct: 77  KYHTAATSAHPLPTSVPGAAKWTPPTGLNLKLNVDAAL 114

[Close]

BLAST of Lag0041112 vs. NCBI nr
Match: XP_024190234.1 (uncharacterized protein LOC112194221 [Rosa chinensis])

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-05
Identity = 36/124 (29.03%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 80   AKDIWNLTFSNVFLEEEFFGSFIDRWIRIESSLSREELELVVVTCWTIWCDKNKLVHDEA 139
            +K +W  +F N   ++    SFID +  +  + S+EE+EL  V CW +W  +N+  H+  
Sbjct: 960  SKKVWKFSFLNGVYKQWREPSFIDLFAHVVKTSSKEEVELFSVICWLLWKSRNRFKHEGV 1019

Query: 140  ISPVLIKIRWIKHYIESFKK-ANSRRDPNRES-NRSRDSHHGNL-TRWIPPSEDVWKLNV 199
            +          KH + S  +  N+ +D  R + N ++D+    +  +W PP+    KLN 
Sbjct: 1020 VEE-------SKHIVWSANEWLNNFQDAQRSNENVTKDATQKRVKVKWRPPTAPKLKLNT 1076

Query: 200  DAAL 201
            DAA+
Sbjct: 1080 DAAI 1076

[Close]

BLAST of Lag0041112 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 45/145 (31.03%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 56   PVCRLLSCRPRVFPLIYKFTFGGTAKDIWNLTFSNV-FLEEEFFGSFIDRWIRIESSLSR 115
            P C +  C  R   +I+ F     A+ IW   F  +  L  E   SF++ W  +   L  
Sbjct: 1171 PACTI--CGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEP 1230

Query: 116  EELELVVVTCWTIWCDKNKLVHDEAISPVLIKIRWIKHYIESFKKANSRRDPNRESNRSR 175
            ++L L  +T W IW D+N L+H + +SPV  K  W+  +++S    +S+   +  S R++
Sbjct: 1231 KDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDS----HSQAQMSNYSPRTQ 1290

Query: 176  DSHHGNLTRWIPPSEDVWKLNVDAA 200
             +H   +  W P S    KLN DAA
Sbjct: 1291 SNHRPVVQYWRPSSSVSLKLNTDAA 1309

[Close]

BLAST of Lag0041112 vs. ExPASy TrEMBL
Match: A0A803NW04 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-05
Identity = 39/137 (28.47%), Postives = 61/137 (44.53%), Query Frame = 0


Query: 80   AKDIWNLTFSNVFLEEEFFGSFIDRWIRIESSLSREELELVVVTCWTIWCDKNKLVHDEA 139
            AKDIWN     +   +    +  D    + + LS+EE EL++   W IW D+NK++H + 
Sbjct: 927  AKDIWNQFHFPIDFAKARHLANGDYLFHLATLLSQEEFELLLCIMWVIWIDRNKIIHGDM 986

Query: 140  ISPVLIKIRWIKHYIESFKKANSRRDPN------RESNRSRDSHHGNLTR---------- 199
                     +   Y+ ++ KANS + P         +N S  +   N+            
Sbjct: 987  NKDATAMALYAITYMNNYIKANSTKPPTATLSSPSAANPSHTATDANVAAMKARPTAGVP 1046

Query: 200  WIPPSEDVWKLNVDAAL 201
            W PP  +  KLNVDAA+
Sbjct: 1047 WTPPLLNKLKLNVDAAI 1063

[Close]

BLAST of Lag0041112 vs. ExPASy TrEMBL
Match: A0A6J1DZK3 (uncharacterized protein LOC111024968 OS=Momordica charantia OX=3673 GN=LOC111024968 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.3e-05
Identity = 31/94 (32.98%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 111 SLSREELELVVVTCWTIWCDKNKLVHDEAISPVLIKIRWIKHYIE----SFKKANSRRDP 170
           +LS  EL L  +TCW +W D++ L++ + I   LIK+ WI  Y E     +     RR P
Sbjct: 3   NLSTSELRLTGITCWALWNDRDALINKKKIPEALIKVEWILKYAEEVRMKYHNGMKRRIP 62

Query: 171 NRESNRSRDSHHGNLTRWIPPSEDVWKLNVDAAL 201
                         +  W PP   V K+N DAA+
Sbjct: 63  -------------RVNEWRPPLGGVVKMNTDAAV 83

[Close]

BLAST of Lag0041112 vs. ExPASy TrEMBL
Match: A0A803PLC1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.2e-05
Identity = 27/98 (27.55%), Postives = 50/98 (51.02%), Query Frame = 0


Query: 103 DRWIRIESSLSREELELVVVTCWTIWCDKNKLVHDEAISPVLIKIRWIKHYIESFKKANS 162
           D  + + +  +++E+E +V T W+IW ++N++VH  +  P      +  +Y+ +F+ A  
Sbjct: 17  DYLVHLSTIYTKQEMEQIVCTLWSIWTERNRVVHGSSAKPASFLASFAVNYLSNFRSATR 76

Query: 163 RRDPNRESNRSRDSHHGNLTRWIPPSEDVWKLNVDAAL 201
           +      S     +      +W PP+    KLNVDAAL
Sbjct: 77  KYHTVSTSASPMPTLVQGAAKWTPPTGLNLKLNVDAAL 114

[Close]

BLAST of Lag0041112 vs. ExPASy TrEMBL
Match: A0A803PE40 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.2e-05
Identity = 36/102 (35.29%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 103  DRWIRIESSLSREELELVVVTCWTIWCDKNKLVHDEAISPVLIKIRWIKHYIESFKKANS 162
            D    + + LS++ELELV V  W IW D+NK+ H E+    +    +  +Y+E++ KAN+
Sbjct: 911  DYIFHLATLLSQQELELVFVIMWVIWTDRNKINHGESRRDGMALANYATNYMENYHKANN 970

Query: 163  R----RDPNRESNRSRDSHHGNLTRWIPPSEDVWKLNVDAAL 201
            R     +P   +  S     G    W PP     KLNVDAA+
Sbjct: 971  RPTAVTEPVTPAQISTLPTEG--IPWKPPDMYGLKLNVDAAV 1010

The following BLAST results are available for this feature:

BLAST of Lag0041112 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158377.1	6.0e-10	31.03	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_030931239.1	1.2e-05	30.23	uncharacterized protein LOC115957159 [Quercus lobata]	[more]
XP_030939482.1	1.5e-05	28.77	uncharacterized protein LOC115964280 [Quercus lobata]	[more]
XP_030498069.1	4.5e-05	28.57	uncharacterized protein LOC115713727 [Cannabis sativa]	[more]
XP_024190234.1	4.5e-05	29.03	uncharacterized protein LOC112194221 [Rosa chinensis]	[more]

BLAST of Lag0041112 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0041112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX30	2.9e-10	31.03	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A803NW04	2.2e-05	28.47	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1DZK3	6.3e-05	32.98	uncharacterized protein LOC111024968 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A803PLC1	8.2e-05	27.55	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803PE40	8.2e-05	35.29	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lag0041112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041112.1	Lag0041112.1	mRNA