
Lag0041049 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCTGGCTCTTCTTCTTCAATGAAATGGGGTTCTGAAAATGGCTATCAACCCCATGTTCTTGCTGTTGATGATAATATTGTCGATCGTAAACTTGTAGAGAAGTTGCTCAAAAACTCCTCTTGTAAAGGTATGTTCTTATTTTATGCTCGTTCGGTTTGATAACCATTTTTTTTTTTTTTTTTTTAGTTTTTGAAAATTAAGCCTATAAAGTATAAACAGTACTCATGGTCTCCATAAATTTATTTGCTTTGTTGTTTACTCTCTTTTCATGTTTTAAAAGATTAAGTCAGATTCTAAAAACTAAGAATTCAATGTGTGTATAAAAGGTGAAAAGTAAAGTGAAAAGTAAAGAAATTTGAAGAAAAGAATATAATTTTCAAAAACCAACCTTAGTTTTTCAACTTTGAATATTGAAATTTAAACTTTTGAAACAAAGGTTGTTTAATTTTGAATTTAAAAAAAAAGAACCATCTTGATATAGATTTGAACCTTTGATCTTTTAGTCGAGTTTATAATACAATAGATTTAAAAATTTAAGAGACTTGAATGATTATGCAAATGAGATTATTGTTTCTTTCTGTGTTGAAATGGGTTTCTGTTTGGCAGCCCAGAAAATTCTCTGGTGTGCTGAAAACAAAGTTTGAGAATCTGGGAAAGGAAAATAATATAAAAAAAAAAATCCTTTTTTTTTTTTTTTTTCAAAATTAAATTTTGTGCAGTAACGACAGCAGAAAATGGTCGCAGTGCTTTGGAGTTCTTGGGTTTGTTGGATGATCATCAACACAACAACTTAGAATGCACCAATGTAAGTCAACCCCAAAAATTCAAAAATTCAAAAAAGAACAAAAAAAAAAAAAAAAAACAAAAAATCCTGTTTGTTTAGTGAGAAAACGAAGGAAAATTCCCCAGAAAAATTTGATGTGTTTAATGGAAAAACATTTATGTTTTGTGTTTGCAGAGGTCGAAGGTGAACATGATTATCACAGATTATTGCATGCCAGGAATGTCTGGATACGAACTTCTCAAGAAAATCAAGGTTTTCTATTTTTATTTTATTCAAAATAAACCAAAATTGTTTTTTTTTTTTTAAATTATATCTTTTTTTATTATTTTTTATTTTTTGTTGCAGAGATGTTCGAGGATGAAGGAAGTTCCTGTGGTGATTGTATCGTCGGAAAACGTGCCCACTCGCATTAACAAGTTAATAAAAATTTCTTCTTCTTTTGGTTCGTTACATTACAAAACTTTGTTTTTGCTTTTATTTTTCTTTTTTAATTTTTTAAGCTCGATAAATATGCAACCTGATCGAGAAGATGAGATATATTTTAACTAGTTGAGTTATGTTCTAAGTTTACTATATAAAAAATCTTGTTAAGTGAACCGTTTTATAAGAAAATTTGTTAAATGTTTTATCGATAACCTCATGTATTTTATCTCTTTTATTAAGGGTCGATTTGAAATATACTTTTTAGTTCAAGTTTTTTGTTTTAAAAAAAGGTTTTTAATAGATTCTTGAACTTTTATTTGGTATTTATACTTTTGAAACTTTCTAATATGTCGACTAATTTTTAATGTTGTGTAAAATGGTCCCTCTAATTAACTCTATCAATTTATTGCTTACATGAACTAGTTCTACGTAAGTTATATTTAAGGGCGTAAATAAACAAAGATTTATTGAACATAAAAGTTGAAAAATAAACACAATTTTAAGATCATTCAAAATCTTTTTAAATTATAACCAAAATTGTAAATATGATTTTTTTTTCTTTTGTTTCTACTTTGATCTAAAACACTTTTGTAATTCTTTTTTGTTTTGTTTTTTTATTTTTTTGGTTAGGTGTTTGGAGGAGGGAGCAGAAATGTTCATGCTGAAACCTTTGAAGCAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA ATGGAGTCTGGCTCTTCTTCTTCAATGAAATGGGGTTCTGAAAATGGCTATCAACCCCATGTTCTTGCTGTTGATGATAATATTGTCGATCGTAAACTTGTAGAGAAGTTGCTCAAAAACTCCTCTTGTAAAGTAACGACAGCAGAAAATGGTCGCAGTGCTTTGGAGTTCTTGGGTTTGTTGGATGATCATCAACACAACAACTTAGAATGCACCAATAGGTCGAAGGTGAACATGATTATCACAGATTATTGCATGCCAGGAATGTCTGGATACGAACTTCTCAAGAAAATCAAGAGATGTTCGAGGATGAAGGAAGTTCCTGTGGTGATTGTATCGTCGGAAAACGTGCCCACTCGCATTAACAAGTGTTTGGAGGAGGGAGCAGAAATGTTCATGCTGAAACCTTTGAAGCAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA ATGGAGTCTGGCTCTTCTTCTTCAATGAAATGGGGTTCTGAAAATGGCTATCAACCCCATGTTCTTGCTGTTGATGATAATATTGTCGATCGTAAACTTGTAGAGAAGTTGCTCAAAAACTCCTCTTGTAAAGTAACGACAGCAGAAAATGGTCGCAGTGCTTTGGAGTTCTTGGGTTTGTTGGATGATCATCAACACAACAACTTAGAATGCACCAATAGGTCGAAGGTGAACATGATTATCACAGATTATTGCATGCCAGGAATGTCTGGATACGAACTTCTCAAGAAAATCAAGAGATGTTCGAGGATGAAGGAAGTTCCTGTGGTGATTGTATCGTCGGAAAACGTGCCCACTCGCATTAACAAGTGTTTGGAGGAGGGAGCAGAAATGTTCATGCTGAAACCTTTGAAGCAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA MESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNLECTNRSKVNMIITDYCMPGMSGYELLKKIKRCSRMKEVPVVIVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQLMN Homology
BLAST of Lag0041049 vs. NCBI nr
Match: XP_038893219.1 (two-component response regulator ARR17-like [Benincasa hispida]) HSP 1 Score: 265.4 bits (677), Expect = 3.0e-67 Identity = 132/148 (89.19%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of Lag0041049 vs. NCBI nr
Match: XP_023553887.1 (two-component response regulator ARR17-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66 Identity = 134/152 (88.16%), Postives = 142/152 (93.42%), Query Frame = 0
BLAST of Lag0041049 vs. NCBI nr
Match: XP_031741127.1 (two-component response regulator ARR17 isoform X2 [Cucumis sativus]) HSP 1 Score: 261.9 bits (668), Expect = 3.3e-66 Identity = 134/153 (87.58%), Postives = 139/153 (90.85%), Query Frame = 0
BLAST of Lag0041049 vs. NCBI nr
Match: XP_004146434.1 (two-component response regulator ARR17 isoform X1 [Cucumis sativus] >KGN50743.1 hypothetical protein Csa_005849 [Cucumis sativus]) HSP 1 Score: 261.5 bits (667), Expect = 4.4e-66 Identity = 134/154 (87.01%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Lag0041049 vs. NCBI nr
Match: KAG6599939.1 (Two-component response regulator ARR17, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261.2 bits (666), Expect = 5.7e-66 Identity = 133/152 (87.50%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of Lag0041049 vs. ExPASy Swiss-Prot
Match: Q9FPR6 (Two-component response regulator ARR17 OS=Arabidopsis thaliana OX=3702 GN=ARR17 PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.9e-48 Identity = 101/149 (67.79%), Postives = 119/149 (79.87%), Query Frame = 0
BLAST of Lag0041049 vs. ExPASy Swiss-Prot
Match: Q9SHC2 (Two-component response regulator ARR16 OS=Arabidopsis thaliana OX=3702 GN=ARR16 PE=1 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 4.7e-47 Identity = 92/132 (69.70%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of Lag0041049 vs. ExPASy Swiss-Prot
Match: O80365 (Two-component response regulator ARR8 OS=Arabidopsis thaliana OX=3702 GN=ARR8 PE=1 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 8.1e-39 Identity = 78/136 (57.35%), Postives = 106/136 (77.94%), Query Frame = 0
BLAST of Lag0041049 vs. ExPASy Swiss-Prot
Match: Q4GZK7 (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.4e-38 Identity = 79/137 (57.66%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of Lag0041049 vs. ExPASy Swiss-Prot
Match: Q942A1 (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 GN=RR4 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.4e-38 Identity = 79/137 (57.66%), Postives = 106/137 (77.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|