Lag0041013 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041013
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	S1-like domain-containing protein
Location	chr13: 10788225 .. 10790745 (+)
RNA-Seq Expression	Lag0041013
Synteny	Lag0041013

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAACATATTGTAAGCCTTGAAGATGGTCATAGCATTATGCAGGTTATCTCAATCCGTGGTTCCAATTTAATTGAGGTATCTTCCTCTTTCATCTCTGTACATTCTGATTTCTACTTCTTTGCTTACTCTTCCTCAAAGTTAATTATTTACTTTACAATCTACCGCTTCTGCTATTGCCTATTGCGTTGTATCAATCGACCTGAATTAGAAACTTCTCTGATTGCAGTTAATTATTGACTGATTCTTTGTTCTAAAAAATTAAGGCTGGTTTGATAACCAGTTGGTTCTTAAAAATTTAGACTACTTCCACATATAAGTTTATTTGTTTTGTTATCTACTCATTCTCTTGGCTTTTTCAAATTTTGAGAACTAAAAAAATAGTTTTGAAAAACAAGTCAAGTTTTGGCTAAGAATTCAAACGTGTTCTTAACAAAGAAAAAAATATTGTAAGGGAATTGGGAGAAAACAAGCATAATTTTAAAAAATCAAATGGTTATCAAACGGGGTCTAAAATGAAAAGTTTTAACTTTTGACACGTTAGAATATGAGGTGACATTGTGTGTCATAGATATTTCCAAACTAGATATCAATTGTTCTGATACGAAAATCACACTTCTCTAGAAATTTATATCACTCATTCTGATTAAGCATTGGTATGGAAACCAATATTTGTGCAGTTTCTCAGTTTGTAAAACATATATTTGCCAATTATTATTATTTTTATTTTTGTAGGAAACAGAGATATTATTTGCCCATCATTTGAATTAGTTTGCTTTTGTATTTTGGAAAATATCTGATACAAATTCAAATTGTATTCCTTCATCATCTCTAGGTAATGGATGCACAAGGTGAGAAATCGCTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGTATGTTCTATCTATACCCATGCTACTAAATTTTCCCATCACATTAAAGTTTCTTCTTTTAATTTTTAGAAAAAAGAAGAGATCCCTCTGCACATTTGCCTTCTCTGTGAACTTCTGGAAACTATGCTATTTCAGTGTTCTTGAAATTCATAAAACATAGAGATTGATCTAGATTGTTTTGGATAATTTGTTAGGATCCCAATCTTAAGAAAACATACTGAAATTGCATTACTATATAAAATATATAAAAGAGAGATCACACTGGTAATAACTAATAGCTTTTCGAGAGGGCTATCAATCCACAATCGACTGATTTTCCAAAATTCTGTTCAACTTATAAACTTCCTAAATCCTACTATTTATAAACTAACTCACATACTGACAAGTAATTACGATTATGCCACAATTAATATTACTAGTAATTCTCTAACATAATTTTATTTCCGGCATTTACTGAATGCTTTTGAAGTCTTGGAAAAAAGTATTTGAAAGAAGTGTTGTTTGCTTTGCCATCACGGCAGGGAGTTTCGTTGTAGTTGATGAAAGTGGAAAGAAGACTGCTCTTGAATCTGGAAGCAAGGTGGCATGCATTGTTTCTCGAGTTCTATATTTTGAACAAGTTCGCGAGCTTCAAAAATCCCCAGAATGGTATGTTATATCAAATTTCAACTTATTCATTAAAATGGTTTAGGTATTGCTCAGTAAATTTAGGTTAATTCCATTAACTGAAGCATAGATTTATTTTCCCTCAAATACAAGTTTTCCCTTATGATCAATTATCAAACAGCTGTTTCTCCACTACTATTTAGAAGCATCAAAATAACCTCGTTTGTTTTTAAGTTTCAAAGTGAGCATAGCTCAGTTGTAATTGACATATGTCCATTCCCTCAAGGTCGGAGGTTCAAATCCCTTAACCCCACTTTGTTGTACTAAAAGAAAAACTTTGTTTTTAACTTGAATATTTACAACTGTTGGGGAAAAAGTGAAGCAGATGGAAAATTTAGATCATTGAAATTGGACAAAGATAAACAACCAAACATGAATGCAACACTCCAATTTCTATTGTATCATGCATGAGAAAGATAGCTCGTCGGTATCTCCTGTTTCTAGTGCTTGTCGTCGTGCTCGATGCTTATGAGTGCAAGCTGAAACTGAAAAAACTGACTAGTTCGATGGATTTTAACTCTTTGTTTGATGATTTTGTTTTCTAAAGTATGAAACTAAGGACTACATTTAGTTTGACAGTTTTGTTAGGTGGTCGATGCGATTTTTAGAAAATTGGTTTCATGACAGCCTCTTTTTTCCCTTACACTGATAGGATCAATTTGATGTCGGACTTAACTGATTCACTTACCTCCCTTTATTCTACAATGTATTGCAGGCCACAAGTCTTCAAGAATGCGATCACGGTTGATCGAAACGAAAATCTTCAGGCACGGAATAATCAACCAGAAGAGGATGAGGTCGACTCGAGTGAAGATGATGGTCTTCCTCCTCTAGAAGCCAACACAAACAGAACTAAGCCATTAATATTACAACCAGATGCAGAATCAGAATCTGATTCAGATTCTTAA

mRNA sequence

ATGAAGGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAACATATTGTAAGCCTTGAAGATGGTCATAGCATTATGCAGGTTATCTCAATCCGTGGTTCCAATTTAATTGAGGTAATGGATGCACAAGGTGAGAAATCGCTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGGAGTTTCGTTGTAGTTGATGAAAGTGGAAAGAAGACTGCTCTTGAATCTGGAAGCAAGGTGGCATGCATTGTTTCTCGAGTTCTATATTTTGAACAAGTTCGCGAGCTTCAAAAATCCCCAGAATGGCCACAAGTCTTCAAGAATGCGATCACGGTTGATCGAAACGAAAATCTTCAGGCACGGAATAATCAACCAGAAGAGGATGAGGTCGACTCGAGTGAAGATGATGGTCTTCCTCCTCTAGAAGCCAACACAAACAGAACTAAGCCATTAATATTACAACCAGATGCAGAATCAGAATCTGATTCAGATTCTTAA

Coding sequence (CDS)

ATGAAGGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAACATATTGTAAGCCTTGAAGATGGTCATAGCATTATGCAGGTTATCTCAATCCGTGGTTCCAATTTAATTGAGGTAATGGATGCACAAGGTGAGAAATCGCTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGGAGTTTCGTTGTAGTTGATGAAAGTGGAAAGAAGACTGCTCTTGAATCTGGAAGCAAGGTGGCATGCATTGTTTCTCGAGTTCTATATTTTGAACAAGTTCGCGAGCTTCAAAAATCCCCAGAATGGCCACAAGTCTTCAAGAATGCGATCACGGTTGATCGAAACGAAAATCTTCAGGCACGGAATAATCAACCAGAAGAGGATGAGGTCGACTCGAGTGAAGATGATGGTCTTCCTCCTCTAGAAGCCAACACAAACAGAACTAAGCCATTAATATTACAACCAGATGCAGAATCAGAATCTGATTCAGATTCTTAA

Protein sequence

MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNENLQARNNQPEEDEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS

Homology

[Close]

BLAST of Lag0041013 vs. NCBI nr
Match: XP_004146450.1 (probable RNA-binding protein EIF1AD [Cucumis sativus] >KGN50715.1 hypothetical protein Csa_005860 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 3.9e-79
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HI SLEDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQ+RELQKSPEWP++FKNAI  DRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120

Query: 121 NLQARNNQPEEDEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQA+NNQP EDEV+SS+DDGLPPLEANTNR KPLILQPDAESESDSDS
Sbjct: 121 NLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169

[Close]

BLAST of Lag0041013 vs. NCBI nr
Match: XP_038891512.1 (probable RNA-binding protein EIF1AD isoform X1 [Benincasa hispida])

HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78
Identity = 156/172 (90.70%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASEQHI S+EDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEQHISSIEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQVRELQKSPEWP++FKNAI  D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDQNE 120

Query: 121 NLQARNNQPEED---EVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQA+NN+PEED   EVDSS+DDGLPPLEANTNRTKPLILQPD ESESDSDS
Sbjct: 121 NLQAQNNRPEEDEVTEVDSSDDDGLPPLEANTNRTKPLILQPDTESESDSDS 172

[Close]

BLAST of Lag0041013 vs. NCBI nr
Match: XP_023547328.1 (probable RNA-binding protein EIF1AD [Cucurbita pepo subsp. pepo] >KAG7031527.1 putative RNA-binding protein EIF1AD [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.4 bits (768), Expect = 9.5e-78
Identity = 152/169 (89.94%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHIV LEDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQVRELQKSPEWP++FKNAIT D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQARNNQPEEDEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQA NN+ EEDE+DSS+DDGLPPLEANTNR KPLILQP+ E+ESDSDS
Sbjct: 121 NLQAENNRQEEDEIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]

BLAST of Lag0041013 vs. NCBI nr
Match: XP_022991942.1 (probable RNA-binding protein EIF1AD [Cucurbita maxima])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 151/169 (89.35%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHIV LEDGHSIMQV+S+RGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSVRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQVRELQKSPEWP++FKNAIT D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQARNNQPEEDEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQA NN+ EEDE+DSS+DDGLPPLEANTNR KPLILQP+ E+ESDSDS
Sbjct: 121 NLQAENNRQEEDEIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]

BLAST of Lag0041013 vs. NCBI nr
Match: XP_022942753.1 (probable RNA-binding protein EIF1AD [Cucurbita moschata])

HSP 1 Score: 297.7 bits (761), Expect = 6.2e-77
Identity = 150/169 (88.76%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHIV LEDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQVR+LQKSPEWP++FKNAIT D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRQLQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQARNNQPEEDEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQ  NN+ EEDE+DSS+DDGLPPLEANTNR KPLILQP+ E+ESDSDS
Sbjct: 121 NLQTENNRQEEDEIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]

BLAST of Lag0041013 vs. ExPASy Swiss-Prot
Match: Q7SY07 (Probable RNA-binding protein EIF1AD OS=Danio rerio OX=7955 GN=eif1ad PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17
Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 5   RKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRG 64
           RK++ +   +  V+  +   IM+V+   G+NL E +   GE+ L   P KF+K++WIKRG
Sbjct: 7   RKHVVKEVLEDYVTPTEDQQIMRVLGSNGNNLHEAVTGSGERFLLSMPTKFRKNIWIKRG 66

Query: 65  SFVVVDESGKKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITV-DRNENLQ 124
            FV+VD       ++ G KV   +S +LY + ++ L+K   WP+ F+   T  +RNE  Q
Sbjct: 67  DFVIVD------PIKEGGKVKGEISFILYRDHIQHLRKLGVWPEGFQEDRTSGERNEGTQ 126

Query: 125 -ARNNQPEEDEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSD 169
             R+ + EE+E DS  +D    L  NTNR    +L  ++E E+D D
Sbjct: 127 KERSEEKEEEEGDSESEDDDSDLFVNTNRA--TVLYSESEEETDED 164

[Close]

BLAST of Lag0041013 vs. ExPASy Swiss-Prot
Match: Q8N9N8 (Probable RNA-binding protein EIF1AD OS=Homo sapiens OX=9606 GN=EIF1AD PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-16
Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 14  QHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +HIV   D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHIVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNENLQARNNQPEE-- 133
               +E G KV   +S VL  + VR LQK   WP+ F        N N Q +   P E  
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQTQPELPAEPQ 136

Query: 134 --DEVDSSEDDGLPPLEANTNRTKPLILQPDAESE 165
              E  SSEDD    L  NTNR +    + ++E E
Sbjct: 137 LSGEESSSEDDS--DLFVNTNRRQYHESEEESEEE 162

[Close]

BLAST of Lag0041013 vs. ExPASy Swiss-Prot
Match: Q4R354 (Probable RNA-binding protein EIF1AD OS=Macaca fascicularis OX=9541 GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-16
Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 14  QHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +HIV   D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHIVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNENLQARNNQPEE-- 133
               +E G KV   +S VL  + VR LQK   WP+ F        N N Q +   P E  
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQTQPELPAEPQ 136

Query: 134 --DEVDSSEDDGLPPLEANTNRTKPLILQPDAESE 165
              E  SSEDD    L  NTNR +    + ++E E
Sbjct: 137 LSGEESSSEDDS--DLFVNTNRRQYHESEEESEEE 162

[Close]

BLAST of Lag0041013 vs. ExPASy Swiss-Prot
Match: Q58CY2 (Probable RNA-binding protein EIF1AD OS=Bos taurus OX=9913 GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.2e-16
Identity = 59/158 (37.34%), Postives = 84/158 (53.16%), Query Frame = 0


Query: 14  QHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +H+V   D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHMVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNENLQARNNQPE--- 133
               +E G KV   +S VL  + VR LQK   WP+ F      D N+  + R  QPE   
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKDGHWPEAFSQVTEKDNND--RNRQTQPELPA 136

Query: 134 ----EDEVDSSEDDGLPPLEANTNRTKPLILQPDAESE 165
                 E  SSEDD    L  NTNR +    + ++E E
Sbjct: 137 EPQSSGEESSSEDDS--DLFVNTNRRQYHESEEESEEE 163

[Close]

BLAST of Lag0041013 vs. ExPASy Swiss-Prot
Match: Q5RD29 (Probable RNA-binding protein EIF1AD OS=Pongo abelii OX=9601 GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15
Identity = 59/158 (37.34%), Postives = 85/158 (53.80%), Query Frame = 0


Query: 14  QHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +HIV   D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHIVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKTALESGSKVACIVSRVLYFEQVRELQKSPEWPQVFKNAITVDRNENLQARNNQPE--- 133
               +E G KV   +S VL  + VR LQK   WP+ F      +++ N + R  QPE   
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSE--VAEKHNNNRNRQTQPELPA 136

Query: 134 ----EDEVDSSEDDGLPPLEANTNRTKPLILQPDAESE 165
                 E  SSEDD    L  NTNR +    + ++E E
Sbjct: 137 EPQLSGEESSSEDDS--DLFVNTNRRQYRESEEESEEE 163

The following BLAST results are available for this feature:

BLAST of Lag0041013 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146450.1	3.9e-79	91.72	probable RNA-binding protein EIF1AD [Cucumis sativus] >KGN50715.1 hypothetical p...	[more]
XP_038891512.1	2.5e-78	90.70	probable RNA-binding protein EIF1AD isoform X1 [Benincasa hispida]	[more]
XP_023547328.1	9.5e-78	89.94	probable RNA-binding protein EIF1AD [Cucurbita pepo subsp. pepo] >KAG7031527.1 p...	[more]
XP_022991942.1	1.2e-77	89.35	probable RNA-binding protein EIF1AD [Cucurbita maxima]	[more]
XP_022942753.1	6.2e-77	88.76	probable RNA-binding protein EIF1AD [Cucurbita moschata]	[more]

BLAST of Lag0041013 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7SY07	1.1e-17	35.54	Probable RNA-binding protein EIF1AD OS=Danio rerio OX=7955 GN=eif1ad PE=2 SV=1	[more]
Q8N9N8	3.7e-16	38.06	Probable RNA-binding protein EIF1AD OS=Homo sapiens OX=9606 GN=EIF1AD PE=1 SV=1	[more]
Q4R354	3.7e-16	38.06	Probable RNA-binding protein EIF1AD OS=Macaca fascicularis OX=9541 GN=EIF1AD PE=...	[more]
Q58CY2	8.2e-16	37.34	Probable RNA-binding protein EIF1AD OS=Bos taurus OX=9913 GN=EIF1AD PE=2 SV=1	[more]
Q5RD29	1.4e-15	37.34	Probable RNA-binding protein EIF1AD OS=Pongo abelii OX=9601 GN=EIF1AD PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001253	Translation initiation factor 1A (eIF-1A)	SMART	SM00652	eIF1neu4	coord: 18..107 e-value: 5.1E-28 score: 109.1
IPR006196	RNA-binding domain, S1, IF1 type	PFAM	PF01176	eIF-1a	coord: 23..72 e-value: 2.0E-10 score: 40.3
IPR006196	RNA-binding domain, S1, IF1 type	PROSITE	PS50832	S1_IF1_TYPE	coord: 12..92 score: 9.581142
None	No IPR available	GENE3D	2.40.50.140		coord: 1..141 e-value: 4.4E-28 score: 99.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..169
IPR039294	Probable RNA-binding protein EIF1AD	PANTHER	PTHR21641	TRANSLATION INITIATION FACTOR-RELATED	coord: 1..168
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 13..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041013.1	Lag0041013.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding