Lag0040972 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040972
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	zf-RVT domain-containing protein
Location	chr13: 10428641 .. 10434737 (-)
RNA-Seq Expression	Lag0040972
Synteny	Lag0040972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTTCTTTCTTTGATTGAAGATGTTTCCTTTAGACAAGGCAGGAGGGACATTCGTGTTTGGAACCCTAACCCCTCTAAGGGTTTCTCTTGCCGCTCGTTCTTTCATTGTCTTCTTGACCCTTCTTCTCCTCCTGAGAGATCAGTTTATTCTCTGGTTTGGAAAGTGAAAATCCCAAAGAAGGTGCAATTTTTTACTTGGCAGGTTCTCCATGGAAGAGCAAACACCCTTGATCGGCTTGCGAGAAAGATGCCCAATTTGATAGGCCCGTTTTGTTGTATTCTCTGTAGGAAGGCGGAGGAAGACCTCGATCATATTTTATGGCACTGTGACTTTGCGCGTTCGGTTTGGAACAATTTGTTTGAGATCTTTGAATTTCAATTTGCTAGACACAGGGATCTCAGGGAGATGATCGATGAGTTCCTCCCCCATCCCCTTTTCGGGACCAAGGAAATTTCTTATGGCAAGCTGGGATTTGTGCTATCATTTGGGGTTTGTGGGGGGAGAGAAATAACAGAATTTTTAGAGGGAAAGAGAGGAATGTGGAGGATGTTTGGGATATTATTAGATATTTTGTCTCTTTATGGGCGTCGGTGACGCGTTTATTCTGTAATTATTCTTTAGGTCTTATTTTGTTAGATTGACGTCCCTTTATCTAAGGGGATTTCCTTTTGGGGCTTGGTTTTTTTGTATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGGTTGGTTTATTATAAAAAAAAAAAAAAAGAACATTGGTGGCATCAGTGGCATGGCATGAGATCCATATTTTTCCGTTTCTACTTTCTATTTCTTGCTTAGTCTCATGATACTGGAAGAAATGCTTTCTTCCCCAAAGTGGATAGTAAATAGAATCTATATATATACATGATCACTTATCCTAGCATTTCTTTGAATTGACCTTACTAAATTTTCTAGTTGCTGTCTAGTTCTCTTGACCTCTAGTTGATGTAATTTCCGCTCCATTACCAAGTAAAATGTTCTTTTCACAATTTTCTTCTATTTTAGGTCTTGCCTGGAGATGATAGTTCTCTTGCAAATGACATTCGGAAAGAGAGGAAGGTAAAACTTTGACAATGCTTATACTTCACCTTCAGAGGGAATTGAGAAAAGAAAGATTAGATTAAGTTAGAACTCTTTTGGCATGATTCTTTGATAGGAATAATCATCTTCTTGTCACACATATATATTTAAGGTCGTTGCGGTTGGACTATCTAGAAGGCAATTGTTTTTCTAGTAGAAAATGATCAAATGCAATGATTGAACCTTTGAGAAAAGACCTTGGCCTACATTGGTGTTGGATAAACTTTGACATTGAAGTCTTAGAAGTTTGTAGCAATTGCTAGGAGCAGTAAATATTTCATTGATACATAGTCTAAAGAGTGAAATAGTTGGCATGGAAAACTGCTTCACATTTGTCATATATACGTTGGTAATAATCATGGTTAAATAATCATATTGGTGCTTCATGTTTAAACAAATTATGAACCATTTGTTGGAGGCACCTAGAGTAATTTCGTCTTCATATATCTGCATCACAGGTTTGATTTCTTGTTAATCTTGGTTAGACCTTAATTATATCATTTATGAGCATATAATGTAGGCAAATTTCACAGAGAGGTGTACATGGTTACCAGTTGATTATTCTGTTTGAAGGGCGCTGCTTAAGAAAGGTTGCAACATTTATGCATAATAACATTGTTGTATGCATAATAACAATTCTATATAAAGGAAATGTTACTTTTTTGTCCTTTCTTATTCCAACTCTTTGTGCCTTCAGATAATGCCAAACATGGTATTTTCGTTGACAATCTTGTGGGCCAAATGGAAGTCTAAAATTTTGTTGTGGCTTAATGACGTAGATGGGTGCTTGCATGTTCTTTTAGCATTGTCAAAATTGTCAACTCTTCTTGTAAGAAGTGCTTCAATGTAATTATCTTCTCTAGCTTTGTGTAGGTCAAAGAAGGGCCAAAAGCCCATGGCATCAACCACATCCGAAACAGGGAACTTTCAATTTATACTCTCTCAGTTTGCTTGTGATCTTTCATTTCCGGATGGTTTTTCTGCCAATGTTGTGTCAAATGCTAAACTTGATTAAACTAACTTCTTTGTTAGCTTGATGTTAGAGAATTATATCACTATGGCGTACTTGTTCATGTCCTTGGATGATCTTTTATTTATGTTATTTTTCCCTTTAGTTTAGTTGATGTGTGAGAAGTATTTTTTTGTTTCTCTTCTTCTATTTACAACTAGTTGCATTCAATTAGGGGTGAAAGGAACCGAACCGAACTGGTTCGGTTTGTTTCGGGTTTTGACTTTAATTATGATCAAACCGATAGGGTTCGGTTCGGTCCTCGCCTCTTTTTTGCCTGAACTGATATGTAGCAGTCAGTTTTTGGGTTTAAAAGAAAAAAAAAAAAAGAAGGGAGGGAAGTTGGCTTTTCAGCCGGTCAAAGAGGAGGGAAAAAGGGGGGGGGGAACATTTCACGTTTCCCCCCAAAAACGGTCTTTTGACCATTTAAAAAAAAATATAGGAATCTCTCTCCCTCTCGCAGCGTTCTCTCTCTCTTTCCCTCGCACGCTCTCGGTCTTCCTTCAGCCGCACGCCGCCGCCTTCAGCCCATACCGCCGTCGTCGCCTTCCTCCGCCGCCGCCGGTAATGTCTATCTCTCTCTCTTGTTTTCGTCTCTCTCTTTAACCCGTCTCCATCTCACTCTCTCGGCTCTCTCTCTCTCTCTCTTCCTCGCAGCTCTCTCTCTCGCTCGACGTCGCAAGTCGCCGTGAACCGCCCGACGCCGCCGCTCGCCTCCCGTCGTCGTGCACGCCGCAGCCGTCGTGTCCAGATCTGTTCGTTCTTCTTCGCTCGGATCTGATTACTGCCGTCACTGCCTTAAGACAAATAGTCACACGTCTTTTGTGCGTTCGACGATTTCAGTTAGTGGGTAAGTGAGATTTAAGGTGTTTTGGTCTATGTAATGTTTAATCATGGATGCCCATTGAGTTTAGCTTCCGATTGCAAGGTGCCCGTGGTGTTTGGAGGCCAAATTATCGAATTTGAGCGATTTGGGACTGCTGGACAGCAAGCTGTGGTTCTGTTTGGGTAAGCTTTGGTTGTTAATTTTACCCTAAATGTAATGGGTTCTTAGTTGAATGCTTGGTTAGAGTTCATAGTTAATTAAGAGTTCTTTTCCTTGTTGTAGCTTGCTTAAGAACCTTGGAGTTAAGGAATTTCTTGGAGGTTAATCAAGTATCTCCTTCACTAAGGCAAGTAGCTAGTTGGATTCAAATTCTATGTCTTAGACTAATTGACCATTGTTTGTTAAATGGGAATTTAAAGTGGATAGTTGGATTGAAGTTCCATTTTTTTAAATCAAGTTGGTCCTTAAGTTTAAGTAAAGTGTGTTGGGTTAACTTTTGAAGCATGATGAGCATGTTGAGATTGCCATTATTTGGGCATTAAATGAGTAGCGTGGATTATGGAATAATTGGAGTTTGGGCTAAGTGTTCTTTGTTTGTGTTGAGGCCGTGAATTTCATGTTTTATTTGGTTAGCCATGAACTGAAATGCCTGGGATTAATATATATGTAGCCGTTGGATTTAGTTCTATGTTTTGGCTTAATTTTCTTTGAAAACTTAATATGTTAGTATGGATAAGATTTGAGCCTTGAGTTTTGACTGTGGAATCATGATAAGCTTCATTATAAGACATGTTGATAGCACGAGGATCCTAAAGTTAACCTAGCATCTCTTGGTTTATTTTAAAGCATGTTTGGCTTGGATGGCTATGTGTTTCTCTGGATTTTATTTGTGATATTGGGGGATGGGTTGAATGTCTGTTGGAGTTTGGATTGAAGTTTGGATGCGACATCTGACCCGTTGTGACTATAGAAGTGCATTATATTGTTTCCAGGTGTATAAAAATTTTGGGTTCCCTCTGCGTGTGCCGTTATGCTGCCGAATTTTCGGTAGCCTCATGACGGCTTGGGAATCATATTTACCTTGAGGGAAAAGATTAGGAAAGAGAAAGGAATAGGCTAGTGCCTTAGTCGATGGTCGTGTCAATTAAACACCTAGGACTGAGATGTAATAGACTGAAATGAGGGGCTTAATGGGCGGGACTTGGCTTCGCAGTCTAGGTGCCATTTAGTAACTGTGGAAGTAAATTCCTGACTTAAACCCATGAACGCTCCACCAGTGAAATGGTAGCATAGAGCGCTACGCGCCTATTAGTGCCTTGAGGGATGAGACTTAGCTCCACTGACTGGGTGCCATCTACCATCAGTAGGAGTAGAGACCTCCCAAAACTCCCACTTGTGCACTATCAGTGAGTTGGCAAACTTATATATAAATAAAGGTGTACTAATTGAACACGAGACCCGAACTACAGAGAAATGAAATGAAATGAAATGAGATGACCTAACCCTGAGGCCCCTAACTCGAATAAAATGTTAAAGCCTTGACTGCTACTTACTGAGTATTTTCTTAAATACTCATTCTTTTCCCTTACATACAACTGCAGGTAGAGGTAAAGGTGTACAAGGCGCGTGACGGAGAGCTGCTGAGCCATGGATCTCCTTTAGGATAGTCTTCCGCATTTTACGTTTTGAAATTCTCCTTTTTGACTTGTATTGCGTTGTTTTAAGATATTTTCCACGTTAAGTTTTGTTTTGAATAACTAAAGTTTTCGTTTGTTCTGTTTTAACTGGGATCCCAGATTGAAAAGTTTTGTAAATTTCTAGGTATGTTTTCTTTAAATGTTATTTCCTCGCCGTTCTTAGAAGTAGAACGAAATGCAAGTAGTAACGGCCTTAAAATCTAGGCATGAAAAGTACGGTCGTTACATGATATATGCGTGTTTTTTTTGTTTTTGTTCAGATTTTAGGGTTTCAAACCGATATACACGCACACGGTCTTCGCCTCGCCTCTTTGACTTCGTCTTCCTCATCTGTTGTCTCTCTGTCTTCATTTCTGTTCGCCTCTTCGACTTCGTCTTCCTCACCTGTCGCCTCTCCGTCTTCGTTTTTGTTCGCCTCTTCGACTTCGTCTTCCTCGCCTGTCGCCTCTTCATTTTTGTTTGCCTTTTCGTCTTCGTCTTCCTCACCTCTCGCCTCTCCGTCTTTGTTTTTGTTCGCCTGTCACCTGTTTCAAACGAGTCGTGCTTATTGTCGTCGTCGGTGCTATTCAATCTCTCCTCTCCCTGCTCGTGCTTGCCATCGGTACTATTCAATCCATCTCGTTCTCTATTTGTGCTCGCCGCTAGTGTCGTTTAGGCGTTCACTCTCACTGTCCCTACTTATGCTTACTGTCGAGTTTAAGTCGTCATCGCCGTCGGGTAATTTTAAGTCGCTATTCTCTACTTTTGCTATCTAGTCTTCTTTTGGTGTTTGTTGGTTTATGTTTGTTTGTTTCTTTGTAGATTACTCCATTCTGATTATAGTGTTGACAGGTGGAAGGGCGAATCTACATGTCCAGAGAGTCTAAAAATGGCGTAGAGTTTCTTAAACGAAAAAGGATTCCACGAATGAAACCCGAAGTTGTTGCTGGGACGGTTACCGTAACAAATTATAAAATGGGCTCCAGCTTTTTCTATAGAGTCAGATTAGGATGGCCTACGGTACTTTTATAGATGATTTGTTTTGAATTCCATTGTTGGCTTTGTAATTATGCTAGGTGTTTGAAGCAAATGGAAGACAGGTATATTAAGAAACTCAGAGAGGAGGAACCCAAAAAGAAAAAAAAAAAAACACGGATGAGCCATCCTGATCTGACCCAGTTCAGGTCACTCTGAACTGGGTCGGGTCGGTTTGTCCGTACAATCGACCCGAGAATTTTACACCGCTATTTATAAAGGTTTATTCTTTTTGGTTTTTCTTGTTTGATAGGATTTCATGTTCGAGGACACAATCTTTTGCGTCGTATTTGATGGTCAGGGGCCTTATAGTCGTCTTGTTGCTCGAAAAGTGAGGGATACATTGCCTACGCCTATAAAAGTTGTCCTCCTAGTTTCTTCAGTTGTGTACTTATTTTGTTTAGGAATTTTACTTTTTCTTTGTAAATTGGACCAATGA

mRNA sequence

ATGTCTCTTCTTTCTTTGATTGAAGATGTTTCCTTTAGACAAGGCAGGAGGGACATTCGTGTTTGGAACCCTAACCCCTCTAAGGGTTTCTCTTGCCGCTCGTTCTTTCATTGTCTTCTTGACCCTTCTTCTCCTCCTGAGAGATCAGTTTATTCTCTGGTTTGGAAAGTGAAAATCCCAAAGAAGGTGCAATTTTTTACTTGGCAGGTTCTCCATGGAAGAGCAAACACCCTTGATCGGCTTGCGAGAAAGATGCCCAATTTGATAGGCCCGTTTTGTTGTATTCTCTGTAGGAAGGCGGAGGAAGACCTCGATCATATTTTATGGCACTGTGACTTTGCGCGTTCGGTTTGGAACAATTTGTTTGAGATCTTTGAATTTCAATTTGCTAGACACAGGGATCTCAGGGAGATGATCGATGAGTTCCTCCCCCATCCCCTTTTCGGGACCAAGGAAATTTCTTATGGCAAGCTGGGATTTGTGCTATCATTTGGGGTCTTGCCTGGAGATGATAGTTCTCTTGCAAATGACATTCGGAAAGAGAGGAAGATAATGCCAAACATGGTATTTTCGTTGACAATCTTGTGGGCCAAATGGAAGTCTAAAATTTTGTTGTGGCTTAATGACGTAGATGGGTGCTTGCATGTTCTTTTAGCATTGTCAAAATTGTCAACTCTTCTTCCGCACGCCGCCGCCTTCAGCCCATACCGCCGTCGTCGCCTTCCTCCGCCGCCGCCGCTCTCTCTCTCGCTCGACGTCGCAAGTCGCCGTGAACCGCCCGACGCCGCCGCTCGCCTCCCGTCGTCGTGCACGCCGCAGCCGTCGTGTCCAGATCTGTTCGTTCTTCTTCGCTCGGATCTGATTACTGCCGTCACTGCCTTAAGACAAATAGTCACACGTCTTTTGTGCGTTCGACGATTTCAGTTAGTGGCTTCCGATTGCAAGGTGCCCGTGGTGTTTGGAGGCCAAATTATCGAATTTGAGCGATTTGGGACTGCTGGACAGCAAGCTGTGGTTCTGTTTGGCTTGCTTAAGAACCTTGGAGTTAAGGAATTTCTTGGAGATTTTAGGGTTTCAAACCGATATACACGCACACGGTCTTCGCCTCGCCTCTTTGACTTCGTCTTCCTCATCTGTTGTCTCTCTGTCTTCATTTCTGTTCGCCTCTTCGACTTCGTCTTCCTCACCTGTCGCCTCTCCGTCTTCGTTTTTGTTCGCCTCTTCGACTTCGTCTTCCTCGCCTGTCGCCTCTTCATTTTTGTTTGCCTTTTCGTCTTCGTCTTCCTCACCTCTCGCCTCTCCGTCTTTGTTTTTGTTCGCCTGTCACCTGTTTCAAACGAGTCGTGCTTATTGTCGTCGTCGGTGCTATTCAATCTCTCCTCTCCCTGCTCGTGCTTGCCATCGGTGGAAGGGCGAATCTACATGTCCAGAGAGTCTAAAAATGGCGTAGAGTTTCTTAAACGAAAAAGGATTCCACGAATGAAACCCGAAGTTGTTGCTGGGACGGTTACCGTAACAAATTATAAAATGGGCTCCAGCTTTTTCTATAGAGTCAGATTAGGATGGCCTACGGATTTCATGTTCGAGGACACAATCTTTTGCGTCGTATTTGATGGTCAGGGGCCTTATAGTCGTCTTGTTGCTCGAAAAGTGAGGGATACATTGCCTACGCCTATAAAAGTTGTCCTCCTAGTTTCTTCAGTTGTGTACTTATTTTGTTTAGGAATTTTACTTTTTCTTTGTAAATTGGACCAATGA

Coding sequence (CDS)

ATGTCTCTTCTTTCTTTGATTGAAGATGTTTCCTTTAGACAAGGCAGGAGGGACATTCGTGTTTGGAACCCTAACCCCTCTAAGGGTTTCTCTTGCCGCTCGTTCTTTCATTGTCTTCTTGACCCTTCTTCTCCTCCTGAGAGATCAGTTTATTCTCTGGTTTGGAAAGTGAAAATCCCAAAGAAGGTGCAATTTTTTACTTGGCAGGTTCTCCATGGAAGAGCAAACACCCTTGATCGGCTTGCGAGAAAGATGCCCAATTTGATAGGCCCGTTTTGTTGTATTCTCTGTAGGAAGGCGGAGGAAGACCTCGATCATATTTTATGGCACTGTGACTTTGCGCGTTCGGTTTGGAACAATTTGTTTGAGATCTTTGAATTTCAATTTGCTAGACACAGGGATCTCAGGGAGATGATCGATGAGTTCCTCCCCCATCCCCTTTTCGGGACCAAGGAAATTTCTTATGGCAAGCTGGGATTTGTGCTATCATTTGGGGTCTTGCCTGGAGATGATAGTTCTCTTGCAAATGACATTCGGAAAGAGAGGAAGATAATGCCAAACATGGTATTTTCGTTGACAATCTTGTGGGCCAAATGGAAGTCTAAAATTTTGTTGTGGCTTAATGACGTAGATGGGTGCTTGCATGTTCTTTTAGCATTGTCAAAATTGTCAACTCTTCTTCCGCACGCCGCCGCCTTCAGCCCATACCGCCGTCGTCGCCTTCCTCCGCCGCCGCCGCTCTCTCTCTCGCTCGACGTCGCAAGTCGCCGTGAACCGCCCGACGCCGCCGCTCGCCTCCCGTCGTCGTGCACGCCGCAGCCGTCGTGTCCAGATCTGTTCGTTCTTCTTCGCTCGGATCTGATTACTGCCGTCACTGCCTTAAGACAAATAGTCACACGTCTTTTGTGCGTTCGACGATTTCAGTTAGTGGCTTCCGATTGCAAGGTGCCCGTGGTGTTTGGAGGCCAAATTATCGAATTTGAGCGATTTGGGACTGCTGGACAGCAAGCTGTGGTTCTGTTTGGCTTGCTTAAGAACCTTGGAGTTAAGGAATTTCTTGGAGATTTTAGGGTTTCAAACCGATATACACGCACACGGTCTTCGCCTCGCCTCTTTGACTTCGTCTTCCTCATCTGTTGTCTCTCTGTCTTCATTTCTGTTCGCCTCTTCGACTTCGTCTTCCTCACCTGTCGCCTCTCCGTCTTCGTTTTTGTTCGCCTCTTCGACTTCGTCTTCCTCGCCTGTCGCCTCTTCATTTTTGTTTGCCTTTTCGTCTTCGTCTTCCTCACCTCTCGCCTCTCCGTCTTTGTTTTTGTTCGCCTGTCACCTGTTTCAAACGAGTCGTGCTTATTGTCGTCGTCGGTGCTATTCAATCTCTCCTCTCCCTGCTCGTGCTTGCCATCGGTGGAAGGGCGAATCTACATGTCCAGAGAGTCTAAAAATGGCGTAGAGTTTCTTAAACGAAAAAGGATTCCACGAATGAAACCCGAAGTTGTTGCTGGGACGGTTACCGTAACAAATTATAAAATGGGCTCCAGCTTTTTCTATAGAGTCAGATTAGGATGGCCTACGGATTTCATGTTCGAGGACACAATCTTTTGCGTCGTATTTGATGGTCAGGGGCCTTATAGTCGTCTTGTTGCTCGAAAAGTGAGGGATACATTGCCTACGCCTATAAAAGTTGTCCTCCTAGTTTCTTCAGTTGTGTACTTATTTTGTTTAGGAATTTTACTTTTTCTTTGTAAATTGGACCAATGA

Protein sequence

MSLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPKKVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRKAEEDLDHILWHCDFARSVWNNLFEIFEFQFARHRDLREMIDEFLPHPLFGTKEISYGKLGFVLSFGVLPGDDSSLANDIRKERKIMPNMVFSLTILWAKWKSKILLWLNDVDGCLHVLLALSKLSTLLPHAAAFSPYRRRRLPPPPPLSLSLDVASRREPPDAAARLPSSCTPQPSCPDLFVLLRSDLITAVTALRQIVTRLLCVRRFQLVASDCKVPVVFGGQIIEFERFGTAGQQAVVLFGLLKNLGVKEFLGDFRVSNRYTRTRSSPRLFDFVFLICCLSVFISVRLFDFVFLTCRLSVFVFVRLFDFVFLACRLFIFVCLFVFVFLTSRLSVFVFVRLSPVSNESCLLSSSVLFNLSSPCSCLPSVEGRIYMSRESKNGVEFLKRKRIPRMKPEVVAGTVTVTNYKMGSSFFYRVRLGWPTDFMFEDTIFCVVFDGQGPYSRLVARKVRDTLPTPIKVVLLVSSVVYLFCLGILLFLCKLDQ

Homology

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BLAST of Lag0040972 vs. NCBI nr
Match: TYK29954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-31
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 14  QGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPKKVQFFTWQVLHG 73
           +G R++ VW+ NPS+GFS +S F  LLDP SP    V+  VW++K+ KKV+FFTWQVL  
Sbjct: 185 EGERNVHVWSANPSQGFSSKSLFSLLLDP-SPTREFVFYAVWRIKVCKKVRFFTWQVLLD 244

Query: 74  RANTLDRLARKMPNLIGPFCCILCRKAEEDLDHILWHCDFARSVWNNLFEIFEFQFARHR 133
           RAN +DRL R+        CCILCRKA+EDLDH+LW C +AR+VW +  + F+ + A  R
Sbjct: 245 RANIVDRLVRRGEPRWSSNCCILCRKAKEDLDHLLWDCQYARAVWGSFLQEFDVRLAGLR 304

Query: 134 DLREMIDEFL 144
            +R+ I+EFL
Sbjct: 305 TVRKTIEEFL 313

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BLAST of Lag0040972 vs. NCBI nr
Match: XP_008464727.1 (PREDICTED: uncharacterized protein LOC103502543 [Cucumis melo])

HSP 1 Score: 131.7 bits (330), Expect = 2.0e-26
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 2   SLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPK 61
           SLLS ++  SFR+GRRDI VWNPNPS GF   S F  LLDP +P +  V+ +VW   +PK
Sbjct: 187 SLLSFLKGCSFREGRRDIHVWNPNPSWGF---SMFSLLLDP-APTKELVFDVVWSTNVPK 246

Query: 62  KVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRKAEEDLDHI 108
           KV FF WQVL  + N +DRL R+  +L+G FCC+LC+KAE DLDH+
Sbjct: 247 KVMFFIWQVLLDQVNIVDRLVRRRTSLVGLFCCMLCQKAENDLDHL 288

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BLAST of Lag0040972 vs. NCBI nr
Match: TYK09969.1 (calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-25
Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 1   MSLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIP 60
           ++L+SL+E  SFR GRRD+ VW+P P +GF C+SFF CL++ S+P   SV SL+W++K+P
Sbjct: 188 VALISLLESHSFRLGRRDVTVWSPFPLEGFLCKSFFQCLVN-STPTSESVSSLIWRIKVP 247

Query: 61  KKVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRKAEEDLDHILWHCDFARSVWNN 120
           +K   F+WQV                              EEDLDH+LWHC+    VW++
Sbjct: 248 RKFVLFSWQV------------------------------EEDLDHLLWHCELVSCVWDD 299

Query: 121 LFEIFEFQFARHRDLREMIDEFL 144
             + F   +ARHRD+R  ++EFL
Sbjct: 308 FLQTFGLSYARHRDVRGTVEEFL 299

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BLAST of Lag0040972 vs. NCBI nr
Match: KAA0054311.1 (golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 1.5e-21
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 2   SLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPK 61
           SLL+L++  +F++ RRD+RV  PNPS GF C+S F  LLDP SP    V+ +V + K+PK
Sbjct: 439 SLLTLLDGCNFKEERRDVRVRTPNPSMGFICKSLFILLLDP-SPYFEFVFDVVGRTKVPK 498

Query: 62  KVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRK 100
           KV+FF WQVL GR   +DRL RK  +LI PFCCILCRK
Sbjct: 499 KVRFFNWQVLLGR--VMDRLVRKRTSLISPFCCILCRK 533

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BLAST of Lag0040972 vs. NCBI nr
Match: KAA0041012.1 (uncharacterized protein E6C27_scaffold125G002320 [Cucumis melo var. makuwa] >TYK20370.1 uncharacterized protein E5676_scaffold228G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 7.4e-21
Identity = 70/168 (41.67%), Postives = 85/168 (50.60%), Query Frame = 0


Query: 2   SLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPK 61
           SLLS ++  SFR+GRRDI VWNPNPS GF   S F  LLDP +P +  V+ +VW   +PK
Sbjct: 384 SLLSFLKGCSFREGRRDIHVWNPNPSWGF---SMFSLLLDP-APTKELVFDVVWSTNVPK 443

Query: 62  KVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRKAEEDLDHILWHCDFARSVWNNL 121
           KV FF WQVL      LD+                              C FAR VW++ 
Sbjct: 444 KVMFFIWQVL------LDQ-----------------------------DCKFARVVWSSF 503

Query: 122 FEIFEFQFARHRDLREMIDEFLPHPLFGTKEISY---GKLGFVLSFGV 167
            + F   FA  R LR  I+EFL HPLF  K   Y   G +G   +FGV
Sbjct: 504 LQEFGVSFASLRSLRATIEEFLLHPLFKDKGAFYGFPGCVGLFRTFGV 512

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BLAST of Lag0040972 vs. ExPASy Swiss-Prot
Match: Q8GY60 (Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana OX=3702 GN=At4g03415 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.4e-07
Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 525 DFMFEDTIFCVVFDGQGPYSRLVARKVRDTLPTPIK 561
           DFM ED  FC VFDG GPY  LVARKVRDTLP  ++
Sbjct: 89  DFMSEDVTFCGVFDGHGPYGHLVARKVRDTLPVKLQ 124

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BLAST of Lag0040972 vs. ExPASy Swiss-Prot
Match: Q9LR65 (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana OX=3702 GN=PPC6-6 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-05
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 525 DFMFEDTIFCVVFDGQGPYSRLVARKVRDTLPTPIKVVLLVSSV 569
           DFM +D  FC VFDG GP+  LVARKVRD+L  P+K++ L++S+
Sbjct: 82  DFMSKDVTFCGVFDGHGPHGHLVARKVRDSL--PVKLLSLLNSI 123

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BLAST of Lag0040972 vs. ExPASy Swiss-Prot
Match: Q8RXZ4 (Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana OX=3702 GN=At1g79630 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.6e-05
Identity = 28/80 (35.00%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 496 PEVVAGTVTVTNYKMGSSFFYRVRLGWPTDFMF--------EDTIFCVVFDGQGPYSRLV 555
           P+V+   V+  + K+   +  + + G   D M         +DT+FC VFDG GP+  +V
Sbjct: 53  PQVLGRLVSNGSSKIACLYTQQGKKGTNQDAMLVFENFCSRDDTVFCGVFDGHGPFGHMV 112

Query: 556 ARKVRDTLPTPIKVVLLVSS 568
           A+KVRDTLP  +   L ++S
Sbjct: 113 AKKVRDTLPFTLLTQLKMTS 132

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BLAST of Lag0040972 vs. ExPASy Swiss-Prot
Match: Q9FG61 (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana OX=3702 GN=At5g36250 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.0e-04
Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 0


Query: 522 WPTDFMFEDTIFCVVFDGQGPYSRLVARKVRDTLP 557
           W      EDT+FC VFDG GPY  +VA++VRD LP
Sbjct: 87  WENFGSMEDTVFCGVFDGHGPYGHIVAKRVRDLLP 121

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BLAST of Lag0040972 vs. ExPASy Swiss-Prot
Match: Q7XW27 (Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0321800 PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-04
Identity = 23/44 (52.27%), Postives = 27/44 (61.36%), Query Frame = 0


Query: 520 LGWPTDFMFEDTIFCVVFDGQGPYSRLVARKVRDTLPTPIKVVL 564
           L W      EDTIFC VFDG GPY  LV+++VRD LP  +   L
Sbjct: 136 LVWENFCSKEDTIFCGVFDGHGPYGHLVSKRVRDLLPIKLSANL 179

[Close]

BLAST of Lag0040972 vs. ExPASy TrEMBL
Match: A0A5D3E255 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold588G00180 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-32
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 14  QGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPKKVQFFTWQVLHG 73
           +G R++ VW+ NPS+GFS +S F  LLDP SP    V+  VW++K+ KKV+FFTWQVL  
Sbjct: 185 EGERNVHVWSANPSQGFSSKSLFSLLLDP-SPTREFVFYAVWRIKVCKKVRFFTWQVLLD 244

Query: 74  RANTLDRLARKMPNLIGPFCCILCRKAEEDLDHILWHCDFARSVWNNLFEIFEFQFARHR 133
           RAN +DRL R+        CCILCRKA+EDLDH+LW C +AR+VW +  + F+ + A  R
Sbjct: 245 RANIVDRLVRRGEPRWSSNCCILCRKAKEDLDHLLWDCQYARAVWGSFLQEFDVRLAGLR 304

Query: 134 DLREMIDEFL 144
            +R+ I+EFL
Sbjct: 305 TVRKTIEEFL 313

[Close]

BLAST of Lag0040972 vs. ExPASy TrEMBL
Match: A0A1S3CMM8 (uncharacterized protein LOC103502543 OS=Cucumis melo OX=3656 GN=LOC103502543 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.8e-27
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 2   SLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPK 61
           SLLS ++  SFR+GRRDI VWNPNPS GF   S F  LLDP +P +  V+ +VW   +PK
Sbjct: 187 SLLSFLKGCSFREGRRDIHVWNPNPSWGF---SMFSLLLDP-APTKELVFDVVWSTNVPK 246

Query: 62  KVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRKAEEDLDHI 108
           KV FF WQVL  + N +DRL R+  +L+G FCC+LC+KAE DLDH+
Sbjct: 247 KVMFFIWQVLLDQVNIVDRLVRRRTSLVGLFCCMLCQKAENDLDHL 288

[Close]

BLAST of Lag0040972 vs. ExPASy TrEMBL
Match: A0A5D3CI74 (Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00980 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.3e-26
Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 1   MSLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIP 60
           ++L+SL+E  SFR GRRD+ VW+P P +GF C+SFF CL++ S+P   SV SL+W++K+P
Sbjct: 188 VALISLLESHSFRLGRRDVTVWSPFPLEGFLCKSFFQCLVN-STPTSESVSSLIWRIKVP 247

Query: 61  KKVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRKAEEDLDHILWHCDFARSVWNN 120
           +K   F+WQV                              EEDLDH+LWHC+    VW++
Sbjct: 248 RKFVLFSWQV------------------------------EEDLDHLLWHCELVSCVWDD 299

Query: 121 LFEIFEFQFARHRDLREMIDEFL 144
             + F   +ARHRD+R  ++EFL
Sbjct: 308 FLQTFGLSYARHRDVRGTVEEFL 299

[Close]

BLAST of Lag0040972 vs. ExPASy TrEMBL
Match: A0A5A7UL95 (Golgin subfamily A member 6-like protein 22 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00300 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.3e-22
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 2   SLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPK 61
           SLL+L++  +F++ RRD+RV  PNPS GF C+S F  LLDP SP    V+ +V + K+PK
Sbjct: 439 SLLTLLDGCNFKEERRDVRVRTPNPSMGFICKSLFILLLDP-SPYFEFVFDVVGRTKVPK 498

Query: 62  KVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRK 100
           KV+FF WQVL GR   +DRL RK  +LI PFCCILCRK
Sbjct: 499 KVRFFNWQVLLGR--VMDRLVRKRTSLISPFCCILCRK 533

[Close]

BLAST of Lag0040972 vs. ExPASy TrEMBL
Match: A0A5D3DA77 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00670 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-21
Identity = 70/168 (41.67%), Postives = 85/168 (50.60%), Query Frame = 0


Query: 2   SLLSLIEDVSFRQGRRDIRVWNPNPSKGFSCRSFFHCLLDPSSPPERSVYSLVWKVKIPK 61
           SLLS ++  SFR+GRRDI VWNPNPS GF   S F  LLDP +P +  V+ +VW   +PK
Sbjct: 384 SLLSFLKGCSFREGRRDIHVWNPNPSWGF---SMFSLLLDP-APTKELVFDVVWSTNVPK 443

Query: 62  KVQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRKAEEDLDHILWHCDFARSVWNNL 121
           KV FF WQVL      LD+                              C FAR VW++ 
Sbjct: 444 KVMFFIWQVL------LDQ-----------------------------DCKFARVVWSSF 503

Query: 122 FEIFEFQFARHRDLREMIDEFLPHPLFGTKEISY---GKLGFVLSFGV 167
            + F   FA  R LR  I+EFL HPLF  K   Y   G +G   +FGV
Sbjct: 504 LQEFGVSFASLRSLRATIEEFLLHPLFKDKGAFYGFPGCVGLFRTFGV 512

[Close]

BLAST of Lag0040972 vs. TAIR 10
Match: AT4G03415.1 (Protein phosphatase 2C family protein )

HSP 1 Score: 57.4 bits (137), Expect = 4.5e-08
Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 525 DFMFEDTIFCVVFDGQGPYSRLVARKVRDTLPTPIK 561
           DFM ED  FC VFDG GPY  LVARKVRDTLP  ++
Sbjct: 89  DFMSEDVTFCGVFDGHGPYGHLVARKVRDTLPVKLQ 124

[Close]

BLAST of Lag0040972 vs. TAIR 10
Match: AT4G03415.2 (Protein phosphatase 2C family protein )

HSP 1 Score: 57.4 bits (137), Expect = 4.5e-08
Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 525 DFMFEDTIFCVVFDGQGPYSRLVARKVRDTLPTPIK 561
           DFM ED  FC VFDG GPY  LVARKVRDTLP  ++
Sbjct: 89  DFMSEDVTFCGVFDGHGPYGHLVARKVRDTLPVKLQ 124

[Close]

BLAST of Lag0040972 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 2.9e-07
Identity = 35/116 (30.17%), Postives = 52/116 (44.83%), Query Frame = 0


Query: 15  GRR--DIRVWNPNPSKGFSCRSFFHCLLD----PSSPPERS------VYSLVWKVKIPKK 74
           GRR  D   W+   S  ++ +S +  L       SSP E S      +Y  +WK +   K
Sbjct: 206 GRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPK 265

Query: 75  VQFFTWQVLHGRANTLDRLARKMPNLIGPFCCILCRKAEEDLDHILWHCDFARSVW 119
           +Q F W+ L         LA +  +L     CI C   +E ++H+L+ C FAR  W
Sbjct: 266 IQHFLWKCLSNSLPVAGALAYR--HLSKESACIRCPSCKETVNHLLFKCTFARLTW 319

[Close]

BLAST of Lag0040972 vs. TAIR 10
Match: AT1G03590.1 (Protein phosphatase 2C family protein )

HSP 1 Score: 53.1 bits (126), Expect = 8.5e-07
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 525 DFMFEDTIFCVVFDGQGPYSRLVARKVRDTLPTPIKVVLLVSSV 569
           DFM +D  FC VFDG GP+  LVARKVRD+L  P+K++ L++S+
Sbjct: 82  DFMSKDVTFCGVFDGHGPHGHLVARKVRDSL--PVKLLSLLNSI 123

[Close]

BLAST of Lag0040972 vs. TAIR 10
Match: AT1G79630.1 (Protein phosphatase 2C family protein )

HSP 1 Score: 51.2 bits (121), Expect = 3.2e-06
Identity = 28/80 (35.00%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 496 PEVVAGTVTVTNYKMGSSFFYRVRLGWPTDFMF--------EDTIFCVVFDGQGPYSRLV 555
           P+V+   V+  + K+   +  + + G   D M         +DT+FC VFDG GP+  +V
Sbjct: 53  PQVLGRLVSNGSSKIACLYTQQGKKGTNQDAMLVFENFCSRDDTVFCGVFDGHGPFGHMV 112

Query: 556 ARKVRDTLPTPIKVVLLVSS 568
           A+KVRDTLP  +   L ++S
Sbjct: 113 AKKVRDTLPFTLLTQLKMTS 132

The following BLAST results are available for this feature:

BLAST of Lag0040972 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29954.1	1.2e-31	51.54	reverse transcriptase [Cucumis melo var. makuwa]	[more]
XP_008464727.1	2.0e-26	56.60	PREDICTED: uncharacterized protein LOC103502543 [Cucumis melo]	[more]
TYK09969.1	1.3e-25	41.26	calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]	[more]
KAA0054311.1	1.5e-21	57.14	golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa...	[more]
KAA0041012.1	7.4e-21	41.67	uncharacterized protein E6C27_scaffold125G002320 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Lag0040972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GY60	6.4e-07	69.44	Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana OX=3702 GN=At4g03415 ...	[more]
Q9LR65	1.2e-05	56.82	Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana OX=3702 GN=PPC6-6 PE=1...	[more]
Q8RXZ4	4.6e-05	35.00	Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana OX=3702 GN=At1g79630 ...	[more]
Q9FG61	1.0e-04	57.14	Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana OX=3702 GN=At5g36250 ...	[more]
Q7XW27	1.7e-04	52.27	Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]

BLAST of Lag0040972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E255	5.9e-32	51.54	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold58...	[more]
A0A1S3CMM8	9.8e-27	56.60	uncharacterized protein LOC103502543 OS=Cucumis melo OX=3656 GN=LOC103502543 PE=...	[more]
A0A5D3CI74	6.3e-26	41.26	Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7UL95	7.3e-22	57.14	Golgin subfamily A member 6-like protein 22 isoform X2 OS=Cucumis melo var. maku...	[more]
A0A5D3DA77	3.6e-21	41.67	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Lag0040972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03415.1	4.5e-08	69.44	Protein phosphatase 2C family protein	[more]
AT4G03415.2	4.5e-08	69.44	Protein phosphatase 2C family protein	[more]
AT4G29090.1	2.9e-07	30.17	Ribonuclease H-like superfamily protein	[more]
AT1G03590.1	8.5e-07	56.82	Protein phosphatase 2C family protein	[more]
AT1G79630.1	3.2e-06	35.00	Protein phosphatase 2C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 30..118 e-value: 1.2E-17 score: 64.3
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 47..134
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 47..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040972.1	Lag0040972.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity