Lag0040940 (gene) Sponge gourd (AG‐4) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACCTCTCTGAGGTGCTTAAAGTTAAAAGTGGAGTCTGACTCAGTCTTGGCAGTCAATTTTATTAATAAAAAAGCTGAAGTATGGTATGCTGTGGAAGCCATTGTGGAGGAGATTTTGAGTATGTCTTAACTTTTCTCAGAAATAGATTTCTGCTATATTCCTAAGCATTGTAATAAGGTAGTAGATGTTATAGCTATGAGAGCAAGAATTTTCAATATTAATGAATCTTGGGTCGGACGATACTCGAGATGGTTGTGTATCAGGGTCGAGGATGATCGTGTTTCTTTTGCCCATGTAGCGTAATAATAGAACATTTATTTTAAATATATATTTAGAGAGAGAGGTTCCAAACAAGTACAAATGACTTTATTAAAAGTGAAAACATTAAAGTGTTTACTTATTTTATTTGATAACTTTACCATACTAAATTTAGCCTAAAAAGTTAATTAGCTTTGAACAAATGTACAAAACAGTTGTTAGAATCTAAAAAGGTTTTGAATATGTAAGGATAAGGGTTTTATCCTTTCATTTTAAAATAACTCAAAGATTTTGTCTTTAGTGATAATTAATTACAAAACTTCAAATGGCTTTGAACTTCAATAATTCTTTAATTTTTGTTCCCCTGCAATTCATAGAAGGAGGAAGAAAATAAGGGGGAAAAAACATAATAATAAAAGCTTCTTCGATTTTTTCATCAATTTGAGCTCAATTTTTTCTTATATAGAGATGTAAGGGACAATGGACATGACACAGATGGAACTATCGAACACACACATATATCTTCACAATGGTATAATATTGTCCGCTTTGGACATGAACCCTCGTAACTTTGTTTTTGGATCACTCCAAAAGGCCTCATGCCAATGAAGATACTTGTCATCTCTTATAAACCCATGATCATCCCCTTATCTAGCCAATGTGGGACTTTGGTCGCACTCCCAACAAGTGGTATCAGAACTCCGTTCGATCCAAAAGTTTGGAGGTTCGTGGTTTAGTGTCTTTGTATTTTCATTCTTTGTTCAGGTTATTCTGTGAGTTATATATTGATTAATGTCTTCAATGTTGACTCGTTTCAGGTTGCTCGATTTGATGGGAATGGTGATTTCGGTTATGGAGAAAGAAGATTAAAGCTCTTTTGGTGCAACAAAAAGTAGCTAAAATCTTGGGTGATGAAAAGGACCTTCCGGCGACACTCTCAGAAGATGATAGGAAGAAAATGGATAAGATTGCCTATTCGACCATTATACTCTATCTCTCAGATGGAGTGCTTAGGCAAGTGAATGAGGTAACTACCACGGTTGAGTTATGGAAGAAGCTAGAGAGCCTTTATCTGACAAAGTCTCTGTCAAATAAGTTATATCTAAATTAGGAGAATTGTAGATATAATCCTCTTGTTTTCTCTCATATGTAAACTTAGAATCGAATGTCATATCCTTTGTTTTTTTATCCATATGTAATATGTCAATGCTAAGTCTTGTAGTCTTCGAAATGTTAAATGAGAGTATTTAATCTTTTGGAAGCATTCTCTTCAATCTTCTGAATGTCCAAAACGATAGATATGACATTCTCTATTTATAGTCTTAGTGAGACTTATGTGAGCTCGAGTTTTATTCAATTTGGGTTAATGAGACTTGTATGAGCTTAGGTTTTGTTCAATTTGGATTCAACCTTTGAATTTGGGATTATCTAGGCTTGACCTATTCCTCTTACATACACTTGAATGGTTTGAGTTTGCACCATTTACTCTGACTCTTTTTGGTCATAGGCCCGATCGCCACATGGCAATATCTGAATGGCAACCTCTCTGAGGTGCTTAAAGTTAAAAGTGGAGTCTGACTCAGTCTTGGCAGTCAATTTTATTAATAAAAAAGCTGAAGTATGGTATGCTGTGGAAGCCATTGTGGAGGAGATTTTGAGTTATTCTAAGATTAAAGCTCTTTTGGTGCAACAAAAAGTAGCTAAAATCTTGGGTGATGAAAAGGACCTTCCGGCGACACTCTCAGAAGATGATAGGAAGAAAATGGATAAGATTGCCTATTCGACCATTATACTCTATCTCTCAGATGGAGTGCTTAGGCAAGTGAATGAGGCCCGATCGCCACATGGCAATATCTGA ATGGCAACCTCTCTGAGGTGCTTAAAGTTAAAAGTGGAGTCTGACTCAGTCTTGGCAGTCAATTTTATTAATAAAAAAGCTGAAGTATGGTATGCTGTGGAAGCCATTGTGGAGGAGATTTTGAGTTATTCTAAGATTAAAGCTCTTTTGGTGCAACAAAAAGTAGCTAAAATCTTGGGTGATGAAAAGGACCTTCCGGCGACACTCTCAGAAGATGATAGGAAGAAAATGGATAAGATTGCCTATTCGACCATTATACTCTATCTCTCAGATGGAGTGCTTAGGCAAGTGAATGAGGCCCGATCGCCACATGGCAATATCTGA MATSLRCLKLKVESDSVLAVNFINKKAEVWYAVEAIVEEILSYSKIKALLVQQKVAKILGDEKDLPATLSEDDRKKMDKIAYSTIILYLSDGVLRQVNEARSPHGNI Homology
BLAST of Lag0040940 vs. NCBI nr
Match: KAA0059158.1 (Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 8.6e-08 Identity = 35/56 (62.50%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of Lag0040940 vs. NCBI nr
Match: KAA0046503.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK01915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07 Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of Lag0040940 vs. NCBI nr
Match: TYK11792.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK13825.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07 Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of Lag0040940 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07 Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of Lag0040940 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07 Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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