Lag0040932 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0040932
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr13: 9998372 .. 10000542 (-)
RNA-Seq ExpressionLag0040932
SyntenyLag0040932
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTAAGTCAGCAAGCAGAACGGTAGGGAGTGGAAAAGTGAGAGCAAGAGGAGAGAGTAGAGAATATAGAATAGTGTTTAGGGATAGAATTCGGGTCCCCCTCTTTAGTGGCGAAGAGGGGTATAAATACCTGCTCATCCTCCTAGGGTTTTTAGGGATTCGGAGGCGTTTTAGGTCAAACCAGGCGGAACCGGGGCGGCCAAAGGCGGTGGGGACCAAATGGAGTCGGACGGGCTCGGCCCGAGCGAGTGGGCCGAGGGTCGGCCTCGGCCAGGCCGAGCAGGGAGTCGGGCCAAAAACCCGACCCCTTCGGTCTCGGCCCGCCCCACTTGCCGGTTTCGCCTCCTGGGTCCAACTCCCAGTCCGATTTCTCTCCGATTGTCCTCGTCAGCTCCTTGTACATCGGAGTGGTCCAAAATTGCCTATAACATATAGTTTAGGGAAATGATCTTACCTAAAAAAAAATTATAGTATGGTACATGAGTTTCTAAAACTTAAACAAATACTTGTGGCATACATTTAAGTTATCATTTCAAAATCAAAGGTAGAAATAGTTGGCTTGTCCAAAAAGGGAAGAAAAAAAGTAGAAATAGTTGGGCAGTTCATTTACTTAAAAATTTAGATTTTTATTCCCAAATTATCCCTGAAAAAACTAGAAATATGATTTGTTTAAGAGTCAAAGTGTTCAAATTGGATTAGATTATGATTGAATTGAATGAGGATCTATTTGTGTCCCCTCATCCTCATTTTTTTGTTGGGTTGACTTTTCAATTAATTGCTTGTCATAAATTACATAATTTTTTTGTCTATTGGCTGGGAAAATCTCTATTAGTACGGATATTCCTTGCATTCAACATTTAACACGTTATTTAATGATCATTTATTTTATTTCATGGATCTCACACTATTTTTAAATGTTTCTTTCACGACAAACAATGAATGAGAGATAGTATGAAAAAATTTCCATACTAGTGTAATGCTAGAAAATTTCTCTTGTTGACCCATGAACTTCTAAGAAATTAATACTTTATTTTATGAATTAAAAAAATATAAGAGGTTTGAATCTCTCATCTTCCCATACTGTTAACTAAAAAAAACTTTAATTCTTATAATATCATGAAAATTTGCATCAAAATTAAGCATTGATTTTTATTATATAATAACTTAGTCTAAGTAGTTTGTTGATCTACATAGGTAAGAAAATTCAATCTTATCACTATTTTTCATGATAAGAAATAAATTATTATAAATTTTAAAATATAAGGATTAGAGATTGTATATTAAAGTTTAAGAATTAAATTGTCGTAGAATTAAAGTATACAAACTAAAGTTCAAAGATTGGATTATTACAAAATTCAAAATACTTCCTCTATTTTCTATGGGTAGGGACTCATGGACTCCTATGGATTTTTGGAATTGGATGACGGAAAATTTGGGTAAAGAGGACCTACCTACGGGAATTATCATCATGTGGTCCATTTCGACATTCAGTAATAAAATAGCAGCAATCAGCAATAATCAAGTTTAAGATATATATCAATCCATACCATATTCTTGCATCCATAGCATTACCCTTGCCTTGCAGAAAGAGAAAGAACAAATCTGAAGCGCCAAAGTTCGAGCAGGCCGAGGAACCAAGCAAGTCAGAATCGGTGGAAAAAGTCTATGCAAAATCGTTGGAAGATGAACATCGATGCTTTGTGGATTGAGGGTCTCAAATGCGGCGACATTGGCTATGTGGTTCGTGACTCAAATGGATCCCTGATCTGTTTCGACATGAAAAGAATTAGTAGAAGATGGAGCATCAAATCGCTAGAAGTAAAAGCGATCCTTGAAGGCCTTAAGAGTATTAGATCTATCTGTTTTCAAAACAAGATTCATCTGGAGGTGGAATTGGATGTGGTTGAAGTCATTCAGGCCATCAATGGCTCCTCTGTTGATCTCATCAAGCTGAAGAATGTTGTGGAAGCCATTGCCACGACATCTCAAGATCTCGATTTTGTGGATTTTCGTTACTGTGCGAGGGAAATCCAACACAGTATCGCACTTTGTAGCCAAAAGAGCATGTTTTTTGTCTTCTGTTCCTCGCTTGAGTCCTTCCTCTTCGTTGGAGAAAGGCGAGATTTTTTGGGCTCCAAATGTGCCAGACTAGATTTTCCATCTAATTAA

mRNA sequence

ATGCTTAAGTCAGCAAGCAGAACGGTAGGGAGTGGAAAAGTGAGAGCAAGAGGAGAGAGTAGAGAATATAGAATAGTGTTTAGGGATAGAATTCGGGTCCCCCTCTTTAGTGGCGAAGAGGGGTATAAATACCTGCTCATCCTCCTAGGGTTTTTAGGGATTCGGAGGCGTTTTAGGTCAAACCAGGCGGAACCGGGGCGGCCAAAGGCGGTGGGGACCAAATGGAGTCGGACGGGCTCGGCCCGAGCGAGTGGGCCGAGGGTCGGCCTCGGCCAGGCCGAGCAGGGAGTCGGGCCAAAAACCCGACCCCTTCGGTCTCGGCCCGCCCCACTTGCCGGTTTCGCCTCCTGGGTCCAACTCCCAGTCCGATTTCTCTCCGATTGTCCTCGTCAGCTCCTTGTACATCGGAGTGGTCCAAAATTGCCTATAACATATAAAAGAGAAAGAACAAATCTGAAGCGCCAAAGTTCGAGCAGGCCGAGGAACCAAGCAAGTCAGAATCGGTGGAAAAAGTCTATGCAAAATCGTTGGAAGATGAACATCGATGCTTTGTGGATTGAGGGTCTCAAATGCGGCGACATTGGCTATGTGGTTCGTGACTCAAATGGATCCCTGATCTGTTTCGACATGAAAAGAATTAGTAGAAGATGGAGCATCAAATCGCTAGAAGTAAAAGCGATCCTTGAAGGCCTTAAGAGTATTAGATCTATCTGTTTTCAAAACAAGATTCATCTGGAGGTGGAATTGGATGTGGTTGAAGTCATTCAGGCCATCAATGGCTCCTCTGTTGATCTCATCAAGCTGAAGAATGTTGTGGAAGCCATTGCCACGACATCTCAAGATCTCGATTTTGTGGATTTTCGTTACTGTGCGAGGGAAATCCAACACAGTATCGCACTTTGTAGCCAAAAGAGCATGTTTTTTGTCTTCTGTTCCTCGCTTGAGTCCTTCCTCTTCGTTGGAGAAAGGCGAGATTTTTTGGGCTCCAAATGTGCCAGACTAGATTTTCCATCTAATTAA

Coding sequence (CDS)

ATGCTTAAGTCAGCAAGCAGAACGGTAGGGAGTGGAAAAGTGAGAGCAAGAGGAGAGAGTAGAGAATATAGAATAGTGTTTAGGGATAGAATTCGGGTCCCCCTCTTTAGTGGCGAAGAGGGGTATAAATACCTGCTCATCCTCCTAGGGTTTTTAGGGATTCGGAGGCGTTTTAGGTCAAACCAGGCGGAACCGGGGCGGCCAAAGGCGGTGGGGACCAAATGGAGTCGGACGGGCTCGGCCCGAGCGAGTGGGCCGAGGGTCGGCCTCGGCCAGGCCGAGCAGGGAGTCGGGCCAAAAACCCGACCCCTTCGGTCTCGGCCCGCCCCACTTGCCGGTTTCGCCTCCTGGGTCCAACTCCCAGTCCGATTTCTCTCCGATTGTCCTCGTCAGCTCCTTGTACATCGGAGTGGTCCAAAATTGCCTATAACATATAAAAGAGAAAGAACAAATCTGAAGCGCCAAAGTTCGAGCAGGCCGAGGAACCAAGCAAGTCAGAATCGGTGGAAAAAGTCTATGCAAAATCGTTGGAAGATGAACATCGATGCTTTGTGGATTGAGGGTCTCAAATGCGGCGACATTGGCTATGTGGTTCGTGACTCAAATGGATCCCTGATCTGTTTCGACATGAAAAGAATTAGTAGAAGATGGAGCATCAAATCGCTAGAAGTAAAAGCGATCCTTGAAGGCCTTAAGAGTATTAGATCTATCTGTTTTCAAAACAAGATTCATCTGGAGGTGGAATTGGATGTGGTTGAAGTCATTCAGGCCATCAATGGCTCCTCTGTTGATCTCATCAAGCTGAAGAATGTTGTGGAAGCCATTGCCACGACATCTCAAGATCTCGATTTTGTGGATTTTCGTTACTGTGCGAGGGAAATCCAACACAGTATCGCACTTTGTAGCCAAAAGAGCATGTTTTTTGTCTTCTGTTCCTCGCTTGAGTCCTTCCTCTTCGTTGGAGAAAGGCGAGATTTTTTGGGCTCCAAATGTGCCAGACTAGATTTTCCATCTAATTAA

Protein sequence

MLKSASRTVGSGKVRARGESREYRIVFRDRIRVPLFSGEEGYKYLLILLGFLGIRRRFRSNQAEPGRPKAVGTKWSRTGSARASGPRVGLGQAEQGVGPKTRPLRSRPAPLAGFASWVQLPVRFLSDCPRQLLVHRSGPKLPITYKRERTNLKRQSSSRPRNQASQNRWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNGSLICFDMKRISRRWSIKSLEVKAILEGLKSIRSICFQNKIHLEVELDVVEVIQAINGSSVDLIKLKNVVEAIATTSQDLDFVDFRYCAREIQHSIALCSQKSMFFVFCSSLESFLFVGERRDFLGSKCARLDFPSN
Homology
BLAST of Lag0040932 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-07
Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 0

Query: 150 TNLKRQSSS------RPRNQASQNRWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNG 209
           TNLK +S++      R     +  RWK    N WK+N DA W      G IG+++RD  G
Sbjct: 54  TNLKGKSANKDLHLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKG 113

Query: 210 SLICFDMKRISRRWSIKSLEVKAILEGLKSIRS-----ICFQNKIHLEVELDVVEVIQAI 269
            +I  D + I    +I  LEV AI EGL++IR      I  ++   + +E D +E I  +
Sbjct: 114 EVIKADCRIIRTERNITYLEVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLL 173

Query: 270 NGSSVDLIKLKNVVEAIATTSQDLDFVDFRYCARE---IQHSIA 300
           +    D  ++  ++E I    +D+  V  R+ +RE   + H +A
Sbjct: 174 HRQCQDQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLA 217

BLAST of Lag0040932 vs. NCBI nr
Match: KAG6599977.1 (hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.9 bits (159), Expect = 7.9e-07
Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 0

Query: 178 KMNIDALWIEGLKCGDIGYVVRDSNGSLICFDMKRISRRWSIKSLEVKAILEGLKSIRSI 237
           K+N  A W E    G + +V+ DS GS IC + K + R+W +K LE KA++EGLK+   I
Sbjct: 7   KLNSYASWSEEAGKGGVSWVIHDSLGSSICIECKELRRKWLVKMLEGKAMIEGLKTYLLI 66

Query: 238 CFQNKIHLEVELDVVEVIQAINGSSVDLIKLKNVVEAI 276
             +   +    +  +E+ + +N + +DLI+L NVV+ I
Sbjct: 67  -RETVSYSHRPIIFLELARILNNTHMDLIELSNVVDEI 103

BLAST of Lag0040932 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-06
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 0

Query: 150 TNLKRQSSS------RPRNQASQNRWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNG 209
           TNLK +S++      R     +  +WK    N WK+N +A W      G IG+++RD  G
Sbjct: 54  TNLKGKSTNKDLHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKG 113

Query: 210 SLICFDMKRISRRWSIKSLEVKAILEGLKSIRSICFQNKIHLEVELDVVEVIQAINGSSV 269
            +I    + I    +I  LEV AI EGL++IR    ++   + +E D +E I  ++    
Sbjct: 114 EVIKASCRIIRAERNITYLEVMAICEGLRAIRQ---EHCRPIHLESDSLEAIHLLHRQCQ 173

Query: 270 DLIKLKNVVEAIATTSQDLDFVDFRYCARE---IQHSIA 300
           D  ++  ++E I    +D++ V  R+ +RE   + H +A
Sbjct: 174 DQTEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLA 209

BLAST of Lag0040932 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-06
Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 0

Query: 168 RWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNGSLICFDMKRISRRWSIKSLEVKAI 227
           +W+    + W +N DA W +    G IG+++R  +G ++    + +    ++K LE  AI
Sbjct: 70  KWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAI 129

Query: 228 LEGLKSIRSICFQNKIHLEVELDVVEVIQAINGSSVDLIKLKNVVEAIATTSQDLDFVDF 287
           LEGL+++ ++     +H  +E D  EV   +N    DL K   VVE I       + + F
Sbjct: 130 LEGLRNLTNLGVLRPLH--IETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAF 189

Query: 288 RYCAREIQ---HSIALCS---QKSMFFVFC 312
               RE     HS+A  +   ++SM +V C
Sbjct: 190 AKVGRETNGCAHSLAQRASVLRESMIWVDC 217

BLAST of Lag0040932 vs. NCBI nr
Match: XP_022148549.1 (uncharacterized protein LOC111017181 [Momordica charantia])

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-05
Identity = 45/154 (29.22%), Postives = 73/154 (47.40%), Query Frame = 0

Query: 150 TNLKRQSSSRPRNQASQNRWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNGSLICFD 209
           TNL    +   +N      W    Q+ WK+N+DA W++ L  G +G++VRDS G  I   
Sbjct: 59  TNLGGNLNMEDKNLPRTVGWTPPAQHLWKLNVDATWMDSLHAGGLGWIVRDSEGRFI--- 118

Query: 210 MKRISRRWSIKSLEVKAILEGLKSI-RSICFQNKIHLEVELDVVEVIQAINGSSVDLIKL 269
                            + E LK++ +S+  +  I +E+E D +EV+  IN SS+ L ++
Sbjct: 119 -----------------MAECLKALSQSLTLEAGIKIEMESDCLEVVNIINKSSMVLTEV 178

Query: 270 KNVVEAIATTSQDLDFVDFRYC---AREIQHSIA 300
             +VE I    + L    F++    A  + H IA
Sbjct: 179 SLIVEDIWKEMESLPIEGFKHLPMKANGVAHGIA 192

BLAST of Lag0040932 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.9e-08
Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 0

Query: 150 TNLKRQSSS------RPRNQASQNRWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNG 209
           TNLK +S++      R     +  RWK    N WK+N DA W      G IG+++RD  G
Sbjct: 54  TNLKGKSANKDLHLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKG 113

Query: 210 SLICFDMKRISRRWSIKSLEVKAILEGLKSIRS-----ICFQNKIHLEVELDVVEVIQAI 269
            +I  D + I    +I  LEV AI EGL++IR      I  ++   + +E D +E I  +
Sbjct: 114 EVIKADCRIIRTERNITYLEVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLL 173

Query: 270 NGSSVDLIKLKNVVEAIATTSQDLDFVDFRYCARE---IQHSIA 300
           +    D  ++  ++E I    +D+  V  R+ +RE   + H +A
Sbjct: 174 HRQCQDQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLA 217

BLAST of Lag0040932 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-07
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 0

Query: 150 TNLKRQSSS------RPRNQASQNRWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNG 209
           TNLK +S++      R     +  +WK    N WK+N +A W      G IG+++RD  G
Sbjct: 54  TNLKGKSTNKDLHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKG 113

Query: 210 SLICFDMKRISRRWSIKSLEVKAILEGLKSIRSICFQNKIHLEVELDVVEVIQAINGSSV 269
            +I    + I    +I  LEV AI EGL++IR    ++   + +E D +E I  ++    
Sbjct: 114 EVIKASCRIIRAERNITYLEVMAICEGLRAIRQ---EHCRPIHLESDSLEAIHLLHRQCQ 173

Query: 270 DLIKLKNVVEAIATTSQDLDFVDFRYCARE---IQHSIA 300
           D  ++  ++E I    +D++ V  R+ +RE   + H +A
Sbjct: 174 DQTEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLA 209

BLAST of Lag0040932 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.5e-07
Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 0

Query: 168 RWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNGSLICFDMKRISRRWSIKSLEVKAI 227
           +W+    + W +N DA W +    G IG+++R  +G ++    + +    ++K LE  AI
Sbjct: 70  KWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAI 129

Query: 228 LEGLKSIRSICFQNKIHLEVELDVVEVIQAINGSSVDLIKLKNVVEAIATTSQDLDFVDF 287
           LEGL+++ ++     +H  +E D  EV   +N    DL K   VVE I       + + F
Sbjct: 130 LEGLRNLTNLGVLRPLH--IETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAF 189

Query: 288 RYCAREIQ---HSIALCS---QKSMFFVFC 312
               RE     HS+A  +   ++SM +V C
Sbjct: 190 AKVGRETNGCAHSLAQRASVLRESMIWVDC 217

BLAST of Lag0040932 vs. ExPASy TrEMBL
Match: A0A6J1D4B6 (uncharacterized protein LOC111017181 OS=Momordica charantia OX=3673 GN=LOC111017181 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.5e-06
Identity = 45/154 (29.22%), Postives = 73/154 (47.40%), Query Frame = 0

Query: 150 TNLKRQSSSRPRNQASQNRWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNGSLICFD 209
           TNL    +   +N      W    Q+ WK+N+DA W++ L  G +G++VRDS G  I   
Sbjct: 59  TNLGGNLNMEDKNLPRTVGWTPPAQHLWKLNVDATWMDSLHAGGLGWIVRDSEGRFI--- 118

Query: 210 MKRISRRWSIKSLEVKAILEGLKSI-RSICFQNKIHLEVELDVVEVIQAINGSSVDLIKL 269
                            + E LK++ +S+  +  I +E+E D +EV+  IN SS+ L ++
Sbjct: 119 -----------------MAECLKALSQSLTLEAGIKIEMESDCLEVVNIINKSSMVLTEV 178

Query: 270 KNVVEAIATTSQDLDFVDFRYC---AREIQHSIA 300
             +VE I    + L    F++    A  + H IA
Sbjct: 179 SLIVEDIWKEMESLPIEGFKHLPMKANGVAHGIA 192

BLAST of Lag0040932 vs. ExPASy TrEMBL
Match: A0A5B7BU49 (RNase H domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041820 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-05
Identity = 48/152 (31.58%), Postives = 70/152 (46.05%), Query Frame = 0

Query: 152 LKRQSSSRPRNQASQNRWKKSMQNRWKMNIDALWIEGLKCGDIGYVVRDSNGSLICFDMK 211
           +++Q  +  R Q     W    +  +K+N+ A W+ G  CG IG V+RD  G +I    K
Sbjct: 35  IRQQVMAVSRVQVGDVVWSPPREGIFKLNVHASWVLGESCGGIGGVIRDWKGEVIGGFAK 94

Query: 212 RISRRWSIKSLEVKAILEGLKSIRSICFQNKIHLEVELDVVEVIQAINGSSVDLIKLKNV 271
           +I     I   E  AIL GL   + +  Q+   L VE D + V+ AI  S  DL +L +V
Sbjct: 95  QIRTCSRIDFAEALAILHGLMFAKDVGLQD---LSVEGDCLSVLIAIESSVEDLSELGHV 154

Query: 272 VEAIATTSQDLDFVDF---RYCAREIQHSIAL 301
            + I          DF   R  A  + H IA+
Sbjct: 155 FDHIKQCRDGFHSCDFGHVRRAANSVAHEIAV 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156777.11.2e-0731.10uncharacterized protein LOC111023608 [Momordica charantia][more]
KAG6599977.17.9e-0736.73hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022143535.11.0e-0629.56uncharacterized protein LOC111013412 [Momordica charantia][more]
XP_022155262.11.8e-0628.67uncharacterized protein LOC111022403 [Momordica charantia][more]
XP_022148549.11.1e-0529.22uncharacterized protein LOC111017181 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DSV15.9e-0831.10uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1CP265.0e-0729.56uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DNV98.5e-0728.67uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1D4B65.5e-0629.22uncharacterized protein LOC111017181 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5B7BU492.1e-0531.58RNase H domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 180..294
e-value: 2.4E-12
score: 46.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..105
NoneNo IPR availablePANTHERPTHR47723OS05G0353850 PROTEINcoord: 150..293

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0040932.1Lag0040932.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity