Lag0040849 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040849
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr13: 8974926 .. 8976761 (-)
RNA-Seq Expression	Lag0040849
Synteny	Lag0040849

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGTGATAGAGCAACAATGAAGGAATTAGCTTGTGTCATTGCTGATGTTCTTCGAGTTTTTGTCCTTGACATTCAAATTCTTGTATTTGATATTCATCTTTACAATTTGGTTTATGTATTTATAGGGTGTGAAGGATATAACACTACGTCCTTTTTACGTGAAGTTATTTAGTTATTTTGAGCAATTTAAGACCATTGAAAGCCATTTGTTTGAAAGTATGAAACTAATTAATGGGCTAGAGTAGTTACAATTGATTTGATTTTATTTGTTTCTTTTATACTTAATTTAGTATATTTGTTAATTCTTTTTTTTTCAACAACATTGGGAGGCGAATTCATTGGTCTGACATCTTGATCGAGAATATACATGCTAATTACCATTTAGTTATGCTTACTTTGACTAGTTTATTTGTTAATTCATCTAGTAAATAAGTCAAATTAATTACATTTATAGTTCCTAACTGCGGATCTAAACATAGTTTGGTCAAGATAATACACCTCAATCAAAAGGTTATATATTCAAATATCTCACCCTATAGATGTTGTTGACCTCTAAAAAAACAGTAGTTACAATTCTAACTTCTTATCAACAAAATGAAAAATTTTAATGCATGAATAGAACGGTTTACACAAAATAAATGTAATGTATAAGTTAAATATATATTTTAGTCACTAAAATACTTTTTCAATTTAGTCCATTTGTTTTAACATTTTTCACTTTAATTTTGCATTGCTAGTTGTTGAAGGAGAAATTTCGGCCAATCACAAGTTGCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGACCAGTTACACATTTACACGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATCAAAGAATGCCACTTGTCTATTAGTGATCCATCAGATAACATCAGCCAAGTTCAATCAGATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTCTGGGGGATTTCAGATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAAGAGTCCAGAGTGGGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGTAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAACCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAAGCCAACAAGCCGATCCAAGAGATCATCAGCCAACAGGCCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGGCCGATCATCCAAGAAGATCAACAAGTCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGACCGATCATCCAAGAAGATCAACAAGCCATAA

mRNA sequence

ATGTGGAGTGATAGAGCAACAATGAAGGAATTAGCTTGTGTCATTGCTGATGTTCTTCGAGTTTTTGTCCTTGACATTCAAATTCTTAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAAGAGTCCAGAGTGGGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAAGATCAACAACCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAAGCCAACAAGCCGATCCAAGAGATCATCAGCCAACAGGCCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGGCCGATCATCCAAGAAGATCAACAAGTCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGACCGATCATCCAAGAAGATCAACAAGCCATAA

Coding sequence (CDS)

ATGTGGAGTGATAGAGCAACAATGAAGGAATTAGCTTGTGTCATTGCTGATGTTCTTCGAGTTTTTGTCCTTGACATTCAAATTCTTAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAAGAGTCCAGAGTGGGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAAGATCAACAACCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAAGCCAACAAGCCGATCCAAGAGATCATCAGCCAACAGGCCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGGCCGATCATCCAAGAAGATCAACAAGTCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGACCGATCATCCAAGAAGATCAACAAGCCATAA

Protein sequence

MWSDRATMKELACVIADVLRVFVLDIQILSQRTQSPEHSAKSPEWAGRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQRSTTQPTDQEDQQVSRPIIQEINKPTDRSRRSTSQQADHPGRSTKPTSRSKRSSANRPIIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANKPIQEIITPTGRSSKKINKPNRSIQEIINLTGRSSKKINKSNRSIQEIINLTDRSSKKINKP

Homology

The following BLAST results are available for this feature:

BLAST of Lag0040849 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0040849 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0040849 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0040849 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040849.1	Lag0040849.1	mRNA