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Lag0040845 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGATATGGGGAAAGTGGTTTCATGCCACACTGTTGGCTCATGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAACTGGTACTCTTATCATCATTTGCTTCTAACTATTTTCCTCTCCTTTCTTAACAAAATCTTGGTTGCTAATTAAAACGATTGCGATATTTTGTCGATAGGTCGTTGTGAATTTTACCGCAACATGGTGTGGCCCGTGTCGTACCATGGCTCCTGTTCTTGATGATTTGGCAAAAAAGACGAGTAATGATGTTATATTCTTAAAAGTGGACGTCGATGAACTCATGGTAAGTTAATCCTATTGACTCATCCTGACTGTCACTAAGAATTAGAAATTAAGTAATTATTAAGAGACAGTCACATTGAAACCACTACGTTTAATTTTTTTTTTCTAGAGCGTTGCGGATGAGTTGGGAGTTGGAGCTCTTCCTTCGTTTCAATTCTTCAAGAATGGAAAACTGGTGGACAAGTTCGTCGGGGCAAGGAAAGATCTGCTGCACAATACTGTATCCAAATATGTTTCATGA ATGGCAGATATGGGGAAAGTGGTTTCATGCCACACTGTTGGCTCATGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAACTGGTCGTTGTGAATTTTACCGCAACATGGTGTGGCCCGTGTCGTACCATGGCTCCTGTTCTTGATGATTTGGCAAAAAAGACGAGTAATGATGTTATATTCTTAAAAGTGGACGTCGATGAACTCATGAGCGTTGCGGATGAGTTGGGAGTTGGAGCTCTTCCTTCGTTTCAATTCTTCAAGAATGGAAAACTGGTGGACAAGTTCGTCGGGGCAAGGAAAGATCTGCTGCACAATACTGTATCCAAATATGTTTCATGA ATGGCAGATATGGGGAAAGTGGTTTCATGCCACACTGTTGGCTCATGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAACTGGTCGTTGTGAATTTTACCGCAACATGGTGTGGCCCGTGTCGTACCATGGCTCCTGTTCTTGATGATTTGGCAAAAAAGACGAGTAATGATGTTATATTCTTAAAAGTGGACGTCGATGAACTCATGAGCGTTGCGGATGAGTTGGGAGTTGGAGCTCTTCCTTCGTTTCAATTCTTCAAGAATGGAAAACTGGTGGACAAGTTCGTCGGGGCAAGGAAAGATCTGCTGCACAATACTGTATCCAAATATGTTTCATGA MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLDDLAKKTSNDVIFLKVDVDELMSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHNTVSKYVS Homology
BLAST of Lag0040845 vs. NCBI nr
Match: XP_038893273.1 (thioredoxin H1-like [Benincasa hispida]) HSP 1 Score: 210.7 bits (535), Expect = 6.7e-51 Identity = 103/114 (90.35%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Lag0040845 vs. NCBI nr
Match: XP_004149943.1 (thioredoxin H1 [Cucumis sativus] >KGN50606.1 hypothetical protein Csa_021443 [Cucumis sativus]) HSP 1 Score: 205.3 bits (521), Expect = 2.8e-49 Identity = 99/114 (86.84%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of Lag0040845 vs. NCBI nr
Match: XP_008464900.1 (PREDICTED: thioredoxin H1-like [Cucumis melo] >TYK21273.1 thioredoxin H1-like [Cucumis melo var. makuwa]) HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48 Identity = 99/114 (86.84%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of Lag0040845 vs. NCBI nr
Match: KAA0051550.1 (thioredoxin H1-like [Cucumis melo var. makuwa]) HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48 Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of Lag0040845 vs. NCBI nr
Match: XP_022942758.1 (thioredoxin H1-like [Cucurbita moschata] >KAG7030692.1 hypothetical protein SDJN02_04729, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 197.6 bits (501), Expect = 5.8e-47 Identity = 96/112 (85.71%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of Lag0040845 vs. ExPASy Swiss-Prot
Match: Q39362 (Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.6e-31 Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 0
BLAST of Lag0040845 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 4.7e-31 Identity = 61/113 (53.98%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Lag0040845 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2) HSP 1 Score: 131.7 bits (330), Expect = 5.2e-30 Identity = 61/111 (54.95%), Postives = 80/111 (72.07%), Query Frame = 0
BLAST of Lag0040845 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 5.2e-30 Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of Lag0040845 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 6.3e-28 Identity = 60/114 (52.63%), Postives = 80/114 (70.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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