Lag0040835 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040835
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotransposon protein
Location	chr13: 8847272 .. 8851295 (-)
RNA-Seq Expression	Lag0040835
Synteny	Lag0040835

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTATTTCCTAACGACGGAGGAAGGGTGGATTCTGGCGGGCATTGGAGTGGGGAGGGGGATTGTGAAGCATGTAGTGGACGTGATTCCATCTTGCCGCTCCATAAACTCGACCCTCTCTCTTGCTGCCTCCAAATTTCCATCAATTTTCTTGTATCGTGGCTTCCTCCCATTCAAAAAAAGTGTTCTCTGTTCTGATTGTGAGGTAGCGTCTGAGGCCTGGTATGAGGGAGGTGGTCGGATGAGTGGAGCTTGGTGGGGGCTTTCATTGTCCACTAAACAGGTTCATTTCTTTAACCTTTGGCCGATGACGATGAATCTGTTTAATGTGTTGAGGTTTTTTGTGCCAATGATATTCTTTAACACCTGAGGCCTCTTTGATTTTGCCACAAACTTTTTTATTTCTTGTATTGTTGGTTCTAAATTTTTCAATGTTTTGCTTATTTGATTCTGATCTTGTTTTGAAAAAAAAAATGTACAATGTTGGCTCTGTTTTGTACCCTCTAATTGAGAATATTGTGGCATAATGTTTGTTTTCTGGATTGAGTTCGAATGAGGAAGATACAATGATAATCTATATAATGTTAGTTCTGTTCTTTTTTATGCAAACAAATTTTTTCTGAGTCTAAGATCTGAGGTCTCCAACTATGCAATTTTATTCAATTTTTTTTTCTATATTGGATGTTGTAGCTTGATATGTTCACTAGTTGGAATTATTTGTTTCAATTCAAGAAAATGAAAAAAAAATGGTTCTGTTCTTTTCCTTCAAACAAATATTTTGTTAGGAGTCTAATATCTAAGGCCTCCTAGTATGCAATCATATTGAATTTGTTGTTGTTTTTTTTTAAAAAAAAATGGATGTTGCATGTAGATATGTTCTAGTAAAAGAATTCAAGTCATTGTTCATTATATTTAGTTGAAATGACCAGGTTGCTGAGTTTATTGTTTCTACTGTTCTTACCTTTCCTTTAAGTAATGGAAGACAATGATGAGGAATATTTAGTTGAAATGACTAGATAGTTGAGTTCTTACTTCACCTTCTTTTAATTAATAAAGTGGAATGATGAAGAGTATTTAGTTGAAATGACTAGTTGAGTTATTGTTGTGTCATCTTTTTATTTTAAACATCTCTTGATGGTACTAATGGTAGTTGGTGAATTAATACCTACTTTTTTTCATCTTTGCTTATAAAATTACCACTCTTCATATCTAAATACGTGTCTTGCCTTCTCACACCAAAGGGGTCCTCTCTTTGGTTAGTCTTTCTCTCCCTTACATGAGTTCATTCTGTTGTATTCTTTAGATGAGGTTTACCTTCTAACTAATGCCTTTGCTTTGTGTTCCTTTTCTTCTGTTTATCTCCAATATCTTTATGGTACGTGGTCTACTCTTGAATGTGCATTTCATATGTCCATGATAACGAATCCTAGAGGTATCTTTCCCTTGACGGTTTTATATACATATTTTTTACTTGTTTTTTCTTATTCAATATCTTTACTTCTACATTGGTTCCTTATTTATTTACTTTATTTTGTAGGTCTTCTTTCCTCATACCCTAGGCCAGGCCGGTCAGTGCAACTTGAAGCTCGTCACCTCCGTAATGTAATTTTTATTTCCATCCACTGCGTGTTTATGTTTTTTAAGTAGAACACTGTTATTTACGAAATTTGCTAAGAACTTCAACTTTTCCATGTTATGGAATTTGTTATGGGTTATCTTTTAGAAGGTTTGTTTTGGTGGATTTTTTCTTTCTTTTATCAATTTTATGATATTTACACTCGGGTTATCTTTGTATGTTACAAGAGTTACAAATTTTTGTTTTGCATGGATGTAAATTTGTGTTATGTTTTTTTTTGGTATAATAATCACAATTGTGATTAGGTTACCTAGATAAAGAAGTAGATGGAAACATGCTTTTAGCCTATTTTAGTCTATTCAAATGAACTTTGGCAATATATTTTTAGATTAAGTTTTAACATAAGGAATATAAATTATGTTTAATATAAACTGTGGGTACGTTACATTGAAAATTTAGGACTAGTTTTGAAAAAAAAACTATTGTTACTTCAACCCAAAAAGATTTAGGACTAAACAAAAACTTACTACTACTTTTTTTTTAAAAAAAAAAAAATCTATTGTTTTAAAGCAAATTAAAGTATGACTAGATTTTTTACTAAAAGAATGTTGGAAATACGTCTTAAAAAAAGAGTGATCTGTGGAAGTTGGAAATAGGCCTTATAAAAAAAGCTATGACTAAATTCCAAAACTTGGATAGTTAGCATTGAAAAATGATTTTGTTTAAAAAAAAGCTTAATGCTACTATTTTTTTAAGAAAAAACTTAATGCTATTATTGTTTTAAAGCAAATTAAACTATGACTAAATTTTTTACTAAAAAAAAAAAGTTGGAACTATATCTTAAATAAATGATTGATCTATGGAAGTTGGAAATATGTCTTAATGCTAATTAATGCATTGAAAATTGATTTTTTTTTTAATAAAAAAAGTCAGTACTATTGTTTCTTTTGTTGGGCTTTCGTCGGAGAGTTACAAGTTATGCTATGAATCTTGTAGCCAAGTTAATTTCTTTCTTGGGGAAGTTCATTAGTCCAAACCATTGAGATAACATACTTATCATAGAAACCAACCTTGGTTTTTTTTTTTCTCAGCAATGGATGACCTTGACATAGAACAAGACGAGTTAATAGCAATACTCGCTATCATATGCACCACACAATACCAATGGATTTTAATTTTCAATTTTATTATGAGTCTGGGAGATCTCACCATAGCAAATCATTCACCCTACGTTAGACACCAAATTAGGCAGCTGAACTTCTTTCGCCTAATTCATGAGAGTGACTTAGCTTGTCGGGAGAGCACTCGAATGGATAGGAGATGTTTCACCATATTATGCACCTTGCTAAGAACAACAGGAGGTTTGTCAGGCACGAATTATGTGGACGTCGAAGAGATGGTGGGGATTTTCCTTCATATTCTAGCGCATGACGTTAAGAACAGAGTAGTTCGACGACACTTTGCTCGATCCGGTGAGACGGTGTCACGACACGTAAACTCTGTTCTTAACGCTGTTATAAGATGCCACGAGATCCTATTGAAGAAACCAGAGCCAGTCACAAATAATTGCACCGATGAGCGATGACGATGGTTCGAGGTAAATAAAATCGTGTCATACAGTAATTATGTTCCGCATTATGAATGCATGAAACGACGACTAAATATTCTTGTCCCTAACAGAATTGTTTGGGTGCGCTCGATGGTACATACATTAAGGTTAACGTAAGCGCAACCGATCGCCCTAGGTACAGGACTAGGAAGGGTGAGGTTGCTACTAATGTACTAGGTGTGTGCTCTCAAAATGGTGAGTTCATCTTCGTACTACCCGGGTGGGAAGGATCTGCTGCAGACGCTCGAGTACTAAGAGATGCAATATCACGACCTACCGGTCTAAGGATCCCTAGGGGTAAAGTGACACACTCTCATTTGTTATATTGTACCAGACATGTGTATGTGGATTATACACTAAAGTTTGATAATCACGTCGATGTCAATGTGGACAGGATACTACTACCTGTGCGATGCAGGTTACCCAAATGCAGAAGGTTTTCTCGCCCCATATCGAGGTCAACGATACCATCTCACCGAGTGGCGTGGAGAACATCCACCAACGACTCCAAAAGAGCTATTCAATATGAGACATTCTTCTGCTAGAAATGTTATTGAGAGAGCCTTTGGAGCGTTGAAGGGTCGGTGGGCAATTCTACGAGGAAGGTCATTTTATCCTGTGCGAGTGCAATGTAGGATGATAACGGCATGTTGCCTCCTACATAATCTGATAATTCGAGAAATGGGACCCGACCCATCCTACGAGGGACATCCTGGAGAAGTTGATTCAAACGGTATGAGTGTCGAGAACATAAACTTTGTGGAACCCACTGGGGCATGGACTGAATGGAGAGACAGTCTTGCAAATCAAATGTTCGAAGATTGGAACGAGGAATGA

mRNA sequence

ATGCGGTATTTCCTAACGACGGAGGAAGGGTGGATTCTGGCGGGCATTGGAGTGGGGAGGGGGATTGTGAAGCATGTAGTGGACGTGATTCCATCTTGCCGCTCCATAAACTCGACCCTCTCTCTTGCTGCCTCCAAATTTCCATCAATTTTCTTGTATCGTGGCTTCCTCCCATTCAAAAAAAGTGTTCTCTGTTCTGATTGTGAGGTAGCGTCTGAGGCCTGGTATGAGGGAGGTGGTCGGATGAGTGGAGCTTGGTGGGGGCTTTCATTGTCCACTAAACAGGTTGCTGAGTTTATTGTTTCTACTGTTCTTACCTTTCCTTTAAATGAGGTTTACCTTCTAACTAATGCCTTTGCTTTGTGTTCCTTTTCTTCTGTTTATCTCCAATATCTTTATGGTACGTGGTCTACTCTTGAATGTGCATTTCATATGTCCATGATAACGAATCCTAGAGGTCTTCTTTCCTCATACCCTAGGCCAGGCCGGTCAGTGCAACTTGAAGCTCGTCACCTCCCAATGGATGACCTTGACATAGAACAAGACGAGTTAATAGCAATACTCGCTATCATATGCACCACACAATACCAATGGATTTTAATTTTCAATTTTATTATGAGTCTGGGAGATCTCACCATAGCAAATCATTCACCCTACGTTAGACACCAAATTAGGCAGCTGAACTTCTTTCGCCTAATTCATGAGAGTGACTTAGCTTGTCGGGAGAGCACTCGAATGGATAGGAGATGTTTCACCATATTATGCACCTTGCTAAGAACAACAGGAGGTTTGTCAGGCACGAATTATGTGGACGTCGAAGAGATGGTGGGGATTTTCCTTCATATTCTAGCGCATGACGTTAAGAACAGAGTAGTTCGACGACACTTTGCTCGATCCGGTGAGACGGTGTCACGACACAATTGTTTGGGTGCGCTCGATGGTACATACATTAAGGTTAACGTAAGCGCAACCGATCGCCCTAGGTACAGGACTAGGAAGGGTGAGGTTGCTACTAATGTACTAGGTGTGTGCTCTCAAAATGGTGAGTTCATCTTCGTACTACCCGGGTGGGAAGGATCTGCTGCAGACGCTCGAGTACTAAGAGATGCAATATCACGACCTACCGGTCTAAGGATCCCTAGGGGATACTACTACCTGTGCGATGCAGGTTACCCAAATGCAGAAGGTTTTCTCGCCCCATATCGAGGTCAACGATACCATCTCACCGAGTGGCGTGGAGAACATCCACCAACGACTCCAAAAGAGCTATTCAATATGAGACATTCTTCTGCTAGAAATGTTATTGAGAGAGCCTTTGGAGCGTTGAAGGGTCGGTGGGCAATTCTACGAGGAAGGTCATTTTATCCTGTGCGAGTGCAATGTAGGATGATAACGGCATGTTGCCTCCTACATAATCTGATAATTCGAGAAATGGGACCCGACCCATCCTACGAGGGACATCCTGGAGAAGTTGATTCAAACGGTATGAGTGTCGAGAACATAAACTTTGTGGAACCCACTGGGGCATGGACTGAATGGAGAGACAGTCTTGCAAATCAAATGTTCGAAGATTGGAACGAGGAATGA

Coding sequence (CDS)

ATGCGGTATTTCCTAACGACGGAGGAAGGGTGGATTCTGGCGGGCATTGGAGTGGGGAGGGGGATTGTGAAGCATGTAGTGGACGTGATTCCATCTTGCCGCTCCATAAACTCGACCCTCTCTCTTGCTGCCTCCAAATTTCCATCAATTTTCTTGTATCGTGGCTTCCTCCCATTCAAAAAAAGTGTTCTCTGTTCTGATTGTGAGGTAGCGTCTGAGGCCTGGTATGAGGGAGGTGGTCGGATGAGTGGAGCTTGGTGGGGGCTTTCATTGTCCACTAAACAGGTTGCTGAGTTTATTGTTTCTACTGTTCTTACCTTTCCTTTAAATGAGGTTTACCTTCTAACTAATGCCTTTGCTTTGTGTTCCTTTTCTTCTGTTTATCTCCAATATCTTTATGGTACGTGGTCTACTCTTGAATGTGCATTTCATATGTCCATGATAACGAATCCTAGAGGTCTTCTTTCCTCATACCCTAGGCCAGGCCGGTCAGTGCAACTTGAAGCTCGTCACCTCCCAATGGATGACCTTGACATAGAACAAGACGAGTTAATAGCAATACTCGCTATCATATGCACCACACAATACCAATGGATTTTAATTTTCAATTTTATTATGAGTCTGGGAGATCTCACCATAGCAAATCATTCACCCTACGTTAGACACCAAATTAGGCAGCTGAACTTCTTTCGCCTAATTCATGAGAGTGACTTAGCTTGTCGGGAGAGCACTCGAATGGATAGGAGATGTTTCACCATATTATGCACCTTGCTAAGAACAACAGGAGGTTTGTCAGGCACGAATTATGTGGACGTCGAAGAGATGGTGGGGATTTTCCTTCATATTCTAGCGCATGACGTTAAGAACAGAGTAGTTCGACGACACTTTGCTCGATCCGGTGAGACGGTGTCACGACACAATTGTTTGGGTGCGCTCGATGGTACATACATTAAGGTTAACGTAAGCGCAACCGATCGCCCTAGGTACAGGACTAGGAAGGGTGAGGTTGCTACTAATGTACTAGGTGTGTGCTCTCAAAATGGTGAGTTCATCTTCGTACTACCCGGGTGGGAAGGATCTGCTGCAGACGCTCGAGTACTAAGAGATGCAATATCACGACCTACCGGTCTAAGGATCCCTAGGGGATACTACTACCTGTGCGATGCAGGTTACCCAAATGCAGAAGGTTTTCTCGCCCCATATCGAGGTCAACGATACCATCTCACCGAGTGGCGTGGAGAACATCCACCAACGACTCCAAAAGAGCTATTCAATATGAGACATTCTTCTGCTAGAAATGTTATTGAGAGAGCCTTTGGAGCGTTGAAGGGTCGGTGGGCAATTCTACGAGGAAGGTCATTTTATCCTGTGCGAGTGCAATGTAGGATGATAACGGCATGTTGCCTCCTACATAATCTGATAATTCGAGAAATGGGACCCGACCCATCCTACGAGGGACATCCTGGAGAAGTTGATTCAAACGGTATGAGTGTCGAGAACATAAACTTTGTGGAACCCACTGGGGCATGGACTGAATGGAGAGACAGTCTTGCAAATCAAATGTTCGAAGATTGGAACGAGGAATGA

Protein sequence

MRYFLTTEEGWILAGIGVGRGIVKHVVDVIPSCRSINSTLSLAASKFPSIFLYRGFLPFKKSVLCSDCEVASEAWYEGGGRMSGAWWGLSLSTKQVAEFIVSTVLTFPLNEVYLLTNAFALCSFSSVYLQYLYGTWSTLECAFHMSMITNPRGLLSSYPRPGRSVQLEARHLPMDDLDIEQDELIAILAIICTTQYQWILIFNFIMSLGDLTIANHSPYVRHQIRQLNFFRLIHESDLACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFARSGETVSRHNCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRGYYYLCDAGYPNAEGFLAPYRGQRYHLTEWRGEHPPTTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSFYPVRVQCRMITACCLLHNLIIREMGPDPSYEGHPGEVDSNGMSVENINFVEPTGAWTEWRDSLANQMFEDWNEE

Homology

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BLAST of Lag0040835 vs. NCBI nr
Match: KAA0065306.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 468.8 bits (1205), Expect = 6.3e-128
Identity = 222/313 (70.93%), Postives = 251/313 (80.19%), Query Frame = 0


Query: 246 MDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFARSGETVSR 305
           MDRRCFTILCT+LRT GGL  T YVDVEEM+ IFLHI+AHDVKNRV RRHFARSGETVSR
Sbjct: 1   MDRRCFTILCTMLRTKGGLEATQYVDVEEMIAIFLHIVAHDVKNRVTRRHFARSGETVSR 60

Query: 306 H-------------------------------NCLGALDGTYIKVNVSATDRPRYRTRKG 365
           H                                CLGALDGT+IKVNVS +DRPRYR+RKG
Sbjct: 61  HFNAVLRLHEILLKQPDPVTYSCSHEKWRWFQKCLGALDGTHIKVNVSMSDRPRYRSRKG 120

Query: 366 EVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRGYYYLCDAGYPNA 425
           ++ TNVLGVC QNGEFIFV+PGWEGSA+D+RVLRDA+SR TGL++P+GYYYLCDAGYPNA
Sbjct: 121 DITTNVLGVCLQNGEFIFVMPGWEGSASDSRVLRDAVSRLTGLKVPKGYYYLCDAGYPNA 180

Query: 426 EGFLAPYRGQRYHLTEWRGEHPPTTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSF 485
           EGFLAPYRGQRYHLTEWRG +PP  PKELFNMRHS ARNVIERAFG+L  RW IL+GRS+
Sbjct: 181 EGFLAPYRGQRYHLTEWRGGNPPKCPKELFNMRHSFARNVIERAFGSLNCRWTILQGRSY 240

Query: 486 YPVRVQCRMITACCLLHNLIIREMGPDPSY-EGHPGEVDSNGMSVENINFVEPTGAWTEW 527
           Y V +QC++ITACCLLHNLI REMG + ++ E H GE DS+ M++ENINFVE T  WTEW
Sbjct: 241 YLVDIQCKIITACCLLHNLIHREMGSEATFKEPHLGEGDSSEMNIENINFVETTNVWTEW 300

[Close]

BLAST of Lag0040835 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 456.1 bits (1172), Expect = 4.2e-124
Identity = 229/386 (59.33%), Postives = 277/386 (71.76%), Query Frame = 0


Query: 179 IEQDELIAILAIICTTQYQWILIFNFIMSLGDLTIANHSPY-VRHQIRQLNFFRLIHESD 238
           +++ EL +I+     +Q Q +L+   + +  D     H PY  RH+IRQL +FR+IH SD
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKN--DTKRITHIPYETRHRIRQLAYFRMIHGSD 60

Query: 239 LACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFA 298
           L CR+STRMDRRCF ILC LLRT  GL+ T  VDVEEMV +FLHILAHDVKNRV++R F 
Sbjct: 61  LVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFM 120

Query: 299 RSGETVSRH-----------------------------------NCLGALDGTYIKVNVS 358
           RSGET+SRH                                   NCLGALDGTYIKVNV 
Sbjct: 121 RSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVP 180

Query: 359 ATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRG 418
           A+DR RYRTRKGEVATNVLGVC   G+F++VL GWEGSAAD+R+LRDA+SRP  L++P+G
Sbjct: 181 ASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKG 240

Query: 419 YYYLCDAGYPNAEGFLAPYRGQRYHLTEWRG-EHPPTTPKELFNMRHSSARNVIERAFGA 478
           YYYL DAGYPNAEGFLAPYRGQRYHL EWRG E+ P+T KE FNM+HSSARNVIERAFG 
Sbjct: 241 YYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGV 300

Query: 479 LKGRWAILRGRSFYPVRVQCRMITACCLLHNLIIREMGPDPSYEGHPGEVDSN--GMSVE 526
           LKGRWAILRG+S+YPV VQCR I ACCLLHNLI REM  +   E +  EVDS     + +
Sbjct: 301 LKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAAD 360

[Close]

BLAST of Lag0040835 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 456.1 bits (1172), Expect = 4.2e-124
Identity = 229/386 (59.33%), Postives = 277/386 (71.76%), Query Frame = 0


Query: 179 IEQDELIAILAIICTTQYQWILIFNFIMSLGDLTIANHSPY-VRHQIRQLNFFRLIHESD 238
           +++ EL +I+     +Q Q +L+   + +  D     H PY  RH+IRQL +FR+IH SD
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKN--DTKRITHIPYETRHRIRQLAYFRMIHGSD 60

Query: 239 LACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFA 298
           L CR+STRMDRRCF ILC LLRT  GL+ T  VDVEEMV +FLHILAHDVKNRV++R F 
Sbjct: 61  LVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFM 120

Query: 299 RSGETVSRH-----------------------------------NCLGALDGTYIKVNVS 358
           RSGET+SRH                                   NCLGALDGTYIKVNV 
Sbjct: 121 RSGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVP 180

Query: 359 ATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRG 418
           A+DR RYRTRKGEVATNVLGVC   G+F++VL GWEGSAAD+R+LRDA+SRP  L++P+G
Sbjct: 181 ASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKG 240

Query: 419 YYYLCDAGYPNAEGFLAPYRGQRYHLTEWRG-EHPPTTPKELFNMRHSSARNVIERAFGA 478
           YYYL DAGYPNAEGFLAPYRGQRYHL EWRG E+ P+T KE FNM+HSSARNVIERAFG 
Sbjct: 241 YYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGV 300

Query: 479 LKGRWAILRGRSFYPVRVQCRMITACCLLHNLIIREMGPDPSYEGHPGEVDSN--GMSVE 526
           LKGRWAILRG+S+YPV VQCR I ACCLLHNLI REM  +   E +  EVDS     + +
Sbjct: 301 LKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAAD 360

[Close]

BLAST of Lag0040835 vs. NCBI nr
Match: KAA0047510.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 452.2 bits (1162), Expect = 6.1e-123
Identity = 227/386 (58.81%), Postives = 274/386 (70.98%), Query Frame = 0


Query: 179 IEQDELIAILAIICTTQYQWILIFNFIMSLGDLTIANHSPY-VRHQIRQLNFFRLIHESD 238
           +++ EL +I+     +Q Q +L+   + +  D     H PY  RH+IRQL +FR+IH SD
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKN--DTKRITHIPYETRHRIRQLAYFRMIHGSD 60

Query: 239 LACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFA 298
           L CRESTRMDRRCF ILC LLRT  GL+ T  VDVEEMV +FLHILAHDVKNRV++R F 
Sbjct: 61  LVCRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFM 120

Query: 299 RSGETVSRH-----------------------------------NCLGALDGTYIKVNVS 358
           RSGET+S H                                   NCLGALDGTYIKVNV 
Sbjct: 121 RSGETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVP 180

Query: 359 ATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRG 418
           A+DR RYRTRKGEVATNVLGVC + G+F++VL GWEGSAAD+R+LRDA+SRP GL++P+G
Sbjct: 181 ASDRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKG 240

Query: 419 YYYLCDAGYPNAEGFLAPYRGQRYHLTEWRG-EHPPTTPKELFNMRHSSARNVIERAFGA 478
           YYYL DAGYPN EGFLAPYRGQRYHL EW G E+ P+T KE FNM+H SARNVIERAFG 
Sbjct: 241 YYYLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGV 300

Query: 479 LKGRWAILRGRSFYPVRVQCRMITACCLLHNLIIREMGPDPSYEGHPGEVDSN--GMSVE 526
           LKGRWAILRG+S+YPV VQCR I ACCLLHNLI REM  +   E +  EVDS     + +
Sbjct: 301 LKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAAD 360

[Close]

BLAST of Lag0040835 vs. NCBI nr
Match: TYK08067.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 452.2 bits (1162), Expect = 6.1e-123
Identity = 214/306 (69.93%), Postives = 244/306 (79.74%), Query Frame = 0


Query: 246 MDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFARSGETVSR 305
           MD+RCFTILCT+LRT GGL  T YVDVEEM  IFLHI+AHDVKNRV RRHFARS  TVSR
Sbjct: 1   MDQRCFTILCTMLRTRGGLEATQYVDVEEMTAIFLHIVAHDVKNRVARRHFARSDATVSR 60

Query: 306 ------------------------HNCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVL 365
                                   H+C  ALDGT+IKVNVS +D PRYR+RK ++ TNVL
Sbjct: 61  HFNVVLNAVLRIHEILLKQPDQVTHSC--ALDGTHIKVNVSMSDHPRYRSRKSDITTNVL 120

Query: 366 GVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRGYYYLCDAGYPNAEGFLAPY 425
           G+CSQNGEFIFV+PGWEGSA+D+RVLRD +SRP GL++P+GYYYLCDA Y N EGFLAPY
Sbjct: 121 GLCSQNGEFIFVMPGWEGSASDSRVLRDVVSRPIGLKVPKGYYYLCDASYLNVEGFLAPY 180

Query: 426 RGQRYHLTEWRGEHPPTTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSFYPVRVQC 485
           RGQRYHL EWRG +PP  PKELFNMRHSSARNVIERAFG+LK RWAILRGRS+YPV +QC
Sbjct: 181 RGQRYHLIEWRGGNPPKCPKELFNMRHSSARNVIERAFGSLKSRWAILRGRSYYPVDIQC 240

Query: 486 RMITACCLLHNLIIREMGPDPSY-EGHPGEVDSNGMSVENINFVEPTGAWTEWRDSLANQ 527
           ++ITACCLLHNLI REM  + ++ E H GE DS+ M++ENINFVE T  WTEWRD+LANQ
Sbjct: 241 KIITACCLLHNLIHREMSSEATFEEPHLGEDDSSEMNIENINFVETTNVWTEWRDNLANQ 300

[Close]

BLAST of Lag0040835 vs. ExPASy Swiss-Prot
Match: Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.0e-16
Identity = 59/186 (31.72%), Postives = 87/186 (46.77%), Query Frame = 0


Query: 307 NCLGALDGTYIKVNVSATDRPRYRTRKGE--VATNVLGVCSQNGEFIFVLPGWEGSAADA 366
           NC GA+D T+I +N+ A +        GE   +  +  V   +  F+ V+ GW GS  D 
Sbjct: 182 NCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLNDD 241

Query: 367 RVLRDA--------ISRPTGLRIPRG------YYYLCDAGYPNAEGFLAPYRGQRYHLTE 426
            VL+++          R  G ++P         Y + D+G+P     L PY+G+      
Sbjct: 242 VVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLLTPYQGK------ 301

Query: 427 WRGEHPPTTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSFYPVRVQC-RMITACCL 476
                P + P+  FN RHS A    + A   LK RW I+ G  + P R +  R+I  CCL
Sbjct: 302 -----PTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVCCL 356

[Close]

BLAST of Lag0040835 vs. ExPASy Swiss-Prot
Match: Q94K49 (Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-09
Identity = 52/185 (28.11%), Postives = 78/185 (42.16%), Query Frame = 0


Query: 307 NCLGALDGTYIKVNVSATD-RPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADAR 366
           NC GA+D T+I + + A      +  ++   +  + GV      F+ ++ GW G    ++
Sbjct: 178 NCCGAIDTTHIIMTLPAVQASDDWCDQEKNYSMFLQGVFDHEMRFLNMVTGWPGGMTVSK 237

Query: 367 VLRDAISRPTGLRIPRGYYYLCD-----AGYPNAEGFLAPYR-----GQRYHLTEW---- 426
           +L+ +           G++ LC+      G P      A  R     G  Y L  W    
Sbjct: 238 LLKFS-----------GFFKLCENAQILDGNPKTLSQGAQIREYVVGGISYPLLPWLITP 297

Query: 427 RGEHPPTTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSFYPVRVQC-RMITACCLL 476
                P+     FN RH   R+V   AF  LKG W IL    + P R +   +I  CCLL
Sbjct: 298 HDSDHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRILSKVMWRPDRRKLPSIILVCCLL 351

[Close]

BLAST of Lag0040835 vs. ExPASy TrEMBL
Match: A0A5A7VG45 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00220 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 3.1e-128
Identity = 222/313 (70.93%), Postives = 251/313 (80.19%), Query Frame = 0


Query: 246 MDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFARSGETVSR 305
           MDRRCFTILCT+LRT GGL  T YVDVEEM+ IFLHI+AHDVKNRV RRHFARSGETVSR
Sbjct: 1   MDRRCFTILCTMLRTKGGLEATQYVDVEEMIAIFLHIVAHDVKNRVTRRHFARSGETVSR 60

Query: 306 H-------------------------------NCLGALDGTYIKVNVSATDRPRYRTRKG 365
           H                                CLGALDGT+IKVNVS +DRPRYR+RKG
Sbjct: 61  HFNAVLRLHEILLKQPDPVTYSCSHEKWRWFQKCLGALDGTHIKVNVSMSDRPRYRSRKG 120

Query: 366 EVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRGYYYLCDAGYPNA 425
           ++ TNVLGVC QNGEFIFV+PGWEGSA+D+RVLRDA+SR TGL++P+GYYYLCDAGYPNA
Sbjct: 121 DITTNVLGVCLQNGEFIFVMPGWEGSASDSRVLRDAVSRLTGLKVPKGYYYLCDAGYPNA 180

Query: 426 EGFLAPYRGQRYHLTEWRGEHPPTTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSF 485
           EGFLAPYRGQRYHLTEWRG +PP  PKELFNMRHS ARNVIERAFG+L  RW IL+GRS+
Sbjct: 181 EGFLAPYRGQRYHLTEWRGGNPPKCPKELFNMRHSFARNVIERAFGSLNCRWTILQGRSY 240

Query: 486 YPVRVQCRMITACCLLHNLIIREMGPDPSY-EGHPGEVDSNGMSVENINFVEPTGAWTEW 527
           Y V +QC++ITACCLLHNLI REMG + ++ E H GE DS+ M++ENINFVE T  WTEW
Sbjct: 241 YLVDIQCKIITACCLLHNLIHREMGSEATFKEPHLGEGDSSEMNIENINFVETTNVWTEW 300

[Close]

BLAST of Lag0040835 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 229/386 (59.33%), Postives = 277/386 (71.76%), Query Frame = 0


Query: 179 IEQDELIAILAIICTTQYQWILIFNFIMSLGDLTIANHSPY-VRHQIRQLNFFRLIHESD 238
           +++ EL +I+     +Q Q +L+   + +  D     H PY  RH+IRQL +FR+IH SD
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKN--DTKRITHIPYETRHRIRQLAYFRMIHGSD 60

Query: 239 LACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFA 298
           L CR+STRMDRRCF ILC LLRT  GL+ T  VDVEEMV +FLHILAHDVKNRV++R F 
Sbjct: 61  LVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFM 120

Query: 299 RSGETVSRH-----------------------------------NCLGALDGTYIKVNVS 358
           RSGET+SRH                                   NCLGALDGTYIKVNV 
Sbjct: 121 RSGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVP 180

Query: 359 ATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRG 418
           A+DR RYRTRKGEVATNVLGVC   G+F++VL GWEGSAAD+R+LRDA+SRP  L++P+G
Sbjct: 181 ASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKG 240

Query: 419 YYYLCDAGYPNAEGFLAPYRGQRYHLTEWRG-EHPPTTPKELFNMRHSSARNVIERAFGA 478
           YYYL DAGYPNAEGFLAPYRGQRYHL EWRG E+ P+T KE FNM+HSSARNVIERAFG 
Sbjct: 241 YYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGV 300

Query: 479 LKGRWAILRGRSFYPVRVQCRMITACCLLHNLIIREMGPDPSYEGHPGEVDSN--GMSVE 526
           LKGRWAILRG+S+YPV VQCR I ACCLLHNLI REM  +   E +  EVDS     + +
Sbjct: 301 LKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAAD 360

[Close]

BLAST of Lag0040835 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 229/386 (59.33%), Postives = 277/386 (71.76%), Query Frame = 0


Query: 179 IEQDELIAILAIICTTQYQWILIFNFIMSLGDLTIANHSPY-VRHQIRQLNFFRLIHESD 238
           +++ EL +I+     +Q Q +L+   + +  D     H PY  RH+IRQL +FR+IH SD
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKN--DTKRITHIPYETRHRIRQLAYFRMIHGSD 60

Query: 239 LACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFA 298
           L CR+STRMDRRCF ILC LLRT  GL+ T  VDVEEMV +FLHILAHDVKNRV++R F 
Sbjct: 61  LVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFM 120

Query: 299 RSGETVSRH-----------------------------------NCLGALDGTYIKVNVS 358
           RSGET+SRH                                   NCLGALDGTYIKVNV 
Sbjct: 121 RSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVP 180

Query: 359 ATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRG 418
           A+DR RYRTRKGEVATNVLGVC   G+F++VL GWEGSAAD+R+LRDA+SRP  L++P+G
Sbjct: 181 ASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKG 240

Query: 419 YYYLCDAGYPNAEGFLAPYRGQRYHLTEWRG-EHPPTTPKELFNMRHSSARNVIERAFGA 478
           YYYL DAGYPNAEGFLAPYRGQRYHL EWRG E+ P+T KE FNM+HSSARNVIERAFG 
Sbjct: 241 YYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGV 300

Query: 479 LKGRWAILRGRSFYPVRVQCRMITACCLLHNLIIREMGPDPSYEGHPGEVDSN--GMSVE 526
           LKGRWAILRG+S+YPV VQCR I ACCLLHNLI REM  +   E +  EVDS     + +
Sbjct: 301 LKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAAD 360

[Close]

BLAST of Lag0040835 vs. ExPASy TrEMBL
Match: A0A5A7TWH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001380 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 3.0e-123
Identity = 227/386 (58.81%), Postives = 274/386 (70.98%), Query Frame = 0


Query: 179 IEQDELIAILAIICTTQYQWILIFNFIMSLGDLTIANHSPY-VRHQIRQLNFFRLIHESD 238
           +++ EL +I+     +Q Q +L+   + +  D     H PY  RH+IRQL +FR+IH SD
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKN--DTKRITHIPYETRHRIRQLAYFRMIHGSD 60

Query: 239 LACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFA 298
           L CRESTRMDRRCF ILC LLRT  GL+ T  VDVEEMV +FLHILAHDVKNRV++R F 
Sbjct: 61  LVCRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFM 120

Query: 299 RSGETVSRH-----------------------------------NCLGALDGTYIKVNVS 358
           RSGET+S H                                   NCLGALDGTYIKVNV 
Sbjct: 121 RSGETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVP 180

Query: 359 ATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRG 418
           A+DR RYRTRKGEVATNVLGVC + G+F++VL GWEGSAAD+R+LRDA+SRP GL++P+G
Sbjct: 181 ASDRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKG 240

Query: 419 YYYLCDAGYPNAEGFLAPYRGQRYHLTEWRG-EHPPTTPKELFNMRHSSARNVIERAFGA 478
           YYYL DAGYPN EGFLAPYRGQRYHL EW G E+ P+T KE FNM+H SARNVIERAFG 
Sbjct: 241 YYYLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGV 300

Query: 479 LKGRWAILRGRSFYPVRVQCRMITACCLLHNLIIREMGPDPSYEGHPGEVDSN--GMSVE 526
           LKGRWAILRG+S+YPV VQCR I ACCLLHNLI REM  +   E +  EVDS     + +
Sbjct: 301 LKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM-TNFDIEDNIDEVDSTHATTAAD 360

[Close]

BLAST of Lag0040835 vs. ExPASy TrEMBL
Match: A0A5D3C7X6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002160 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 3.0e-123
Identity = 214/306 (69.93%), Postives = 244/306 (79.74%), Query Frame = 0


Query: 246 MDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKNRVVRRHFARSGETVSR 305
           MD+RCFTILCT+LRT GGL  T YVDVEEM  IFLHI+AHDVKNRV RRHFARS  TVSR
Sbjct: 1   MDQRCFTILCTMLRTRGGLEATQYVDVEEMTAIFLHIVAHDVKNRVARRHFARSDATVSR 60

Query: 306 ------------------------HNCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVL 365
                                   H+C  ALDGT+IKVNVS +D PRYR+RK ++ TNVL
Sbjct: 61  HFNVVLNAVLRIHEILLKQPDQVTHSC--ALDGTHIKVNVSMSDHPRYRSRKSDITTNVL 120

Query: 366 GVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTGLRIPRGYYYLCDAGYPNAEGFLAPY 425
           G+CSQNGEFIFV+PGWEGSA+D+RVLRD +SRP GL++P+GYYYLCDA Y N EGFLAPY
Sbjct: 121 GLCSQNGEFIFVMPGWEGSASDSRVLRDVVSRPIGLKVPKGYYYLCDASYLNVEGFLAPY 180

Query: 426 RGQRYHLTEWRGEHPPTTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSFYPVRVQC 485
           RGQRYHL EWRG +PP  PKELFNMRHSSARNVIERAFG+LK RWAILRGRS+YPV +QC
Sbjct: 181 RGQRYHLIEWRGGNPPKCPKELFNMRHSSARNVIERAFGSLKSRWAILRGRSYYPVDIQC 240

Query: 486 RMITACCLLHNLIIREMGPDPSY-EGHPGEVDSNGMSVENINFVEPTGAWTEWRDSLANQ 527
           ++ITACCLLHNLI REM  + ++ E H GE DS+ M++ENINFVE T  WTEWRD+LANQ
Sbjct: 241 KIITACCLLHNLIHREMSSEATFEEPHLGEDDSSEMNIENINFVETTNVWTEWRDNLANQ 300

[Close]

BLAST of Lag0040835 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-44
Identity = 99/285 (34.74%), Postives = 145/285 (50.88%), Query Frame = 0


Query: 230 FRLIHESDLACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDVKN 289
           +++++  +  C E+ RMD+  F  LC LL+T G L  TN + +E  + IFL I+ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 290 RVVRRHFARSGETVSRH---------------------------------NCLGALDGTY 349
           R V+  F  SGET+SRH                                 +C+G +D  +
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPYFKDCVGVVDSFH 151

Query: 350 IKVNVSATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARVLRDAISRPTG 409
           I V V   ++  +R   G +  NVL   S +  F +VL GWEGSA+D +VL  A++R   
Sbjct: 152 IPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNK 211

Query: 410 LRIPRGYYYLCDAGYPNAEGFLAPYRGQRYHLTEWRGEHPPTTPKELFNMRHSSARNVIE 469
           L++P+G YY+ D  YPN  GF+APY G   +  E          KE+FN RH      I 
Sbjct: 212 LQVPQGKYYIVDNKYPNLPGFIAPYHGVSTNSRE--------EAKEMFNERHKLLHRAIH 271

Query: 470 RAFGALKGRWAILRGRSFYPVRVQCRMITACCLLHNLIIREMGPD 482
           R FGALK R+ IL     YP++ Q +++ A C LHN +  E   D
Sbjct: 272 RTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDD 308

[Close]

BLAST of Lag0040835 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-32
Identity = 78/190 (41.05%), Postives = 105/190 (55.26%), Query Frame = 0


Query: 350 FIFVLPGWEGSAADARVLRDAISRPTGLRIPRGYYYLCDAGYPNAEGFLAPYRGQRYHLT 409
           FI+VL GWEGSA D+RVL DA+ +          +YL D G+ N   FLAP+RG RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 410 EWRGE-HPPTTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSFYPVRVQCRMITACC 469
           E+ G+   P TP ELFN+RH S RNVIER FG  K R+AI +    +  + Q  ++  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 470 LLHNLIIREMGPD----PSYEGHPGEV---DSNGMSVENINFVEPTGAWTE-------WR 525
            LHN + +E   D    P   G+ G+V   + N M+   I+  EP  A  +       WR
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWR 204

[Close]

BLAST of Lag0040835 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-28
Identity = 81/266 (30.45%), Postives = 115/266 (43.23%), Query Frame = 0


Query: 228 NFFRLIHESDLACRESTRMDRRCFTILCTLLRTTGGLSGTNYVDVEEMVGIFLHILAHDV 287
           N +R + +   AC +  RM   CFT LC +L+T   L  T  + +EE V +FL I  H+ 
Sbjct: 54  NIWRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNE 113

Query: 288 KNRVVRRHFARSGETVSR------------------------------------------ 347
             R V   F R+ ETV R                                          
Sbjct: 114 VYRDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYF 173

Query: 348 HNCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADAR 407
              +GA+DGT++ V V    +  Y  R    + N++ +C     F ++  G  GS  D  
Sbjct: 174 SGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTA 233

Query: 408 VLRDAISRPTGLRIPRG-YYYLCDAGYPNAEGFLAPYRGQ-----RYHLTEWRGEHPPTT 446
           VL+ A    +   +P    YYL D+GYPN +G LAPYR       RYH++++     P  
Sbjct: 234 VLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPRPRN 293

[Close]

BLAST of Lag0040835 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-14
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 307 NCLGALDGTYIKVNVSATDRPRYRTRKGEVATNVLGVCSQNGEFIFVLPGWEGSAADARV 366
           +C+GA+D T+I   VS    P +R RKG+++ N+L  C+ + EF++VL GWEGSA D++V
Sbjct: 24  DCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSKV 83

Query: 367 LRDAISRPTG-LRIP---RGYYYLCDAGYPNAEGFLAPYRGQRYHLTEWR 413
           L DA++R +  L +P        + +    N +  L     QR +  +WR
Sbjct: 84  LNDALTRNSNRLPVPEEDESAEEVVEEVNDNNDEVLTTQDQQREYANQWR 133

[Close]

BLAST of Lag0040835 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-13
Identity = 52/186 (27.96%), Postives = 88/186 (47.31%), Query Frame = 0


Query: 307 NCLGALDGTYI-----KVNVSATDRPRY--RTRKGEVATNVLGVCSQNGEFIFVLPGWEG 366
           N +G++  T+I     K++V++    R+  R +K   +  +  V +  G F  +  GW G
Sbjct: 284 NVVGSMYTTHIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPG 343

Query: 367 SAADARVLRDAI--SRPTGLRIPRGYYYLCDAGYPNAEGFLAPYRGQRYHLTEWRGEHPP 426
           S  D +VL  ++   R     + +G +     G+P  +  L PY  Q             
Sbjct: 344 SMPDDKVLEKSLLYQRANNGGLLKGMWVAGGPGHPLLDWVLVPYTQQNL----------- 403

Query: 427 TTPKELFNMRHSSARNVIERAFGALKGRWAILRGRSFYPVRVQCRMITACCLLHNLI-IR 483
           T  +  FN + S  + V + AFG LKGRWA L+ R+   ++    ++ ACC+LHN+  +R
Sbjct: 404 TWTQHAFNEKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNICEMR 458

The following BLAST results are available for this feature:

BLAST of Lag0040835 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065306.1	6.3e-128	70.93	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035620.1	4.2e-124	59.33	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]
KAA0046727.1	4.2e-124	59.33	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]
KAA0047510.1	6.1e-123	58.81	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK08067.1	6.1e-123	69.93	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0040835 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2U3	3.0e-16	31.72	Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1	[more]
Q94K49	2.1e-09	28.11	Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Lag0040835 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VG45	3.1e-128	70.93	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TXW1	2.0e-124	59.33	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BDX0	2.0e-124	59.33	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TWH8	3.0e-123	58.81	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3C7X6	3.0e-123	69.93	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lag0040835 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.6e-44	34.74	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G35695.1	1.1e-32	41.05	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	1.6e-28	30.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28950.1	1.3e-14	36.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G12010.1	1.4e-13	27.96	unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 312..472 e-value: 1.1E-25 score: 90.2
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 214..307 coord: 306..475
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 214..307 coord: 306..475

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040835.1	Lag0040835.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding