
Lag0040829 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTTGTAGAGCCAAGAAACTTCGATGGGAAAAATTTTGAGTGTTGGAAAATGCAAGTCAATGATTACCTAACTTGCAAGAAAATACATAAGGCATTGAAGGAGAGACCGAAAGGGATGACGAACGAAGATTGGGAAGCTTTGGATGAAGAGGCAGTTGCAAGCATAAGGATGTGTTTGTCAATGGACGTGGCAAGTCTAGTGGCCCATGAGACAACTGCAGTTAAATTGATGGAAGCGCTTACAAATAGGTATGAAAAACCCTCGGCTAATAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGATGCTTCTGTGAATTCCTATATTAATGAGGTTACCACTTTGTTTAATCGGTTAAAATCTGTTAAGATAGAATTTATTGATGAGGTGAATGCTATTCAGTTGTTAACGTCTTTACCTGATAGTTGGGAAACGATGAAGACAACATTGTCTAATTCGACTGGAAATAATACTTTAAAATTTTTAAAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGTAG ATGGGTTTTGTAGAGCCAAGAAACTTCGATGGGAAAAATTTTGAGTGTTGGAAAATGCAAGTCAATGATTACCTAACTTGCAAGAAAATACATAAGGCATTGAAGGAGAGACCGAAAGGGATGACGAACGAAGATTGGGAAGCTTTGGATGAAGAGGCAGTTGCAAGCATAAGGATGTGTTTGTCAATGGACGTGGCAAGTCTAGTGGCCCATGAGACAACTGCAGTTAAATTGATGGAAGCGCTTACAAATAGGTATGAAAAACCCTCGGCTAATAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGATGCTTCTGTGAATTCCTATATTAATGAGGTTACCACTTTGTTTAATCGGTTAAAATCTGTTAAGATAGAATTTATTGATGAGGTGAATGCTATTCAGTTGTTAACGTCTTTACCTGATAGTTGGGAAACGATGAAGACAACATTGTCTAATTCGACTGGAAATAATACTTTAAAATTTTTAAAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGTAG ATGGGTTTTGTAGAGCCAAGAAACTTCGATGGGAAAAATTTTGAGTGTTGGAAAATGCAAGTCAATGATTACCTAACTTGCAAGAAAATACATAAGGCATTGAAGGAGAGACCGAAAGGGATGACGAACGAAGATTGGGAAGCTTTGGATGAAGAGGCAGTTGCAAGCATAAGGATGTGTTTGTCAATGGACGTGGCAAGTCTAGTGGCCCATGAGACAACTGCAGTTAAATTGATGGAAGCGCTTACAAATAGGTATGAAAAACCCTCGGCTAATAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGATGCTTCTGTGAATTCCTATATTAATGAGGTTACCACTTTGTTTAATCGGTTAAAATCTGTTAAGATAGAATTTATTGATGAGGTGAATGCTATTCAGTTGTTAACGTCTTTACCTGATAGTTGGGAAACGATGAAGACAACATTGTCTAATTCGACTGGAAATAATACTTTAAAATTTTTAAAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGTAG MGFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKKFFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR Homology
BLAST of Lag0040829 vs. NCBI nr
Match: KAE8691144.1 (hypothetical protein F3Y22_tig00110893pilonHSYRG01319 [Hibiscus syriacus]) HSP 1 Score: 176.8 bits (447), Expect = 1.7e-40 Identity = 92/182 (50.55%), Postives = 130/182 (71.43%), Query Frame = 0
BLAST of Lag0040829 vs. NCBI nr
Match: KAG7593230.1 (Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 176.4 bits (446), Expect = 2.2e-40 Identity = 87/174 (50.00%), Postives = 121/174 (69.54%), Query Frame = 0
BLAST of Lag0040829 vs. NCBI nr
Match: KAG7584790.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 176.4 bits (446), Expect = 2.2e-40 Identity = 87/174 (50.00%), Postives = 121/174 (69.54%), Query Frame = 0
BLAST of Lag0040829 vs. NCBI nr
Match: TKR90717.1 (hypothetical protein D5086_0000230290 [Populus alba]) HSP 1 Score: 176.4 bits (446), Expect = 2.2e-40 Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 0
BLAST of Lag0040829 vs. NCBI nr
Match: KAE8678064.1 (Glycosyltransferase, CAZy family GT8 [Hibiscus syriacus]) HSP 1 Score: 176.4 bits (446), Expect = 2.2e-40 Identity = 91/182 (50.00%), Postives = 130/182 (71.43%), Query Frame = 0
BLAST of Lag0040829 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 5.5e-18 Identity = 59/182 (32.42%), Postives = 96/182 (52.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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