Homology
BLAST of Lag0040826 vs. NCBI nr
Match:
KAA0057507.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 675.6 bits (1742), Expect = 6.9e-190
Identity = 420/1192 (35.23%), Postives = 612/1192 (51.34%), Query Frame = 0
Query: 38 GNKNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSD 97
G K I+VP+G D GW +FLA++TF+ T R +P + SS SD
Sbjct: 75 GRKCSILVPEGPDSFGWKSFLALITFRSSAP-TKRIRSEIRKEP---VSTFSDSFSSDSD 134
Query: 98 SSQRSYADVLKNPSEVESGPSGGENDLSGIKGQFNKTGETEFSFEWN---KVVILSRRCF 157
SS++SYA VL + SE ++ + + G F+ N K VI++RRCF
Sbjct: 135 SSRKSYAKVLSDSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKTVIITRRCF 194
Query: 158 HDDWTRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNR---GWVTIGHFYVK 217
HDDW RI +R+ ++ SY PF ADKAIL+L + D A+LLC N+ GW T+G++ VK
Sbjct: 195 HDDWNRIMFSLRKQSEIAFSYKPFQADKAILFL-NPDHAKLLCSNKGANGWSTVGNYQVK 254
Query: 218 YEKWEPGKHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDL 277
+E W+ H +IPSYGGW++FRGIPLH WN TF +G ACGGF++V+K T + L
Sbjct: 255 FESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKL 314
Query: 278 IDVVIKIKENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAME 337
ID IK++ N+ GF+PA+I I D++GE + V TV P +A+W + RN +VHG+F AA E
Sbjct: 315 IDAKIKVRYNYIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADE 374
Query: 338 YDEYDVKSEPFTFRGEAAC-----------TVYELNAVADSLNASCLNNSNNVVRPSKRS 397
+D+++ +E +T+ G A +++ + + S + N+++
Sbjct: 375 FDQHNHLAETYTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYDPFD 434
Query: 398 LPAATISKDKGK-----------KSAQAPRRIVSVDLGYLSP------------------ 457
+ K+KGK ++ +RI + + +LSP
Sbjct: 435 QQLSDRRKEKGKAILIINDQDHGHYSKRSKRISNRKVSFLSPGGIQSNSSNTEINTKGKS 494
Query: 458 -----ISDP---------------AFSSPEDPPSSNQHSKDSSPSTIAQDSLKTLLQVDM 517
I+D + +DP S + K S T + S + L VDM
Sbjct: 495 LEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHKLSLKET-GEGSKQMNLSVDM 554
Query: 518 N--------MDINQRPGSDEI-NIGQEQNEKRNDLMYKKQLNEWLLE---NNFCLVPTKC 577
+ G D N + N K D K L + E N +
Sbjct: 555 GPISPLESMIQSENNHGLDTFNNQTPDGNSKSTDSAEAKNLTVSVKEGADQNKSASRSTA 614
Query: 578 LSEDVNVTVNNH---DVMGPDNIVILTETKISSISKKLIKSLWSS----ISINWSALD-- 637
+ + D + +VI + +S K + SS + ++ +D
Sbjct: 615 EGNSKDAKTGSELEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSYFPVIVSDQNMDIA 674
Query: 638 ---SIGKSGGILILWDELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPASRRNRKN 697
+G GGIL+LWD+ N + G +S+S+N +G WWL+ +YGP +R
Sbjct: 675 GHGPLGDKGGILVLWDDTNFKVNDIKVGNYSISLNILNTNG-NWWLTSVYGPYKYNDRTK 734
Query: 698 FWTELHDLGGLCNDCWLLGGDFNVFRWNHETSSPRPAKKSMRRFNSSLMIFRLLTRPSL- 757
W EL L LC WL+ GDFN+ RW ET++ K++M FN+ + + L+ P L
Sbjct: 735 LWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFISVNELIDPPPLN 794
Query: 758 -------MAITP------------------------------------VLENPEFRWGPC 817
+ + P +LE+P+ +WGPC
Sbjct: 795 NNFTWSNLRVNPTYSRLDRFLLSKGWENAFGLHTSRTLERNISDHFPILLESPQIKWGPC 854
Query: 818 PFRFDNYLLHEKDFTKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKRKNRDLLKSQ 877
PFR +N L +K+F KN WW+S+ Q GFPGY+FI+ L L IK W+ +L +
Sbjct: 855 PFRLNNSSLRDKEFQKNFINWWNSSKQAGFPGYAFIQSLNSLSKFIKEWQHNKVNLYDAN 914
Query: 878 KQIISDEIVKIDRLENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDE 937
K+ + EI ID+LE G ++ QKR SLKSDL + + ++W QR ++ W GDE
Sbjct: 915 KKALLKEIDIIDKLEFQGEMSTTHHQKRISLKSDLLSIENNQAQIWHQRARQRWNLLGDE 974
Query: 938 NTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPTSEGWMVSNL 997
N ++FH++CT +R+ I + G SL + + I+HF NIY + E ++ NL
Sbjct: 975 NNSYFHRICTINQRKNLIKSICDPAGTSLDSIDDISRTFISHFQNIYTKESYEEILIDNL 1034
Query: 998 NWCPISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSW----------- 1057
+W PIS S L +PF E E+ + + + K+PGPDG+T+ F++K W
Sbjct: 1035 SWNPISRLCQSELCKPFDESEIKSTIMSFSNEKAPGPDGYTMLFYKKHWPDLKDDLLNVF 1094
Query: 1058 ------------------IAITQLWKCSMTSIRKDFRPISLTTVLYRLIAKTLAERLKST 1067
I++ KCS S D+RPISLTT LY+++AK LA RLKS
Sbjct: 1095 KDFHKAGIVNNNVNNTFIALISKKEKCSKPS---DYRPISLTTSLYKIMAKALANRLKSA 1154
BLAST of Lag0040826 vs. NCBI nr
Match:
TYK08190.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 674.1 bits (1738), Expect = 2.0e-189
Identity = 419/1192 (35.15%), Postives = 611/1192 (51.26%), Query Frame = 0
Query: 38 GNKNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSD 97
G K I+VP+G D GW +FLA++TF+ T R +P + SS SD
Sbjct: 75 GRKCSILVPEGPDSFGWKSFLALITFRSSAP-TKRIRSEIRKEP---VSTFSDSFSSDSD 134
Query: 98 SSQRSYADVLKNPSEVESGPSGGENDLSGIKGQFNKTGETEFSFEWN---KVVILSRRCF 157
SS++SYA VL + SE ++ + + G F+ N K VI++RRCF
Sbjct: 135 SSRKSYAKVLSDSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKTVIITRRCF 194
Query: 158 HDDWTRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNR---GWVTIGHFYVK 217
HDDW RI +R+ ++ SY PF ADKAIL+L + D A+LLC N+ GW T+G++ VK
Sbjct: 195 HDDWNRIMFSLRKQSEIAFSYKPFQADKAILFL-NPDHAKLLCSNKGANGWSTVGNYQVK 254
Query: 218 YEKWEPGKHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDL 277
+E W+ H +IPSYGGW++FRGIPLH WN TF +G ACGGF++V+K T + L
Sbjct: 255 FESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKL 314
Query: 278 IDVVIKIKENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAME 337
ID IK++ N+ GF+PA+I I D++GE + V TV P +A+W + RN +VHG+F AA E
Sbjct: 315 IDAKIKVRYNYIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADE 374
Query: 338 YDEYDVKSEPFTFRGEAAC-----------TVYELNAVADSLNASCLNNSNNVVRPSKRS 397
+D+++ +E +T+ G A +++ + + S + N+++
Sbjct: 375 FDQHNHLAETYTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYDPFD 434
Query: 398 LPAATISKDKGK-----------KSAQAPRRIVSVDLGYLSP------------------ 457
+ K+KGK ++ +RI + + +LSP
Sbjct: 435 QQLSDRRKEKGKAILIINDQDHGHYSKRSKRISNRKVSFLSPGGIQSNSSNTEINTKGKS 494
Query: 458 -----ISDP---------------AFSSPEDPPSSNQHSKDSSPSTIAQDSLKTLLQVDM 517
I+D + +DP S + K S T + S + L VDM
Sbjct: 495 LEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHKLSLKET-GEGSKQMNLSVDM 554
Query: 518 N--------MDINQRPGSDEI-NIGQEQNEKRNDLMYKKQLNEWLLE---NNFCLVPTKC 577
+ G D N + N K D K L + E N +
Sbjct: 555 GPISPLESMIQSENNHGLDTFNNQTPDGNSKSTDSAEAKNLTVSVKEGADQNKSASRSTA 614
Query: 578 LSEDVNVTVNNH---DVMGPDNIVILTETKISSISKKLIKSLWSS----ISINWSALD-- 637
+ + D + +VI + +S K + SS + ++ +D
Sbjct: 615 EGNSKDAKTGSELEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSYFPVIVSDQNMDIA 674
Query: 638 ---SIGKSGGILILWDELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPASRRNRKN 697
+G GGIL+LWD+ N + G +S+S+N +G WWL+ +YGP +R
Sbjct: 675 GHGPLGDKGGILVLWDDTNFKVNDIKVGNYSISLNILNTNG-NWWLTSVYGPYKYNDRTK 734
Query: 698 FWTELHDLGGLCNDCWLLGGDFNVFRWNHETSSPRPAKKSMRRFNSSLMIFRLLTRPSL- 757
W EL L LC WL+ GDFN+ RW ET++ K++M FN+ + + L+ P L
Sbjct: 735 LWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFISVNELIDPPPLN 794
Query: 758 -------MAITP------------------------------------VLENPEFRWGPC 817
+ + P +LE+P+ +WGPC
Sbjct: 795 NNFTWSNLRVNPTYSRLDRFLLSKGWENAFGLHTSRTLERNISDHFPILLESPQIKWGPC 854
Query: 818 PFRFDNYLLHEKDFTKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKRKNRDLLKSQ 877
PFR +N L +K+F KN WW+S+ Q GFPGY+FI+ L L IK W+ +L +
Sbjct: 855 PFRLNNSSLRDKEFQKNFINWWNSSKQAGFPGYAFIQSLNSLSKFIKEWQHNKVNLYDAN 914
Query: 878 KQIISDEIVKIDRLENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDE 937
K+ + EI ID+LE G ++ QKR SLKSDL + + ++W QR ++ W GDE
Sbjct: 915 KKALLKEIDIIDKLEFQGEMSTTHHQKRISLKSDLLSIENNQAQIWHQRARQRWNLLGDE 974
Query: 938 NTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPTSEGWMVSNL 997
N ++FH++CT +R+ I + G SL + + I+HF NIY + E ++ NL
Sbjct: 975 NNSYFHRICTINQRKNLIKSICDPAGTSLDSIDDISRTFISHFQNIYTKESYEEILIDNL 1034
Query: 998 NWCPISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSW----------- 1057
+W PIS S L +PF E E+ + + + K+PGPDG+T+ F++K W
Sbjct: 1035 SWNPISRLCQSELCKPFDESEIKSTIMSFSNEKAPGPDGYTMLFYKKHWPDLKDDLLNVF 1094
Query: 1058 ------------------IAITQLWKCSMTSIRKDFRPISLTTVLYRLIAKTLAERLKST 1067
I++ KCS S D+RPISLTT LY+++AK LA RLKS
Sbjct: 1095 KDFHKAGIVNNNVNNTFIALISKKEKCSKPS---DYRPISLTTSLYKIMAKALANRLKSA 1154
BLAST of Lag0040826 vs. NCBI nr
Match:
KAA0039309.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 656.0 bits (1691), Expect = 5.6e-184
Identity = 411/1199 (34.28%), Postives = 614/1199 (51.21%), Query Frame = 0
Query: 40 KNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSDSS 99
K+CI+VP+G ++S W +FL+M+T K + + + PR P + R P D
Sbjct: 105 KSCILVPEGLEKSCWVSFLSMITPKVEVKAKTRPIFLPRSSP---EFRLSPP----IDYH 164
Query: 100 QRSYAD-VLKNPSEVESGPSGGENDLSGIKGQFNKTGETEFSFEWNKVVILSRRCFHDDW 159
+RSYA V + S + S S + N ++ F V+L RR FHDDW
Sbjct: 165 KRSYAKAVSEGRSSISSDSSDSYASSDSSQSSGNSPCDSPFPVLLENTVVLVRRFFHDDW 224
Query: 160 TRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNRGWVTIGHFYVKYEKWEPG 219
+I + +R+ + +Y+ FHA+K +++ S+ A LLC+N+GW T+G + V++EKW P
Sbjct: 225 QKILQNLRKQTEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPA 284
Query: 220 KHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDLIDVVIKI 279
H PKLIPSYGGW FRGIPLH WNM TF Q+G ACGG I+V++ T +LI+ +KI
Sbjct: 285 SHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKI 344
Query: 280 KENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAMEYDEYDVK 339
+ N+ GF+PA + I D +G + V+ V + KW + RN ++HGTF R AA +D+++
Sbjct: 345 RYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPD 404
Query: 340 SEPFTFRGEAACTVYELNAVADSLNASCLNN----SNNVVRPSKRSLPAATI-------- 399
SE F F G A + LN ++ S + + +++P+K + T+
Sbjct: 405 SEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDN 464
Query: 400 ---------------------SKDKGKKSAQAPRRIVSVDLGYL--------SPISDPAF 459
S DKGK+ P ++ S + Y SP + F
Sbjct: 465 SLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTF 524
Query: 460 SSPEDPPSSNQHSKDSSPSTIAQDSLKTLLQ-VDMNMDINQRPGSDEINIGQEQNEKRND 519
+P+ P++ HS + + S+K + + NQ G+ I Q +D
Sbjct: 525 FNPDSAPAN--HSPEKKKRVSRERSVKKKSSTIQPKLRANQGKGN---LITQPLQVVAHD 584
Query: 520 L-MYKKQLNEWL-LENNFCLVPTKCLSEDVN------VTVNNHDVMGPDNIVILTETKIS 579
L KK L+ + L N L P+K + + + + N +V+ + +T+ + S
Sbjct: 585 LDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKS 644
Query: 580 SISKKL-------------------------------------IKSLWSSISINWSA--- 639
+ S ++ +K +SI+ +
Sbjct: 645 NSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGA 704
Query: 640 -------LDSIGKS-GGILILWDELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPA 699
+G S GGILILWD + S + +G FSLS NF + WWL+G+YGP
Sbjct: 705 TTSTNALFSQLGSSAGGILILWDAQHHSLLSQEEGKFSLSANFSSFNN-SWWLTGLYGPV 764
Query: 700 SRRNRKNFWTELHDLGGLCNDCWLLGGDFNVFRWNHETSSPRPAKKSMRRFNSSLM---- 759
RR R N W +LH+L L + W++GGD NV R E+++ + S N +
Sbjct: 765 KRRERLNVWEDLHNLHHLNSSPWIIGGDLNVVRMREESTAVTFSSHSSNMLNDFISNNLL 824
Query: 760 ----------------------------------------IFRLLTRPSLMAITPVLEN- 819
I R L RP+ V E+
Sbjct: 825 IDPPLTNNRYTWSNLRNPPTFSRLDRFLYNSRWEILFNPHITRTLPRPTSDHFPLVCEDS 884
Query: 820 -PEFRWGPCPFRFDNYLLHEKDFTKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKR 879
RWGP PFR ++ L++ +F +N++ WW+ + Q G PG+ FI+RLK L + IK W++
Sbjct: 885 TSTLRWGPAPFRLNSIALNDPEFKRNMERWWELSVQNGHPGFFFIQRLKSLANLIKPWQK 944
Query: 880 KNRDLLKSQKQIISDEIVKIDRLENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCK 939
+ L S K+ I E+ ID+ E L+ + +R +LK++L+ +S++E + W QR K
Sbjct: 945 EKFQSLTSAKENIIREVDSIDKNELDTPLSLEESNRRLALKAELNDLSLKESQFWFQRAK 1004
Query: 940 KTWLKEGDENTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPT 999
K WLKEGDEN+ FFH++C++R++R I E+ G T++ + L +NHFS IY+ T
Sbjct: 1005 KLWLKEGDENSAFFHRICSSRQKRNLIHEIQDEEGSIQNTNNNISLAFVNHFSRIYRCST 1064
Query: 1000 -SEGWMVSNLNWCPISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSW- 1059
+ + NL W PI S+ S L PFSE E+ +K+ NK+PGPDGF + FF+ W
Sbjct: 1065 KKDPLFIENLEWNPIDYSDWSLLCAPFSEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWH 1124
Query: 1060 -------------------------IAITQLWKCSMTSIRKDFRPISLTTVLYRLIAKTL 1067
I + K S KDFRPISLTT +Y+ IAKTL
Sbjct: 1125 LLKEDILDIFKDFFEKGVINKNMNNTYIALIEKKKDYSHPKDFRPISLTTSIYKTIAKTL 1184
BLAST of Lag0040826 vs. NCBI nr
Match:
TYK00493.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 656.0 bits (1691), Expect = 5.6e-184
Identity = 411/1199 (34.28%), Postives = 614/1199 (51.21%), Query Frame = 0
Query: 40 KNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSDSS 99
K+CI+VP+G ++S W +FL+M+T K + + + PR P + R P D
Sbjct: 105 KSCILVPEGLEKSCWVSFLSMITPKVEVKAKTRPIFLPRSSP---EFRLSPP----IDYH 164
Query: 100 QRSYAD-VLKNPSEVESGPSGGENDLSGIKGQFNKTGETEFSFEWNKVVILSRRCFHDDW 159
+RSYA V + S + S S + N ++ F V+L RR FHDDW
Sbjct: 165 KRSYAKAVSEGRSSISSDSSDSYASSDSSQSSGNSPCDSPFPVLLENTVVLVRRFFHDDW 224
Query: 160 TRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNRGWVTIGHFYVKYEKWEPG 219
+I + +R+ + +Y+ FHA+K +++ S+ A LLC+N+GW T+G + V++EKW P
Sbjct: 225 QKILQNLRKQTEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPA 284
Query: 220 KHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDLIDVVIKI 279
H PKLIPSYGGW FRGIPLH WNM TF Q+G ACGG I+V++ T +LI+ +KI
Sbjct: 285 SHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKI 344
Query: 280 KENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAMEYDEYDVK 339
+ N+ GF+PA + I D +G + V+ V + KW + RN ++HGTF R AA +D+++
Sbjct: 345 RYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPD 404
Query: 340 SEPFTFRGEAACTVYELNAVADSLNASCLNN----SNNVVRPSKRSLPAATI-------- 399
SE F F G A + LN ++ S + + +++P+K + T+
Sbjct: 405 SEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDN 464
Query: 400 ---------------------SKDKGKKSAQAPRRIVSVDLGYL--------SPISDPAF 459
S DKGK+ P ++ S + Y SP + F
Sbjct: 465 SLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTF 524
Query: 460 SSPEDPPSSNQHSKDSSPSTIAQDSLKTLLQ-VDMNMDINQRPGSDEINIGQEQNEKRND 519
+P+ P++ HS + + S+K + + NQ G+ I Q +D
Sbjct: 525 FNPDSAPAN--HSPEKKKRVSRERSVKKKSSTIQPKLRANQGKGN---LITQPLQVVAHD 584
Query: 520 L-MYKKQLNEWL-LENNFCLVPTKCLSEDVN------VTVNNHDVMGPDNIVILTETKIS 579
L KK L+ + L N L P+K + + + + N +V+ + +T+ + S
Sbjct: 585 LDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKS 644
Query: 580 SISKKL-------------------------------------IKSLWSSISINWSA--- 639
+ S ++ +K +SI+ +
Sbjct: 645 NSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGA 704
Query: 640 -------LDSIGKS-GGILILWDELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPA 699
+G S GGILILWD + S + +G FSLS NF + WWL+G+YGP
Sbjct: 705 TTSTNALFSQLGSSAGGILILWDAQHHSLLSQEEGKFSLSANFSSFNN-SWWLTGLYGPV 764
Query: 700 SRRNRKNFWTELHDLGGLCNDCWLLGGDFNVFRWNHETSSPRPAKKSMRRFNSSLM---- 759
RR R N W +LH+L L + W++GGD NV R E+++ + S N +
Sbjct: 765 KRRERLNVWEDLHNLHHLNSSPWIIGGDLNVVRMREESTAVTFSSHSSNMLNDFISNNLL 824
Query: 760 ----------------------------------------IFRLLTRPSLMAITPVLEN- 819
I R L RP+ V E+
Sbjct: 825 IDPPLTNNRYTWSNLRNPPTFSRLDRFLYNSRWEILFNPHITRTLPRPTSDHFPLVCEDS 884
Query: 820 -PEFRWGPCPFRFDNYLLHEKDFTKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKR 879
RWGP PFR ++ L++ +F +N++ WW+ + Q G PG+ FI+RLK L + IK W++
Sbjct: 885 TSTLRWGPAPFRLNSIALNDPEFKRNMERWWELSVQNGHPGFFFIQRLKSLANLIKPWQK 944
Query: 880 KNRDLLKSQKQIISDEIVKIDRLENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCK 939
+ L S K+ I E+ ID+ E L+ + +R +LK++L+ +S++E + W QR K
Sbjct: 945 EKFQSLTSAKENIIREVDSIDKNELDTPLSLEESNRRLALKAELNDLSLKESQFWFQRAK 1004
Query: 940 KTWLKEGDENTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPT 999
K WLKEGDEN+ FFH++C++R++R I E+ G T++ + L +NHFS IY+ T
Sbjct: 1005 KLWLKEGDENSAFFHRICSSRQKRNLIHEIQDEEGSIQNTNNNISLAFVNHFSRIYRCST 1064
Query: 1000 -SEGWMVSNLNWCPISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSW- 1059
+ + NL W PI S+ S L PFSE E+ +K+ NK+PGPDGF + FF+ W
Sbjct: 1065 KKDPLFIENLEWNPIDYSDWSLLCAPFSEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWH 1124
Query: 1060 -------------------------IAITQLWKCSMTSIRKDFRPISLTTVLYRLIAKTL 1067
I + K S KDFRPISLTT +Y+ IAKTL
Sbjct: 1125 LLKEDILDIFKDFFEKGVINKNMNNTYIALIEKKKDYSHPKDFRPISLTTSIYKTIAKTL 1184
BLAST of Lag0040826 vs. NCBI nr
Match:
TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 654.4 bits (1687), Expect = 1.6e-183
Identity = 410/1210 (33.88%), Postives = 603/1210 (49.83%), Query Frame = 0
Query: 40 KNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSDSS 99
K+CI+VP+G D+SGW +FL+M+T K + + PR P D R P D
Sbjct: 159 KSCILVPEGPDKSGWVSFLSMITPKVEVKAKTRPTFLPRTSP---DCRLSPP----IDYH 218
Query: 100 QRSYADVLKNPSEVESGPSGGENDLS-GIKGQFNKTGETEFSFEWNKVVILSRRCFHDDW 159
+RSYA + + S D S N ++ S V++ RR FHDDW
Sbjct: 219 KRSYAKAVTEGRPFATSDSSDSYDSSDSSHSSSNSFCDSPSSDLLENTVVIVRRFFHDDW 278
Query: 160 TRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNRGWVTIGHFYVKYEKWEPG 219
+I + +R+ + +Y+ FHA+KA+++ S+ A LLC+N+GW T+G + V++EKW P
Sbjct: 279 HKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGWSTVGKYSVRFEKWSPV 338
Query: 220 KHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDLIDVVIKI 279
H PKLIPSYGGW FRGIPLH WNM TF Q+G AC G I+V++ T +LI+ IK+
Sbjct: 339 YHATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKV 398
Query: 280 KENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAMEYDEYDVK 339
+ N+ GF+PA + I D++G + V+ V + KW I RN ++HGTF R AA +D+++ +
Sbjct: 399 RYNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKWLIERNVRLHGTFKRQAAASFDDFNPE 458
Query: 340 SEPFTFRGEAACTVYELNAVADS----------------------------LNASCLNNS 399
SE F F G A + L+ +D LN +N+S
Sbjct: 459 SEQFFFEGSEAISPDFLSTSSDGRKSSTPDQPSALKSVIIKPDRNATLPSFLNEELVNDS 518
Query: 400 NNVVRPSKRSLPAAT-ISK----DKGKKSAQ---APRRIVSVD-----LGYLSPISDPAF 459
N +K L + IS DKGK+ P +++D + + SP +
Sbjct: 519 NLHATANKSKLEILSGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNI 578
Query: 460 SSPEDPPSSNQHS----------------KDSSPST--------------------IAQD 519
+P+ P+++ S K S ST +A D
Sbjct: 579 FNPDSAPANHSPSLNSPEKKQKVSRERSIKKKSSSTQPNSKANQNKGVFITQPIQIVAHD 638
Query: 520 ------------SLKTLLQVDMNMDINQRPGSDEINI----------------------- 579
L L +D N + SD +
Sbjct: 639 RDAAKKGLSLTVDLGDLPALDPNKSLEDHHNSDNAEVVDITNTEVVPETPEMKMPVNENS 698
Query: 580 ----------------------GQEQNEKRNDL-MYKKQLNEWLLENNFCLVPTKCLSED 639
+E+ EK D +KKQL WL +N L ++
Sbjct: 699 NSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKKNGLKLSTD---TDS 758
Query: 640 VNVTVNNHDVMGPDNIVILTETKISSISKKLIKSLWSSISINWSALDSIGKSGGILILWD 699
T + + ++ N + + +K++IKSLW S SINW A ++ G SGGILILWD
Sbjct: 759 SGATTSTNVLLNQMN------SGLKITNKRIIKSLWPSNSINWIAKNASGSSGGILILWD 818
Query: 700 ELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPASRRNRKNFWTELHDLGGLCNDCW 759
N S + +G+FSLS NF L + WWL+G+YGP RR R +FW ELH+L L + W
Sbjct: 819 AQNHSLLSQEEGLFSLSANFLLNNNSSWWLTGLYGPVKRRERIHFWAELHNLQHLNSFPW 878
Query: 760 LLGGDFNVFRWNHETSSPRPAKKSMRRFN----SSLMIFRLLTR-----------PSLMA 819
+LGGD NV R E++S + + R N ++L+I LT P+
Sbjct: 879 ILGGDLNVIRMREESTSVLSSSHNSRMLNNFISNNLLIDPPLTNNRFTWSNLRNPPTFSR 938
Query: 820 ITPVL-------------------------------ENPEFRWGPCPFRFDNYLLHEKDF 879
I L NP+ WGP PFR ++ L + +F
Sbjct: 939 IDRFLYNSSWENLFSPHTTRTLPRSTSDHFPLVCEDSNPKLSWGPIPFRLNSITLSDPEF 998
Query: 880 TKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKRKNRDLLKSQKQIISDEIVKIDRL 939
+N+ WW+++ Q G+PG+SFI+RLK L + IK W+++ L K+ I E+ ID+
Sbjct: 999 KRNMGRWWENSIQAGYPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKEAIIREVDSIDKK 1058
Query: 940 ENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDENTTFFHKVCTARRR 999
E LT + +R +LK+DL ++S++E + W QR KK WL+EGDEN++FFH++C++R++
Sbjct: 1059 ELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQK 1118
Query: 1000 RCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPT-SEGWMVSNLNWCPISGSEASSL 1059
R FI E+ G T++ + I FS IY+ T S+ + NL+W PI+ SE S L
Sbjct: 1119 RSFIHEIQDEEGSIQNTNNSISTAFIKFFSRIYRSSTKSDPLFIENLDWNPIASSEWSHL 1178
Query: 1060 IQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSWIAITQLWKCSMTSIRKDFRPISLT 1067
PF E E+ + + K+PGPDGF + FF+ W
Sbjct: 1179 CAPFLEGEIKGVINSFDGKKTPGPDGFPISFFKSHW------------------------ 1238
BLAST of Lag0040826 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 1.6e-19
Identity = 91/405 (22.47%), Postives = 176/405 (43.46%), Query Frame = 0
Query: 706 DSTYQEGFPGYSFIRRLKQLVSNIKLWKRKNRDLLKSQKQIISDEIVKIDRLENLGCLTD 765
D+TYQ + + + R K + N +KRK +S+ ++ ++ ++++ E
Sbjct: 281 DTTYQNLWDAFKAVCRGKFIALN--AYKRKQE---RSKIDTLTSQLKELEKQEQTHSKAS 340
Query: 766 QMCQKRTSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDENTTFFHKV----------CTAR 825
+ Q+ T ++++L ++ Q KT K + + FF ++ +
Sbjct: 341 RR-QEITKIRAELKEIETQ----------KTLQKINESRSWFFERINKIDRPLARLIKKK 400
Query: 826 RRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPTSE----GWMVSNLNWCPISGS 885
R + I + + G ++++ + ++ ++Y + ++
Sbjct: 401 REKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQE 460
Query: 886 EASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFR------------------KSWI 945
E SL +P + E+ + ++ KSPGPDGFT EF++ K I
Sbjct: 461 EVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGI 520
Query: 946 AITQLWKCSM---------TSIRKDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQL 1005
++ S+ T+ +++FRPISL + +++ K LA R++ ++ I +Q+
Sbjct: 521 LPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQV 580
Query: 1006 AFVKGRQITDAILVANEAIDFWKCSRTRGFV-IKLDIEKAFDKICWNFVDKILAFKGYLI 1065
F+ G Q I + I ++ + V I +D EKAFDKI F+ K L G
Sbjct: 581 GFIPGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDG 640
Query: 1066 TWRKWIRACITSVSYSILLNGKPRGKIKAERGIRQGDPISPFILS 1069
+ K IRA + +I+LNG+ + G RQG P+SP + +
Sbjct: 641 MYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFN 669
BLAST of Lag0040826 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 1.0e-18
Identity = 97/432 (22.45%), Postives = 186/432 (43.06%), Query Frame = 0
Query: 667 MAITPVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWDS--TYQEGFPGYSFIRRLKQ 726
M+I P L + + F+N LL ++ F K+++ W +Q+ F + + +
Sbjct: 237 MSIAPSLPKAAY------WHFNNSLLEDEGFAKSVRDTWRGWRAFQDEFATLNQWWDVGK 296
Query: 727 LVSNIKLWKRKNRDLLKSQK----QIISDEIVKIDRLENLGCLTDQMCQ-KRTSLKSDLH 786
+ ++KL ++ + Q+ + ++ E++ ++ + L DQ Q + K L
Sbjct: 297 V--HLKLLCQEYTKSVSGQRNAEIEALNGEVLDLE--QRLSGSEDQALQCEYLERKEALR 356
Query: 787 QVSMQEIRMWKQRCKKTWLKEGDENTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQME 846
+ ++ R R + L + D + FF+ + + R I+ + + +G L +
Sbjct: 357 NMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIR 416
Query: 847 LEVINHFSNIYK-GPTSEGWMVSNLNWCP-ISGSEASSLIQPFSELEVFQNLKAMGHNKS 906
+ + N++ P S + P +S L P + E+ Q L+ M HNKS
Sbjct: 417 DRARSFYQNLFSPDPISPDACEELWDGLPVVSERRKERLETPITLDELSQALRLMPHNKS 476
Query: 907 PGPDGFTVEFFRKSW--------------------------IAITQLWKCSMTSIRKDFR 966
PG DG T+EFF+ W ++ L K + K++R
Sbjct: 477 PGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWR 536
Query: 967 PISLTTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRT 1026
P+SL + Y+++AK ++ RLKS L I +Q V GR I D + + + + F + +
Sbjct: 537 PVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGL 596
Query: 1027 RGFVIKLDIEKAFDKICWNFVDKILAFKGYLITWRKWIRACITSVSYSILLNGKPRGKIK 1064
+ LD EKAFD++ ++ L + + +++ S + +N +
Sbjct: 597 SLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLA 656
BLAST of Lag0040826 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 2.5e-17
Identity = 76/330 (23.03%), Postives = 145/330 (43.94%), Query Frame = 0
Query: 772 TSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDENTTFFHKVCTARRRRCFISEMISGNGVS 831
T ++++L+++ + I + K + ++ ++ + +R + IS + +GN
Sbjct: 340 TKIRAELNEIENKRIIQQINKSKSWFFEKINKIDKPLANLTRKKRVKSLISSIRNGND-E 399
Query: 832 LVTDSQMELEVINH-----FSNIYKGPTSEGWMVSNLNWCPISGSEASSLIQPFSELEVF 891
+ TD +++N +S+ Y+ + + +S E L +P S E+
Sbjct: 400 ITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIA 459
Query: 892 QNLKAMGHNKSPGPDGFTVEFFR------------------KSWIAITQLWKCSMTSI-- 951
++ + KSPGPDGFT EF++ K I ++ ++T I
Sbjct: 460 STIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPK 519
Query: 952 -------RKDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVA 1011
++++RPISL + +++ K L R++ ++ I +Q+ F+ G Q I +
Sbjct: 520 PGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKS 579
Query: 1012 NEAID-FWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYLITWRKWIRACITSVSY 1069
I K ++ +D EKAFD I F+ + L G T+ K I A + +
Sbjct: 580 INVIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTA 639
BLAST of Lag0040826 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 89.7 bits (221), Expect = 2.1e-16
Identity = 65/229 (28.38%), Postives = 107/229 (46.72%), Query Frame = 0
Query: 868 ISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEF---FRKSWIAI--------- 927
++ + L P S E+ + ++ KSPGPDGF+ EF F++ I I
Sbjct: 448 LNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIE 507
Query: 928 ------TQLWKCSMTSIRK---------DFRPISLTTVLYRLIAKTLAERLKSTLQGTIS 987
++ ++T I K +FRPISL + +++ K LA R++ ++ I
Sbjct: 508 VEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIH 567
Query: 988 ENQLAFVKGRQITDAILVANEAIDFW-KCSRTRGFVIKLDIEKAFDKICWNFVDKILAFK 1047
+Q+ F+ G Q I + I + K +I LD EKAFDKI F+ K+L
Sbjct: 568 PDQVGFIPGMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERS 627
Query: 1048 GYLITWRKWIRACITSVSYSILLNGKPRGKIKAERGIRQGDPISPFILS 1069
G + I+A + +I +NG+ I + G RQG P+SP++ +
Sbjct: 628 GIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFN 676
BLAST of Lag0040826 vs. ExPASy Swiss-Prot
Match:
Q03274 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 2.8e-08
Identity = 49/194 (25.26%), Postives = 91/194 (46.91%), Query Frame = 0
Query: 897 SPGPDGFTVEFFRKSWIA------------ITQLWKCSMTS-IRKD--------FRPISL 956
+PG DG TV+ ++ + + W T+ I KD +RPI++
Sbjct: 22 APGSDGLTVQAITRTRLPRNFVQLHLLRGHVPTPWTAMRTTLIPKDGDLENPSNWRPITI 81
Query: 957 TTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFV 1016
+ L RL+ + LA+RL++ ++ ++ A + G + +L + I + R V
Sbjct: 82 ASALQRLLHRILAKRLEAAVELHPAQKGYARIDGTLVNSLLL--DTYISSRREQRKTYNV 141
Query: 1017 IKLDIEKAFDKICWNFVDKILAFKGYLITWRKWIRACITSVSYSILLN-GKPRGKIKAER 1069
+ LD+ KAFD + + + + L G +I ++ + +I + G KI R
Sbjct: 142 VSLDVRKAFDTVSHSSICRALQRLGIDEGTSNYITGSLSDSTTTIRVGPGSQTRKICIRR 201
BLAST of Lag0040826 vs. ExPASy TrEMBL
Match:
A0A5A7US62 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003960 PE=4 SV=1)
HSP 1 Score: 675.6 bits (1742), Expect = 3.3e-190
Identity = 420/1192 (35.23%), Postives = 612/1192 (51.34%), Query Frame = 0
Query: 38 GNKNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSD 97
G K I+VP+G D GW +FLA++TF+ T R +P + SS SD
Sbjct: 75 GRKCSILVPEGPDSFGWKSFLALITFRSSAP-TKRIRSEIRKEP---VSTFSDSFSSDSD 134
Query: 98 SSQRSYADVLKNPSEVESGPSGGENDLSGIKGQFNKTGETEFSFEWN---KVVILSRRCF 157
SS++SYA VL + SE ++ + + G F+ N K VI++RRCF
Sbjct: 135 SSRKSYAKVLSDSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKTVIITRRCF 194
Query: 158 HDDWTRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNR---GWVTIGHFYVK 217
HDDW RI +R+ ++ SY PF ADKAIL+L + D A+LLC N+ GW T+G++ VK
Sbjct: 195 HDDWNRIMFSLRKQSEIAFSYKPFQADKAILFL-NPDHAKLLCSNKGANGWSTVGNYQVK 254
Query: 218 YEKWEPGKHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDL 277
+E W+ H +IPSYGGW++FRGIPLH WN TF +G ACGGF++V+K T + L
Sbjct: 255 FESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKL 314
Query: 278 IDVVIKIKENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAME 337
ID IK++ N+ GF+PA+I I D++GE + V TV P +A+W + RN +VHG+F AA E
Sbjct: 315 IDAKIKVRYNYIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADE 374
Query: 338 YDEYDVKSEPFTFRGEAAC-----------TVYELNAVADSLNASCLNNSNNVVRPSKRS 397
+D+++ +E +T+ G A +++ + + S + N+++
Sbjct: 375 FDQHNHLAETYTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYDPFD 434
Query: 398 LPAATISKDKGK-----------KSAQAPRRIVSVDLGYLSP------------------ 457
+ K+KGK ++ +RI + + +LSP
Sbjct: 435 QQLSDRRKEKGKAILIINDQDHGHYSKRSKRISNRKVSFLSPGGIQSNSSNTEINTKGKS 494
Query: 458 -----ISDP---------------AFSSPEDPPSSNQHSKDSSPSTIAQDSLKTLLQVDM 517
I+D + +DP S + K S T + S + L VDM
Sbjct: 495 LEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHKLSLKET-GEGSKQMNLSVDM 554
Query: 518 N--------MDINQRPGSDEI-NIGQEQNEKRNDLMYKKQLNEWLLE---NNFCLVPTKC 577
+ G D N + N K D K L + E N +
Sbjct: 555 GPISPLESMIQSENNHGLDTFNNQTPDGNSKSTDSAEAKNLTVSVKEGADQNKSASRSTA 614
Query: 578 LSEDVNVTVNNH---DVMGPDNIVILTETKISSISKKLIKSLWSS----ISINWSALD-- 637
+ + D + +VI + +S K + SS + ++ +D
Sbjct: 615 EGNSKDAKTGSELEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSYFPVIVSDQNMDIA 674
Query: 638 ---SIGKSGGILILWDELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPASRRNRKN 697
+G GGIL+LWD+ N + G +S+S+N +G WWL+ +YGP +R
Sbjct: 675 GHGPLGDKGGILVLWDDTNFKVNDIKVGNYSISLNILNTNG-NWWLTSVYGPYKYNDRTK 734
Query: 698 FWTELHDLGGLCNDCWLLGGDFNVFRWNHETSSPRPAKKSMRRFNSSLMIFRLLTRPSL- 757
W EL L LC WL+ GDFN+ RW ET++ K++M FN+ + + L+ P L
Sbjct: 735 LWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFISVNELIDPPPLN 794
Query: 758 -------MAITP------------------------------------VLENPEFRWGPC 817
+ + P +LE+P+ +WGPC
Sbjct: 795 NNFTWSNLRVNPTYSRLDRFLLSKGWENAFGLHTSRTLERNISDHFPILLESPQIKWGPC 854
Query: 818 PFRFDNYLLHEKDFTKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKRKNRDLLKSQ 877
PFR +N L +K+F KN WW+S+ Q GFPGY+FI+ L L IK W+ +L +
Sbjct: 855 PFRLNNSSLRDKEFQKNFINWWNSSKQAGFPGYAFIQSLNSLSKFIKEWQHNKVNLYDAN 914
Query: 878 KQIISDEIVKIDRLENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDE 937
K+ + EI ID+LE G ++ QKR SLKSDL + + ++W QR ++ W GDE
Sbjct: 915 KKALLKEIDIIDKLEFQGEMSTTHHQKRISLKSDLLSIENNQAQIWHQRARQRWNLLGDE 974
Query: 938 NTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPTSEGWMVSNL 997
N ++FH++CT +R+ I + G SL + + I+HF NIY + E ++ NL
Sbjct: 975 NNSYFHRICTINQRKNLIKSICDPAGTSLDSIDDISRTFISHFQNIYTKESYEEILIDNL 1034
Query: 998 NWCPISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSW----------- 1057
+W PIS S L +PF E E+ + + + K+PGPDG+T+ F++K W
Sbjct: 1035 SWNPISRLCQSELCKPFDESEIKSTIMSFSNEKAPGPDGYTMLFYKKHWPDLKDDLLNVF 1094
Query: 1058 ------------------IAITQLWKCSMTSIRKDFRPISLTTVLYRLIAKTLAERLKST 1067
I++ KCS S D+RPISLTT LY+++AK LA RLKS
Sbjct: 1095 KDFHKAGIVNNNVNNTFIALISKKEKCSKPS---DYRPISLTTSLYKIMAKALANRLKSA 1154
BLAST of Lag0040826 vs. ExPASy TrEMBL
Match:
A0A5D3CA17 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00050 PE=4 SV=1)
HSP 1 Score: 674.1 bits (1738), Expect = 9.7e-190
Identity = 419/1192 (35.15%), Postives = 611/1192 (51.26%), Query Frame = 0
Query: 38 GNKNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSD 97
G K I+VP+G D GW +FLA++TF+ T R +P + SS SD
Sbjct: 75 GRKCSILVPEGPDSFGWKSFLALITFRSSAP-TKRIRSEIRKEP---VSTFSDSFSSDSD 134
Query: 98 SSQRSYADVLKNPSEVESGPSGGENDLSGIKGQFNKTGETEFSFEWN---KVVILSRRCF 157
SS++SYA VL + SE ++ + + G F+ N K VI++RRCF
Sbjct: 135 SSRKSYAKVLSDSSEDDNKKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKTVIITRRCF 194
Query: 158 HDDWTRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNR---GWVTIGHFYVK 217
HDDW RI +R+ ++ SY PF ADKAIL+L + D A+LLC N+ GW T+G++ VK
Sbjct: 195 HDDWNRIMFSLRKQSEIAFSYKPFQADKAILFL-NPDHAKLLCSNKGANGWSTVGNYQVK 254
Query: 218 YEKWEPGKHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDL 277
+E W+ H +IPSYGGW++FRGIPLH WN TF +G ACGGF++V+K T + L
Sbjct: 255 FESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKETMQMDKL 314
Query: 278 IDVVIKIKENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAME 337
ID IK++ N+ GF+PA+I I D++GE + V TV P +A+W + RN +VHG+F AA E
Sbjct: 315 IDAKIKVRYNYIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSFRTKAADE 374
Query: 338 YDEYDVKSEPFTFRGEAAC-----------TVYELNAVADSLNASCLNNSNNVVRPSKRS 397
+D+++ +E +T+ G A +++ + + S + N+++
Sbjct: 375 FDQHNHLAETYTYNGFQAIPPEPTRTHGDYSIHNSDKHSISYHTQAKKNNSSESEYDPFD 434
Query: 398 LPAATISKDKGK-----------KSAQAPRRIVSVDLGYLSP------------------ 457
+ K+KGK ++ +RI + + +LSP
Sbjct: 435 QQLSDRRKEKGKAILIINDQDHGHYSKRSKRISNRKVSFLSPGGIQSNSSNTEINTKGKS 494
Query: 458 -----ISDP---------------AFSSPEDPPSSNQHSKDSSPSTIAQDSLKTLLQVDM 517
I+D + +DP S + K S T + S + L VDM
Sbjct: 495 LEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHKLSLKET-GEGSKQMNLSVDM 554
Query: 518 N--------MDINQRPGSDEI-NIGQEQNEKRNDLMYKKQLNEWLLE---NNFCLVPTKC 577
+ G D N + N K D K L + E N +
Sbjct: 555 GPISPLESMIQSENNHGLDTFNNQTPDGNSKSTDSAEAKNLTVSVKEGADQNKSASRSTA 614
Query: 578 LSEDVNVTVNNH---DVMGPDNIVILTETKISSISKKLIKSLWSS----ISINWSALD-- 637
+ + D + +VI + +S K + SS + ++ +D
Sbjct: 615 EGNSKDAKTGSELEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSYFPVIVSDQNMDIA 674
Query: 638 ---SIGKSGGILILWDELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPASRRNRKN 697
+G GGIL+LWD+ N + G +S+S+N +G WWL+ +YGP +R
Sbjct: 675 GHGPLGDKGGILVLWDDTNFKVNDIKVGNYSISLNILNTNG-NWWLTSVYGPYKYNDRTK 734
Query: 698 FWTELHDLGGLCNDCWLLGGDFNVFRWNHETSSPRPAKKSMRRFNSSLMIFRLLTRPSL- 757
W EL L LC WL+ GDFN+ RW ET++ K++M FN+ + + L+ P L
Sbjct: 735 LWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFISVNELIDPPPLN 794
Query: 758 -------MAITP------------------------------------VLENPEFRWGPC 817
+ + P +LE+P+ +WGPC
Sbjct: 795 NNFTWSNLRVNPTYSRLDRFLLSKGWENAFGLHTSRTLERNISDHFPILLESPQIKWGPC 854
Query: 818 PFRFDNYLLHEKDFTKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKRKNRDLLKSQ 877
PFR +N L +K+F KN WW+S+ Q GFPGY+FI+ L L IK W+ +L +
Sbjct: 855 PFRLNNSSLRDKEFQKNFINWWNSSKQAGFPGYAFIQSLNSLSKFIKEWQHNKVNLYDAN 914
Query: 878 KQIISDEIVKIDRLENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDE 937
K+ + EI ID+LE G ++ QKR SLKSDL + + ++W QR ++ W GDE
Sbjct: 915 KKALLKEIDIIDKLEFQGEMSTTHHQKRISLKSDLLSIENNQAQIWHQRARQRWNLLGDE 974
Query: 938 NTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPTSEGWMVSNL 997
N ++FH++CT +R+ I + G SL + + I+HF NIY + E ++ NL
Sbjct: 975 NNSYFHRICTINQRKNLIKSICDPAGTSLDSIDDISRTFISHFQNIYTKESYEEILIDNL 1034
Query: 998 NWCPISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSW----------- 1057
+W PIS S L +PF E E+ + + + K+PGPDG+T+ F++K W
Sbjct: 1035 SWNPISRLCQSELCKPFDESEIKSTIMSFSNEKAPGPDGYTMLFYKKHWPDLKDDLLNVF 1094
Query: 1058 ------------------IAITQLWKCSMTSIRKDFRPISLTTVLYRLIAKTLAERLKST 1067
I++ KCS S D+RPISLTT LY+++AK LA RLKS
Sbjct: 1095 KDFHKAGIVNNNVNNTFIALISKKEKCSKPS---DYRPISLTTSLYKIMAKALANRLKSA 1154
BLAST of Lag0040826 vs. ExPASy TrEMBL
Match:
A0A5A7TDG1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001050 PE=4 SV=1)
HSP 1 Score: 656.0 bits (1691), Expect = 2.7e-184
Identity = 411/1199 (34.28%), Postives = 614/1199 (51.21%), Query Frame = 0
Query: 40 KNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSDSS 99
K+CI+VP+G ++S W +FL+M+T K + + + PR P + R P D
Sbjct: 105 KSCILVPEGLEKSCWVSFLSMITPKVEVKAKTRPIFLPRSSP---EFRLSPP----IDYH 164
Query: 100 QRSYAD-VLKNPSEVESGPSGGENDLSGIKGQFNKTGETEFSFEWNKVVILSRRCFHDDW 159
+RSYA V + S + S S + N ++ F V+L RR FHDDW
Sbjct: 165 KRSYAKAVSEGRSSISSDSSDSYASSDSSQSSGNSPCDSPFPVLLENTVVLVRRFFHDDW 224
Query: 160 TRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNRGWVTIGHFYVKYEKWEPG 219
+I + +R+ + +Y+ FHA+K +++ S+ A LLC+N+GW T+G + V++EKW P
Sbjct: 225 QKILQNLRKQTEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPA 284
Query: 220 KHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDLIDVVIKI 279
H PKLIPSYGGW FRGIPLH WNM TF Q+G ACGG I+V++ T +LI+ +KI
Sbjct: 285 SHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKI 344
Query: 280 KENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAMEYDEYDVK 339
+ N+ GF+PA + I D +G + V+ V + KW + RN ++HGTF R AA +D+++
Sbjct: 345 RYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPD 404
Query: 340 SEPFTFRGEAACTVYELNAVADSLNASCLNN----SNNVVRPSKRSLPAATI-------- 399
SE F F G A + LN ++ S + + +++P+K + T+
Sbjct: 405 SEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDN 464
Query: 400 ---------------------SKDKGKKSAQAPRRIVSVDLGYL--------SPISDPAF 459
S DKGK+ P ++ S + Y SP + F
Sbjct: 465 SLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTF 524
Query: 460 SSPEDPPSSNQHSKDSSPSTIAQDSLKTLLQ-VDMNMDINQRPGSDEINIGQEQNEKRND 519
+P+ P++ HS + + S+K + + NQ G+ I Q +D
Sbjct: 525 FNPDSAPAN--HSPEKKKRVSRERSVKKKSSTIQPKLRANQGKGN---LITQPLQVVAHD 584
Query: 520 L-MYKKQLNEWL-LENNFCLVPTKCLSEDVN------VTVNNHDVMGPDNIVILTETKIS 579
L KK L+ + L N L P+K + + + + N +V+ + +T+ + S
Sbjct: 585 LDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKS 644
Query: 580 SISKKL-------------------------------------IKSLWSSISINWSA--- 639
+ S ++ +K +SI+ +
Sbjct: 645 NSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGA 704
Query: 640 -------LDSIGKS-GGILILWDELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPA 699
+G S GGILILWD + S + +G FSLS NF + WWL+G+YGP
Sbjct: 705 TTSTNALFSQLGSSAGGILILWDAQHHSLLSQEEGKFSLSANFSSFNN-SWWLTGLYGPV 764
Query: 700 SRRNRKNFWTELHDLGGLCNDCWLLGGDFNVFRWNHETSSPRPAKKSMRRFNSSLM---- 759
RR R N W +LH+L L + W++GGD NV R E+++ + S N +
Sbjct: 765 KRRERLNVWEDLHNLHHLNSSPWIIGGDLNVVRMREESTAVTFSSHSSNMLNDFISNNLL 824
Query: 760 ----------------------------------------IFRLLTRPSLMAITPVLEN- 819
I R L RP+ V E+
Sbjct: 825 IDPPLTNNRYTWSNLRNPPTFSRLDRFLYNSRWEILFNPHITRTLPRPTSDHFPLVCEDS 884
Query: 820 -PEFRWGPCPFRFDNYLLHEKDFTKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKR 879
RWGP PFR ++ L++ +F +N++ WW+ + Q G PG+ FI+RLK L + IK W++
Sbjct: 885 TSTLRWGPAPFRLNSIALNDPEFKRNMERWWELSVQNGHPGFFFIQRLKSLANLIKPWQK 944
Query: 880 KNRDLLKSQKQIISDEIVKIDRLENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCK 939
+ L S K+ I E+ ID+ E L+ + +R +LK++L+ +S++E + W QR K
Sbjct: 945 EKFQSLTSAKENIIREVDSIDKNELDTPLSLEESNRRLALKAELNDLSLKESQFWFQRAK 1004
Query: 940 KTWLKEGDENTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPT 999
K WLKEGDEN+ FFH++C++R++R I E+ G T++ + L +NHFS IY+ T
Sbjct: 1005 KLWLKEGDENSAFFHRICSSRQKRNLIHEIQDEEGSIQNTNNNISLAFVNHFSRIYRCST 1064
Query: 1000 -SEGWMVSNLNWCPISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSW- 1059
+ + NL W PI S+ S L PFSE E+ +K+ NK+PGPDGF + FF+ W
Sbjct: 1065 KKDPLFIENLEWNPIDYSDWSLLCAPFSEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWH 1124
Query: 1060 -------------------------IAITQLWKCSMTSIRKDFRPISLTTVLYRLIAKTL 1067
I + K S KDFRPISLTT +Y+ IAKTL
Sbjct: 1125 LLKEDILDIFKDFFEKGVINKNMNNTYIALIEKKKDYSHPKDFRPISLTTSIYKTIAKTL 1184
BLAST of Lag0040826 vs. ExPASy TrEMBL
Match:
A0A5D3BL61 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001020 PE=4 SV=1)
HSP 1 Score: 656.0 bits (1691), Expect = 2.7e-184
Identity = 411/1199 (34.28%), Postives = 614/1199 (51.21%), Query Frame = 0
Query: 40 KNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSDSS 99
K+CI+VP+G ++S W +FL+M+T K + + + PR P + R P D
Sbjct: 105 KSCILVPEGLEKSCWVSFLSMITPKVEVKAKTRPIFLPRSSP---EFRLSPP----IDYH 164
Query: 100 QRSYAD-VLKNPSEVESGPSGGENDLSGIKGQFNKTGETEFSFEWNKVVILSRRCFHDDW 159
+RSYA V + S + S S + N ++ F V+L RR FHDDW
Sbjct: 165 KRSYAKAVSEGRSSISSDSSDSYASSDSSQSSGNSPCDSPFPVLLENTVVLVRRFFHDDW 224
Query: 160 TRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNRGWVTIGHFYVKYEKWEPG 219
+I + +R+ + +Y+ FHA+K +++ S+ A LLC+N+GW T+G + V++EKW P
Sbjct: 225 QKILQNLRKQTEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPA 284
Query: 220 KHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDLIDVVIKI 279
H PKLIPSYGGW FRGIPLH WNM TF Q+G ACGG I+V++ T +LI+ +KI
Sbjct: 285 SHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKI 344
Query: 280 KENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAMEYDEYDVK 339
+ N+ GF+PA + I D +G + V+ V + KW + RN ++HGTF R AA +D+++
Sbjct: 345 RYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPD 404
Query: 340 SEPFTFRGEAACTVYELNAVADSLNASCLNN----SNNVVRPSKRSLPAATI-------- 399
SE F F G A + LN ++ S + + +++P+K + T+
Sbjct: 405 SEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDN 464
Query: 400 ---------------------SKDKGKKSAQAPRRIVSVDLGYL--------SPISDPAF 459
S DKGK+ P ++ S + Y SP + F
Sbjct: 465 SLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTF 524
Query: 460 SSPEDPPSSNQHSKDSSPSTIAQDSLKTLLQ-VDMNMDINQRPGSDEINIGQEQNEKRND 519
+P+ P++ HS + + S+K + + NQ G+ I Q +D
Sbjct: 525 FNPDSAPAN--HSPEKKKRVSRERSVKKKSSTIQPKLRANQGKGN---LITQPLQVVAHD 584
Query: 520 L-MYKKQLNEWL-LENNFCLVPTKCLSEDVN------VTVNNHDVMGPDNIVILTETKIS 579
L KK L+ + L N L P+K + + + + N +V+ + +T+ + S
Sbjct: 585 LDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKS 644
Query: 580 SISKKL-------------------------------------IKSLWSSISINWSA--- 639
+ S ++ +K +SI+ +
Sbjct: 645 NSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGA 704
Query: 640 -------LDSIGKS-GGILILWDELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPA 699
+G S GGILILWD + S + +G FSLS NF + WWL+G+YGP
Sbjct: 705 TTSTNALFSQLGSSAGGILILWDAQHHSLLSQEEGKFSLSANFSSFNN-SWWLTGLYGPV 764
Query: 700 SRRNRKNFWTELHDLGGLCNDCWLLGGDFNVFRWNHETSSPRPAKKSMRRFNSSLM---- 759
RR R N W +LH+L L + W++GGD NV R E+++ + S N +
Sbjct: 765 KRRERLNVWEDLHNLHHLNSSPWIIGGDLNVVRMREESTAVTFSSHSSNMLNDFISNNLL 824
Query: 760 ----------------------------------------IFRLLTRPSLMAITPVLEN- 819
I R L RP+ V E+
Sbjct: 825 IDPPLTNNRYTWSNLRNPPTFSRLDRFLYNSRWEILFNPHITRTLPRPTSDHFPLVCEDS 884
Query: 820 -PEFRWGPCPFRFDNYLLHEKDFTKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKR 879
RWGP PFR ++ L++ +F +N++ WW+ + Q G PG+ FI+RLK L + IK W++
Sbjct: 885 TSTLRWGPAPFRLNSIALNDPEFKRNMERWWELSVQNGHPGFFFIQRLKSLANLIKPWQK 944
Query: 880 KNRDLLKSQKQIISDEIVKIDRLENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCK 939
+ L S K+ I E+ ID+ E L+ + +R +LK++L+ +S++E + W QR K
Sbjct: 945 EKFQSLTSAKENIIREVDSIDKNELDTPLSLEESNRRLALKAELNDLSLKESQFWFQRAK 1004
Query: 940 KTWLKEGDENTTFFHKVCTARRRRCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPT 999
K WLKEGDEN+ FFH++C++R++R I E+ G T++ + L +NHFS IY+ T
Sbjct: 1005 KLWLKEGDENSAFFHRICSSRQKRNLIHEIQDEEGSIQNTNNNISLAFVNHFSRIYRCST 1064
Query: 1000 -SEGWMVSNLNWCPISGSEASSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSW- 1059
+ + NL W PI S+ S L PFSE E+ +K+ NK+PGPDGF + FF+ W
Sbjct: 1065 KKDPLFIENLEWNPIDYSDWSLLCAPFSEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWH 1124
Query: 1060 -------------------------IAITQLWKCSMTSIRKDFRPISLTTVLYRLIAKTL 1067
I + K S KDFRPISLTT +Y+ IAKTL
Sbjct: 1125 LLKEDILDIFKDFFEKGVINKNMNNTYIALIEKKKDYSHPKDFRPISLTTSIYKTIAKTL 1184
BLAST of Lag0040826 vs. ExPASy TrEMBL
Match:
A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)
HSP 1 Score: 654.4 bits (1687), Expect = 7.9e-184
Identity = 410/1210 (33.88%), Postives = 603/1210 (49.83%), Query Frame = 0
Query: 40 KNCIMVPDGYDRSGWNTFLAMLTFKEKKERTVNQMGPPRDQPREHDNRQKSPDSSSSDSS 99
K+CI+VP+G D+SGW +FL+M+T K + + PR P D R P D
Sbjct: 159 KSCILVPEGPDKSGWVSFLSMITPKVEVKAKTRPTFLPRTSP---DCRLSPP----IDYH 218
Query: 100 QRSYADVLKNPSEVESGPSGGENDLS-GIKGQFNKTGETEFSFEWNKVVILSRRCFHDDW 159
+RSYA + + S D S N ++ S V++ RR FHDDW
Sbjct: 219 KRSYAKAVTEGRPFATSDSSDSYDSSDSSHSSSNSFCDSPSSDLLENTVVIVRRFFHDDW 278
Query: 160 TRIFKKIRELNDNVLSYSPFHADKAILYLRSSDQAQLLCKNRGWVTIGHFYVKYEKWEPG 219
+I + +R+ + +Y+ FHA+KA+++ S+ A LLC+N+GW T+G + V++EKW P
Sbjct: 279 HKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGWSTVGKYSVRFEKWSPV 338
Query: 220 KHVVPKLIPSYGGWVKFRGIPLHAWNMKTFTQLGDACGGFIEVSKNTWRKLDLIDVVIKI 279
H PKLIPSYGGW FRGIPLH WNM TF Q+G AC G I+V++ T +LI+ IK+
Sbjct: 339 YHATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKV 398
Query: 280 KENFCGFIPAAICIRDDKGEAYTVRTVAPEKAKWHICRNPKVHGTFMRGAAMEYDEYDVK 339
+ N+ GF+PA + I D++G + V+ V + KW I RN ++HGTF R AA +D+++ +
Sbjct: 399 RYNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKWLIERNVRLHGTFKRQAAASFDDFNPE 458
Query: 340 SEPFTFRGEAACTVYELNAVADS----------------------------LNASCLNNS 399
SE F F G A + L+ +D LN +N+S
Sbjct: 459 SEQFFFEGSEAISPDFLSTSSDGRKSSTPDQPSALKSVIIKPDRNATLPSFLNEELVNDS 518
Query: 400 NNVVRPSKRSLPAAT-ISK----DKGKKSAQ---APRRIVSVD-----LGYLSPISDPAF 459
N +K L + IS DKGK+ P +++D + + SP +
Sbjct: 519 NLHATANKSKLEILSGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNI 578
Query: 460 SSPEDPPSSNQHS----------------KDSSPST--------------------IAQD 519
+P+ P+++ S K S ST +A D
Sbjct: 579 FNPDSAPANHSPSLNSPEKKQKVSRERSIKKKSSSTQPNSKANQNKGVFITQPIQIVAHD 638
Query: 520 ------------SLKTLLQVDMNMDINQRPGSDEINI----------------------- 579
L L +D N + SD +
Sbjct: 639 RDAAKKGLSLTVDLGDLPALDPNKSLEDHHNSDNAEVVDITNTEVVPETPEMKMPVNENS 698
Query: 580 ----------------------GQEQNEKRNDL-MYKKQLNEWLLENNFCLVPTKCLSED 639
+E+ EK D +KKQL WL +N L ++
Sbjct: 699 NSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKKNGLKLSTD---TDS 758
Query: 640 VNVTVNNHDVMGPDNIVILTETKISSISKKLIKSLWSSISINWSALDSIGKSGGILILWD 699
T + + ++ N + + +K++IKSLW S SINW A ++ G SGGILILWD
Sbjct: 759 SGATTSTNVLLNQMN------SGLKITNKRIIKSLWPSNSINWIAKNASGSSGGILILWD 818
Query: 700 ELNVSAIETLKGIFSLSINFRLADGFCWWLSGIYGPASRRNRKNFWTELHDLGGLCNDCW 759
N S + +G+FSLS NF L + WWL+G+YGP RR R +FW ELH+L L + W
Sbjct: 819 AQNHSLLSQEEGLFSLSANFLLNNNSSWWLTGLYGPVKRRERIHFWAELHNLQHLNSFPW 878
Query: 760 LLGGDFNVFRWNHETSSPRPAKKSMRRFN----SSLMIFRLLTR-----------PSLMA 819
+LGGD NV R E++S + + R N ++L+I LT P+
Sbjct: 879 ILGGDLNVIRMREESTSVLSSSHNSRMLNNFISNNLLIDPPLTNNRFTWSNLRNPPTFSR 938
Query: 820 ITPVL-------------------------------ENPEFRWGPCPFRFDNYLLHEKDF 879
I L NP+ WGP PFR ++ L + +F
Sbjct: 939 IDRFLYNSSWENLFSPHTTRTLPRSTSDHFPLVCEDSNPKLSWGPIPFRLNSITLSDPEF 998
Query: 880 TKNIKFWWDSTYQEGFPGYSFIRRLKQLVSNIKLWKRKNRDLLKSQKQIISDEIVKIDRL 939
+N+ WW+++ Q G+PG+SFI+RLK L + IK W+++ L K+ I E+ ID+
Sbjct: 999 KRNMGRWWENSIQAGYPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKEAIIREVDSIDKK 1058
Query: 940 ENLGCLTDQMCQKRTSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDENTTFFHKVCTARRR 999
E LT + +R +LK+DL ++S++E + W QR KK WL+EGDEN++FFH++C++R++
Sbjct: 1059 ELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQK 1118
Query: 1000 RCFISEMISGNGVSLVTDSQMELEVINHFSNIYKGPT-SEGWMVSNLNWCPISGSEASSL 1059
R FI E+ G T++ + I FS IY+ T S+ + NL+W PI+ SE S L
Sbjct: 1119 RSFIHEIQDEEGSIQNTNNSISTAFIKFFSRIYRSSTKSDPLFIENLDWNPIASSEWSHL 1178
Query: 1060 IQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFRKSWIAITQLWKCSMTSIRKDFRPISLT 1067
PF E E+ + + K+PGPDGF + FF+ W
Sbjct: 1179 CAPFLEGEIKGVINSFDGKKTPGPDGFPISFFKSHW------------------------ 1238
BLAST of Lag0040826 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 77.8 bits (190), Expect = 5.9e-14
Identity = 75/326 (23.01%), Postives = 139/326 (42.64%), Query Frame = 0
Query: 651 FNSSLMIFRLLTRPSLMAITPVLENPEFRWGPCPFRFDNYLLHEKDFTKNIKFWWDSTYQ 710
F S++ +F L +LEN R C FR+ ++L F ++ W+
Sbjct: 299 FPSAIAVFELSGVSDHSPCIIILENLPKRSKKC-FRYFSFLSTHPTFLVSLTVAWEEQIP 358
Query: 711 EGFPGYSFIRRLKQLVSNIKLWKRKNRDLL--KSQKQIISDEIVKIDRLENLGCLTDQMC 770
G +S LK KL R+ + K+++ + S E ++ L N +D +
Sbjct: 359 VGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTN---PSDSLF 418
Query: 771 QKRTSLKSDLHQVSMQEIRMWKQRCKKTWLKEGDENTTFFHKVCTARRRRCFISEMISGN 830
+ + + + ++Q+ + WL++GD NT FFHKV A + + I + +
Sbjct: 419 RVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDD 478
Query: 831 GVSLVTDSQMELEVINHFSNIYKGPT-----SEGWMVSNLNWCPISGSEASSLIQPFSEL 890
V + +Q++ ++ +++++ + + +++ + + AS L S+
Sbjct: 479 DVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDK 538
Query: 891 EVFQNLKAMGHNKSPGPDGFTVEFFRKSWI--------------------------AITQ 944
E+ + AM NK+PGPD FT EFF +SW AIT
Sbjct: 539 EITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITL 598
BLAST of Lag0040826 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 52.0 bits (123), Expect = 3.5e-06
Identity = 28/83 (33.73%), Postives = 46/83 (55.42%), Query Frame = 0
Query: 947 LAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRG----FVIKLDIEK 1006
+ ERLK + I Q +F+ GR TD I+ EA+ + R +G ++KLD+EK
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMR--RKKGVKGWMLLKLDLEK 60
Query: 1007 AFDKICWNFVDKILAFKGYLITW 1026
A+D+I W++++ L G+ W
Sbjct: 61 AYDRIRWDYLEDTLISAGFPEVW 81
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0057507.1 | 6.9e-190 | 35.23 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYK08190.1 | 2.0e-189 | 35.15 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0039309.1 | 5.6e-184 | 34.28 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYK00493.1 | 5.6e-184 | 34.28 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYJ99315.1 | 1.6e-183 | 33.88 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
O00370 | 1.6e-19 | 22.47 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P14381 | 1.0e-18 | 22.45 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
P08548 | 2.5e-17 | 23.03 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
P11369 | 2.1e-16 | 28.38 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
Q03274 | 2.8e-08 | 25.26 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7US62 | 3.3e-190 | 35.23 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3CA17 | 9.7e-190 | 35.15 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TDG1 | 2.7e-184 | 34.28 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BL61 | 2.7e-184 | 34.28 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BLV7 | 7.9e-184 | 33.88 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 5.9e-14 | 23.01 | DNAse I-like superfamily protein | [more] |
AT4G20520.1 | 3.5e-06 | 33.73 | RNA binding;RNA-directed DNA polymerases | [more] |