Lag0040790 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040790
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CDT1-like protein b
Location	chr13: 8305562 .. 8313555 (+)
RNA-Seq Expression	Lag0040790
Synteny	Lag0040790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCTTCAGAGAACCATGCGCTTTCGATTAAGAAATTGCCTGAGAAGTAAGTTTTTTTTTTTGTTTCTTGATCTTTAATTTGCCTTATCGGTGACTGTCTGTCTTTACATATAGTTTGAATATTTGGTGAATGAATGAGTATTGTTATTTTGGTGTTTGCAGATTTGAGATTCTAAGTAGGTTTTTTGATAGCTTGGATTCTGCAATGCGGTTGTTACGATTGAAACGTTTACCATCGAAATTTTCTAATGTATGCCCCAAGGTTGAACTTCTCACTGATAGGTAATTATTCTGCCTTCTACATTACCGGTTGCGATGATCAATTTATGTGTTGAAACTGCAGATAAACATAGTGTTTTGAAGAATACCTCGAATTATTTATCTGATTGAGTGCATAAGTTACACTGAAGAAGTTTTTGAGTTCCGTTATTTGTTTACTTGTTTAAAAAACTGCTTGTTTGTAATGTTAATTAATTAAGTACTACAAAGAATATGGACCTACTTGTGTTGTGTTTTCTAATTCAGAAATCGATGGCTATGACTGCAGGAGGTTTTCACATGGTCGTTTGGCCCAACTGAAGTTTATTTTACCTGAAGCAATAGAGCTTAGGAAGGTCCTTGTCTTTGATGAGCAAACCAGTTGTTTGAAGCCAGATCTTCACATATCTTTCAATTTTGGTGTCCTAGATAATCAAGATGACCTTGAATCAGGAAACCAGAATATGCAGTTGAGGAAGTTGTTTAGGGAACGGCTTTCAGAATTCACGAGTTCCCATCCAGAGGTATGCTACATTTTCCTTCTGTGAATTGTTGATATAGTATTTATTCGCATTTGTGGTCATGAATCCTAGAAATGTTGGTTCTCTCTATATAGACACTGGTCTCAAATGTGAAAGCTTGAGTTCCCTTAATGTTATTGCTAGTACTTGTTCTGTTTTAAAACAAAATGCATAGATGCTTTCTGGTTGTTGCTTTTCACAAATTGTATAGTCTAGGAATAAAGTTCGTGGTGATACCAATGAGTTGATAGCTATCATTTGTATCATTGCCATTCAAGATATCCTGATTCTTCTCATTCAATTCGGAAGTCAATCTTCTCTTGTATACTGCGCTTTCAAAACTTTTTATGATCTAAGACAAGATTCCTATATTCAGATTGATGATGTTCCAAAGGGTTTGCTGCCGAAGCCATTCAATTTCCCAAGCCAAGATCATTTTCCAGAAACCAACTCTTCATCTTTCGAGCAACCGGCAGTGTCCTTTAACCATCATTCAGAAGAAAGTCAAGGTTTCCGCATAATTAAATCCATGGTGCCGAGTAAACGGAAGGAATTCATAGGGACATCTCATTTTTCACAAACTTTTAGCCGGCGTTTCTCCAGAAAAGTTACTAGAGATGTGGAGAAAACTGAGGAAGCCACAGAGCCTTGTGAACAAAGTTGGTCTCATTCTGATGCTGAGACAGAATTTTGTGAGCTTTCCAGTTCCTCCCCAGTTAAAGTACCTTCCAACTCAACCTGCCGTTCAGATTGTTTGGTAATTTCCACTCCTGCAAAACTTGTTTCAACCCCAGTTCGGCTGATGGCTTCCACGCCTGCAATTCCTCCACCAAAAAGAAGTTCCATGAGTTCTGATGATGATGATGATGATTCTTGCTCAGCAAACACGTTGGTGAGGCGTCCACCCCGTTCTAGATCACTTTTATTTGAAAATAAGAATGGGGTTTTTAAGAGTAGTAGATAATTTGTATACAAAAGATTAGATGAAAGAGGCTGTTCTAAAAATTATTTAGAAAAATGGTGTGGTCGACAGCTGTTTGTTTGTTTGTTTGTTTTTAGATTTTTTTTAATAGGTATAATTAAATTTGTTTATTTACAATATACCATTTGTTTTTATATATTTTTTTTCTCTTCTTTTATAAAACTATTTTTAGGTTATTGTTTTTAGATTTTTTTTTATCATTTAAAATATACATACATATATTGAAAGTTTATCTATTATTTAAAATTTAAGAATAGTAAATAATTTTTATAAAAAAAAACTCAATGGTAAAGAGTTTTGACAAGTATATTGGTTGAACAATAATTCGGATAACGTTTTAAAACTTTTTTGTAAGAGTAGAGACCACATGAAAATTTTAATAGTACAAGGATAAACTTGAATTAATACCTAAGTATATAGATAAAATTTATAAATTAATTTTATGTTATACAAAAATTTTAGTTGAAATTTAGGTTCACCCATAATATTATGAAATGATAAAATATTTATTATATATATTTTTAACTAACCACTATTAATAGGAGATTGAACAAGACTAATTATATTCATACTTTTAAAAATATCTTCCTCTAAATTTGAATGAGTTAATCTTTGATACTAAATTTTCAATTTTGTTTTTTTTTTTTTTTAAAAAAATCAATTTTGTTGCATTGAACCCTAAACGTGAAATAATGGTAAAATTAACCCATGGAACCATGTAATCAAAATTTGTTATTTTAATAAAATAAAAATAAAATTTCTATCTATACCTATAAATTAAGAATTAAATGAGTTACATGCTCCGGCAAAGAAAGTTGATCTTAAAAATGATAAATTTGTTACTTTTATTTTTACGAAATTGTAACAAATAGTACTACATTATTATTTATGAAAGTTATAATTAAATAATTTGGTAATAGGAAAAATAAATCACTATTGAAATACAATTTTCAAAAATCATTACTTAAAAACACAACTCTTTAAAAGACTATTTTATGAAAAAAAAAAAATGTATTCATTTGATTGATATCTATAAAGAATTAAAATTAATTTGAAATAACCATTGGAAAAGAATTAAAAAAAAAAAAAAAAAACCAGGATCTTGTCGTCCGGTCGTCCCGTTAAAATTAGAACGAGTCCAATCGAACTAGTTCGACATGTCGTTTCATCACAAGTGAATCAAGAGAGAGGGAAACCCTAGCACTTGAATTTAGAGCCCAAAACTCTCCTATTTAACCTCAGTTTCGCCGCTTCCTCATACTCATCCCTTCCATTTCGAAGCACCAAAAATTCATCGAAAATCTTTCAATCTTCATCTCTTCTTCCCCGCTTCTGATCGCCATTTCCTTGAATTCCTTGCCCTAATCGGCCAAGATTCGAGTTCTTCACTTCTCTCTTCTTTTCTCTCAGGCGTGGGCTATGATTAGAAAGAGAGAGGCTCGAGTGGGATTCGAATCGAAAACCCCGTTCGACTTTTCCGAGAATACCGATCGATGGAGGAGAGGATTGATTCAAGGTGCCGCCGTCTTCTAACGATGGCTTTGGTATCTTCTGAACTTTCTTCTGTCTTCTTTCGCTTCCGTTTTCTTGCGATTTTTTGAATTAGGGTTTTCTCTCACAGTGACGGGTTCTTTAAATTATCTATACACTTGATATGAGCCCTGAGGCCTAAGCGTTCTCTGCTTGTTATATTTCTGATTGATGCTTTAGATTTCTTGGCATTCGTTGTGTTTTTGTGAGGAAACGAGCTTTTCTTAGTGTGTTTTCTCATCGAACAATGGATGCTATAAAGAAAGTCCGATCGATCTCTCTCTTAATTTTCTCGGGAAAGTGAAATTTTCCTGGGAAAGAGGAGTTTGGGCGATCGGGCAGCGGCCAGACAACCGTAGGGATGGTATCCACAGATGATGGGCTTCATTTATCCCATTTTGTCTACTGATTCCATCTCATATTTCATCAACCTTTTTCTTTTTCTTTGATTTTTTCATGTTTGGTTTTAATACTAATTTGTTCTCTCAACTTTCAATATGCATATATTAGAAGGATCAAAGTGGTCATGTTTTTTTTTTTTTTTTTTAAATAAGTTGAGTGATTAAAGTAATGAAATATTTAGAGATTAAAATGACACATACGAAAATTTTGGGGACCAAAATTGCAGAATTGAATGATCTTTAAAGTTTTGAAGGACTAAAATTTATGAGATTTCTGCAGTTTTGATTGAATTGATTTGGTGAACCCATTTTTGAAGGGTTTCGACATTGTTGTGGAGGCTCGAATAAGATTTGGGATAAATTGGAAACTGATAAATTTATTAAAATCGTTTCAATAATCAAGCACTCACTCGACCTATTTGAAAGTTACAAATCCCTATTGGGGTCCTCCTAGTTTTCCACTAAAGAAAAATGTAAAATAGGAAAATGTGAATGGTGACAATGGAGTCTCCCCTAGACCTACTGTAGATACCCCGCTGAATGGAGATGGCTAGTGAAAGATACGATATTCATATTGAGACATGGTATTAGTGTCAGGCTGAGCGTATGCCTCGATATCAGGCATTCCTATAGGTTTAAAAAGAAATGATTTATTACCTTTTATGTCGAATAATGTTCCAAATCGAGAAAAAAAAATGTTGAAAAGTGTTTTATGTCTGAATAATAATAATAATAATAATAATGAGATTAAAGTCTCTAAAAAATTAAAAATAAAATAAACTAAGAACTTGTACTGTGATTTCAGTCATTGCATTGACCATCGGCAGCACAAAGAAGCCAGAAACTCAGATAACAATGGCTGATTTTCTATCAAATTCAACAATTGTATCCTTAAAATAAATCGTCAAAATAATAATTTCTCAAGTTGAGGTATATATATATTAAATTAAAGACGTTTAAATTGATAATTGGCTATATATATATTTTGAGTTTAACAATATTTGGGGTGAGGAATTTGAATTTTTGACCTTTTAATCAAGGATATATGTCAATTATCATGGATATGTTCACTTTAACAAGAACAAATTTGTTGTTTTTTTTTTTTTTTAATTCAATGCTTCCATAATTGTTTTCATTTTTTGAGAAAAGTATAATAATTGAAGTTAAAAAATGATGCAAGGATGTGAACATGTAATATTATTTTACAAATGCACGAAATTTAAGTGAAAAACTGAATGATTGGAAAAGATGAATGCTTTTGGCTAAAGTTTAGTGTGGTGAAAATGAAAATGAGTGGAATTGAGCTTTAGACCTTTTGTGAAAGTTTAGAATTTTAATTAAGTTACCATTATTATTTTTTTTTTGAAATAAAGTTATCATTATTAATGGTGTGATTTTAAGTCATACAACTTGTATAAATTGATTTTTATTCTTAAATTTAATAAACAAATTATCTCTTGTGAAGCATAAATTTGGGTTAAGTGACACTTTGGTATCTAAGTTTTCAAACTCAACAAAAATACTTCGAGACAAAGAGCACTTTGGTTCCTGCCGTCTAAAATTTAACGGTGGCACTATTATTTTAATAAAAAAATGTTTTTTTTTAAATTTTTTTAAAATAAAATTTAATAAAAATATTAATTTTTAATTCTTTTTTATTTCTTTTTTCTTTTTCCTTCATCTTCAACCCTTTCATCATCACCCTTTTTTTTTTTTTTGTTCCTTCTTCCCTTCTTTCCTATTCTTTCACCGTAAAAAAAAAAAAAAAAAGAAGAAAGATACCGTTGTTTGCCCATATCTGCGAAAGTCCAGATATTGTGAAGGTTCCAGCCGCAGCTCACGAAGACCCGCCAGTTCGTTGGCGATTGTGAAGACTTGCTTGCTGTCGCTCGCAAAGACCCGCTCGCCGTCGCTCGTGATGACCCGCCCACTCGCCGTCGCTCACGAAGACCCGCTCGTCGTCGCTCGCGAAGATCTTTCTCAGACCTGCTCGGAACTATCGTGCTCACGAAGACTTGCTCGCCATTGCTCGAAAAGATCTTGCTTGGATCTGCTCGGAAGTATCGTGCTCAGACCCGCCAGCTTGCTCTTCGTTCCGCTCGGAAGATTTGCTCAGAACTCACAACCTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAGTGAAAGAATAGGAAAGAAAAAAAAAGAGAAGAGGGAGAAGAAGAAAAGAGAGGAAAAAAAAAGATTGAAAAAATAAGGTTGTCGCCGATGACGGTCGGCCGCCGGCGAGCGTCGGTTGTCGGTGGACAGTCGTCGCCGGCTGGTTGATGGGGTGAGGATAGTTGAAAAAGAAGAAGGTTGGTGATGATGAAGGGGTTGAAGATGAAGGAAAAAGAAAAAAGAATTAAAAAATTAAAAAAAAAAACAAATTTTTATTAAAATAATAATGCCACGTCAGCAATCGTTAAAATTTAATCTTTATCTCAAACCTCAGAAAACTCAGGGACCAAAGTGTCACTCAACCCAAACCTCAGGGACCAAAAATATATTTTTCCCAAAGTTTTATTAGTGTAAATGACAATACTTAGTTGCATACTGATCTTTCTATATACCACCATTAAAATCTTGACAGAGTTAACTTATTATACATCTCGTTGACTAAGTTGACTTACCAATTCACTTTGTATAACTAGCCGTTGTTTCTGTTAGCAAATTAAATAATTGATGGTCAGGGGATTTAAATAACGAGTTCATTCTATTAATCTCCTTGATTAAAATTTTTACTTTGTCTCTCTTATTTGAACATTTGACATAGAAATTTGGTGGAATCATTATAATTTCTTTGCATTTAATAAAATTCTTTCTACTCTTTCTTAGGCTTCGTGGAATTGCAGTAGCTTTTAAAATAATTGTTGGTAACTTTGTTTTTAGAAAAATCAGCTATAAAATCAGCTATGAAATTGAGTAAATAATGTTTGGTAAATTTCAATTTTAAATTAGAAAAAAACTAGTTCAGTGTTTGATAAATTAATACTAAATTGCTAAGATTTAATTATAATTTACAAGAATCATAGTAGGCTTATTATTTCAAATATTTTTTTTATTAATACTTAATTTATAATTTATTATAAGATAATTATTTAAAAGTTTGTATGATTTAAATTGCATCTAATTATGTTTAATTAATCTAAAATATTTGATAAAAATGCAAGAAAAATAATTATTATAAAAATTGAATCAATCAAAATTTTATTTATACGAAAGAGAGCATATGTAAAAATATATATAAGAATGATAAATTTGAAATTTAAAAACAGTTAGAAAATGTGATAGATTTTTAGTAAAGCTAAATCTAAAAGCTGGTATTTGAGAGCTTTTGCACGGTAGAGTAAACTGAGGAGTGATTCTCGATAGATTAATTAATAATTTATTTTACCAAACAGTCTAAGCGGTTAAGATTCTCTCACAATCGCTTTTTAAGTTGACAAACGCAACCCCAAATGGGGCCTTAATCTTTGATTTATTGTAAGCTTATGTTATCGGTAAGCTTTTGTGCGTAAATCACCCCAAGGTGATATTAGAGCTTTGAAGAAGAGGGATTTTCGTTTGAACCTGACTTTTTTTCCTCTAGAAATTAGTTTTTTGATCGATCTCCTCAGAAATCCTTATCAATTGAAAGTGAATTAGCTAAGAGCTCATATATTGCAATTCTTTGATTAGCAATGGAAGCCAATGTCAGCAAGATTTGAATTGGAGCCATTTGACGGCAACGACTGAGCTTAAAGAGAGAACATGAAGGAACAAGAAGATCCAAGTAATTGTTGAAATCACCTATAATACACTAATCTTATATCTAGTTGGTAACGTTTTGAGTGTTACTGTATAGTCTACTGTGGTGATATTTACTTCTTGTACTTTGTTTACTGTTTCTGTCATTATATTGACATCTCAGTAGGTAGCAGTGGTTGACCCACTCTTCTCTTGTCTTTTCATTTATTCATTTCCCCTTGTGTATATATGAAGTGAGTTTGAGCTCTTAGAATGCATCAATACAGAAACCATTCTTCCTCTGCCTCTCGGTCTTATCTCTTTAAGCTACTGTCTTCAATTGCTTTTGTAATTTGGTATCAGAGCGCTCAATGGCTAACACCAACCCAATTATCAAGAAGTCTGGACCTGTGGAGAAAGACCCTACTGCCTTTGAGGTGAAATATGGAAAAACTCCAATGGGCAATCCATCTTGGACCTCAACCAAGCTACTTCAATCAAGCTTGACAGAAACAACTTTCTGTTGTGGCAAAACATAG

mRNA sequence

ATGGACGCTTCAGAGAACCATGCGCTTTCGATTAAGAAATTGCCTGAGAAATTTGAGATTCTAAGTAGGTTTTTTGATAGCTTGGATTCTGCAATGCGGTTGTTACGATTGAAACGTTTACCATCGAAATTTTCTAATGTATGCCCCAAGGTTGAACTTCTCACTGATAGGAGGTTTTCACATGGTCGTTTGGCCCAACTGAAGTTTATTTTACCTGAAGCAATAGAGCTTAGGAAGGTCCTTGTCTTTGATGAGCAAACCAGTTGTTTGAAGCCAGATCTTCACATATCTTTCAATTTTGGTGTCCTAGATAATCAAGATGACCTTGAATCAGGAAACCAGAATATGCAGTTGAGGAAGTTGTTTAGGGAACGGCTTTCAGAATTCACGAGTTCCCATCCAGAGTCTAGGAATAAAGTTCGTGGTGATACCAATGAGTTGATAGCTATCATTTGTATCATTGCCATTCAAGATATCCTGATTCTTCTCATTCAATTCGGAAGTCAATCTTCTCTTGTATACTGCGCTTTCAAAACTTTTTATGATCTAAGACAAGATTCCTATATTCAGATTGATGATGTTCCAAAGGGTTTGCTGCCGAAGCCATTCAATTTCCCAAGCCAAGATCATTTTCCAGAAACCAACTCTTCATCTTTCGAGCAACCGGCAGTGTCCTTTAACCATCATTCAGAAGAAAGTCAAGGTTTCCGCATAATTAAATCCATGGTGCCGAGTAAACGGAAGGAATTCATAGGGACATCTCATTTTTCACAAACTTTTAGCCGGCGTTTCTCCAGAAAAGTTACTAGAGATGTGGAGAAAACTGAGGAAGCCACAGAGCCTTGTGAACAAAGTTGGTCTCATTCTGATGCTGAGACAGAATTTTGTGAGCTTTCCAGTTCCTCCCCAGTTAAAGTACCTTCCAACTCAACCTGCCGTTCAGATTGTTTGGTAATTTCCACTCCTGCAAAACTTGTTTCAACCCCAGTTCGGCTGATGGCTTCCACGCCTGCAATTCCTCCACCAAAAAGAAGTTCCATGAGTTCTGATGATGATGATGATGATTCTTGCTCAGCAAACACGTTGGCGTGGGCTATGATTAGAAAGAGAGAGGCTCGAGTGGGATTCGAATCGAAAACCCCGTTCGACTTTTCCGAGAATACCGATCGATGGAGGAGAGGATTGATTCAAGTCATTGCATTGACCATCGGCAGCACAAAGAAGCCAGAAACTCAGATAACAATGGCTGATTTTCTATCAAATTCAACAATTCCGCAGCTCACGAAGACCCGCCAGTTCGTTGGCGATTGTGAAGACTTGCTTGCTGTCGCTCGCAAAGACCCGCTCGCCGTCGCTCGTGATGACCCGCCCACTCGCCGTCGCTCACGAAGACCCGCTCGTCGTCGCTCGCGAAGATCTTTCTCAGACCTGCTCGGAACTATCGTGCTCACGAAGACTTGCTCGCCATTGCTCGAAAAGATCTTGCTTGGATCTGCTCGGAAGTATCGTGCTCAGACCCGCCAGCTTGCTCTTCAGCGCTCAATGGCTAACACCAACCCAATTATCAAGAAGTCTGGACCTGTGGAGAAAGACCCTACTGCCTTTGAGGTGAAATATGGAAAAACTCCAATGGGCAATCCATCTTGGACCTCAACCAAGCTACTTCAATCAAGCTTGACAGAAACAACTTTCTGTTGTGGCAAAACATAG

Coding sequence (CDS)

ATGGACGCTTCAGAGAACCATGCGCTTTCGATTAAGAAATTGCCTGAGAAATTTGAGATTCTAAGTAGGTTTTTTGATAGCTTGGATTCTGCAATGCGGTTGTTACGATTGAAACGTTTACCATCGAAATTTTCTAATGTATGCCCCAAGGTTGAACTTCTCACTGATAGGAGGTTTTCACATGGTCGTTTGGCCCAACTGAAGTTTATTTTACCTGAAGCAATAGAGCTTAGGAAGGTCCTTGTCTTTGATGAGCAAACCAGTTGTTTGAAGCCAGATCTTCACATATCTTTCAATTTTGGTGTCCTAGATAATCAAGATGACCTTGAATCAGGAAACCAGAATATGCAGTTGAGGAAGTTGTTTAGGGAACGGCTTTCAGAATTCACGAGTTCCCATCCAGAGTCTAGGAATAAAGTTCGTGGTGATACCAATGAGTTGATAGCTATCATTTGTATCATTGCCATTCAAGATATCCTGATTCTTCTCATTCAATTCGGAAGTCAATCTTCTCTTGTATACTGCGCTTTCAAAACTTTTTATGATCTAAGACAAGATTCCTATATTCAGATTGATGATGTTCCAAAGGGTTTGCTGCCGAAGCCATTCAATTTCCCAAGCCAAGATCATTTTCCAGAAACCAACTCTTCATCTTTCGAGCAACCGGCAGTGTCCTTTAACCATCATTCAGAAGAAAGTCAAGGTTTCCGCATAATTAAATCCATGGTGCCGAGTAAACGGAAGGAATTCATAGGGACATCTCATTTTTCACAAACTTTTAGCCGGCGTTTCTCCAGAAAAGTTACTAGAGATGTGGAGAAAACTGAGGAAGCCACAGAGCCTTGTGAACAAAGTTGGTCTCATTCTGATGCTGAGACAGAATTTTGTGAGCTTTCCAGTTCCTCCCCAGTTAAAGTACCTTCCAACTCAACCTGCCGTTCAGATTGTTTGGTAATTTCCACTCCTGCAAAACTTGTTTCAACCCCAGTTCGGCTGATGGCTTCCACGCCTGCAATTCCTCCACCAAAAAGAAGTTCCATGAGTTCTGATGATGATGATGATGATTCTTGCTCAGCAAACACGTTGGCGTGGGCTATGATTAGAAAGAGAGAGGCTCGAGTGGGATTCGAATCGAAAACCCCGTTCGACTTTTCCGAGAATACCGATCGATGGAGGAGAGGATTGATTCAAGTCATTGCATTGACCATCGGCAGCACAAAGAAGCCAGAAACTCAGATAACAATGGCTGATTTTCTATCAAATTCAACAATTCCGCAGCTCACGAAGACCCGCCAGTTCGTTGGCGATTGTGAAGACTTGCTTGCTGTCGCTCGCAAAGACCCGCTCGCCGTCGCTCGTGATGACCCGCCCACTCGCCGTCGCTCACGAAGACCCGCTCGTCGTCGCTCGCGAAGATCTTTCTCAGACCTGCTCGGAACTATCGTGCTCACGAAGACTTGCTCGCCATTGCTCGAAAAGATCTTGCTTGGATCTGCTCGGAAGTATCGTGCTCAGACCCGCCAGCTTGCTCTTCAGCGCTCAATGGCTAACACCAACCCAATTATCAAGAAGTCTGGACCTGTGGAGAAAGACCCTACTGCCTTTGAGGTGAAATATGGAAAAACTCCAATGGGCAATCCATCTTGGACCTCAACCAAGCTACTTCAATCAAGCTTGACAGAAACAACTTTCTGTTGTGGCAAAACATAG

Protein sequence

MDASENHALSIKKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFILPEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTSSHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQIDDVPKGLLPKPFNFPSQDHFPETNSSSFEQPAVSFNHHSEESQGFRIIKSMVPSKRKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAETEFCELSSSSPVKVPSNSTCRSDCLVISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWAMIRKREARVGFESKTPFDFSENTDRWRRGLIQVIALTIGSTKKPETQITMADFLSNSTIPQLTKTRQFVGDCEDLLAVARKDPLAVARDDPPTRRRSRRPARRRSRRSFSDLLGTIVLTKTCSPLLEKILLGSARKYRAQTRQLALQRSMANTNPIIKKSGPVEKDPTAFEVKYGKTPMGNPSWTSTKLLQSSLTETTFCCGKT

Homology

[Close]

BLAST of Lag0040790 vs. NCBI nr
Match: XP_022967387.1 (CDT1-like protein b [Cucurbita maxima])

HSP 1 Score: 335.9 bits (860), Expect = 6.9e-88
Identity = 218/436 (50.00%), Postives = 260/436 (59.63%), Query Frame = 0


Query: 12  KKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFIL 71
           KKLPEKFE LS+FFDSLDS MRLLR K + S FSNVCPK+E+LTDRRFS+G LAQ+KFI+
Sbjct: 113 KKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIV 172

Query: 72  PEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTS 131
           PEAIEL+KVL+FDE+TSC+KPDLHISFNFGVLDN+DD+E+GNQ MQLRKLF+ RLSEF S
Sbjct: 173 PEAIELKKVLIFDERTSCMKPDLHISFNFGVLDNKDDVETGNQYMQLRKLFKARLSEFAS 232

Query: 132 SHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQI 191
           SHPE                                                       I
Sbjct: 233 SHPE-------------------------------------------------------I 292

Query: 192 DDVPKGLLPKPFNFPSQDHFPETNSSS----------FEQPAVS----FNHHSEESQGFR 251
           DDVPK LLPKPFN  SQD FP+TN  S           EQPA+S       HS E+QGFR
Sbjct: 293 DDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFR 352

Query: 252 IIKSMV----PSKRKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAET 311
           IIKS +    PSK+KE +G SHFS +F+RRFS+K +R++EKT +A++  +Q    SDAET
Sbjct: 353 IIKSTMTVTGPSKQKELMGLSHFSPSFTRRFSQKGSREMEKTGQASKRSDQIPFGSDAET 412

Query: 312 EFCELSSS---SPVKVPSNSTCRSDCL--------------------------------- 371
           +    SSS   SPVK+PSNSTC S+C                                  
Sbjct: 413 KIETESSSMLFSPVKLPSNSTCNSNCPENYASPLRSSAFPLPTTPSNMAARVAITNEDEP 472

Query: 372 ------VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWAMIRKRE 388
                 + STPAKLVSTP RLMASTPA+ PPKRSSM S DDDD S SAN L     R R 
Sbjct: 473 TAKTSDIESTPAKLVSTPARLMASTPAMAPPKRSSM-SPDDDDSSRSANKLVRRPPRSRS 490

[Close]

BLAST of Lag0040790 vs. NCBI nr
Match: XP_023553630.1 (CDT1-like protein b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 3.4e-87
Identity = 218/435 (50.11%), Postives = 257/435 (59.08%), Query Frame = 0


Query: 12  KKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFIL 71
           KKLPEKFE LS+FFDSLDS MRLLR K + S FSNVCPK+E+LTDRRFS+G LAQ+KFI+
Sbjct: 113 KKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIV 172

Query: 72  PEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTS 131
           PEAIEL+KV++FDE+TSC+KPDLHISFNF VLD +DDLE+GNQ MQLRKLF+ RLSEF S
Sbjct: 173 PEAIELKKVMIFDERTSCMKPDLHISFNFSVLDYKDDLETGNQYMQLRKLFKARLSEFAS 232

Query: 132 SHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQI 191
           SHPE                                                       I
Sbjct: 233 SHPE-------------------------------------------------------I 292

Query: 192 DDVPKGLLPKPFNFPSQDHFPETNSSS----------FEQPAVSFN---HHSEESQGFRI 251
           DDVPK LLPKPFN  SQD FP+TN  S           EQPA+S +    HS E+QGFRI
Sbjct: 293 DDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSSVAEDHSNENQGFRI 352

Query: 252 IKSMV----PSKRKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAETE 311
           IKS +    PSK+KE IG SHFS +F+RRFS+KV R+ EKT +A +  +Q    SDAET+
Sbjct: 353 IKSTMTVTGPSKQKELIGLSHFSPSFTRRFSQKVNRETEKTGQAAKRSDQIPFCSDAETK 412

Query: 312 FCELSSS---SPVKVPSNSTCRSDCL---------------------------------- 371
               SSS   SPVK+PSNSTC S+C                                   
Sbjct: 413 VETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDPT 472

Query: 372 -----VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWAMIRKREA 388
                + STPAKLVSTP RLMASTPA+ PPKRSSM S DDDD S SAN L     R R  
Sbjct: 473 AKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSM-SPDDDDSSRSANKLVRRPPRSRS- 489

[Close]

BLAST of Lag0040790 vs. NCBI nr
Match: KAG6571515.1 (CDT1-like protein a, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332.8 bits (852), Expect = 5.8e-87
Identity = 217/436 (49.77%), Postives = 257/436 (58.94%), Query Frame = 0


Query: 12  KKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFIL 71
           KKLPEKFE LS+FFDSLDS MRLLR K + S FSNVCPK+E+LTDRRFS+G LAQ+KFI+
Sbjct: 113 KKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIV 172

Query: 72  PEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTS 131
           PEAIEL+KV++FDE+TSC+KPDLHISFNF VLDN+D+LE+GNQ MQLRKLF+ RLSEF S
Sbjct: 173 PEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFAS 232

Query: 132 SHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQI 191
           SHPE                                                       I
Sbjct: 233 SHPE-------------------------------------------------------I 292

Query: 192 DDVPKGLLPKPFNFPSQDHFPETNSSS----------FEQPAVS----FNHHSEESQGFR 251
           DDVPK LLPKPFN  SQD FP+TN  S           EQPA+S       HS E+QGFR
Sbjct: 293 DDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFR 352

Query: 252 IIKSMV----PSKRKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAET 311
           IIKS +    PSK+KE IG SHFS +F+R FS+KV R++EKT +A +  +Q    SDAET
Sbjct: 353 IIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAET 412

Query: 312 EFCELSSS---SPVKVPSNSTCRSDCL--------------------------------- 371
           +    SSS   SPVK+PSNSTC S+C                                  
Sbjct: 413 KIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDP 472

Query: 372 ------VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWAMIRKRE 388
                 + STPAKLVSTP RLMASTPA+ PPKRSSM S DDDD S SAN L     R R 
Sbjct: 473 TAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSM-SPDDDDSSRSANKLVRRPPRSRS 490

[Close]

BLAST of Lag0040790 vs. NCBI nr
Match: XP_022146049.1 (CDT1-like protein b [Momordica charantia])

HSP 1 Score: 331.6 bits (849), Expect = 1.3e-86
Identity = 221/442 (50.00%), Postives = 260/442 (58.82%), Query Frame = 0


Query: 13  KLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFILP 72
           ++PEKF+ILS FFDSLD AMRLLRL+ L S FSN+CPK+E LTDRRFS+G LAQLKFILP
Sbjct: 111 EIPEKFQILSLFFDSLDRAMRLLRLRGLASNFSNICPKIEYLTDRRFSYGHLAQLKFILP 170

Query: 73  EAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTSS 132
           EAIEL+KV VFDE+TSC+KPDLHISFN GVLDNQ+ LE+G+QN+ LRKLF  RLSEF SS
Sbjct: 171 EAIELKKVHVFDERTSCMKPDLHISFNLGVLDNQESLETGSQNLNLRKLFCTRLSEFVSS 230

Query: 133 HPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQID 192
           HPE                                                       ID
Sbjct: 231 HPE-------------------------------------------------------ID 290

Query: 193 DVPKGLLPKPFNFPSQDHFPETNS-----SSFEQPAVSFN--------HHSEESQGFRII 252
           +VPKGLLP+PFN  SQD F +TNS     ++ EQPA+S          +HSEES GFRI+
Sbjct: 291 EVPKGLLPEPFNRSSQDLFRKTNSLSPVETAPEQPAISSTNDAEGIPFNHSEESLGFRIV 350

Query: 253 KSMV------PSKRKEFIGTSHFSQTFSRRFSRK-VTRDVEKTEEATEPCEQSWSHSDAE 312
           KS V      PSK+K  IG SHFSQ+FSRRFS+K V+R+VEKT++AT PC Q+ SHSDAE
Sbjct: 351 KSTVPRTVVDPSKQKNLIGASHFSQSFSRRFSQKVVSREVEKTDQATRPCAQNPSHSDAE 410

Query: 313 ----TEFCELSSS----SPVKVPSNSTCRSDCL--------------------------- 372
               TEFC    S    SPVK+PSNSTC S+                             
Sbjct: 411 TNIKTEFCNAVPSSKPLSPVKLPSNSTCDSNYFENYASPIRVSAPPLPSTPIDMAVRGTS 470

Query: 373 ------------VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWA 388
                       + STPAKLVSTPVRLMA TPA+PPPKRSS S    DD S SAN L   
Sbjct: 471 TNEDYPSAKTNDIDSTPAKLVSTPVRLMAITPAMPPPKRSSRS--PHDDSSWSANKLIRR 493

[Close]

BLAST of Lag0040790 vs. NCBI nr
Match: XP_022963958.1 (CDT1-like protein b [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 4.2e-85
Identity = 215/436 (49.31%), Postives = 256/436 (58.72%), Query Frame = 0


Query: 12  KKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFIL 71
           KKL EKFEILS+FFDSLDS MRLLR K + S FSNVCPK+E+LTDRRFS+G LAQ+KFI+
Sbjct: 113 KKLTEKFEILSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIV 172

Query: 72  PEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTS 131
           PEAIEL+KV++FDE+TSC+KPDLHISFNF VLDN+D+LE+GNQ MQLRKLF+ RLSEF S
Sbjct: 173 PEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFAS 232

Query: 132 SHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQI 191
           SHPE                                                       I
Sbjct: 233 SHPE-------------------------------------------------------I 292

Query: 192 DDVPKGLLPKPFNFPSQDHFPETNSSS----------FEQPAVS----FNHHSEESQGFR 251
           DDVPK LLPKPFN  SQD FP+TN  S           EQPA+S       HS E+QGFR
Sbjct: 293 DDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFR 352

Query: 252 IIKSMV----PSKRKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAET 311
           IIKS +    PSK+KE IG SHFS +F+R FS+KV R++EKT +A +  +Q    SDAET
Sbjct: 353 IIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAET 412

Query: 312 EFCELSSS---SPVKVPSNSTCRSDCL--------------------------------- 371
           +    SSS   SPVK+PS STC S+C                                  
Sbjct: 413 KIETESSSMPFSPVKLPSYSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDP 472

Query: 372 ------VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWAMIRKRE 388
                 + STPAKLVSTP RLMASTPA+ PPKRSSM S D+DD S SAN L     R R 
Sbjct: 473 TAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSM-SPDEDDSSRSANKLVRRPPRSRS 490

[Close]

BLAST of Lag0040790 vs. ExPASy Swiss-Prot
Match: Q9M1S9 (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.6e-29
Identity = 109/359 (30.36%), Postives = 162/359 (45.13%), Query Frame = 0


Query: 10  SIKKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKF 69
           S+ KLPE+FEIL  FF+ LD+A+RLL+LK   + ++N+CPK+E LT+R FS+  LAQ+K 
Sbjct: 42  SVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSYDHLAQMKH 101

Query: 70  ILPEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEF 129
           I PEAIEL++VL F E T C+KP LHI  N   +  +D +  G + M+LRK+F  +L +F
Sbjct: 102 IYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTI-CGTKYMELRKVFHSKLVDF 161

Query: 130 TSSHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYI 189
             +HP+                                                      
Sbjct: 162 RKAHPK------------------------------------------------------ 221

Query: 190 QIDDVPKGLLPKPFNFPSQDHFPETNSSSFEQPAV---SFNHHSEESQGFRIIKSMVPSK 249
             D++PK LLP+PFN P +D +    S    +P +    F+ H EE              
Sbjct: 222 --DEIPKELLPEPFNSPQRDSYSGIVSVGLGEPKLEVGGFDVHMEE-------------- 281

Query: 250 RKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAETEFCELSSSSPVKV 309
                                    +E+ E+         + S  E+   E    +PVK 
Sbjct: 282 -------------------------IEQEEQDVNKVIPDSTLSHIESRIVE----TPVK- 288

Query: 310 PSNSTCRSDCLVISTPAKLVSTPVRLMASTPAIPPPKRS-SMSSDDDDDDSC-SANTLA 364
                       +STP+K +STP+RLM++TP +   KR   ++ +  DD+S  S N+LA
Sbjct: 342 -----------DLSTPSKDLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLA 288

[Close]

BLAST of Lag0040790 vs. ExPASy Swiss-Prot
Match: Q9SJW9 (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-28
Identity = 60/132 (45.45%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 4   SENHALSIKKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGR 63
           S N     +KLPEK+E L +FF++LD++M L +L+     FSN+  ++E LT+RRF +  
Sbjct: 101 SSNKNAEKEKLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSH 160

Query: 64  LAQLKFILPEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFR 123
           LAQ+K ILPEAIE+++VL+ DE T C+KPDLH++ N   ++  D  +S ++ + LRK+FR
Sbjct: 161 LAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFR 220

Query: 124 ERLSEFTSSHPE 136
            RL++F  +HP+
Sbjct: 221 ARLADFVKAHPQ 232

[Close]

BLAST of Lag0040790 vs. ExPASy TrEMBL
Match: A0A6J1HQP8 (CDT1-like protein b OS=Cucurbita maxima OX=3661 GN=LOC111466932 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.3e-88
Identity = 218/436 (50.00%), Postives = 260/436 (59.63%), Query Frame = 0


Query: 12  KKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFIL 71
           KKLPEKFE LS+FFDSLDS MRLLR K + S FSNVCPK+E+LTDRRFS+G LAQ+KFI+
Sbjct: 113 KKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIV 172

Query: 72  PEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTS 131
           PEAIEL+KVL+FDE+TSC+KPDLHISFNFGVLDN+DD+E+GNQ MQLRKLF+ RLSEF S
Sbjct: 173 PEAIELKKVLIFDERTSCMKPDLHISFNFGVLDNKDDVETGNQYMQLRKLFKARLSEFAS 232

Query: 132 SHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQI 191
           SHPE                                                       I
Sbjct: 233 SHPE-------------------------------------------------------I 292

Query: 192 DDVPKGLLPKPFNFPSQDHFPETNSSS----------FEQPAVS----FNHHSEESQGFR 251
           DDVPK LLPKPFN  SQD FP+TN  S           EQPA+S       HS E+QGFR
Sbjct: 293 DDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFR 352

Query: 252 IIKSMV----PSKRKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAET 311
           IIKS +    PSK+KE +G SHFS +F+RRFS+K +R++EKT +A++  +Q    SDAET
Sbjct: 353 IIKSTMTVTGPSKQKELMGLSHFSPSFTRRFSQKGSREMEKTGQASKRSDQIPFGSDAET 412

Query: 312 EFCELSSS---SPVKVPSNSTCRSDCL--------------------------------- 371
           +    SSS   SPVK+PSNSTC S+C                                  
Sbjct: 413 KIETESSSMLFSPVKLPSNSTCNSNCPENYASPLRSSAFPLPTTPSNMAARVAITNEDEP 472

Query: 372 ------VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWAMIRKRE 388
                 + STPAKLVSTP RLMASTPA+ PPKRSSM S DDDD S SAN L     R R 
Sbjct: 473 TAKTSDIESTPAKLVSTPARLMASTPAMAPPKRSSM-SPDDDDSSRSANKLVRRPPRSRS 490

[Close]

BLAST of Lag0040790 vs. ExPASy TrEMBL
Match: A0A6J1CX08 (CDT1-like protein b OS=Momordica charantia OX=3673 GN=LOC111015352 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 6.3e-87
Identity = 221/442 (50.00%), Postives = 260/442 (58.82%), Query Frame = 0


Query: 13  KLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFILP 72
           ++PEKF+ILS FFDSLD AMRLLRL+ L S FSN+CPK+E LTDRRFS+G LAQLKFILP
Sbjct: 111 EIPEKFQILSLFFDSLDRAMRLLRLRGLASNFSNICPKIEYLTDRRFSYGHLAQLKFILP 170

Query: 73  EAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTSS 132
           EAIEL+KV VFDE+TSC+KPDLHISFN GVLDNQ+ LE+G+QN+ LRKLF  RLSEF SS
Sbjct: 171 EAIELKKVHVFDERTSCMKPDLHISFNLGVLDNQESLETGSQNLNLRKLFCTRLSEFVSS 230

Query: 133 HPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQID 192
           HPE                                                       ID
Sbjct: 231 HPE-------------------------------------------------------ID 290

Query: 193 DVPKGLLPKPFNFPSQDHFPETNS-----SSFEQPAVSFN--------HHSEESQGFRII 252
           +VPKGLLP+PFN  SQD F +TNS     ++ EQPA+S          +HSEES GFRI+
Sbjct: 291 EVPKGLLPEPFNRSSQDLFRKTNSLSPVETAPEQPAISSTNDAEGIPFNHSEESLGFRIV 350

Query: 253 KSMV------PSKRKEFIGTSHFSQTFSRRFSRK-VTRDVEKTEEATEPCEQSWSHSDAE 312
           KS V      PSK+K  IG SHFSQ+FSRRFS+K V+R+VEKT++AT PC Q+ SHSDAE
Sbjct: 351 KSTVPRTVVDPSKQKNLIGASHFSQSFSRRFSQKVVSREVEKTDQATRPCAQNPSHSDAE 410

Query: 313 ----TEFCELSSS----SPVKVPSNSTCRSDCL--------------------------- 372
               TEFC    S    SPVK+PSNSTC S+                             
Sbjct: 411 TNIKTEFCNAVPSSKPLSPVKLPSNSTCDSNYFENYASPIRVSAPPLPSTPIDMAVRGTS 470

Query: 373 ------------VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWA 388
                       + STPAKLVSTPVRLMA TPA+PPPKRSS S    DD S SAN L   
Sbjct: 471 TNEDYPSAKTNDIDSTPAKLVSTPVRLMAITPAMPPPKRSSRS--PHDDSSWSANKLIRR 493

[Close]

BLAST of Lag0040790 vs. ExPASy TrEMBL
Match: A0A6J1HJE5 (CDT1-like protein b OS=Cucurbita moschata OX=3662 GN=LOC111464103 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-85
Identity = 215/436 (49.31%), Postives = 256/436 (58.72%), Query Frame = 0


Query: 12  KKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFIL 71
           KKL EKFEILS+FFDSLDS MRLLR K + S FSNVCPK+E+LTDRRFS+G LAQ+KFI+
Sbjct: 113 KKLTEKFEILSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIV 172

Query: 72  PEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTS 131
           PEAIEL+KV++FDE+TSC+KPDLHISFNF VLDN+D+LE+GNQ MQLRKLF+ RLSEF S
Sbjct: 173 PEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFAS 232

Query: 132 SHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQI 191
           SHPE                                                       I
Sbjct: 233 SHPE-------------------------------------------------------I 292

Query: 192 DDVPKGLLPKPFNFPSQDHFPETNSSS----------FEQPAVS----FNHHSEESQGFR 251
           DDVPK LLPKPFN  SQD FP+TN  S           EQPA+S       HS E+QGFR
Sbjct: 293 DDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFR 352

Query: 252 IIKSMV----PSKRKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAET 311
           IIKS +    PSK+KE IG SHFS +F+R FS+KV R++EKT +A +  +Q    SDAET
Sbjct: 353 IIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAET 412

Query: 312 EFCELSSS---SPVKVPSNSTCRSDCL--------------------------------- 371
           +    SSS   SPVK+PS STC S+C                                  
Sbjct: 413 KIETESSSMPFSPVKLPSYSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDP 472

Query: 372 ------VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAWAMIRKRE 388
                 + STPAKLVSTP RLMASTPA+ PPKRSSM S D+DD S SAN L     R R 
Sbjct: 473 TAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSM-SPDEDDSSRSANKLVRRPPRSRS 490

[Close]

BLAST of Lag0040790 vs. ExPASy TrEMBL
Match: A0A5A7TNU2 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00640 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-74
Identity = 202/470 (42.98%), Postives = 253/470 (53.83%), Query Frame = 0


Query: 12  KKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFIL 71
           KK PEKFE+L +FF SLDSAMRLLR K + S FSNVCPK+E LTDRRF++G LAQ KFIL
Sbjct: 114 KKFPEKFEMLCKFFYSLDSAMRLLRFKGVASNFSNVCPKIEALTDRRFTYGHLAQFKFIL 173

Query: 72  PEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTS 131
            EAI L+KVLV+DE+T C+KPDLHISFNFGV +NQ+D     Q MQLRKLFR RLSEF S
Sbjct: 174 REAIVLKKVLVYDERTCCMKPDLHISFNFGVPENQED-----QYMQLRKLFRARLSEFVS 233

Query: 132 SHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQI 191
           S+PE+                                                       
Sbjct: 234 SYPET------------------------------------------------------- 293

Query: 192 DDVPKGLLPKPFNFPSQDHFPETNSSSF----------EQP-----AVSFNHHSEESQGF 251
           DDVPK LLP PFNF SQD   ++NS S           EQP      +SFNHHSEE QGF
Sbjct: 294 DDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSIEGISFNHHSEEHQGF 353

Query: 252 RIIKSMV----PSKRKEFIGTSHFSQTFSRRFSRKVT-RDVEKTEEATEPCEQSWSHSDA 311
           R++KS +    PSK+KEFIG SHFS +FSRRFS+KV  R++   ++ T+P  Q  S++D 
Sbjct: 354 RMVKSTMPVTDPSKQKEFIGLSHFSPSFSRRFSQKVVDREIANNDQVTKPSNQVSSYTDV 413

Query: 312 ET----EFCELSSS----SPVKVPSNSTCRSDCL-------------------------- 371
           ET    E   ++SS    SP+K+PSNSTC  +C                           
Sbjct: 414 ETNIDMESSVVASSTEPFSPIKLPSNSTCNVNCHKNYASPIRCSALALPTTPSNTVGRVT 473

Query: 372 -------------VISTPAKLVSTPVRLMASTPAIPPPKRSSMSSDDDDDDSCSANTLAW 414
                        + STP KL+STP +LM +TPA+PPPKRSSM+   DDD S S N L  
Sbjct: 474 MMVECDQSAKANDIDSTPGKLLSTPTQLMTNTPAMPPPKRSSMT--PDDDSSFSTNKLVR 521

[Close]

BLAST of Lag0040790 vs. ExPASy TrEMBL
Match: A0A5D3DKW1 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00410 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.7e-74
Identity = 195/426 (45.77%), Postives = 236/426 (55.40%), Query Frame = 0


Query: 12  KKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKFIL 71
           KK PEKFE+L +FF SLDSAMRLLR K + S FSNVCPK+E LTDRRF++G LAQ KFIL
Sbjct: 114 KKFPEKFEMLCKFFYSLDSAMRLLRFKGVASNFSNVCPKIEALTDRRFTYGHLAQFKFIL 173

Query: 72  PEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEFTS 131
            EAI L+KVLV+DE+T C+KPDLHISFNFGV +NQ+D     Q MQLRKLFR RLSEF S
Sbjct: 174 REAIVLKKVLVYDERTCCMKPDLHISFNFGVPENQED-----QYMQLRKLFRARLSEFVS 233

Query: 132 SHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYIQI 191
           S+PE+                                                       
Sbjct: 234 SYPET------------------------------------------------------- 293

Query: 192 DDVPKGLLPKPFNFPSQDHFPETNSSSF----------EQP-----AVSFNHHSEESQGF 251
           DDVPK LLP PFNF SQD   ++NS S           EQP      +SFNHHSEE QGF
Sbjct: 294 DDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSIEGISFNHHSEEHQGF 353

Query: 252 RIIKSMV----PSKRKEFIGTSHFSQTFSRRFSRKVT-RDVEKTEEATEPCEQSWSHSDA 311
           R++KS +    PSK+KEFIG SHFS +FSRRFS+KV  R++   ++ T+P  Q  S++D 
Sbjct: 354 RMVKSTMPVTDPSKQKEFIGLSHFSPSFSRRFSQKVVDREIANNDQVTKPSNQVSSYTDV 413

Query: 312 ET----EFCELSSS----SPVKVPSNSTCRSDCL-------------------------- 371
           ET    E   ++SS    SP+K+PSNSTC  +C                           
Sbjct: 414 ETNIDMESSVVASSTEPFSPIKLPSNSTCNVNCHKNYASPIRCSALALPTTPSNTVGRVT 473

[Close]

BLAST of Lag0040790 vs. TAIR 10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B )

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-30
Identity = 109/359 (30.36%), Postives = 162/359 (45.13%), Query Frame = 0


Query: 10  SIKKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGRLAQLKF 69
           S+ KLPE+FEIL  FF+ LD+A+RLL+LK   + ++N+CPK+E LT+R FS+  LAQ+K 
Sbjct: 42  SVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSYDHLAQMKH 101

Query: 70  ILPEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFRERLSEF 129
           I PEAIEL++VL F E T C+KP LHI  N   +  +D +  G + M+LRK+F  +L +F
Sbjct: 102 IYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTI-CGTKYMELRKVFHSKLVDF 161

Query: 130 TSSHPESRNKVRGDTNELIAIICIIAIQDILILLIQFGSQSSLVYCAFKTFYDLRQDSYI 189
             +HP+                                                      
Sbjct: 162 RKAHPK------------------------------------------------------ 221

Query: 190 QIDDVPKGLLPKPFNFPSQDHFPETNSSSFEQPAV---SFNHHSEESQGFRIIKSMVPSK 249
             D++PK LLP+PFN P +D +    S    +P +    F+ H EE              
Sbjct: 222 --DEIPKELLPEPFNSPQRDSYSGIVSVGLGEPKLEVGGFDVHMEE-------------- 281

Query: 250 RKEFIGTSHFSQTFSRRFSRKVTRDVEKTEEATEPCEQSWSHSDAETEFCELSSSSPVKV 309
                                    +E+ E+         + S  E+   E    +PVK 
Sbjct: 282 -------------------------IEQEEQDVNKVIPDSTLSHIESRIVE----TPVK- 288

Query: 310 PSNSTCRSDCLVISTPAKLVSTPVRLMASTPAIPPPKRS-SMSSDDDDDDSC-SANTLA 364
                       +STP+K +STP+RLM++TP +   KR   ++ +  DD+S  S N+LA
Sbjct: 342 -----------DLSTPSKDLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLA 288

[Close]

BLAST of Lag0040790 vs. TAIR 10
Match: AT2G31270.1 (homolog of yeast CDT1 A )

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-29
Identity = 60/132 (45.45%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 4   SENHALSIKKLPEKFEILSRFFDSLDSAMRLLRLKRLPSKFSNVCPKVELLTDRRFSHGR 63
           S N     +KLPEK+E L +FF++LD++M L +L+     FSN+  ++E LT+RRF +  
Sbjct: 101 SSNKNAEKEKLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSH 160

Query: 64  LAQLKFILPEAIELRKVLVFDEQTSCLKPDLHISFNFGVLDNQDDLESGNQNMQLRKLFR 123
           LAQ+K ILPEAIE+++VL+ DE T C+KPDLH++ N   ++  D  +S ++ + LRK+FR
Sbjct: 161 LAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFR 220

Query: 124 ERLSEFTSSHPE 136
            RL++F  +HP+
Sbjct: 221 ARLADFVKAHPQ 232

The following BLAST results are available for this feature:

BLAST of Lag0040790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967387.1	6.9e-88	50.00	CDT1-like protein b [Cucurbita maxima]	[more]
XP_023553630.1	3.4e-87	50.11	CDT1-like protein b [Cucurbita pepo subsp. pepo]	[more]
KAG6571515.1	5.8e-87	49.77	CDT1-like protein a, chloroplastic, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022146049.1	1.3e-86	50.00	CDT1-like protein b [Momordica charantia]	[more]
XP_022963958.1	4.2e-85	49.31	CDT1-like protein b [Cucurbita moschata]	[more]

BLAST of Lag0040790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S9	2.6e-29	30.36	CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1	[more]
Q9SJW9	1.7e-28	45.45	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1...	[more]

BLAST of Lag0040790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQP8	3.3e-88	50.00	CDT1-like protein b OS=Cucurbita maxima OX=3661 GN=LOC111466932 PE=3 SV=1	[more]
A0A6J1CX08	6.3e-87	50.00	CDT1-like protein b OS=Momordica charantia OX=3673 GN=LOC111015352 PE=3 SV=1	[more]
A0A6J1HJE5	2.0e-85	49.31	CDT1-like protein b OS=Cucurbita moschata OX=3662 GN=LOC111464103 PE=3 SV=1	[more]
A0A5A7TNU2	1.6e-74	42.98	CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639...	[more]
A0A5D3DKW1	4.7e-74	45.77	CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G0...	[more]

BLAST of Lag0040790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54710.1	1.8e-30	30.36	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]
AT2G31270.1	1.2e-29	45.45	homolog of yeast CDT1 A	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014939	CDT1 Geminin-binding domain-like	SMART	SM01075	CDT1_2	coord: 14..137 e-value: 3.5E-12 score: 56.5
IPR014939	CDT1 Geminin-binding domain-like	PFAM	PF08839	CDT1	coord: 14..84 e-value: 8.4E-11 score: 42.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 451..471
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..355
None	No IPR available	PANTHER	PTHR28637	DNA REPLICATION FACTOR CDT1	coord: 12..359
None	No IPR available	CDD	cd08674	Cdt1_m	coord: 13..135 e-value: 4.07418E-35 score: 128.582
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 13..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040790.1	Lag0040790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle