
Lag0040746 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCATGCGTTGGCCAACCAAAGCGTCAAGAAAATCACAATATATAGCAGTGCAGTCCAAGCCAATCTCTTTACCCTCAATTCAAACAAAGCCCTCTGGTTGCACCATTTTGAAAAGGACATGGCATCGACGGCACGAACCAACTGTGTGAAATTAAGGCTTTTGATTCACTCGAAATCACAAAGAGTTCTTTTTGGTGAAGCTGACCAGAACTTGATCGACATTCTTTTCAATCTACTTTCCCACCCACATGGGGCTGTCGTCAGGCCATTGCAAAAGCAAAACATTTTGGGCTCTTTGAAAAATCTGTATGAGAGTGTACAAGCTTTGAAAAACCCAACCAAATATTTGGCACTATTCATTGAAAAAACCAGAGTGAGTATATTGATGCAAGGGCTTCAGGCCGAGCCGATGACTCGAGAAAAGGGTGGGATGAGTTACATGGTGATGGACGACATGTCGTTGAAGCCCATGTCCTCCATCTCTACTTTAACCCTTTTGAACAAGTTCAAGGTCAAGAAAGTTGGTGACTTGGAAGAGAAAATTGTCACTTTAGATATCCATGAGGTAATATATGTTCCTATAATATTTATCGTGATATTAGAGCTTACAAAATGTCAATTTCTCTTTGATTAATATCGATATAACTTCTAAGCATTGTGCAAATTTCTAAACTTACAAGTGGGATGGAGTATTGAAGTATATCGATATAATATTAAGTTTTTGAGTTTATTAGTGACGATTTCGTAGATATATGTTAAAAATGTATAATTAGTTTTTGAGATTATTTTTGTTGCTTCGTAGGTTGTGAAGTTGTTGAAGGTCTCTATTCACTCGAAGACGGTTCTCACCGATGAGTTTTTGAAAAAGAATCAATTGCTGACTATTATTTCAAAAATGATGTATCTGTTTAAGTGGTTGTTGATTTATTGTTTAGGGCTTTTTATTTTTGTTGCGACTGTTAGTGAAATGTCTCGTTAG ATGTTGCATGCGTTGGCCAACCAAAGCGTCAAGAAAATCACAATATATAGCAGTGCAGTCCAAGCCAATCTCTTTACCCTCAATTCAAACAAAGCCCTCTGGTTGCACCATTTTGAAAAGGACATGGCATCGACGGCACGAACCAACTGTGTGAAATTAAGGCTTTTGATTCACTCGAAATCACAAAGAGTTCTTTTTGGTGAAGCTGACCAGAACTTGATCGACATTCTTTTCAATCTACTTTCCCACCCACATGGGGCTGTCGTCAGGCCATTGCAAAAGCAAAACATTTTGGGCTCTTTGAAAAATCTGTATGAGAGTGTACAAGCTTTGAAAAACCCAACCAAATATTTGGCACTATTCATTGAAAAAACCAGAGTGAGTATATTGATGCAAGGGCTTCAGGCCGAGCCGATGACTCGAGAAAAGGGTGGGATGAGTTACATGGTGATGGACGACATGTCGTTGAAGCCCATGTCCTCCATCTCTACTTTAACCCTTTTGAACAAGTTCAAGGTCAAGAAAGTTGGTGACTTGGAAGAGAAAATTGTCACTTTAGATATCCATGAGGTTGTGAAGTTGTTGAAGGTCTCTATTCACTCGAAGACGGTTCTCACCGATGAGTTTTTGAAAAAGAATCAATTGCTGACTATTATTTCAAAAATGATGTATCTGTTTAAGTGGTTGTTGATTTATTGTTTAGGGCTTTTTATTTTTGTTGCGACTGTTAGTGAAATGTCTCGTTAG ATGTTGCATGCGTTGGCCAACCAAAGCGTCAAGAAAATCACAATATATAGCAGTGCAGTCCAAGCCAATCTCTTTACCCTCAATTCAAACAAAGCCCTCTGGTTGCACCATTTTGAAAAGGACATGGCATCGACGGCACGAACCAACTGTGTGAAATTAAGGCTTTTGATTCACTCGAAATCACAAAGAGTTCTTTTTGGTGAAGCTGACCAGAACTTGATCGACATTCTTTTCAATCTACTTTCCCACCCACATGGGGCTGTCGTCAGGCCATTGCAAAAGCAAAACATTTTGGGCTCTTTGAAAAATCTGTATGAGAGTGTACAAGCTTTGAAAAACCCAACCAAATATTTGGCACTATTCATTGAAAAAACCAGAGTGAGTATATTGATGCAAGGGCTTCAGGCCGAGCCGATGACTCGAGAAAAGGGTGGGATGAGTTACATGGTGATGGACGACATGTCGTTGAAGCCCATGTCCTCCATCTCTACTTTAACCCTTTTGAACAAGTTCAAGGTCAAGAAAGTTGGTGACTTGGAAGAGAAAATTGTCACTTTAGATATCCATGAGGTTGTGAAGTTGTTGAAGGTCTCTATTCACTCGAAGACGGTTCTCACCGATGAGTTTTTGAAAAAGAATCAATTGCTGACTATTATTTCAAAAATGATGTATCTGTTTAAGTGGTTGTTGATTTATTGTTTAGGGCTTTTTATTTTTGTTGCGACTGTTAGTGAAATGTCTCGTTAG MLHALANQSVKKITIYSSAVQANLFTLNSNKALWLHHFEKDMASTARTNCVKLRLLIHSKSQRVLFGEADQNLIDILFNLLSHPHGAVVRPLQKQNILGSLKNLYESVQALKNPTKYLALFIEKTRVSILMQGLQAEPMTREKGGMSYMVMDDMSLKPMSSISTLTLLNKFKVKKVGDLEEKIVTLDIHEVVKLLKVSIHSKTVLTDEFLKKNQLLTIISKMMYLFKWLLIYCLGLFIFVATVSEMSR Homology
BLAST of Lag0040746 vs. NCBI nr
Match: XP_022138964.1 (uncharacterized protein LOC111010013 [Momordica charantia]) HSP 1 Score: 143.3 bits (360), Expect = 2.8e-30 Identity = 96/231 (41.56%), Postives = 125/231 (54.11%), Query Frame = 0
BLAST of Lag0040746 vs. NCBI nr
Match: XP_008461735.1 (PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF674 domain-containing protein [Cucumis melo var. makuwa] >TYJ97778.1 DUF674 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 142.1 bits (357), Expect = 6.3e-30 Identity = 92/222 (41.44%), Postives = 129/222 (58.11%), Query Frame = 0
BLAST of Lag0040746 vs. NCBI nr
Match: XP_004147723.1 (uncharacterized protein LOC101207526 [Cucumis sativus]) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-28 Identity = 94/233 (40.34%), Postives = 132/233 (56.65%), Query Frame = 0
BLAST of Lag0040746 vs. NCBI nr
Match: XP_022139194.1 (uncharacterized protein LOC111010162 [Momordica charantia]) HSP 1 Score: 136.0 bits (341), Expect = 4.5e-28 Identity = 95/227 (41.85%), Postives = 119/227 (52.42%), Query Frame = 0
BLAST of Lag0040746 vs. NCBI nr
Match: KAA3481709.1 (DUF674 domain-containing protein [Gossypium australe]) HSP 1 Score: 132.9 bits (333), Expect = 3.8e-27 Identity = 78/186 (41.94%), Postives = 114/186 (61.29%), Query Frame = 0
BLAST of Lag0040746 vs. ExPASy TrEMBL
Match: A0A6J1CBJ8 (uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010013 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30 Identity = 96/231 (41.56%), Postives = 125/231 (54.11%), Query Frame = 0
BLAST of Lag0040746 vs. ExPASy TrEMBL
Match: A0A5A7U8V2 (DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3341G00030 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.1e-30 Identity = 92/222 (41.44%), Postives = 129/222 (58.11%), Query Frame = 0
BLAST of Lag0040746 vs. ExPASy TrEMBL
Match: A0A1S3CGQ2 (uncharacterized protein LOC103500268 OS=Cucumis melo OX=3656 GN=LOC103500268 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.1e-30 Identity = 92/222 (41.44%), Postives = 129/222 (58.11%), Query Frame = 0
BLAST of Lag0040746 vs. ExPASy TrEMBL
Match: A0A6J1CC87 (uncharacterized protein LOC111010162 OS=Momordica charantia OX=3673 GN=LOC111010162 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.2e-28 Identity = 95/227 (41.85%), Postives = 119/227 (52.42%), Query Frame = 0
BLAST of Lag0040746 vs. ExPASy TrEMBL
Match: A0A5B6WIU2 (DUF674 domain-containing protein OS=Gossypium australe OX=47621 GN=EPI10_022051 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27 Identity = 78/186 (41.94%), Postives = 114/186 (61.29%), Query Frame = 0
BLAST of Lag0040746 vs. TAIR 10
Match: AT3G09120.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 53.5 bits (127), Expect = 2.8e-07 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of Lag0040746 vs. TAIR 10
Match: AT3G09110.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06 Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Lag0040746 vs. TAIR 10
Match: AT5G43240.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06 Identity = 24/75 (32.00%), Postives = 46/75 (61.33%), Query Frame = 0
HSP 2 Score: 33.5 bits (75), Expect = 3.0e-01 Identity = 24/66 (36.36%), Postives = 35/66 (53.03%), Query Frame = 0
BLAST of Lag0040746 vs. TAIR 10
Match: AT5G43240.3 (Protein of unknown function (DUF674) ) HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06 Identity = 24/75 (32.00%), Postives = 46/75 (61.33%), Query Frame = 0
HSP 2 Score: 33.5 bits (75), Expect = 3.0e-01 Identity = 24/66 (36.36%), Postives = 35/66 (53.03%), Query Frame = 0
BLAST of Lag0040746 vs. TAIR 10
Match: AT3G09140.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 48.9 bits (115), Expect = 6.8e-06 Identity = 25/75 (33.33%), Postives = 44/75 (58.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|