Lag0040741 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0040741
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionProtein of unknown function (DUF674)
Locationchr13: 7853130 .. 7853666 (-)
RNA-Seq ExpressionLag0040741
SyntenyLag0040741
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCATGAGTTGGCCAACCAAAGCGTCAAGAAAATCACAATATATGGCAGTGCAGTCCAAGCCAATCTCTTTACCCTCAATTCAAACAAAGCCCTCTGGTTGCACCATTTTGAAAAGGACATGGCATCGACGGCACGAACCAGCTGTGTGAAATTAAGGCTTTTGATTGACTCGAAATCACAAAGAGTTCTTTTTGGTGAAGCTGACCAGAACTTGATCGACATTCTTTTCAATCTACTTTCCCACCCACATGGGGCTGTCGTCAGGCCATTGCAAAAGCAAAAAATTTTGGGCTCTTTGAAAAATCTGTATGAGAGTGTACAAGCTTTGAAAAACCCAACCAAATATTTGGCACTATTCATTGAAAAAACCAGAGTGAGTATATTGATGCAAGGGCTTCAGGCCGAGCCGATGACTCGAGAAAAGGGTGGGATGAGTTACATGGTGATGGACGACATGTCGTTGAAACCCATGTCGTTGATTCTTGTTTTTTTTTTTAATGATGGGTTGAAACATATATCATCCCATTTTTAA

mRNA sequence

ATGTTGCATGAGTTGGCCAACCAAAGCGTCAAGAAAATCACAATATATGGCAGTGCAGTCCAAGCCAATCTCTTTACCCTCAATTCAAACAAAGCCCTCTGGTTGCACCATTTTGAAAAGGACATGGCATCGACGGCACGAACCAGCTGTGTGAAATTAAGGCTTTTGATTGACTCGAAATCACAAAGAGTTCTTTTTGGTGAAGCTGACCAGAACTTGATCGACATTCTTTTCAATCTACTTTCCCACCCACATGGGGCTGTCGTCAGGCCATTGCAAAAGCAAAAAATTTTGGGCTCTTTGAAAAATCTGTATGAGAGTGTACAAGCTTTGAAAAACCCAACCAAATATTTGGCACTATTCATTGAAAAAACCAGAGTGAGTATATTGATGCAAGGGCTTCAGGCCGAGCCGATGACTCGAGAAAAGGGTGGGATGAGTTACATGGTGATGGACGACATGTCGTTGAAACCCATGTCGTTGATTCTTGTTTTTTTTTTTAATGATGGGTTGAAACATATATCATCCCATTTTTAA

Coding sequence (CDS)

ATGTTGCATGAGTTGGCCAACCAAAGCGTCAAGAAAATCACAATATATGGCAGTGCAGTCCAAGCCAATCTCTTTACCCTCAATTCAAACAAAGCCCTCTGGTTGCACCATTTTGAAAAGGACATGGCATCGACGGCACGAACCAGCTGTGTGAAATTAAGGCTTTTGATTGACTCGAAATCACAAAGAGTTCTTTTTGGTGAAGCTGACCAGAACTTGATCGACATTCTTTTCAATCTACTTTCCCACCCACATGGGGCTGTCGTCAGGCCATTGCAAAAGCAAAAAATTTTGGGCTCTTTGAAAAATCTGTATGAGAGTGTACAAGCTTTGAAAAACCCAACCAAATATTTGGCACTATTCATTGAAAAAACCAGAGTGAGTATATTGATGCAAGGGCTTCAGGCCGAGCCGATGACTCGAGAAAAGGGTGGGATGAGTTACATGGTGATGGACGACATGTCGTTGAAACCCATGTCGTTGATTCTTGTTTTTTTTTTTAATGATGGGTTGAAACATATATCATCCCATTTTTAA

Protein sequence

MLHELANQSVKKITIYGSAVQANLFTLNSNKALWLHHFEKDMASTARTSCVKLRLLIDSKSQRVLFGEADQNLIDILFNLLSHPHGAVVRPLQKQKILGSLKNLYESVQALKNPTKYLALFIEKTRVSILMQGLQAEPMTREKGGMSYMVMDDMSLKPMSLILVFFFNDGLKHISSHF
Homology
BLAST of Lag0040741 vs. NCBI nr
Match: KAE8670701.1 (Detected protein of unknown function [Hibiscus syriacus])

HSP 1 Score: 86.3 bits (212), Expect = 3.0e-13
Identity = 54/131 (41.22%), Postives = 77/131 (58.78%), Query Frame = 0

Query: 42  MASTART-SCVKLRLLIDSKSQRVLFGEADQNLIDILFNLLSHPHGAVVRPLQKQKILGS 101
           MAS A T + V L+LLIDSK QRVL+ EA ++ +D LFN+L  P G V R L KQ ++G 
Sbjct: 1   MASKASTAAAVSLKLLIDSKGQRVLYAEAGKDFVDFLFNILLMPVGTVTRLLTKQGMIGC 60

Query: 102 LKNLYESVQALKN----PTKYLALFIEKTRVSILMQGLQAEPMTREKGG-----MSYMVM 161
           L NLY+SV+ L +    PTK     ++ T  S L   +        +GG     ++Y ++
Sbjct: 61  LGNLYQSVENLGDAYIQPTKNRDTLLKPTYSSNLATNVSTASSAANEGGYVKGVVTYTIL 120

Query: 162 DDMSLKPMSLI 163
           DD+++ PMS I
Sbjct: 121 DDLTVTPMSTI 131

BLAST of Lag0040741 vs. NCBI nr
Match: XP_008461735.1 (PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF674 domain-containing protein [Cucumis melo var. makuwa] >TYJ97778.1 DUF674 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 3.9e-13
Identity = 43/63 (68.25%), Postives = 54/63 (85.71%), Query Frame = 0

Query: 51  VKLRLLIDSKSQRVLFGEADQNLIDILFNLLSHPHGAVVRPLQKQKILGSLKNLYESVQA 110
           V+L+LLIDS+ +RVLFGEAD+NLID LFNLLS P G V+R L+KQ ++GSL NLYESV+A
Sbjct: 8   VRLKLLIDSEQKRVLFGEADKNLIDFLFNLLSLPLGTVIRLLKKQGMVGSLANLYESVEA 67

Query: 111 LKN 114
           L +
Sbjct: 68  LND 70

BLAST of Lag0040741 vs. NCBI nr
Match: XP_022138964.1 (uncharacterized protein LOC111010013 [Momordica charantia])

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-12
Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = 0

Query: 51  VKLRLLIDSKSQRVLFGEADQNLIDILFNLLSHPHGAVVRPLQKQKILGSLKNLYESVQA 110
           V+L+LLIDSK QRVLFGEAD+N+ID LFNLLS P G V+R L+KQ ++G L NLYESV+ 
Sbjct: 6   VRLKLLIDSKEQRVLFGEADKNVIDFLFNLLSLPLGTVIRLLKKQGMVGCLGNLYESVET 65

Query: 111 LKN 114
           L +
Sbjct: 66  LND 68

BLAST of Lag0040741 vs. NCBI nr
Match: XP_017647963.1 (PREDICTED: uncharacterized protein LOC108488178 [Gossypium arboreum])

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-12
Identity = 53/138 (38.41%), Postives = 86/138 (62.32%), Query Frame = 0

Query: 46  ARTSCVKLRLLIDSKSQRVLFGEADQNLIDILFNLLSHPHGAVVRPLQKQKILGSLKNLY 105
           A T+ V+L+LLIDSKS+RVLF EA ++ +D LF++LS P G ++R L KQ ++  L NLY
Sbjct: 3   ATTTTVRLKLLIDSKSKRVLFAEAGKDFVDFLFSILSMPVGTIIRLLTKQGMVRCLGNLY 62

Query: 106 ESVQALKNPTKYLALFIEKTRVSILMQGLQAEPMTREKGG-----MSYMVMDDMSLKPMS 165
            S++ L +   Y+    +K     L++ ++++  +  +GG     ++YMVMDD+ + PMS
Sbjct: 63  GSIENLGD--TYMQSLAKK---DTLLKPMRSKGSSSVEGGYVKGVVTYMVMDDLVVSPMS 122

Query: 166 ------LILVFFFNDGLK 173
                 L+  F F +G+K
Sbjct: 123 KISSITLLNKFKFQEGIK 135

BLAST of Lag0040741 vs. NCBI nr
Match: XP_022139194.1 (uncharacterized protein LOC111010162 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-12
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 51  VKLRLLIDSKSQRVLFGEADQNLIDILFNLLSHPHGAVVRPLQKQKILGSLKNLYESVQA 110
           V+L+ LIDSK QRVLFGEADQN ID LFNLLS P G VVR L+KQ ++G L NLYESV+ 
Sbjct: 6   VRLKHLIDSKEQRVLFGEADQNFIDFLFNLLSLPLGTVVRQLKKQGMVGCLGNLYESVET 65

Query: 111 LKN 114
           L +
Sbjct: 66  LND 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8670701.13.0e-1341.22Detected protein of unknown function [Hibiscus syriacus][more]
XP_008461735.13.9e-1368.25PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF... [more]
XP_022138964.11.5e-1266.67uncharacterized protein LOC111010013 [Momordica charantia][more]
XP_017647963.11.9e-1238.41PREDICTED: uncharacterized protein LOC108488178 [Gossypium arboreum][more]
XP_022139194.11.9e-1268.25uncharacterized protein LOC111010162 [Momordica charantia][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007750Protein of unknown function DUF674PFAMPF05056DUF674coord: 50..113
e-value: 5.7E-15
score: 55.1
IPR007750Protein of unknown function DUF674PANTHERPTHR33103OS01G0153900 PROTEINcoord: 49..113
NoneNo IPR availablePANTHERPTHR33103:SF50OS01G0154200 PROTEINcoord: 49..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0040741.1Lag0040741.1mRNA