Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCGAGAGATGGGGCGATTTCCGGCGAGAGATGGGGCGATTTCCGGCGTGAGTTTAGGGACCCGGTCTGAAGGGTTATCCGCGGCGTGATTTTGGTGATTTTCTCTGGCTTAATCCATCCATCTGCGGGGATGGAGCGTCGGTTTATTTTTCAGTGGGATACGTTTTCAATACTGGAGATTATCTCCAGCGGATTTGTAGCTTTCTTGCTACTATTTCAGCGGATGCGATGGAACCTGGAAGACTCATCGATTTTTGTGGTCAATCAGGTCTGTGGGCATATCTGTCTGCTCTTTTTCTCTCCTTTGCTTGCTGACTCAATGGATCCTTCAAATTTGGTGGATGAGTGGGCGCGGTTGAGTCTTACTTCGGAGGAAGAAGAACTTTCGGTCACTCCTGACCGTGAAGCTGTAGATCGTTCCGGGGAATTGCTCGGATTTTGTTTGTTGGGAAAACTGCTCTGTCCCAGGCCTATCGGTGCGGAAGTTATGAGGAAAAACTTCAGGGCAGCGTGGAAGATTAATCAAGGATTACTAGTGGATCGTCTGGGCGTGAATCTGTTCATTTTCCGATTTGTAAATGAGATGGATCGAGTTAGGGTGGTTCGTCAGGGACCGTGGATTTTTGAGAAATATTTGTTGGTGGTAGTGCTCCCTATTCGTGGTTTGAAGCCCGCTGATCATCCATTTTCATTTGTATCCTTCTGGATTCATGTGTTTGATTTACCCCTGGATTGGTTTAATCAAACCATGGCGAAGCGCATTGGCAATGCAGTGGGAGTCTATGAGGAAGTCGATAGCCGTAACGGTTTCCTATTCTGGGGTACAAGTTTGCGCATCCGAGTTAAACTTGATTTAACTCGTCCTCTCCGGCGTGGCATTCGTATTTATCCTGATGGTCCTCTTAGCGGCCTGTGGGTTCCTTTCAGGTATGAGCGTTTACCGGGACTTTGTTCCTTTTGTGGAATTATTGGTCATATTACTCGTGATTGTGCCCAGTTCCTTAGATCGGACCAAGGTTTGGCTCCTCCCCCACAATATGGGGACTAG
mRNA sequence
ATGGGGCGAGAGATGGGGCGATTTCCGGCGAGAGATGGGGCGATTTCCGGCTGGGATACGTTTTCAATACTGGAGATTATCTCCAGCGGATTTGTAGCTTTCTTGCTACTATTTCAGCGGATGCGATGGAACCTGGAAGACTCATCGATTTTTGTGGTCAATCAGGTCTGTGGGCATATCTGTCTGCTCTTTTTCTCTCCTTTGCTTGCTGACTCAATGGATCCTTCAAATTTGGTGGATGAGTGGGCGCGGTTGAGTCTTACTTCGGAGGAAGAAGAACTTTCGGTCACTCCTGACCGTGAAGCTGTAGATCGTTCCGGGGAATTGCTCGGATTTTGTTTGTTGGGAAAACTGCTCTGTCCCAGGCCTATCGGTGCGGAAGTTATGAGGAAAAACTTCAGGGCAGCGTGGAAGATTAATCAAGGATTACTAGTGGATCGTCTGGGCGTGAATCTGTTCATTTTCCGATTTGTAAATGAGATGGATCGAGTTAGGGTGGTTCGTCAGGGACCGTGGATTTTTGAGAAATATTTGTTGGTGGTAGTGCTCCCTATTCGTGGTTTGAAGCCCGCTGATCATCCATTTTCATTTGTATCCTTCTGGATTCATGTGTTTGATTTACCCCTGGATTGGTTTAATCAAACCATGGCGAAGCGCATTGGCAATGCAGTGGGAGTCTATGAGGAAGTCGATAGCCGTAACGGTTTCCTATTCTGGGGTACAAGTTTGCGCATCCGAGTTAAACTTGATTTAACTCGTCCTCTCCGGCGTGGCATTCGTATTTATCCTGATGGTCCTCTTAGCGGCCTGTGGGTTCCTTTCAGGTATGAGCGTTTACCGGGACTTTGTTCCTTTTGTGGAATTATTGGTCATATTACTCGTGATTGTGCCCAGTTCCTTAGATCGGACCAAGGTTTGGCTCCTCCCCCACAATATGGGGACTAG
Coding sequence (CDS)
ATGGGGCGAGAGATGGGGCGATTTCCGGCGAGAGATGGGGCGATTTCCGGCTGGGATACGTTTTCAATACTGGAGATTATCTCCAGCGGATTTGTAGCTTTCTTGCTACTATTTCAGCGGATGCGATGGAACCTGGAAGACTCATCGATTTTTGTGGTCAATCAGGTCTGTGGGCATATCTGTCTGCTCTTTTTCTCTCCTTTGCTTGCTGACTCAATGGATCCTTCAAATTTGGTGGATGAGTGGGCGCGGTTGAGTCTTACTTCGGAGGAAGAAGAACTTTCGGTCACTCCTGACCGTGAAGCTGTAGATCGTTCCGGGGAATTGCTCGGATTTTGTTTGTTGGGAAAACTGCTCTGTCCCAGGCCTATCGGTGCGGAAGTTATGAGGAAAAACTTCAGGGCAGCGTGGAAGATTAATCAAGGATTACTAGTGGATCGTCTGGGCGTGAATCTGTTCATTTTCCGATTTGTAAATGAGATGGATCGAGTTAGGGTGGTTCGTCAGGGACCGTGGATTTTTGAGAAATATTTGTTGGTGGTAGTGCTCCCTATTCGTGGTTTGAAGCCCGCTGATCATCCATTTTCATTTGTATCCTTCTGGATTCATGTGTTTGATTTACCCCTGGATTGGTTTAATCAAACCATGGCGAAGCGCATTGGCAATGCAGTGGGAGTCTATGAGGAAGTCGATAGCCGTAACGGTTTCCTATTCTGGGGTACAAGTTTGCGCATCCGAGTTAAACTTGATTTAACTCGTCCTCTCCGGCGTGGCATTCGTATTTATCCTGATGGTCCTCTTAGCGGCCTGTGGGTTCCTTTCAGGTATGAGCGTTTACCGGGACTTTGTTCCTTTTGTGGAATTATTGGTCATATTACTCGTGATTGTGCCCAGTTCCTTAGATCGGACCAAGGTTTGGCTCCTCCCCCACAATATGGGGACTAG
Protein sequence
MGREMGRFPARDGAISGWDTFSILEIISSGFVAFLLLFQRMRWNLEDSSIFVVNQVCGHICLLFFSPLLADSMDPSNLVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKNFRAAWKINQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPADHPFSFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTRPLRRGIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDCAQFLRSDQGLAPPPQYGD
Homology
BLAST of Lag0040707 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 246.1 bits (627), Expect = 3.9e-61
Identity = 110/242 (45.45%), Postives = 158/242 (65.29%), Query Frame = 0
Query: 73 MDPSNLVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKN 132
MD NL+ +W + LTSEE+E+++ D +AV + + L + L+GKLL R I A+V+ +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 133 FRAAWKINQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPAD 192
AWK+ L V+ +G NLF+F F E D RV++ GPW F+K L+V+ P ++
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 193 HPFSFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLT 252
F+ V+FWIH+FDLP+ W N+TMA R+GNA+G + +VD WG SLRIRV +D+T
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 253 RPLRRGIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDC-AQFLRSDQGLAPPPQ 312
+PLRRGI+I DGP+ G W+P +YERLP C FCG+IGH + DC A++L + +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
Query: 313 YG 314
YG
Sbjct: 241 YG 242
BLAST of Lag0040707 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 219.5 bits (558), Expect = 4.0e-53
Identity = 96/226 (42.48%), Postives = 145/226 (64.16%), Query Frame = 0
Query: 73 MDPSNLVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKN 132
M SNL++EW LTSEE++++V D A++ +G+ L L+ KLL R I V++
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 133 FRAAWKIN-QGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPA 192
+ AWK++ + VD +G N+F+F F DR R++R GPW F++ L+++ P+ KP
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 193 DHPFSFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDL 252
D F VS W+H FDL L N+TMA R+GNA+G++E+V+S WG+ LR+RV+ D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 253 TRPLRRGIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDCA 298
+PL RGI++ DGP+ G W+P +YERLP CG + HI +DC+
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS 226
BLAST of Lag0040707 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 200.7 bits (509), Expect = 1.9e-47
Identity = 90/213 (42.25%), Postives = 133/213 (62.44%), Query Frame = 0
Query: 77 NLVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKNFRAA 136
+L++EW LTSEEEE ++ D A +G L L+GKL RPI VM+ R A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 137 WKI-NQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPADHPF 196
WK+ N V LG NLF+F F +DR ++ + GPW F++ L+++ P+ + P++ F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 197 SFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTRPL 256
+ + W+ FDLPL + MA R+GNA+G +EE D + WG++LR+RV LD+++PL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
Query: 257 RRGIRIYPDGPLSGLWVPFRYERLPGLCSFCGI 289
RRGI++ DGP+ G W+P +YERLP C CG+
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL 217
BLAST of Lag0040707 vs. NCBI nr
Match:
XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])
HSP 1 Score: 180.6 bits (457), Expect = 2.0e-41
Identity = 90/229 (39.30%), Postives = 137/229 (59.83%), Query Frame = 0
Query: 77 NLVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKNFRAA 136
+L+D LSLTSEE+ + V E+ CL+GKLL RP E M+ +
Sbjct: 4 SLLDLTRTLSLTSEEDAV-VRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSV 63
Query: 137 WKINQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPADHPFS 196
W+ +G+ V +G NLF+F F + +D+ RV+ GPW F+K+LL++ ++P+D +
Sbjct: 64 WQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLT 123
Query: 197 FVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTRPLR 256
V FW+HV +LPL N+ + + +GNAVG + ++D +G + WG ++RIRV LD+ +PLR
Sbjct: 124 RVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLR 183
Query: 257 RGIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDCAQFLRSDQG 306
RG+++ +WV F+YERLP C FCG +GH R+C L S G
Sbjct: 184 RGMKLALSS-AEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADG 230
BLAST of Lag0040707 vs. NCBI nr
Match:
XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])
HSP 1 Score: 177.9 bits (450), Expect = 1.3e-40
Identity = 88/223 (39.46%), Postives = 137/223 (61.43%), Query Frame = 0
Query: 77 NLVDEWARLSLTSEEEELSVTPDREAVDRSGELLG---FCLLGKLLCPRPIGAEVMRKNF 136
+LVD LSLTSEE+ + R D + ++G CL+GKLL RP E M+
Sbjct: 4 SLVDLTRTLSLTSEEDAVV----RIGGDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTL 63
Query: 137 RAAWKINQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPADH 196
+ W+ +G+ V +G NLF+F F + +D+ RV+ GPW F+K+LL++ ++P+D
Sbjct: 64 LSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDI 123
Query: 197 PFSFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTR 256
+ V FW+HV +LPL N+ + + +GNAVG + ++D +G + WG ++RIRV +D+ +
Sbjct: 124 QLTGVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVRK 183
Query: 257 PLRRGIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDC 297
PLRRG+++ +WV F+YERLP C FCG +GH R+C
Sbjct: 184 PLRRGMKLALSS-ADPIWVDFKYERLPIYCYFCGRLGHSDREC 221
BLAST of Lag0040707 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 1.9e-61
Identity = 110/242 (45.45%), Postives = 158/242 (65.29%), Query Frame = 0
Query: 73 MDPSNLVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKN 132
MD NL+ +W + LTSEE+E+++ D +AV + + L + L+GKLL R I A+V+ +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 133 FRAAWKINQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPAD 192
AWK+ L V+ +G NLF+F F E D RV++ GPW F+K L+V+ P ++
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 193 HPFSFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLT 252
F+ V+FWIH+FDLP+ W N+TMA R+GNA+G + +VD WG SLRIRV +D+T
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 253 RPLRRGIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDC-AQFLRSDQGLAPPPQ 312
+PLRRGI+I DGP+ G W+P +YERLP C FCG+IGH + DC A++L + +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
Query: 313 YG 314
YG
Sbjct: 241 YG 242
BLAST of Lag0040707 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 219.5 bits (558), Expect = 1.9e-53
Identity = 96/226 (42.48%), Postives = 145/226 (64.16%), Query Frame = 0
Query: 73 MDPSNLVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKN 132
M SNL++EW LTSEE++++V D A++ +G+ L L+ KLL R I V++
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 133 FRAAWKIN-QGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPA 192
+ AWK++ + VD +G N+F+F F DR R++R GPW F++ L+++ P+ KP
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 193 DHPFSFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDL 252
D F VS W+H FDL L N+TMA R+GNA+G++E+V+S WG+ LR+RV+ D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 253 TRPLRRGIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDCA 298
+PL RGI++ DGP+ G W+P +YERLP CG + HI +DC+
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS 226
BLAST of Lag0040707 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 9.2e-48
Identity = 90/213 (42.25%), Postives = 133/213 (62.44%), Query Frame = 0
Query: 77 NLVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKNFRAA 136
+L++EW LTSEEEE ++ D A +G L L+GKL RPI VM+ R A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 137 WKI-NQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPADHPF 196
WK+ N V LG NLF+F F +DR ++ + GPW F++ L+++ P+ + P++ F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 197 SFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTRPL 256
+ + W+ FDLPL + MA R+GNA+G +EE D + WG++LR+RV LD+++PL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
Query: 257 RRGIRIYPDGPLSGLWVPFRYERLPGLCSFCGI 289
RRGI++ DGP+ G W+P +YERLP C CG+
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL 217
BLAST of Lag0040707 vs. ExPASy TrEMBL
Match:
A0A2N9E6P9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2519 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 3.7e-41
Identity = 93/237 (39.24%), Postives = 130/237 (54.85%), Query Frame = 0
Query: 78 LVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKNFRAAW 137
LV+EW + SLT E+E T + +A+ S CLLGKL+ +P ++ W
Sbjct: 5 LVEEWRKFSLT-EDEGAGFTVEEDAMGNSLVQGSHCLLGKLITDKPFNKVALKSTMLRLW 64
Query: 138 KINQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPADHPFSF 197
+ +G +G NLFIF+F +E +R RV+ PW+F YLL + A FS
Sbjct: 65 GVARGTRAQIIGDNLFIFQFKDEFERTRVLNGLPWLFNNYLLALNEFNGSCPAAQIQFSK 124
Query: 198 VSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTRPLRR 257
FW+ + +PL++ + +R+GNA+G +VD G + WG LRIR+ LD T+P+ R
Sbjct: 125 CCFWVQLHGIPLNYMTKQTGQRLGNAMGKVVKVDVPEGGVAWGPYLRIRLCLDFTKPIPR 184
Query: 258 GIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDCAQFLRSD-QGLAPPPQYG 314
G R+ LWV F+YERLP LC FCG++GH RDC LRS QG QYG
Sbjct: 185 G-RLVTFQSSGQLWVSFKYERLPWLCFFCGLLGHSERDCVASLRSRCQGATISKQYG 239
BLAST of Lag0040707 vs. ExPASy TrEMBL
Match:
A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 1.0e-38
Identity = 92/231 (39.83%), Postives = 128/231 (55.41%), Query Frame = 0
Query: 78 LVDEWARLSLTSEEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKNFRAAW 137
L D W +LT EEE L V D VD + CL+GKLL RP+ EVMR W
Sbjct: 5 LTDLWENFNLT-EEENLEVAVDPRLVDETLAEGNNCLIGKLLSRRPVNVEVMRNVMHMVW 64
Query: 138 KINQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPADHPFSF 197
K+ GL V +G NLFIF+F +++++ RV +Q PW F K LLV+ D
Sbjct: 65 KLAGGLQVREIGENLFIFQFESDLEKERVYQQTPWNFNKALLVLKSYDAYDCVEDIKLDG 124
Query: 198 VSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTRPLRR 257
SFW DLPL + N+++ + IG + G EE+D+ + WG LR R +L++T+PLRR
Sbjct: 125 CSFWKQAHDLPLGFMNESIGRVIGESFGTVEEIDTCGDKIAWGKFLRFRARLNVTKPLRR 184
Query: 258 G-IRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGHITRDC--AQFLRSDQG 306
G I P+G + + FRYE+LP C CG + H+ +C A +R D+G
Sbjct: 185 GMILTAPNG--GKILISFRYEKLPDFCYVCGCLTHVENECEKAVVMRRDKG 232
BLAST of Lag0040707 vs. TAIR 10
Match:
AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 82.8 bits (203), Expect = 5.4e-16
Identity = 60/255 (23.53%), Postives = 110/255 (43.14%), Query Frame = 0
Query: 40 RMRWNLEDSSIFVVNQVCGHICLLFFSPLLADSMDPSNLVDEWARL--SLTSEEEELSVT 99
+ R+ + +S+ + + H L F+ PL S + D R + +++
Sbjct: 65 KFRFTIPESTNLISLKPPNHFPLRFYQPL-------SQMADNLRRAVQDINLGVDDIPFA 124
Query: 100 PDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKNFRAAWKINQGLLVDR-LGVNLFIFR 159
+ V+ + F L G+ + PR + + W GL+ R + F F
Sbjct: 125 LPEDIVNHAVAENRFILFGRPVMPRRQNLRSIVASMPRIWG-QSGLVHGRIMEGRQFHFI 184
Query: 160 FVNEMDRVRVVRQGPWIFEKYLLVVVLPIRGLKPADHPFSFVSFWIHVFDLPLDWFNQTM 219
F E V+R+GPW F ++++ ++ +P F F+ FW+ + +P + N+ +
Sbjct: 185 FTLEESLETVLRRGPWAFNDWMIL----LQRWEPQIPLFPFIPFWVQIRGIPFQFLNRGV 244
Query: 220 AKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTRPLRRGIRIYPDGPLSGLWVPFRY 279
+ IG A+G + D + R+ + D+T PLR ++ L + FRY
Sbjct: 245 VEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTL-LRFRY 304
Query: 280 ERLPGLCSFCGIIGH 292
ERL G C CG++ H
Sbjct: 305 ERLRGFCEVCGMLTH 306
BLAST of Lag0040707 vs. TAIR 10
Match:
AT5G36228.1 (nucleic acid binding;zinc ion binding )
HSP 1 Score: 79.7 bits (195), Expect = 4.6e-15
Identity = 49/209 (23.44%), Postives = 91/209 (43.54%), Query Frame = 0
Query: 114 LLGKLLCPRPIGAEVMRKNFRAAWKINQGLLVDRLGVNLFIFRFVNEMDRVRVVRQGPWI 173
LLG++L P+ E W + + L F RF +E+D + +R+ PW+
Sbjct: 39 LLGRILNPQTQSVERAILELPYQWGLGTQVHGRILDDRCFQVRFRSEIDLLNGLRRAPWV 98
Query: 174 FEKYLLVVVLPIRGLKPADHPFSFVSFWIHVFDLPLDWFNQTMAKRIGNAVGVYEEVDSR 233
F ++ + L P + +F+ W+H+ +PL + ++ + I + +G +D
Sbjct: 99 FNEWF--IALQRWEDFPTEDFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFN 158
Query: 234 NGFLFWGTSLRIRVKLDLTRPLR--RGIRIYPDGPLSGLWVPFRYERLPGLCSFCGIIGH 293
T +R++V++D T PLR R +R + F YE+L +C+ C + H
Sbjct: 159 EETTSQITFIRVKVRMDFTEPLRFFRRVRF---ASRERAMIGFEYEKLQRVCTNCCRVNH 218
Query: 294 ITRDCAQFLRSDQ------GLAPPPQYGD 315
C + ++ L P +Y D
Sbjct: 219 QVSHCPYVVHQEEMDNEPDVLVSPERYDD 242
BLAST of Lag0040707 vs. TAIR 10
Match:
AT2G01050.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 79.3 bits (194), Expect = 6.0e-15
Identity = 53/208 (25.48%), Postives = 92/208 (44.23%), Query Frame = 0
Query: 90 EEEELSVTPDREAVDRSGELLGFCLLGKLLCPRPIGAEVMRKNFRAAWKINQGLLVDRLG 149
E+EE +T E ++ L C++ K+L + I V+ + R WK + + V L
Sbjct: 57 EDEEPVITIGEEVLEAMNGLWKKCMIVKVLGSQ-IPISVLNRKLRELWKPSGVMTVMDLP 116
Query: 150 VNLFIFRFVNEMDRVRVVRQGPW-IFEKYLLVVVLPIRGLKPADHPFSFVSFWIHVFDLP 209
F+ RF E + + + GPW + YLLV R P W+ + ++P
Sbjct: 117 RQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSR-FDPLRDDIVTTPVWVRLSNIP 176
Query: 210 LDWFNQTMAKRIGNAVGVYEEVDSRNGFLFWGTSLRIRVKLDLTRPLRRGIRIYPDGPLS 269
+++++ + I +G +VD G R+ ++++L +PL+ + I D
Sbjct: 177 YNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYF- 236
Query: 270 GLWVPFRYERLPGLCSFCGIIGHITRDC 297
YE L +CS CGI GH+ C
Sbjct: 237 -----VAYEGLSKICSSCGIYGHLVHSC 256
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 3.9e-61 | 45.45 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_022132681.1 | 4.0e-53 | 42.48 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_022158377.1 | 1.9e-47 | 42.25 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
XP_028122006.1 | 2.0e-41 | 39.30 | uncharacterized protein LOC114319195 [Camellia sinensis] | [more] |
XP_028124075.1 | 1.3e-40 | 39.46 | uncharacterized protein LOC114321128 [Camellia sinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 1.9e-61 | 45.45 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1BSZ1 | 1.9e-53 | 42.48 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1DX30 | 9.2e-48 | 42.25 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A2N9E6P9 | 3.7e-41 | 39.24 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2519... | [more] |
A0A1R3GTB5 | 1.0e-38 | 39.83 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT3G31430.1 | 5.4e-16 | 23.53 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT5G36228.1 | 4.6e-15 | 23.44 | nucleic acid binding;zinc ion binding | [more] |
AT2G01050.1 | 6.0e-15 | 25.48 | zinc ion binding;nucleic acid binding | [more] |