Lag0040676 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0040676
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr13: 7154439 .. 7154834 (-)
RNA-Seq ExpressionLag0040676
SyntenyLag0040676
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATTATATTGCTTTCCACTTCAATCTGCGGCAAAGACTTGAGCTCTTCGACGACGAGGGTGGTTTTTCTGAGCTGCGAAATCCGACAGTTTAACGAATCGGTCGAGGCGGCGGAGGTGATGTTCGAGATGCCGAATTTCTTCGTCGTGAATTCTTAGTCGGTTCATGTTGGCCGGAGATTTTCGGCTCTGATGGCGGATGAGAATCTCGAGATGGGTAATCTGTACGTCATGTTTCTAATGAAGAGAAGGTGAATTCGGTGGTGTCGGTGGCAGATATGGGTGTGTTGTTCCTCGCCGCCGAGAGGGTGTCCGACGGGAAGAAGCGGCGGATCGTTGGTGGCGGGGAATCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGTTTAG

mRNA sequence

ATGGGAAATTATATTGCTTTCCACTTCAATCTGCGGCAAAGACTTGAGCTCTTCGACGACGAGGGTGAGAAGGTGAATTCGGTGGTGTCGGTGGCAGATATGGGTGTGTTGTTCCTCGCCGCCGAGAGGGTGTCCGACGGGAAGAAGCGGCGGATCGTTGGTGGCGGGGAATCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGTTTAG

Coding sequence (CDS)

ATGGGAAATTATATTGCTTTCCACTTCAATCTGCGGCAAAGACTTGAGCTCTTCGACGACGAGGGTGAGAAGGTGAATTCGGTGGTGTCGGTGGCAGATATGGGTGTGTTGTTCCTCGCCGCCGAGAGGGTGTCCGACGGGAAGAAGCGGCGGATCGTTGGTGGCGGGGAATCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGTTTAG

Protein sequence

MGNYIAFHFNLRQRLELFDDEGEKVNSVVSVADMGVLFLAAERVSDGKKRRIVGGGESTVCVWPEVETEV
Homology
[Close]
BLAST of Lag0040676 vs. NCBI nr
Match: XP_011656216.1 (uncharacterized protein LOC105435675 [Cucumis sativus] >KGN51040.1 hypothetical protein Csa_008425 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-14
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0 

Query: 24  KVNSVVSVADMGVLFLAAERVSDGKKRRIVGGGESTVCVWPEVETE 70
           KVNSVVSVADMG LFLAAERVS GKKRRIVGGG+STVCVWPEVETE
Sbjct: 87  KVNSVVSVADMGALFLAAERVSGGKKRRIVGGGDSTVCVWPEVETE 132

[Close]
BLAST of Lag0040676 vs. NCBI nr
Match: KAA0062355.1 (uncharacterized protein E6C27_scaffold154G001210 [Cucumis melo var. makuwa] >TYK26622.1 uncharacterized protein E5676_scaffold313G002630 [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 5.2e-14
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 23  EKVNSVVSVADMGVLFLAAERVSDGKKRRIVGGGESTVCVWPEVETE 70
           +KVNSVVSVADMG LFLAAERVS G KRRI+GGG+STVCVWPEVETE
Sbjct: 86  KKVNSVVSVADMGALFLAAERVSGGNKRRIIGGGDSTVCVWPEVETE 132

[Close]
BLAST of Lag0040676 vs. NCBI nr
Match: XP_038876498.1 (uncharacterized protein LOC120068930 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 2.0e-13
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 23  EKVNSVVSVADMGVLFLAAERVSDGKKRRIVGGGESTVCVWPEVETE 70
           +KVNSVVSVADMG LFLAAERVS GKKRRI+GGGES VCVWPEVE +
Sbjct: 86  KKVNSVVSVADMGALFLAAERVSGGKKRRIIGGGESNVCVWPEVEAD 132

[Close]
BLAST of Lag0040676 vs. NCBI nr
Match: XP_008460510.1 (PREDICTED: uncharacterized protein LOC103499309 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 4.4e-13
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 23  EKVNSVVSVADMGVLFLAAERVSDGKKRRIVGGGESTVCVWPEVETE 70
           +KVNSVVSVADMG LFLAAERVS   KRRI+GGG+STVCVWPEVETE
Sbjct: 86  KKVNSVVSVADMGALFLAAERVSGRNKRRIIGGGDSTVCVWPEVETE 132

[Close]
BLAST of Lag0040676 vs. NCBI nr
Match: XP_022959522.1 (uncharacterized protein LOC111460504 [Cucurbita moschata] >KAG6602038.1 hypothetical protein SDJN03_07271, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032732.1 hypothetical protein SDJN02_06782, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.8 bits (190), Expect = 4.1e-11
Identity = 39/47 (82.98%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 23  EKVNSVVSVADMGVLFLAAERVSDGKKRRIVGGGESTVCVWPEVETE 70
           +KVNSVVSV DMGVL LAAERVSD KKRRIVGGGES VCV P+VE E
Sbjct: 86  KKVNSVVSVTDMGVLLLAAERVSDRKKRRIVGGGESNVCVCPKVEAE 132

The following BLAST results are available for this feature:
BLAST of Lag0040676 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656216.11.4e-1493.48uncharacterized protein LOC105435675 [Cucumis sativus] >KGN51040.1 hypothetical ... [more]
KAA0062355.15.2e-1487.23uncharacterized protein E6C27_scaffold154G001210 [Cucumis melo var. makuwa] >TYK... [more]
XP_038876498.12.0e-1385.11uncharacterized protein LOC120068930 [Benincasa hispida][more]
XP_008460510.14.4e-1385.11PREDICTED: uncharacterized protein LOC103499309 [Cucumis melo][more]
XP_022959522.14.1e-1182.98uncharacterized protein LOC111460504 [Cucurbita moschata] >KAG6602038.1 hypothet... [more]
BLAST of Lag0040676 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0040676.1Lag0040676.1mRNA