Lag0040661 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040661
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	serine/arginine-rich splicing factor RS2Z32-like isoform X1
Location	chr13: 7036964 .. 7039111 (+)
RNA-Seq Expression	Lag0040661
Synteny	Lag0040661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGCTATGACGATCGATACGGTGGTACTCGGCTCTACGTTGGGCGCCTGTCTTCACGGACGAGGTCCCGTGATCTGGACGACCTGTTCAGCCGCTATGGAAGGTATGCAAATTCTTGTACTGACGTTAATTGGATGAATTCGAAATCTTTACGCGTGTTCAGTTGTGTCCTGTCTTTACTTCTATTGTCCCGGTTATGAAATTGCTAACATCCTTGTCAGAGTAAATTATTTATTGATACTTCTCTCTAGACCTCTTGAGGTATTTGCCAAGCCCTTCTCTGGGTGCTCGACTGTAAATGTGTATTTTGATATATCCATGAAAGTGTGGAATTGTTGATGGGTTTGTGTGGTTTAACTTGAGTGATCTTGTTGAAGGTTTCTTGGCTTATGCCAAACCTGGAGGTCTATGGTGAGAGGGTTCCCTTGGTGGATTTGGCCGAGTCTTTCTATTATGTTATTGCCTGTTTTTATGGAAATGCCAAGAATCTCAGAATGGTGTTTAGTTCATCTATGAGGGGCGAGGTGTCAACCCTTTGATACTTGTATCAAATGATGGCCTTACCTGTTTCTGGACCAATTTGCGCAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGTATGTATTTTCCTCCCTCTCTTTCATACTATTTTTTTTTTCAGGCTATTCTTAAAAGAAAGTGATGCTACTACTTGATGGTGCATGTTAATTTTTGCAAGCGTGATCTTTTTTCTTGGTCTATCTGCTTAAACATCTGATAACAGGAGTTTAGTGATCCCCGAGATGCTGATGATGCAAGATATAGTTTAAATGGGAGGGATGTTCATGGAAGTCGAATCATTGTTGAAATAGCTAAAGGGGTATGTTCCATGATCTTGATAAACCTTTCATTAATTGTTTAATTTGTTTCAAACAGGTTCCCTCTGTTTCCCAGGCTTGTTATCAATTTTATCCTTTTGAGTAGTTTACCACTTTTCCTGTCTTTAGGGGGTTCTGATATTTTATGCTCTTTTGAAATATTTATTTTGATTCTTGGAAAATATCCTTCTACATGTTCATGTACAATTTCAGTCTTTTTATAATCACATTTGTTCATTATGAAGGCTATGTGTAGTTTTATTGGCTTGCAGGGGTAAGTTTATAATGTTTATGGCTTTTATATTGGTTCTGTTAACTATTGTCTGAATGTGATGATATTATCCAATTATGATTTAGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTTGGCCGAGGCCCTCCTGGAACTGGGCGGTGTTTTAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAGTGTTATCGATGTGGGGAACGAGGTCACATTGAGAAGAACTGCCAGAACAGTCCTAAGAAATTAAAGTATGTTTTATTTTCCATAGTTTTCTTTTTTCGTTTTATTTTTTTTGGGGTTGATCATTGAGAGAAAAAACTCTATGGCACAGGCGTGGAAGTTACTCACGTTCACCTAGCCCTCGGCGTGGTAGAAGTCGAAGTCGCAGTTACAGCAGAGGTCGTAGCTACAGGTTTGTTGCAACTGAATCATTTTCATTCATTCTGTTATCGAAGTTTCCATCTCGAGTCACATTGCCCTACGTGTCTTCATGAGTTTGTTCAATTATTCATGTCTGAACTTTATGAATTTAACTTCCTGAGCGTTTGTGTTTTGTGTCCACAGTCGATCTAGATCACCTGTAAAAAGAGAAAGAAGTCTTGAACGATCAGAAAAAAGATCAAGGAGCCCAAGGGGCAGGCCGAGCCCAAAGAGGCATAGTTTGTCGCCTCCTCCTTCAAAAGCTATGAAACGTAGCCGGACTCCTGATGAGAGGAGTCCAGAAGAAGCAAGACGCAGCCCGTCCCCTGGAAATCGTGACAGTCCTAGGGGAAGAAGCAGAAGTCCTCCAAGAGGAAGGAGCAGAAGTCCAATGGACGAAGCTGAGGACTTCAACGGTGGTGGAAGTAGGAATTACCGGAGGGAAGAAAACGGCTACAGTCGTAGCCCCAGTCCGTTGCCCAGAGAAGAAAGGAGTCCTGTAAACGATGAAGATAACAACGGTTCTCCGAGGGGCGGTAGCGAATCTGCGTAA

mRNA sequence

ATGCCTCGCTATGACGATCGATACGGTGGTACTCGGCTCTACGTTGGGCGCCTGTCTTCACGGACGAGGTCCCGTGATCTGGACGACCTGTTCAGCCGCTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGAGATGCTGATGATGCAAGATATAGTTTAAATGGGAGGGATGTTCATGGAAGTCGAATCATTGTTGAAATAGCTAAAGGGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTTGGCCGAGGCCCTCCTGGAACTGGGCGGTGTTTTAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAGTGTTATCGATGTGGGGAACGAGGTCACATTGAGAAGAACTGCCAGAACAGTCCTAAGAAATTAAAGCGTGGAAGTTACTCACGTTCACCTAGCCCTCGGCGTGGTAGAAGTCGAAGTCGCAGTTACAGCAGAGGTCGTAGCTACAGTCGATCTAGATCACCTGTAAAAAGAGAAAGAAGTCTTGAACGATCAGAAAAAAGATCAAGGAGCCCAAGGGGCAGGCCGAGCCCAAAGAGGCATAGTTTGTCGCCTCCTCCTTCAAAAGCTATGAAACGTAGCCGGACTCCTGATGAGAGGAGTCCAGAAGAAGCAAGACGCAGCCCGTCCCCTGGAAATCGTGACAGTCCTAGGGGAAGAAGCAGAAGTCCTCCAAGAGGAAGGAGCAGAAGTCCAATGGACGAAGCTGAGGACTTCAACGGTGGTGGAAGTAGGAATTACCGGAGGGAAGAAAACGGCTACAGTCGTAGCCCCAGTCCGTTGCCCAGAGAAGAAAGGAGTCCTGTAAACGATGAAGATAACAACGGTTCTCCGAGGGGCGGTAGCGAATCTGCGTAA

Coding sequence (CDS)

ATGCCTCGCTATGACGATCGATACGGTGGTACTCGGCTCTACGTTGGGCGCCTGTCTTCACGGACGAGGTCCCGTGATCTGGACGACCTGTTCAGCCGCTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGAGATGCTGATGATGCAAGATATAGTTTAAATGGGAGGGATGTTCATGGAAGTCGAATCATTGTTGAAATAGCTAAAGGGGTACCCCGTGGTCCTGGTGGATCTCGTGAATATCTTGGCCGAGGCCCTCCTGGAACTGGGCGGTGTTTTAATTGTGGGATTGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAGTGTTATCGATGTGGGGAACGAGGTCACATTGAGAAGAACTGCCAGAACAGTCCTAAGAAATTAAAGCGTGGAAGTTACTCACGTTCACCTAGCCCTCGGCGTGGTAGAAGTCGAAGTCGCAGTTACAGCAGAGGTCGTAGCTACAGTCGATCTAGATCACCTGTAAAAAGAGAAAGAAGTCTTGAACGATCAGAAAAAAGATCAAGGAGCCCAAGGGGCAGGCCGAGCCCAAAGAGGCATAGTTTGTCGCCTCCTCCTTCAAAAGCTATGAAACGTAGCCGGACTCCTGATGAGAGGAGTCCAGAAGAAGCAAGACGCAGCCCGTCCCCTGGAAATCGTGACAGTCCTAGGGGAAGAAGCAGAAGTCCTCCAAGAGGAAGGAGCAGAAGTCCAATGGACGAAGCTGAGGACTTCAACGGTGGTGGAAGTAGGAATTACCGGAGGGAAGAAAACGGCTACAGTCGTAGCCCCAGTCCGTTGCCCAGAGAAGAAAGGAGTCCTGTAAACGATGAAGATAACAACGGTTCTCCGAGGGGCGGTAGCGAATCTGCGTAA

Protein sequence

MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPSPGNRDSPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESA

Homology

[Close]

BLAST of Lag0040661 vs. NCBI nr
Match: XP_038892927.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida] >XP_038892928.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida])

HSP 1 Score: 567.8 bits (1462), Expect = 5.8e-158
Identity = 298/308 (96.75%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPSPGNRDSP 240
           RERSLERS+KRSRSPRGR SPKRHSLSPPP K MKRS TPDERSPEEARRS SPGNRDSP
Sbjct: 181 RERSLERSDKRSRSPRGRSSPKRHSLSPPP-KTMKRSPTPDERSPEEARRSLSPGNRDSP 240

Query: 241 RGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGS 300
           RGRSRS PRGRSRSPMDE EDF+GGGSRNYRREENGYSRSPSPLPREERSPVNDED NGS
Sbjct: 241 RGRSRS-PRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSPLPREERSPVNDEDQNGS 300

Query: 301 PRGGSESA 309
           PRGGSESA
Sbjct: 301 PRGGSESA 306

[Close]

BLAST of Lag0040661 vs. NCBI nr
Match: XP_008445806.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo] >XP_008445807.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo])

HSP 1 Score: 562.8 bits (1449), Expect = 1.9e-156
Identity = 300/311 (96.46%), Postives = 302/311 (97.11%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEE-ARRSPSPGNRD- 240
           R+RSLERS+KRSRSPRGR SPKRHSLSPPP KAMKRS TPDERSPEE ARRS SPGNRD 
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 -SPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 300
            SPRGRSRS PRGRSRSPMDE EDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN
Sbjct: 241 RSPRGRSRS-PRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 300

Query: 301 NGSPRGGSESA 309
           NGSPRGGSESA
Sbjct: 301 NGSPRGGSESA 309

[Close]

BLAST of Lag0040661 vs. NCBI nr
Match: XP_022139066.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia] >XP_022139067.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia] >XP_022139068.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia])

HSP 1 Score: 562.8 bits (1449), Expect = 1.9e-156
Identity = 301/330 (91.21%), Postives = 305/330 (92.42%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR--GRSRSRSYSRGRSYSRSRSP 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR  GRSRSRSYSRGRSYSRSRSP
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGGGRSRSRSYSRGRSYSRSRSP 180

Query: 181 VKRERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPSPGNRD 240
           +KRERSLERSEKRSRSPRGRPSPKRHSLSPPP KAMKRS TPDERSPEEARRSPSPGNRD
Sbjct: 181 IKRERSLERSEKRSRSPRGRPSPKRHSLSPPP-KAMKRSPTPDERSPEEARRSPSPGNRD 240

Query: 241 SPRGRSRSP--------------------PRGRSRSPMDEAEDFNGGGSRNYRREENGYS 300
           SPRGRSRSP                    PRGRSRSPMDEAEDF+ GGSRNYRREENGYS
Sbjct: 241 SPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDFD-GGSRNYRREENGYS 300

Query: 301 RSPSPLPREERSPVNDEDNNGSPRGGSESA 309
           RSPSPLPREERSP+NDEDNNG+PRGGSESA
Sbjct: 301 RSPSPLPREERSPINDEDNNGTPRGGSESA 328

[Close]

BLAST of Lag0040661 vs. NCBI nr
Match: XP_022942535.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata] >XP_022942536.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 561.6 bits (1446), Expect = 4.2e-156
Identity = 301/326 (92.33%), Postives = 303/326 (92.94%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGG---SREYLGRGPPGTGRCFNCGIDGHWARDCK 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGG   SREYLGRGPPGTGRCFNCGIDGHWARDCK
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRESREYLGRGPPGTGRCFNCGIDGHWARDCK 120

Query: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180
           AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS
Sbjct: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180

Query: 181 PVKRERSLERSEKRSRSPR-GRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPSPGN 240
           PVKR+RSLERSEKRSRSPR GR SPKRHSLSPPPSKAMKRS TPD RSPEEARRSPSPGN
Sbjct: 181 PVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKRSPTPDVRSPEEARRSPSPGN 240

Query: 241 RDSPRGRSRS--------------PPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPS 300
           RDSPRGRSRS               PRGRSRSPMDEAEDFNGGGSRNYR+EENGYSRSPS
Sbjct: 241 RDSPRGRSRSRSRSPRGRSRSRSRSPRGRSRSPMDEAEDFNGGGSRNYRKEENGYSRSPS 300

Query: 301 PLPREERSPVNDEDNNGSPRGGSESA 309
           PLPREERSPVNDED NGSPRGGSESA
Sbjct: 301 PLPREERSPVNDEDANGSPRGGSESA 326

[Close]

BLAST of Lag0040661 vs. NCBI nr
Match: XP_004143594.1 (serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004143595.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_031741874.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >KAE8647969.1 hypothetical protein Csa_000224 [Cucumis sativus])

HSP 1 Score: 561.2 bits (1445), Expect = 5.4e-156
Identity = 299/310 (96.45%), Postives = 301/310 (97.10%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEE-ARRSPSPGNRD- 240
           R+RSLERS+KRSRSPRGR SPKRHSLSPPP KAMKRS TPDERSPEE ARRS SPGNRD 
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 -SPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 300
            SPRGRSRS PRGRSRSPMDE EDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN
Sbjct: 241 RSPRGRSRS-PRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 300

Query: 301 NGSPRGGSES 308
           NGSPRGGSES
Sbjct: 301 NGSPRGGSES 308

[Close]

BLAST of Lag0040661 vs. ExPASy Swiss-Prot
Match: Q9FYB7 (Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=RS2Z32 PE=1 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.6e-78
Identity = 176/282 (62.41%), Postives = 204/282 (72.34%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP----SPRRGR--SRSRSYSRGR 180
           DWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP    SPRR R  SRSRSYSRGR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR 180

Query: 181 SYSRSRSPVKRERSLE------RSEKRSRSPRGRP---SPKRHSLSPPPSKAMKRSRTPD 240
           SYSRSRSPV+RE+S+E      ++ +RS SP+GR    SP R  +   P +      +P 
Sbjct: 181 SYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVIDASPKRGSDYDGSPK 240

Query: 241 ERSPEEARRSPSPGNRDSPRGRSRSPPRGRSRSPMDEAEDFN 264
           E        SP  G  +SP G +     G+ RSP+D+  + +
Sbjct: 241 ENGNGRNSASPIVGGGESPVGLN-----GQDRSPIDDEAELS 274

[Close]

BLAST of Lag0040661 vs. ExPASy Swiss-Prot
Match: Q8VYA5 (Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=RS2Z33 PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.7e-78
Identity = 191/323 (59.13%), Postives = 219/323 (67.80%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRSRSYSRGRSYSR 180
           DWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS SRS SR RSYSR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSR 180

Query: 181 SRSPV-KRERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPS 240
           SRSPV +RERS+   E+RSRSP+                     R  D  SP    RSP 
Sbjct: 181 SRSPVRRRERSV---EERSRSPK---------------------RMDDSLSPRARDRSPV 240

Query: 241 PGNRDSPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPL-------PR 300
             +  SP+    SPP    +   +   D +GG       ++NG +   SP+        +
Sbjct: 241 LDDEGSPKIIDGSPPPS-PKLQKEVGSDRDGGSP-----QDNGRNSVVSPVVGAGGDSSK 289

Query: 301 EERSPVND--EDNNGSPRGGSES 308
           E+RSPV+D  E N  SPR GSES
Sbjct: 301 EDRSPVDDDYEPNRTSPR-GSES 289

[Close]

BLAST of Lag0040661 vs. ExPASy Swiss-Prot
Match: Q3T106 (Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.9e-21
Identity = 102/245 (41.63%), Postives = 129/245 (52.65%), Query Frame = 0


Query: 1   MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 60
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 61  ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 120
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ CG  GH+A DC
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 120

Query: 121 KAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSR 180
                + +  R   R H     +  +  +   RG  SRS SPRR RS S   SR  S  R
Sbjct: 121 HRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVSLRRSRSASLRR 180

Query: 181 SRS-PVKRERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPS 239
           SRS  +K  RS  RS  RSRS     S +  S SP P    KRSR+P   SP   RRS S
Sbjct: 181 SRSGSIKGSRSRSRSRSRSRSLSRPRSSRSKSRSPSP----KRSRSP-SGSP---RRSAS 235

[Close]

BLAST of Lag0040661 vs. ExPASy Swiss-Prot
Match: Q16629 (Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.7e-20
Identity = 108/267 (40.45%), Postives = 138/267 (51.69%), Query Frame = 0


Query: 1   MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 60
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 61  ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 120
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R P               AR  
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP---------------AR-- 120

Query: 121 KAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGR--SRSRSYSRGRSYSR 180
           +  D  ++CY CGE+GH   +C    ++ +  S SRS S  RGR  SRSRS SRGR  SR
Sbjct: 121 RPFDPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRR-SR 180

Query: 181 SRSPVKRERSLERSEKRS----RSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARR 240
           S SP +R RS+     RS    RS  G     R+  SP  S++  RS     RS     R
Sbjct: 181 SASP-RRSRSISLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRS-ISRPRSSRSKSR 238

Query: 241 SPSPGNRDSPRGRSRSPPRGRSRSPMD 258
           SPSP    SP G   SP R  S   MD
Sbjct: 241 SPSPKRSRSPSG---SPRRSASPERMD 238

[Close]

BLAST of Lag0040661 vs. ExPASy Swiss-Prot
Match: Q23121 (Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=6239 GN=rsp-1 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.9e-19
Identity = 108/312 (34.62%), Postives = 142/312 (45.51%), Query Frame = 0


Query: 12  RLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHG 71
           R+Y+GRL+SR   +D++  F  YG++RDV +K  + FVEF D RDA+DA + LNG+++ G
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63

Query: 72  SRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARD---------------- 131
            R+I++ +K  PRG GG R   G G  G  R  +    G   RD                
Sbjct: 64  ERVILDYSK--PRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESRY 123

Query: 132 ------------------CKAGDWKNKCYRCG-----ERGHIEKN----CQNSPKKLKR- 191
                                 D K++  R G        H   N    C  +P  LKR 
Sbjct: 124 GRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRC 183

Query: 192 -----------GSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK-RERSLERSEKRSRSP 251
                               + GRSRSRS SR RS SRSR   + R RS  RS+ RSRSP
Sbjct: 184 IEKCDGMDLNGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSP 243

Query: 252 --RGRPSPKRHSLSPPPSKAM--KRSRTPDERSPEEARRSPSPGNRDSPRGRSRSPPRGR 264
             R R   K  S S   S++   ++SR+P  RSP++  RSPSP           SP R R
Sbjct: 244 PKRSRRESKSKSRSRSRSRSADNRKSRSP-SRSPKKVDRSPSPPRGSRSPSEKGSPRRSR 303

[Close]

BLAST of Lag0040661 vs. ExPASy TrEMBL
Match: A0A1S3BDJ7 (serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 9.1e-157
Identity = 300/311 (96.46%), Postives = 302/311 (97.11%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEE-ARRSPSPGNRD- 240
           R+RSLERS+KRSRSPRGR SPKRHSLSPPP KAMKRS TPDERSPEE ARRS SPGNRD 
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 240

Query: 241 -SPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 300
            SPRGRSRS PRGRSRSPMDE EDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN
Sbjct: 241 RSPRGRSRS-PRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 300

Query: 301 NGSPRGGSESA 309
           NGSPRGGSESA
Sbjct: 301 NGSPRGGSESA 309

[Close]

BLAST of Lag0040661 vs. ExPASy TrEMBL
Match: A0A6J1CET7 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010076 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 9.1e-157
Identity = 301/330 (91.21%), Postives = 305/330 (92.42%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR--GRSRSRSYSRGRSYSRSRSP 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR  GRSRSRSYSRGRSYSRSRSP
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGGGRSRSRSYSRGRSYSRSRSP 180

Query: 181 VKRERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPSPGNRD 240
           +KRERSLERSEKRSRSPRGRPSPKRHSLSPPP KAMKRS TPDERSPEEARRSPSPGNRD
Sbjct: 181 IKRERSLERSEKRSRSPRGRPSPKRHSLSPPP-KAMKRSPTPDERSPEEARRSPSPGNRD 240

Query: 241 SPRGRSRSP--------------------PRGRSRSPMDEAEDFNGGGSRNYRREENGYS 300
           SPRGRSRSP                    PRGRSRSPMDEAEDF+ GGSRNYRREENGYS
Sbjct: 241 SPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDFD-GGSRNYRREENGYS 300

Query: 301 RSPSPLPREERSPVNDEDNNGSPRGGSESA 309
           RSPSPLPREERSP+NDEDNNG+PRGGSESA
Sbjct: 301 RSPSPLPREERSPINDEDNNGTPRGGSESA 328

[Close]

BLAST of Lag0040661 vs. ExPASy TrEMBL
Match: A0A6J1FWH1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447542 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.0e-156
Identity = 301/326 (92.33%), Postives = 303/326 (92.94%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGG---SREYLGRGPPGTGRCFNCGIDGHWARDCK 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGG   SREYLGRGPPGTGRCFNCGIDGHWARDCK
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRESREYLGRGPPGTGRCFNCGIDGHWARDCK 120

Query: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180
           AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS
Sbjct: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180

Query: 181 PVKRERSLERSEKRSRSPR-GRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPSPGN 240
           PVKR+RSLERSEKRSRSPR GR SPKRHSLSPPPSKAMKRS TPD RSPEEARRSPSPGN
Sbjct: 181 PVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKRSPTPDVRSPEEARRSPSPGN 240

Query: 241 RDSPRGRSRS--------------PPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPS 300
           RDSPRGRSRS               PRGRSRSPMDEAEDFNGGGSRNYR+EENGYSRSPS
Sbjct: 241 RDSPRGRSRSRSRSPRGRSRSRSRSPRGRSRSPMDEAEDFNGGGSRNYRKEENGYSRSPS 300

Query: 301 PLPREERSPVNDEDNNGSPRGGSESA 309
           PLPREERSPVNDED NGSPRGGSESA
Sbjct: 301 PLPREERSPVNDEDANGSPRGGSESA 326

[Close]

BLAST of Lag0040661 vs. ExPASy TrEMBL
Match: A0A0A0KS31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.6e-156
Identity = 299/310 (96.45%), Postives = 301/310 (97.10%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 182

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 183 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 242

Query: 181 RERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEE-ARRSPSPGNRD- 240
           R+RSLERS+KRSRSPRGR SPKRHSLSPPP KAMKRS TPDERSPEE ARRS SPGNRD 
Sbjct: 243 RDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKRSPTPDERSPEEDARRSLSPGNRDS 302

Query: 241 -SPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 300
            SPRGRSRS PRGRSRSPMDE EDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN
Sbjct: 303 RSPRGRSRS-PRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 362

Query: 301 NGSPRGGSES 308
           NGSPRGGSES
Sbjct: 363 NGSPRGGSES 370

[Close]

BLAST of Lag0040661 vs. ExPASy TrEMBL
Match: A0A6J1JVG4 (serine/arginine-rich splicing factor RS2Z32-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489058 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.6e-153
Identity = 295/317 (93.06%), Postives = 299/317 (94.32%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGG---SREYLGRGPPGTGRCFNCGIDGHWARDCK 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGG   SREYLGRGPPGTGRCFNCGIDGHWARDCK
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRESREYLGRGPPGTGRCFNCGIDGHWARDCK 120

Query: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180
           AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS
Sbjct: 121 AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS 180

Query: 181 PVKRERSLERSEKRSRSPR-GRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPSPGN 240
           PVKR+RSLERSEKRSRSPR GR SPKRHSLSPPPSKAMKRS TPD RSPEEARRS SP N
Sbjct: 181 PVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKRSPTPDVRSPEEARRSLSPEN 240

Query: 241 RDSPRGRSR-----SPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPLPREERSP 300
           RDSPRGRSR       PRGRSRSPMDEAEDFNGGGSRNYR+EENGYSRSPSPLPREERSP
Sbjct: 241 RDSPRGRSRRRSRSRSPRGRSRSPMDEAEDFNGGGSRNYRKEENGYSRSPSPLPREERSP 300

Query: 301 VNDEDNNGSPRGGSESA 309
           VND++ NGSPRGGS SA
Sbjct: 301 VNDDEANGSPRGGSGSA 317

[Close]

BLAST of Lag0040661 vs. TAIR 10
Match: AT3G53500.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 293.1 bits (749), Expect = 2.6e-79
Identity = 176/282 (62.41%), Postives = 204/282 (72.34%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP----SPRRGR--SRSRSYSRGR 180
           DWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP    SPRR R  SRSRSYSRGR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR 180

Query: 181 SYSRSRSPVKRERSLE------RSEKRSRSPRGRP---SPKRHSLSPPPSKAMKRSRTPD 240
           SYSRSRSPV+RE+S+E      ++ +RS SP+GR    SP R  +   P +      +P 
Sbjct: 181 SYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVIDASPKRGSDYDGSPK 240

Query: 241 ERSPEEARRSPSPGNRDSPRGRSRSPPRGRSRSPMDEAEDFN 264
           E        SP  G  +SP G +     G+ RSP+D+  + +
Sbjct: 241 ENGNGRNSASPIVGGGESPVGLN-----GQDRSPIDDEAELS 274

[Close]

BLAST of Lag0040661 vs. TAIR 10
Match: AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 292.7 bits (748), Expect = 3.4e-79
Identity = 191/323 (59.13%), Postives = 219/323 (67.80%), Query Frame = 0


Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRSRSYSRGRSYSR 180
           DWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS SRS SR RSYSR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSR 180

Query: 181 SRSPV-KRERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDERSPEEARRSPS 240
           SRSPV +RERS+   E+RSRSP+                     R  D  SP    RSP 
Sbjct: 181 SRSPVRRRERSV---EERSRSPK---------------------RMDDSLSPRARDRSPV 240

Query: 241 PGNRDSPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPSPL-------PR 300
             +  SP+    SPP    +   +   D +GG       ++NG +   SP+        +
Sbjct: 241 LDDEGSPKIIDGSPPPS-PKLQKEVGSDRDGGSP-----QDNGRNSVVSPVVGAGGDSSK 289

Query: 301 EERSPVND--EDNNGSPRGGSES 308
           E+RSPV+D  E N  SPR GSES
Sbjct: 301 EDRSPVDDDYEPNRTSPR-GSES 289

[Close]

BLAST of Lag0040661 vs. TAIR 10
Match: AT2G37340.3 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 218.4 bits (555), Expect = 8.1e-57
Identity = 154/282 (54.61%), Postives = 180/282 (63.83%), Query Frame = 0


Query: 42  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 101
           MKRDYAFVEF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG 
Sbjct: 1   MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGA 60

Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----S 161
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    S
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRS 120

Query: 162 PRRGRSRSRSYSRGRSYSRSRSPV-KRERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAM 221
           PRR RS SRS SR RSYSRSRSPV +RERS+   E+RSRSP+                  
Sbjct: 121 PRRRRSPSRSLSRSRSYSRSRSPVRRRERSV---EERSRSPK------------------ 180

Query: 222 KRSRTPDERSPEEARRSPSPGNRDSPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREE 281
              R  D  SP    RSP   +  SP+    SPP    +   +   D +GG       ++
Sbjct: 181 ---RMDDSLSPRARDRSPVLDDEGSPKIIDGSPPPS-PKLQKEVGSDRDGGSP-----QD 240

Query: 282 NGYSRSPSPL-------PREERSPVND--EDNNGSPRGGSES 308
           NG +   SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 241 NGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 248

[Close]

BLAST of Lag0040661 vs. TAIR 10
Match: AT3G53500.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 218.4 bits (555), Expect = 8.1e-57
Identity = 139/241 (57.68%), Postives = 165/241 (68.46%), Query Frame = 0


Query: 42  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 101
           MKRDYAFVEFSDPRDADDARY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+
Sbjct: 1   MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGS 60

Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP--- 161
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP   
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKS 120

Query: 162 -SPRRGR--SRSRSYSRGRSYSRSRSPVKRERSLE------RSEKRSRSPRGRP---SPK 221
            SPRR R  SRSRSYSRGRSYSRSRSPV+RE+S+E      ++ +RS SP+GR    SP 
Sbjct: 121 RSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPD 180

Query: 222 RHSLSPPPSKAMKRSRTPDERSPEEARRSPSPGNRDSPRGRSRSPPRGRSRSPMDEAEDF 264
           R  +   P +      +P E        SP  G  +SP G +     G+ RSP+D+  + 
Sbjct: 181 RKVIDASPKRGSDYDGSPKENGNGRNSASPIVGGGESPVGLN-----GQDRSPIDDEAEL 233

[Close]

BLAST of Lag0040661 vs. TAIR 10
Match: AT2G37340.2 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 201.8 bits (512), Expect = 7.8e-52
Identity = 146/274 (53.28%), Postives = 172/274 (62.77%), Query Frame = 0


Query: 50  EFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGI 109
           EF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+
Sbjct: 20  EFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGV 79

Query: 110 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRS 169
           DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS S
Sbjct: 80  DGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPS 139

Query: 170 RSYSRGRSYSRSRSPV-KRERSLERSEKRSRSPRGRPSPKRHSLSPPPSKAMKRSRTPDE 229
           RS SR RSYSRSRSPV +RERS+   E+RSRSP+                     R  D 
Sbjct: 140 RSLSRSRSYSRSRSPVRRRERSV---EERSRSPK---------------------RMDDS 199

Query: 230 RSPEEARRSPSPGNRDSPRGRSRSPPRGRSRSPMDEAEDFNGGGSRNYRREENGYSRSPS 289
            SP    RSP   +  SP+    SPP    +   +   D +GG       ++NG +   S
Sbjct: 200 LSPRARDRSPVLDDEGSPKIIDGSPPPS-PKLQKEVGSDRDGGSP-----QDNGRNSVVS 259

Query: 290 PL-------PREERSPVND--EDNNGSPRGGSES 308
           P+        +E+RSPV+D  E N  SPR GSES
Sbjct: 260 PVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 259

The following BLAST results are available for this feature:

BLAST of Lag0040661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892927.1	5.8e-158	96.75	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida] ...	[more]
XP_008445806.1	1.9e-156	96.46	PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis ...	[more]
XP_022139066.1	1.9e-156	91.21	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia...	[more]
XP_022942535.1	4.2e-156	92.33	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata]...	[more]
XP_004143594.1	5.4e-156	96.45	serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004...	[more]

BLAST of Lag0040661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYB7	3.6e-78	62.41	Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q8VYA5	4.7e-78	59.13	Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q3T106	6.9e-21	41.63	Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1	[more]
Q16629	7.7e-20	40.45	Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=...	[more]
Q23121	2.9e-19	34.62	Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=62...	[more]

BLAST of Lag0040661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDJ7	9.1e-157	96.46	serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3...	[more]
A0A6J1CET7	9.1e-157	91.21	serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charant...	[more]
A0A6J1FWH1	2.0e-156	92.33	serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucurbita moschat...	[more]
A0A0A0KS31	2.6e-156	96.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1	[more]
A0A6J1JVG4	3.6e-153	93.06	serine/arginine-rich splicing factor RS2Z32-like isoform X3 OS=Cucurbita maxima ...	[more]

BLAST of Lag0040661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53500.2	2.6e-79	62.41	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G37340.1	3.4e-79	59.13	arginine/serine-rich zinc knuckle-containing protein 33	[more]
AT2G37340.3	8.1e-57	54.61	arginine/serine-rich zinc knuckle-containing protein 33	[more]
AT3G53500.1	8.1e-57	57.68	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G37340.2	7.8e-52	53.28	arginine/serine-rich zinc knuckle-containing protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 12..77 e-value: 2.0E-19 score: 80.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 13..74 e-value: 6.6E-15 score: 54.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 11..81 score: 17.216459
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 102..118 e-value: 2.9E-4 score: 30.1 coord: 124..140 e-value: 0.0022 score: 27.3
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 123..139 e-value: 1.8E-4 score: 21.4 coord: 102..117 e-value: 2.1E-6 score: 27.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 102..117 score: 10.147202
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 124..140 score: 10.575755
None	No IPR available	GENE3D	4.10.60.10		coord: 94..121 e-value: 1.6E-6 score: 29.6 coord: 122..162 e-value: 7.4E-6 score: 27.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..275
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 6..289
None	No IPR available	PANTHER	PTHR23147:SF152	SERINE/ARGININE-RICH SPLICING FACTOR RS2Z33	coord: 6..289
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..87 e-value: 1.5E-22 score: 81.6
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 95..141
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040661.1	Lag0040661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding