Lag0040660 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040660
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein RDM16 isoform X1
Location	chr13: 7030955 .. 7033826 (+)
RNA-Seq Expression	Lag0040660
Synteny	Lag0040660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGGATTTCCGAGAAGGAGAAATCAAGCAAGCGTTCCCGAGAAGAACGCGATCGAGACCCTTATTTGTCCCAGGAAATGGATGGGACATCTTCAGCTGCTGGGAGAAGTGGCAATCTCTCTCTTGATGCTTTAGCGAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCTGAGAAGTTGAAGAAAATTCCCCTGGTAAGTTTCAAAACAACGATGCTTTGACCTATTTTTGCTAATTTCACCACCCTCTGATGTTGCTTTTACATATACATGGATGCATGTGCGTGTGTTTTATATTGGTTGTTTCCTTTGTGTATCAAGTTTTATTGTTTGATCTTATATAGATGAAGAAGGCTAAAACAGCAGGTAGCTCAGTGTTGAAACCAGAGGAGAAAGCTAAAGCAGCAGGTAGTGTATTGGGGCCATCGCCACCTACAAATGTTGCCACAGCCCTTTCTTCTGCGGCATCATCAAGTTCGTTGACCTTACCGGCTGCCAATGCACTTGGTGGTGGTATTAATGTCCCAGCTGGCCTTACCTCTATACCCCATTTTGAGGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAGCGGATGTTGCTGTTCCGCAGAAGCCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGCAGGGAAATAGACGAACAAGGAAATGTGGTCAATATAACCAAACCCAGCAACCTTAGCACTCTAAAGGTTTGGATTTGGAATGAACTTATGACCTTTTTAGAGGTTTTCTTTATTTTATTAACTTTAAATGGATTGACATTATATATATTCTTAACTTTGCAGGTTAACATCAACAAGCAGAAAAAGGACGCATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCCGATTCTAATCCTCATTACGATGAGAGGATGGGTATAAATAAAACTAAATTGTTGAGGCCAAAGAGGATGAGTTTCCAGTTTGTGGAGGAAGGGAAATGGTCTAAGGAGGCTGAGACCATAAAATTGAGGGTAATTATAGTTTGTTCATACTTTCTTTTGGTGAAAAATTGATCGTGTAATTTAAAAAAAAAATCCTTATGTTCTTGTTACAGAGTAAATTTGGAGAGGCACAAGCCAAAGAACGAAAGGAGAAGCAGGCCCAATTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCGAATTTGATCGAGGTATCAGAGAGAGTTATAGTGAAGGAAAAAACGAAAGATCCAATTCCTGAAATTGAGTGGTGGTAAGCTGATATTTACTTTCTATACTTGTAATTCCAAGTATTTTTTAGTTTTCCATTTTATGATTCTTCAATCAATGATATGTTTGTCTGTGTTTGTGTGGAAATTTTCTTTGTGGTAAATAGTTACACTAAGGGAATGTTTTCAGGTATCAAGTTTGCATGTCTTTTTCCTTCATTATTTACGGGCTGTTTGGTTCAAGATTTGCATAGGATGACATTTCTTGGAAGTAGTATGCGTGAAATTAAGATGTTTGGGAATATAGTATCTTTGTGCTTTGGCCAAAACGAGCATAGCTCAGCATAATTAACACGTACCTTCGACCAGGAGGTCATAGGTTCGAATCCCCCGACCCCCAAATGTTGTTGTACTAAAATAAAATAGTATCTTTGTGCTTTGGTGTATTGACATTAAGAAGTGTTGGATACGATTGCAATCTTGATTCATTTCGGCGGTTAGGAAGCTTGTATATCATCTAGGAACAGAGGAGGGCAGTTCTTTTTTTACTTTTGTATTCTACAATTTGATAGAAGTTGAGCAAACTGCATACATTCTTTTCCCGTTTCTCCTTTTGCTTTCTAGCATTTTGTTAATTTCTAGCTTATGTTGGGAATTGGGATCCCTTATTAGATCCAATTCTAATATTTTGTTATTTTTTAAAAACTATTTAGGGATGTCCCTCTTTTGCATTTTGGCACATACGACGGTGTGGGAGATGGTTTTGTGGCCGATGATAAAATAAGGAAGGATAAGATTACAATATATGTGGAGCATCCTCGTCCAATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGGACACAGCGTCGTCTAGCAAAAGAGAAAGACAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTGGAGAAAGAGATTCGTGCTGCAGCCGCTGAGAGGGAACAGGCTCACATAGATAGAAATATTGCCCGTAAACTTACCCCTGCAGAACGCCGTGAGAAGAAAGAACGTAAACTCTTTGATGATACAAATTCACTGGAGACAATCGTGTCTGTTTACAAGATCAACGATTTATCACACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCAAGGGAGAACCGTTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTTGTTGAAGGGGGAAGCAAATCCATCAAGAGGTACGGGAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAGGAGGACGAAGAGGACGACGAAAACGACGACAAGCCTGTTAACAAATGTTCATTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAAATTTTTTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGGTGTTGGTCACTATTGGGATCTTGCCGTTAACTTTTCCGATGATCAAATATAA

mRNA sequence

ATGGATAGGATTTCCGAGAAGGAGAAATCAAGCAAGCGTTCCCGAGAAGAACGCGATCGAGACCCTTATTTGTCCCAGGAAATGGATGGGACATCTTCAGCTGCTGGGAGAAGTGGCAATCTCTCTCTTGATGCTTTAGCGAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCTGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAGGCTAAAACAGCAGGTAGCTCAGTGTTGAAACCAGAGGAGAAAGCTAAAGCAGCAGGTAGTGTATTGGGGCCATCGCCACCTACAAATGTTGCCACAGCCCTTTCTTCTGCGGCATCATCAAGTTCGTTGACCTTACCGGCTGCCAATGCACTTGGTGGTGGTATTAATGTCCCAGCTGGCCTTACCTCTATACCCCATTTTGAGGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAGCGGATGTTGCTGTTCCGCAGAAGCCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGCAGGGAAATAGACGAACAAGGAAATGTGGTCAATATAACCAAACCCAGCAACCTTAGCACTCTAAAGGTTAACATCAACAAGCAGAAAAAGGACGCATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCCGATTCTAATCCTCATTACGATGAGAGGATGGGTATAAATAAAACTAAATTGTTGAGGCCAAAGAGGATGAGTTTCCAGTTTGTGGAGGAAGGGAAATGGTCTAAGGAGGCTGAGACCATAAAATTGAGGAGTAAATTTGGAGAGGCACAAGCCAAAGAACGAAAGGAGAAGCAGGCCCAATTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCGAATTTGATCGAGGTATCAGAGAGAGTTATAGTGAAGGAAAAAACGAAAGATCCAATTCCTGAAATTGAGTGGTGGGATGTCCCTCTTTTGCATTTTGGCACATACGACGGTGTGGGAGATGGTTTTGTGGCCGATGATAAAATAAGGAAGGATAAGATTACAATATATGTGGAGCATCCTCGTCCAATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGGACACAGCGTCGTCTAGCAAAAGAGAAAGACAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTGGAGAAAGAGATTCGTGCTGCAGCCGCTGAGAGGGAACAGGCTCACATAGATAGAAATATTGCCCGTAAACTTACCCCTGCAGAACGCCGTGAGAAGAAAGAACGTAAACTCTTTGATGATACAAATTCACTGGAGACAATCGTGTCTGTTTACAAGATCAACGATTTATCACACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCAAGGGAGAACCGTTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTTGTTGAAGGGGGAAGCAAATCCATCAAGAGGTACGGGAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAGGAGGACGAAGAGGACGACGAAAACGACGACAAGCCTGTTAACAAATGTTCATTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAAATTTTTTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGGTGTTGGTCACTATTGGGATCTTGCCGTTAACTTTTCCGATGATCAAATATAA

Coding sequence (CDS)

ATGGATAGGATTTCCGAGAAGGAGAAATCAAGCAAGCGTTCCCGAGAAGAACGCGATCGAGACCCTTATTTGTCCCAGGAAATGGATGGGACATCTTCAGCTGCTGGGAGAAGTGGCAATCTCTCTCTTGATGCTTTAGCGAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCTGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAGGCTAAAACAGCAGGTAGCTCAGTGTTGAAACCAGAGGAGAAAGCTAAAGCAGCAGGTAGTGTATTGGGGCCATCGCCACCTACAAATGTTGCCACAGCCCTTTCTTCTGCGGCATCATCAAGTTCGTTGACCTTACCGGCTGCCAATGCACTTGGTGGTGGTATTAATGTCCCAGCTGGCCTTACCTCTATACCCCATTTTGAGGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAGCGGATGTTGCTGTTCCGCAGAAGCCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGCAGGGAAATAGACGAACAAGGAAATGTGGTCAATATAACCAAACCCAGCAACCTTAGCACTCTAAAGGTTAACATCAACAAGCAGAAAAAGGACGCATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCCGATTCTAATCCTCATTACGATGAGAGGATGGGTATAAATAAAACTAAATTGTTGAGGCCAAAGAGGATGAGTTTCCAGTTTGTGGAGGAAGGGAAATGGTCTAAGGAGGCTGAGACCATAAAATTGAGGAGTAAATTTGGAGAGGCACAAGCCAAAGAACGAAAGGAGAAGCAGGCCCAATTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCGAATTTGATCGAGGTATCAGAGAGAGTTATAGTGAAGGAAAAAACGAAAGATCCAATTCCTGAAATTGAGTGGTGGGATGTCCCTCTTTTGCATTTTGGCACATACGACGGTGTGGGAGATGGTTTTGTGGCCGATGATAAAATAAGGAAGGATAAGATTACAATATATGTGGAGCATCCTCGTCCAATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGGACACAGCGTCGTCTAGCAAAAGAGAAAGACAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTGGAGAAAGAGATTCGTGCTGCAGCCGCTGAGAGGGAACAGGCTCACATAGATAGAAATATTGCCCGTAAACTTACCCCTGCAGAACGCCGTGAGAAGAAAGAACGTAAACTCTTTGATGATACAAATTCACTGGAGACAATCGTGTCTGTTTACAAGATCAACGATTTATCACACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCAAGGGAGAACCGTTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTTGTTGAAGGGGGAAGCAAATCCATCAAGAGGTACGGGAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAGGAGGACGAAGAGGACGACGAAAACGACGACAAGCCTGTTAACAAATGTTCATTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAAATTTTTTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGGTGTTGGTCACTATTGGGATCTTGCCGTTAACTTTTCCGATGATCAAATATAA

Protein sequence

MDRISEKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKAKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI

Homology

[Close]

BLAST of Lag0040660 vs. NCBI nr
Match: XP_022139032.1 (protein RDM16 isoform X3 [Momordica charantia])

HSP 1 Score: 1048.1 bits (2709), Expect = 3.0e-302
Identity = 554/607 (91.27%), Postives = 574/607 (94.56%), Query Frame = 0


Query: 22  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSS 81
           P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SS
Sbjct: 35  PFLS-STDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSS 94

Query: 82  VLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLTSIPH 141
           V+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLTSIPH
Sbjct: 95  VVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPH 154

Query: 142 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDE 201
           FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDE
Sbjct: 155 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDE 214

Query: 202 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPK 261
           QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPK
Sbjct: 215 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPK 274

Query: 262 RMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV 321
           RM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Sbjct: 275 RMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERV 334

Query: 322 IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEP 381
           IVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EP
Sbjct: 335 IVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEP 394

Query: 382 APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT 441
           APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT
Sbjct: 395 APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT 454

Query: 442 QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKIN 501
           QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI 
Sbjct: 455 QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIY 514

Query: 502 DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK 561
           DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK
Sbjct: 515 DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK 574

Query: 562 EDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 621
           E+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
Sbjct: 575 EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 634

Query: 622 NFSDDQI 625
           NFSDDQI
Sbjct: 635 NFSDDQI 640

[Close]

BLAST of Lag0040660 vs. NCBI nr
Match: XP_022139033.1 (protein RDM16 isoform X4 [Momordica charantia])

HSP 1 Score: 1048.1 bits (2709), Expect = 3.0e-302
Identity = 554/607 (91.27%), Postives = 574/607 (94.56%), Query Frame = 0


Query: 22  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSS 81
           P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SS
Sbjct: 25  PFLS-STDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSS 84

Query: 82  VLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLTSIPH 141
           V+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLTSIPH
Sbjct: 85  VVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPH 144

Query: 142 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDE 201
           FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDE
Sbjct: 145 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDE 204

Query: 202 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPK 261
           QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPK
Sbjct: 205 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPK 264

Query: 262 RMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV 321
           RM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Sbjct: 265 RMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERV 324

Query: 322 IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEP 381
           IVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EP
Sbjct: 325 IVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEP 384

Query: 382 APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT 441
           APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT
Sbjct: 385 APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT 444

Query: 442 QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKIN 501
           QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI 
Sbjct: 445 QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIY 504

Query: 502 DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK 561
           DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK
Sbjct: 505 DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK 564

Query: 562 EDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 621
           E+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
Sbjct: 565 EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 624

Query: 622 NFSDDQI 625
           NFSDDQI
Sbjct: 625 NFSDDQI 630

[Close]

BLAST of Lag0040660 vs. NCBI nr
Match: XP_022139031.1 (protein RDM16 isoform X2 [Momordica charantia])

HSP 1 Score: 1045.4 bits (2702), Expect = 1.9e-301
Identity = 552/611 (90.34%), Postives = 573/611 (93.78%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKT 77
           R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +
Sbjct: 317 RSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSS 376

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLT 137
           A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLT
Sbjct: 377 ASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLT 436

Query: 138 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGR 197
           SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGR
Sbjct: 437 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGR 496

Query: 198 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKL 257
           EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKL
Sbjct: 497 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKL 556

Query: 258 LRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV 317
           LRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Sbjct: 557 LRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEV 616

Query: 318 SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEP 377
           SERVIVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEP
Sbjct: 617 SERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEP 676

Query: 378 PAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG 437
           P EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG
Sbjct: 677 PVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG 736

Query: 438 SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSV 497
           SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSV
Sbjct: 737 SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSV 796

Query: 498 YKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA 557
           YKI DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA
Sbjct: 797 YKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA 856

Query: 558 ASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW 617
           ASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
Sbjct: 857 ASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW 916

Query: 618 DLAVNFSDDQI 625
           DLAVNFSDDQI
Sbjct: 917 DLAVNFSDDQI 927

[Close]

BLAST of Lag0040660 vs. NCBI nr
Match: XP_022139030.1 (protein RDM16 isoform X1 [Momordica charantia])

HSP 1 Score: 1045.4 bits (2702), Expect = 1.9e-301
Identity = 552/611 (90.34%), Postives = 573/611 (93.78%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKT 77
           R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +
Sbjct: 323 RSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSS 382

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLT 137
           A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLT
Sbjct: 383 ASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLT 442

Query: 138 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGR 197
           SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGR
Sbjct: 443 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGR 502

Query: 198 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKL 257
           EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKL
Sbjct: 503 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKL 562

Query: 258 LRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV 317
           LRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Sbjct: 563 LRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEV 622

Query: 318 SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEP 377
           SERVIVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEP
Sbjct: 623 SERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEP 682

Query: 378 PAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG 437
           P EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG
Sbjct: 683 PVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG 742

Query: 438 SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSV 497
           SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSV
Sbjct: 743 SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSV 802

Query: 498 YKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA 557
           YKI DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA
Sbjct: 803 YKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA 862

Query: 558 ASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW 617
           ASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
Sbjct: 863 ASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW 922

Query: 618 DLAVNFSDDQI 625
           DLAVNFSDDQI
Sbjct: 923 DLAVNFSDDQI 933

[Close]

BLAST of Lag0040660 vs. NCBI nr
Match: KAG7030755.1 (Protein RDM16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1038.1 bits (2683), Expect = 3.1e-299
Identity = 550/610 (90.16%), Postives = 573/610 (93.93%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKT 77
           R  + +     DGTSS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +
Sbjct: 307 RSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGWSSS 366

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTS 137
           A SS +K EEKAK AG +LG S  TNV T  S+  +SSS TLPAANALGGGINVPA LTS
Sbjct: 367 ASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINVPASLTS 426

Query: 138 IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGRE 197
           IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN+A DVAV QKP+KAPVLRLDALGRE
Sbjct: 427 IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRLDALGRE 486

Query: 198 IDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLL 257
           IDEQGNVVN+TKPS+LSTLKVNINKQKKDAFQILKPELDVDP+SNPHYDERMGINKTKLL
Sbjct: 487 IDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGINKTKLL 546

Query: 258 RPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVS 317
           RPKRMSF FVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVS
Sbjct: 547 RPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVS 606

Query: 318 ERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPP 377
           ERV VKEKTK+PIPEIEWWDVPLLH GTY+ VGDGFVADDKIRKDKITIYVEHPRPIEPP
Sbjct: 607 ERV-VKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPRPIEPP 666

Query: 378 AEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGS 437
           AEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGS
Sbjct: 667 AEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGS 726

Query: 438 EATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVY 497
           EATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLF+DTNSLETIVSVY
Sbjct: 727 EATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLETIVSVY 786

Query: 498 KINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAA 557
           KINDLSHPQARFKVDVNARENRL+GCAVICD ISVLVVEGGSKSIKRYGKLML+RINWAA
Sbjct: 787 KINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKRINWAA 846

Query: 558 SVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWD 617
           SVKE+EE+DENDDKPVNKCSLVWQGSVAKSSF+KF IQECMTEAAARKIFADAGVGHYWD
Sbjct: 847 SVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADAGVGHYWD 906

Query: 618 LAVNFSDDQI 625
           LAVNFSDD I
Sbjct: 907 LAVNFSDDLI 915

[Close]

BLAST of Lag0040660 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 1.6e-205
Identity = 398/625 (63.68%), Postives = 475/625 (76.00%), Query Frame = 0


Query: 10  SSKRSREERDRDPYLSQEMDGTSSAAGR--------SGNLSLDA---LAKAKKALQMQKE 69
           SS  + +E       S E+ G SS  GR        S NL LD+    AKA+KALQ+QK 
Sbjct: 184 SSISTTDENKASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQKG 243

Query: 70  LAEKLKKIPLMKKAKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA 129
           LA++LK +PL+KKA            K  + GS     PP+    A+S+  S +S TLP 
Sbjct: 244 LADRLKNLPLLKKA-----------TKPTSEGSPHTRVPPSTTTPAVSTGTSFAS-TLPH 303

Query: 130 ANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQ 189
                      AG  SI + EAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q
Sbjct: 304 TGL--------AGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTVAQ 363

Query: 190 KPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDS 249
           +P K PVLR+DALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+L+ D   
Sbjct: 364 RPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKE 423

Query: 250 NPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA 309
           NP++D RMGI++ K+LRPKRMSFQFVEEGKW+++AE +K +S FGEA+AKE K KQAQLA
Sbjct: 424 NPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQAQLA 483

Query: 310 KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRK 369
           KA    DINPNLIEVSERV  KEK K+PIP++EWWD  +L  G Y  + DG + +  ++ 
Sbjct: 484 KAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGTITESHLKI 543

Query: 370 DKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEP 429
           +K+T Y+EHPRPIEPPAE APPPPQPLKLTKKEQKKLRTQRRLAKEK++QEMIRQGL+EP
Sbjct: 544 EKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEMIRQGLLEP 603

Query: 430 PKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKER 489
           PK KVKMSNLMKVLGSEATQDPTKLEKEIR AAAEREQAH DRN ARKLTPAE+REKKER
Sbjct: 604 PKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKER 663

Query: 490 KLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKS 549
           KLFDD  ++ETIVSVYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+VVEG SK+
Sbjct: 664 KLFDDPTTVETIVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVVVVEGKSKA 723

Query: 550 IKRYGKLMLRRINW-AASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTE 609
           IKRYGKLM++RINW  A  KE  ED+E +    NKC LVWQGS+ K SF++F + EC+TE
Sbjct: 724 IKRYGKLMMKRINWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRFHVHECVTE 783

Query: 610 AAARKIFADAGVGHYWDLAVNFSDD 623
           + A+K+F DAGV HYWDLAVN+SDD
Sbjct: 784 STAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of Lag0040660 vs. ExPASy Swiss-Prot
Match: Q5ZJ85 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.1e-68
Identity = 219/640 (34.22%), Postives = 336/640 (52.50%), Query Frame = 0


Query: 6   EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKK 65
           E+ +SS+ S+   DR+    +E+       G    +S ++    K+ +   +E+ ++ + 
Sbjct: 71  EEGRSSRHSKSNSDRN--RKREL---KDVFGDDSEVSKESSGVKKRRIPRFEEVEDEPEV 130

Query: 66  IP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL 125
           IP            ++  +   ++  + EE+ K    +  P+P   +      ++SS S 
Sbjct: 131 IPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKI------SSSSQSE 190

Query: 126 TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLF 185
            LP  N +       A        E  ++A EL AR+        G   +     L NL 
Sbjct: 191 RLPIGNTVQPS---QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLH 250

Query: 186 PGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF- 245
              IA      +  TK   L LD  GR +D  G  + +T    + TLK NI   K++ F 
Sbjct: 251 AMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFK 310

Query: 246 QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA 305
           Q LK +   D +SN ++D R+ I  T   R KR +F+F E+GK+ K A+  +LR+K   A
Sbjct: 311 QQLKEKPSEDMESNTYFDLRVSI--TPAQRQKR-TFKFHEKGKFEKIAQ--RLRTK---A 370

Query: 306 QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDG 365
           Q K+ + + +Q A+ K     +  L  ++ +   KE  +  IPEIEWWD  ++  G    
Sbjct: 371 QLKKLQAEISQAAR-KTGIHTSTKLALITPK---KELKEGEIPEIEWWDSYIIPNGLDLK 430

Query: 366 VGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK 425
            G     D+      IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K
Sbjct: 431 GGTSSKKDEYF---GITNLVEHPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQK 490

Query: 426 DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR 485
           + QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N AR
Sbjct: 491 ELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAAR 550

Query: 486 KLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICD 545
           KLT  +R+ KK +KL +D  S    ++VY++ +LS+P  +FK++ NA +  LTG  V+  
Sbjct: 551 KLTAEQRKAKKIKKLKEDV-SQGVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHK 610

Query: 546 GISVLVVEGGSKSIKRYGKLMLRRINWAASV-----KEDEEDDENDDKPVNKCSLVWQGS 605
            ++V+VVEGG K+ K++ +LML RI W         ++D+E DE   K  NKCSLVW+G+
Sbjct: 611 DVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGT 670

Query: 606 VAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS 621
               SF +   ++C TE  AR+ F   G  HYWDLA++ S
Sbjct: 671 AKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSES 678

[Close]

BLAST of Lag0040660 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 9.9e-67
Identity = 212/642 (33.02%), Postives = 330/642 (51.40%), Query Frame = 0


Query: 6   EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKK 65
           E+ +SS+ S+   DR    S++ +      G    +S ++    K+ +   +E+ E+ + 
Sbjct: 71  EEGRSSRHSKSSSDR----SRKRE-LKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEV 130

Query: 66  IP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL 125
           IP            ++  +   ++  + EE+ K    +  P+P         + +SS   
Sbjct: 131 IPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQP------KTPSSSQPE 190

Query: 126 TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLF 185
            LP  N +       A        E  ++A EL AR+        G   +     L NL 
Sbjct: 191 RLPIGNTIQPS---QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLH 250

Query: 186 PGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF- 245
              IA      +  TK   L LD  GR +D  G  + +T    + TLK NI   K++ F 
Sbjct: 251 AMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFK 310

Query: 246 QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA 305
           Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++  + 
Sbjct: 311 QQLKEKPSEDMESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKL 370

Query: 306 QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDG 365
           QA      +   A  K     +  L  ++ +   KE  +  IPEIEWWD  ++  G +D 
Sbjct: 371 QA------EISQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSYIIPNG-FD- 430

Query: 366 VGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAK 425
                  ++  R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   
Sbjct: 431 ----LTEENPKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREA 490

Query: 426 EKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNI 485
           +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N 
Sbjct: 491 QKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANA 550

Query: 486 ARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVI 545
           ARKLT  +R+ KK +KL +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+
Sbjct: 551 ARKLTAEQRKVKKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVL 610

Query: 546 CDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSLVWQ 605
              ++V+VVEGG K+ K++ +LML RI W          +DEE DE   K  NKC LVW+
Sbjct: 611 HKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWE 670

Query: 606 GSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS 621
           G+    SF +   ++C TE  AR+ F   G  HYWDLA++ S
Sbjct: 671 GTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSES 677

[Close]

BLAST of Lag0040660 vs. ExPASy Swiss-Prot
Match: Q5R5F1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 9.9e-67
Identity = 212/642 (33.02%), Postives = 330/642 (51.40%), Query Frame = 0


Query: 6   EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKK 65
           E+ +SS+ S+   DR    S++ +      G    +S ++    K+ +   +E+ E+ + 
Sbjct: 71  EEGRSSRHSKSSSDR----SRKRE-LKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEV 130

Query: 66  IP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL 125
           IP            ++  +   ++  + EE+ K    +  P+P         + +SS   
Sbjct: 131 IPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQP------KTPSSSQPE 190

Query: 126 TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLF 185
            LP  N +       A        E  ++A EL AR+        G   +     L NL 
Sbjct: 191 RLPIGNTIQPS---QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLH 250

Query: 186 PGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF- 245
              IA      +  TK   L LD  GR +D  G  + +T    + TLK NI   K++ F 
Sbjct: 251 AMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFR 310

Query: 246 QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA 305
           Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++  + 
Sbjct: 311 QQLKEKPSEDMESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKL 370

Query: 306 QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDG 365
           QA      +   A  K     +  L  ++ +   KE  +  IPEIEWWD  ++  G +D 
Sbjct: 371 QA------EISQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSYIIPNG-FD- 430

Query: 366 VGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAK 425
                  ++  R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   
Sbjct: 431 ----LTEENPKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREA 490

Query: 426 EKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNI 485
           +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N 
Sbjct: 491 QKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANA 550

Query: 486 ARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVI 545
           ARKLT  +R+ KK +KL +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+
Sbjct: 551 ARKLTAEQRKVKKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVL 610

Query: 546 CDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSLVWQ 605
              ++V+VVEGG K+ K++ +LML RI W          +DEE DE   K  NKC LVW+
Sbjct: 611 HKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWE 670

Query: 606 GSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS 621
           G+    SF +   ++C TE  AR+ F   G  HYWDLA++ S
Sbjct: 671 GTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSES 677

[Close]

BLAST of Lag0040660 vs. ExPASy Swiss-Prot
Match: Q2KIA6 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.3e-66
Identity = 211/645 (32.71%), Postives = 335/645 (51.94%), Query Frame = 0


Query: 6   EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKK 65
           E+ +SS+ S+   DR    S++ D      G    +S ++    K+ +   +E+ E+ + 
Sbjct: 71  EEGRSSRHSKSSSDR----SRKRD-LKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEV 130

Query: 66  IP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL 125
           IP            ++  +   ++  + EE+ K    +  P+P         + +SS   
Sbjct: 131 IPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQP------KTPSSSQPE 190

Query: 126 TLPAANALGGGINVPAGLTSIPHFEAVKRAQ-----------ELAARMGFRQDPEFAPLI 185
            LP  N +      P+   +  + +A+++A+           +LA + G   +     L 
Sbjct: 191 RLPIGNTI-----QPSQAATFMN-DAIEKARKAAELQASIQAQLALKPGLIGNANMVGLA 250

Query: 186 NLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKD 245
           NL    IA      +  TK   L LD  GR +D  G  + +T    + TLK NI   K++
Sbjct: 251 NLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKRE 310

Query: 246 AF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKF 305
            F Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++ 
Sbjct: 311 QFKQQLKEKPSEDMESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQL 370

Query: 306 GEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGT 365
            + QA      +   A  K     +  L  ++ +   KE  +  IPEIEWWD  ++  G 
Sbjct: 371 EKLQA------EISQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSYIIPNG- 430

Query: 366 YDGVGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRR 425
           +D        ++  R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R
Sbjct: 431 FD-----LTEENPKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTR 490

Query: 426 LAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHID 485
              +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH +
Sbjct: 491 REAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEE 550

Query: 486 RNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGC 545
            N ARKLT  +R+ KK +KL +D  S    +SVY++ +LS+P  +FK++ NA +  LTG 
Sbjct: 551 ANAARKLTAEQRKVKKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGV 610

Query: 546 AVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSL 605
            V+   ++V+VVEGG K+ K++ +LML RI W          +DEE DE   K  NKC L
Sbjct: 611 VVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVL 670

Query: 606 VWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS 621
           VW+G+    SF +   ++C TE  AR+ F   G  HYWDLA++ S
Sbjct: 671 VWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSES 677

[Close]

BLAST of Lag0040660 vs. ExPASy TrEMBL
Match: A0A6J1CCW0 (protein RDM16 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1048.1 bits (2709), Expect = 1.4e-302
Identity = 554/607 (91.27%), Postives = 574/607 (94.56%), Query Frame = 0


Query: 22  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSS 81
           P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SS
Sbjct: 35  PFLS-STDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSS 94

Query: 82  VLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLTSIPH 141
           V+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLTSIPH
Sbjct: 95  VVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPH 154

Query: 142 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDE 201
           FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDE
Sbjct: 155 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDE 214

Query: 202 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPK 261
           QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPK
Sbjct: 215 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPK 274

Query: 262 RMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV 321
           RM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Sbjct: 275 RMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERV 334

Query: 322 IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEP 381
           IVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EP
Sbjct: 335 IVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEP 394

Query: 382 APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT 441
           APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT
Sbjct: 395 APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT 454

Query: 442 QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKIN 501
           QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI 
Sbjct: 455 QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIY 514

Query: 502 DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK 561
           DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK
Sbjct: 515 DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK 574

Query: 562 EDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 621
           E+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
Sbjct: 575 EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 634

Query: 622 NFSDDQI 625
           NFSDDQI
Sbjct: 635 NFSDDQI 640

[Close]

BLAST of Lag0040660 vs. ExPASy TrEMBL
Match: A0A6J1CEQ9 (protein RDM16 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1048.1 bits (2709), Expect = 1.4e-302
Identity = 554/607 (91.27%), Postives = 574/607 (94.56%), Query Frame = 0


Query: 22  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSS 81
           P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SS
Sbjct: 25  PFLS-STDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSS 84

Query: 82  VLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLTSIPH 141
           V+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLTSIPH
Sbjct: 85  VVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPH 144

Query: 142 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDE 201
           FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDE
Sbjct: 145 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDE 204

Query: 202 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPK 261
           QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPK
Sbjct: 205 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPK 264

Query: 262 RMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV 321
           RM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Sbjct: 265 RMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERV 324

Query: 322 IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEP 381
           IVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EP
Sbjct: 325 IVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEP 384

Query: 382 APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT 441
           APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT
Sbjct: 385 APPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEAT 444

Query: 442 QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKIN 501
           QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI 
Sbjct: 445 QDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIY 504

Query: 502 DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK 561
           DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK
Sbjct: 505 DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK 564

Query: 562 EDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 621
           E+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
Sbjct: 565 EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 624

Query: 622 NFSDDQI 625
           NFSDDQI
Sbjct: 625 NFSDDQI 630

[Close]

BLAST of Lag0040660 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1045.4 bits (2702), Expect = 9.3e-302
Identity = 552/611 (90.34%), Postives = 573/611 (93.78%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKT 77
           R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +
Sbjct: 323 RSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSS 382

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLT 137
           A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLT
Sbjct: 383 ASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLT 442

Query: 138 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGR 197
           SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGR
Sbjct: 443 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGR 502

Query: 198 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKL 257
           EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKL
Sbjct: 503 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKL 562

Query: 258 LRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV 317
           LRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Sbjct: 563 LRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEV 622

Query: 318 SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEP 377
           SERVIVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEP
Sbjct: 623 SERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEP 682

Query: 378 PAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG 437
           P EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG
Sbjct: 683 PVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG 742

Query: 438 SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSV 497
           SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSV
Sbjct: 743 SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSV 802

Query: 498 YKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA 557
           YKI DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA
Sbjct: 803 YKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA 862

Query: 558 ASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW 617
           ASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
Sbjct: 863 ASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW 922

Query: 618 DLAVNFSDDQI 625
           DLAVNFSDDQI
Sbjct: 923 DLAVNFSDDQI 933

[Close]

BLAST of Lag0040660 vs. ExPASy TrEMBL
Match: A0A6J1CBF9 (protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1045.4 bits (2702), Expect = 9.3e-302
Identity = 552/611 (90.34%), Postives = 573/611 (93.78%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKT 77
           R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +
Sbjct: 317 RSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSS 376

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLT 137
           A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLT
Sbjct: 377 ASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLT 436

Query: 138 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGR 197
           SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGR
Sbjct: 437 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGR 496

Query: 198 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKL 257
           EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKL
Sbjct: 497 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKL 556

Query: 258 LRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV 317
           LRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Sbjct: 557 LRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEV 616

Query: 318 SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEP 377
           SERVIVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEP
Sbjct: 617 SERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEP 676

Query: 378 PAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG 437
           P EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG
Sbjct: 677 PVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLG 736

Query: 438 SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSV 497
           SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSV
Sbjct: 737 SEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSV 796

Query: 498 YKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA 557
           YKI DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA
Sbjct: 797 YKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWA 856

Query: 558 ASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW 617
           ASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
Sbjct: 857 ASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW 916

Query: 618 DLAVNFSDDQI 625
           DLAVNFSDDQI
Sbjct: 917 DLAVNFSDDQI 927

[Close]

BLAST of Lag0040660 vs. ExPASy TrEMBL
Match: A0A6J1ILJ1 (protein RDM16-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477318 PE=4 SV=1)

HSP 1 Score: 1036.2 bits (2678), Expect = 5.7e-299
Identity = 548/610 (89.84%), Postives = 573/610 (93.93%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKT 77
           R  + +     DGTSS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +
Sbjct: 307 RSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGWSSS 366

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTS 137
           A SS +K EEKAK AG +LG +  TNV T LS+  +SS  TLPAANALGGGINVPA LTS
Sbjct: 367 ASSSAVKSEEKAKLAGGLLGLTATTNVTTTLSAGVASSLSTLPAANALGGGINVPASLTS 426

Query: 138 IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGRE 197
           IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN+A DVAV QKP+KAPVLRLDALGRE
Sbjct: 427 IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRLDALGRE 486

Query: 198 IDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLL 257
           IDEQGNVVN+TKPS+LSTLKVNINKQKKDAFQILKPELDVDP+SNPHYDERMGINKTKLL
Sbjct: 487 IDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGINKTKLL 546

Query: 258 RPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVS 317
           RPKRMSF FVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVS
Sbjct: 547 RPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVS 606

Query: 318 ERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPP 377
           ERV VK+KTK+PIPEIEWWDVPLLH GTY+ VGDGFVADDKIRKDKITIYVEHPRPIEPP
Sbjct: 607 ERV-VKDKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPRPIEPP 666

Query: 378 AEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGS 437
           AEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGS
Sbjct: 667 AEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGS 726

Query: 438 EATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVY 497
           EATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLF+DTNSLETIVSVY
Sbjct: 727 EATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLETIVSVY 786

Query: 498 KINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAA 557
           KINDLSHPQARFKVDVNARENRL+GCAVICD ISVLVVEGGSKSIKRYGKLML+RINWAA
Sbjct: 787 KINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKRINWAA 846

Query: 558 SVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWD 617
           SVKE+EE+DENDDKPVNKCSLVWQGSVAKSSF+KF IQECMTEAAARKIFADAGVGHYWD
Sbjct: 847 SVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADAGVGHYWD 906

Query: 618 LAVNFSDDQI 625
           LAVNFSDD I
Sbjct: 907 LAVNFSDDLI 915

[Close]

BLAST of Lag0040660 vs. TAIR 10
Match: AT1G28060.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 717.2 bits (1850), Expect = 1.1e-206
Identity = 398/625 (63.68%), Postives = 475/625 (76.00%), Query Frame = 0


Query: 10  SSKRSREERDRDPYLSQEMDGTSSAAGR--------SGNLSLDA---LAKAKKALQMQKE 69
           SS  + +E       S E+ G SS  GR        S NL LD+    AKA+KALQ+QK 
Sbjct: 184 SSISTTDENKASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQKG 243

Query: 70  LAEKLKKIPLMKKAKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA 129
           LA++LK +PL+KKA            K  + GS     PP+    A+S+  S +S TLP 
Sbjct: 244 LADRLKNLPLLKKA-----------TKPTSEGSPHTRVPPSTTTPAVSTGTSFAS-TLPH 303

Query: 130 ANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQ 189
                      AG  SI + EAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q
Sbjct: 304 TGL--------AGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTVAQ 363

Query: 190 KPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDS 249
           +P K PVLR+DALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+L+ D   
Sbjct: 364 RPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKE 423

Query: 250 NPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA 309
           NP++D RMGI++ K+LRPKRMSFQFVEEGKW+++AE +K +S FGEA+AKE K KQAQLA
Sbjct: 424 NPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQAQLA 483

Query: 310 KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRK 369
           KA    DINPNLIEVSERV  KEK K+PIP++EWWD  +L  G Y  + DG + +  ++ 
Sbjct: 484 KAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGTITESHLKI 543

Query: 370 DKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEP 429
           +K+T Y+EHPRPIEPPAE APPPPQPLKLTKKEQKKLRTQRRLAKEK++QEMIRQGL+EP
Sbjct: 544 EKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEMIRQGLLEP 603

Query: 430 PKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKER 489
           PK KVKMSNLMKVLGSEATQDPTKLEKEIR AAAEREQAH DRN ARKLTPAE+REKKER
Sbjct: 604 PKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKER 663

Query: 490 KLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKS 549
           KLFDD  ++ETIVSVYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+VVEG SK+
Sbjct: 664 KLFDDPTTVETIVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVVVVEGKSKA 723

Query: 550 IKRYGKLMLRRINW-AASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTE 609
           IKRYGKLM++RINW  A  KE  ED+E +    NKC LVWQGS+ K SF++F + EC+TE
Sbjct: 724 IKRYGKLMMKRINWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRFHVHECVTE 783

Query: 610 AAARKIFADAGVGHYWDLAVNFSDD 623
           + A+K+F DAGV HYWDLAVN+SDD
Sbjct: 784 STAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of Lag0040660 vs. TAIR 10
Match: AT3G55930.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 342.8 bits (878), Expect = 5.7e-94
Identity = 214/443 (48.31%), Postives = 273/443 (61.63%), Query Frame = 0


Query: 179 KPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDS 238
           K TK  VLR+DALGREIDE GNV+++TKP N STL VNI                   D+
Sbjct: 91  KQTKGFVLRVDALGREIDEHGNVISVTKPINHSTLMVNIR------------------DN 150

Query: 239 NPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA 298
            PH               +++S                K+ S++ +A             
Sbjct: 151 VPH---------------RKLS----------------KILSEWWDA------------- 210

Query: 299 KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRK 358
                                K  T D I E+   D  +L   T        + ++ +  
Sbjct: 211 ---------------------KILTDDTINELS-CDPNILIMDT--------ITENHLNM 270

Query: 359 DKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEP 418
                ++EHP PIEPPAE A PPPQPLK+TK+E+KKLRT RR+AKE +++EMI QG +EP
Sbjct: 271 KVFNCHIEHPFPIEPPAEAASPPPQPLKMTKEERKKLRTLRRVAKEMEKREMISQGRVEP 330

Query: 419 PKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKER 478
            K KVKMSNLMKV  SEATQ+PTKLEKEIR  AAEREQAH+DRN+ARKLTPAE+REKKER
Sbjct: 331 QKSKVKMSNLMKVRASEATQNPTKLEKEIRTEAAEREQAHMDRNVARKLTPAEKREKKER 390

Query: 479 KLF-DDTNSLETIVSVYKIN-DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGS 538
           KLF D T  +ETIVSVYKIN  LS P+ RFKV +NA++N LTG +V+ DG+SV+VVEG  
Sbjct: 391 KLFGDPTTVVETIVSVYKINKKLSDPKTRFKVRMNAKQNILTGFSVMMDGMSVVVVEGKR 437

Query: 539 KSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMT 598
           K+I RY KLML+RINW  + K+++E++       NKC LVWQGSV K SF++F +QEC+T
Sbjct: 451 KAINRYEKLMLKRINWEEAEKKEDEEENGG----NKCCLVWQGSVEKPSFHRFHVQECLT 437

Query: 599 EAAARKIFADAGVGHYWDLAVNF 620
           ++ A+K+F DAGV HYWDLA+N+
Sbjct: 511 KSDAKKVFNDAGVAHYWDLALNY 437

[Close]

BLAST of Lag0040660 vs. TAIR 10
Match: AT3G56790.1 (RNA splicing factor-related )

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-14
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 381 PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD 440
           PPQP KLTKKE+KKL+T RR+AKEK++Q+MIRQ L EP K KVK+SNLMKVL SE ATQD
Sbjct: 144 PPQPFKLTKKEEKKLQTLRRVAKEKEKQKMIRQALFEPQKSKVKLSNLMKVLASELATQD 203

HSP 2 Score: 63.5 bits (153), Expect = 6.7e-10
Identity = 47/105 (44.76%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 127 NVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVL 186
           ++ +  TS    EAVKR QEL                       A D AV  K TK   L
Sbjct: 69  SIASDTTSSQILEAVKRFQEL-----------------------AIDTAVAHKQTKGFFL 128

Query: 187 RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQ-ILKP 231
           R+D LGREIDE G+V+      NLSTL VN NK KKD FQ ILKP
Sbjct: 129 RVDVLGREIDEYGHVI------NLSTLMVNNNKHKKDVFQNILKP 144

The following BLAST results are available for this feature:

BLAST of Lag0040660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139032.1	3.0e-302	91.27	protein RDM16 isoform X3 [Momordica charantia]	[more]
XP_022139033.1	3.0e-302	91.27	protein RDM16 isoform X4 [Momordica charantia]	[more]
XP_022139031.1	1.9e-301	90.34	protein RDM16 isoform X2 [Momordica charantia]	[more]
XP_022139030.1	1.9e-301	90.34	protein RDM16 isoform X1 [Momordica charantia]	[more]
KAG7030755.1	3.1e-299	90.16	Protein RDM16, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lag0040660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	1.6e-205	63.68	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
Q5ZJ85	1.1e-68	34.22	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=...	[more]
O43395	9.9e-67	33.02	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]
Q5R5F1	9.9e-67	33.02	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2...	[more]
Q2KIA6	1.3e-66	32.71	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 S...	[more]

BLAST of Lag0040660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCW0	1.4e-302	91.27	protein RDM16 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CEQ9	1.4e-302	91.27	protein RDM16 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CB57	9.3e-302	90.34	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CBF9	9.3e-302	90.34	protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1ILJ1	5.7e-299	89.84	protein RDM16-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477318 PE=4 S...	[more]

BLAST of Lag0040660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28060.1	1.1e-206	63.68	Pre-mRNA-splicing factor 3	[more]
AT3G55930.1	5.7e-94	48.31	Pre-mRNA-splicing factor 3	[more]
AT3G56790.1	1.5e-14	75.00	RNA splicing factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..66
None	No IPR available	COILS	Coil	Coil	coord: 385..407
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 27..623
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 493..616 e-value: 1.9E-41 score: 141.6
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 239..468 e-value: 1.4E-62 score: 211.3
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 27..623

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040660.1	Lag0040660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex