Lag0040647 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040647
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	60S ribosomal protein L35
Location	chr13: 6890823 .. 6892973 (+)
RNA-Seq Expression	Lag0040647
Synteny	Lag0040647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATGAGTTCGACATCGACATGCAGGGTGATTCGATGTTTCCATTATATCGTAAAGAAATTGATAAAAATATAAACAAAACAATAGCGCAAAATGTGACTAATGTAGAGATAATATTTATAATAATTATCTTAACTTGTGTTTTAAAATGTGAAACATTTGTTTCTTAATTTAAATATTTTTTTTGATTATTTGATTTTAAATATTTTTCCAGTAATATCCATCGATATCGACATTTTGTTGATATTTCCATCGACATTTCCATAAAATTGAGATCTCAACATTTCCGAAGACATCGACATTTTAATTCTTGTAATTAACGTACCAATGTTTCAAGGTTAATATCTCCTCTTAACAATGGGTTGTTAGAACAATGATTTATGGGTTCGAGAAGAAGGCTATGATTTTTGGGTTGTTAGAATGATGAAGATGCTGGGTTGGATAATAAAAATGCCGATTTAGATAATGAATATGTTTGATTTTTTTTTTGAAACTATGAATATGTTTGATTCGAGGATTAAAAATGGAAAATCTTAGTACACGAGTTTATCTTTAGGAATTCCAAACTTGAACAATGTAGTGGGCCAAACAATTATAGCCCAATCCCTATCGAATCCTCTACGTGGGCCAATCGGTAAAAGCCCAATCTATATCAAAGGCTCTTAATGGGCCAATATGTAAAAGCCCAATCCACGTCGAGAATCGGCCCACCCAATTGAGAGGAAAGAAATTACGGGCGTCTTAAATAGGTTTGATCTTCTTCAGTTTCTTCAAACTAGGGTTTTGCAAGTTGCAGACCTCCGCCGAATCCCAAACACACAACAGCCGGTCTCTGCTTACCAGATTCTAATGGGTAAATTCTTACGGATTCTCGTTAACAGAAGCTTTTTCTTATGATTTTCTTTGTTTCCGATGAACACTCATCGTTTGGATTGATTTTGTTTCTTCTTCCTCTTCGTTTTTTTAAAATTAATGTTGATGGATTTTTTGATTGAGCGCAGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCGAAGGCGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTCCGAGTCGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATGTACTTTGTTCTATCTTTCTACTGATTTCTTTTTTGTGTTTTGTATGTATGTATGTTGATTGGTTTTCTATATTTTGTTTGGGTTTTTTGTTGCGATGTTTATGGTGTTTGTTTCGGTGGTTCTTGATTCCAGTAAGGTGGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGGCGGCTCTGAGGGAAGCATACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGTCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAAGTAAGCGCTTTCTTCATTTGAATCTATTCATTTTCATATTATTATTCATTCCGCTGCTACTATATTTATCTTTGTGCTTAAATTTCTGCTTGTGCACAATGCTGGTTAGTTCATGAATTTGCTTCCTTTGTTGAATGGTTAAGGATTTTGTTGTGTGGTATGGTTTAGTTTCCAATTTTAGTGTCGTATTTCCATTGAAGCTTCGTGTTTATAGTATGTGTACAAATTGATTTACCACATTGGCCATTTATTCAACTCTTCTTTGCTTTAGTCAGTCTGGGATTGTCGAGCCACTGCAATTTTAAAAGTTAAACGAGACTTAAAAAATTGAATTTAATAGAATGGTGTGGGAAGTAAGCTTTAGTAACCAGAATAATGCTCGAAGCCTTTGAAGCCCAGCTATTTTCCATCTCTTAGTTTTTCCAACACAACCCTCAACTTTTCTGCCTTGTTGAGATTGAGAATATATGTATTTCACACGATAACTCAATTTTTCTATGCTGGGTGTTGATTTTCTTGAATTGTATGTATTGTTTAAGCCATTGCTATTCCGGCTGTAAATATTTTGAAGTGCAGTGAACAGTGTAGACTGTCTTTCTAGTTTCTTCCTCATTCTAATTTGACGCACTTGTACTTTGTTTTACAGGCATCGCTAAAGACCGAGCGACAGAAGAAGAAAGAGATGTATTACCCATTGAGGAAGTACGCCATTAAGGTGTAG

mRNA sequence

ATGTCCATGAGTTCGACATCGACATGCAGGTTTCTTCAAACTAGGGTTTTGCAAGTTGCAGACCTCCGCCGAATCCCAAACACACAACAGCCGGTCTCTGCTTACCAGATTCTAATGGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCGAAGGCGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTCCGAGTCGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTGGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGGCGGCTCTGAGGGAAGCATACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGTCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAAGCATCGCTAAAGACCGAGCGACAGAAGAAGAAAGAGATGTATTACCCATTGAGGAAGTACGCCATTAAGGTGTAG

Coding sequence (CDS)

ATGTCCATGAGTTCGACATCGACATGCAGGTTTCTTCAAACTAGGGTTTTGCAAGTTGCAGACCTCCGCCGAATCCCAAACACACAACAGCCGGTCTCTGCTTACCAGATTCTAATGGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCGAAGGCGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTCCGAGTCGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTGGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGGCGGCTCTGAGGGAAGCATACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGTCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAAGCATCGCTAAAGACCGAGCGACAGAAGAAGAAAGAGATGTATTACCCATTGAGGAAGTACGCCATTAAGGTGTAG

Protein sequence

MSMSSTSTCRFLQTRVLQVADLRRIPNTQQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV

Homology

[Close]

BLAST of Lag0040647 vs. NCBI nr
Match: KAG7031634.1 (60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 26  PNTQQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKI 85
           P T QPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKI
Sbjct: 11  PKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKI 70

Query: 86  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQ 145
           KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+
Sbjct: 71  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERE 130

Query: 146 KKKEMYYPLRKYAIKV 162
           KKKEMYYPLRKYAIKV
Sbjct: 131 KKKEMYYPLRKYAIKV 146

[Close]

BLAST of Lag0040647 vs. NCBI nr
Match: KAG6601021.1 (Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 26   PNTQQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKI 85
            P T QPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKI
Sbjct: 1222 PKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKI 1281

Query: 86   KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQ 145
            KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+
Sbjct: 1282 KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERE 1341

Query: 146  KKKEMYYPLRKYAIKV 162
            KKKEMYYPLRKYAIKV
Sbjct: 1342 KKKEMYYPLRKYAIKV 1357

[Close]

BLAST of Lag0040647 vs. NCBI nr
Match: XP_022134532.1 (60S ribosomal protein L35 [Momordica charantia])

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-52
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 39  MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 98
           MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 99  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 158
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMY+PLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPLRKYA 120

Query: 159 IKV 162
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Lag0040647 vs. NCBI nr
Match: XP_022939961.1 (60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal protein L35 [Cucurbita moschata] >XP_022991739.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_022993735.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_023523288.1 60S ribosomal protein L35 [Cucurbita pepo subsp. pepo] >KAG6578726.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016256.1 60S ribosomal protein L35 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215.7 bits (548), Expect = 2.9e-52
Identity = 121/123 (98.37%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 39  MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 98
           MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 99  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 158
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYA 120

Query: 159 IKV 162
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Lag0040647 vs. NCBI nr
Match: XP_038891782.1 (60S ribosomal protein L35-like [Benincasa hispida])

HSP 1 Score: 215.3 bits (547), Expect = 3.8e-52
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 39  MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 98
           MARIKVHELRQKSK DLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 99  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 158
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 159 IKV 162
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Lag0040647 vs. ExPASy Swiss-Prot
Match: Q9M5L0 (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 39  MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 98
           MARIKVHELRQK+KA+LL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 99  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 158
           ISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ SLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKKEMYFPMRKYA 120

Query: 159 IKV 162
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Lag0040647 vs. ExPASy Swiss-Prot
Match: O80626 (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.2e-50
Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 39  MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 98
           MARIKVHELR+KSKADL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 99  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 158
           ISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 159 IKV 162
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Lag0040647 vs. ExPASy Swiss-Prot
Match: Q9SF53 (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.9e-50
Identity = 111/123 (90.24%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 39  MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 98
           MARIKVHELR+KSK+DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 99  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 158
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 159 IKV 162
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Lag0040647 vs. ExPASy Swiss-Prot
Match: Q9LZ41 (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.3e-50
Identity = 111/123 (90.24%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 39  MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 98
           MARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 99  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 158
           ISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120

Query: 159 IKV 162
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of Lag0040647 vs. ExPASy Swiss-Prot
Match: Q9M3D2 (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.4e-49
Identity = 110/123 (89.43%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 39  MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 98
           MARIKVHELR KSK+DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 99  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 158
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 159 IKV 162
           IKV
Sbjct: 121 IKV 123

The following BLAST results are available for this feature:

BLAST of Lag0040647 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031634.1	1.6e-58	97.06	60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601021.1	1.6e-58	97.06	Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022134532.1	1.7e-52	99.19	60S ribosomal protein L35 [Momordica charantia]	[more]
XP_022939961.1	2.9e-52	98.37	60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal pro...	[more]
XP_038891782.1	3.8e-52	98.37	60S ribosomal protein L35-like [Benincasa hispida]	[more]

BLAST of Lag0040647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5L0	3.4e-51	91.87	60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1	[more]
O80626	2.2e-50	91.06	60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1	[more]
Q9SF53	4.9e-50	90.24	60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1	[more]
Q9LZ41	8.3e-50	90.24	60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1	[more]
Q9M3D2	2.4e-49	89.43	60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 52..72
None	No IPR available	GENE3D	6.10.250.3450		coord: 116..161 e-value: 6.4E-22 score: 79.5
None	No IPR available	PANTHER	PTHR45722:SF8	60S RIBOSOMAL PROTEIN L35-4	coord: 31..161
None	No IPR available	CDD	cd00427	Ribosomal_L29_HIP	coord: 46..102 e-value: 1.14117E-12 score: 57.4975
IPR001854	Ribosomal protein L29/L35	PFAM	PF00831	Ribosomal_L29	coord: 46..102 e-value: 2.0E-17 score: 62.9
IPR001854	Ribosomal protein L29/L35	TIGRFAM	TIGR00012	TIGR00012	coord: 46..102 e-value: 2.1E-18 score: 64.0
IPR001854	Ribosomal protein L29/L35	HAMAP	MF_00374	Ribosomal_L29	coord: 42..102 score: 12.972131
IPR036049	Ribosomal protein L29/L35 superfamily	GENE3D	1.10.287.310		coord: 39..115 e-value: 2.8E-35 score: 122.5
IPR036049	Ribosomal protein L29/L35 superfamily	SUPERFAMILY	46561	Ribosomal protein L29 (L29p)	coord: 42..103
IPR045059	60S ribosomal protein L35	PANTHER	PTHR45722	60S RIBOSOMAL PROTEIN L35	coord: 31..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040647.1	Lag0040647.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome