Lag0040609 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACATGATGCAATTTTCCACCATTATCGATCTCAATCACTTTGGATATGGAATCGTTTCTTCTCGCCTTGCCCTAAAGGTATTCGTTCAGTCTGTTTTTGTTGCATTTGTTTCCCTCATTCTCTACTCTCTGTGCATTTCTCTATAATCGGCGGCTCTTTGGCCCTGTTTTTTGTGGCATTTGAGTTGGATGATGATTTTTGAACTTTGTGTCTGTGTTGTGATGAATTGCTGTGGAACGATTTTTTTTTTTTGTTCTTTTGTTTGTTTTTCTTGTGGTTGGATGAATGTGAGTGAAAGTGATACTACAGTGAAGTTTTGGAACTTCGATTTTGTCACTTGTGTTTTTTCTATGTGTATGATTTTGTTGCATGTTGTATCAGGTGAAAGGATCTTTGAGATCTGTTTGGGCGATTTTCGGAAAATTAGCTTACAGGAAGAGGAAGACGATGTTGCCTGGTCTACCTGGAAATGGAAGAGGTGAGGAATTGAATACTGATTTCTGTTTCTTCTTTGTACTTTGGCCTCTGCTGCTTTACATCATGCAACAGAGTAACATGAAATTGGATGGCTGTTGAAGTTCCTTGATATTGAATGCTTCATTTCTATTAGTTCTAACTTGACGAAGATAATTTTGCAGAACGATAATTCCTGCGCGCGCTTGCGGAAGTATGATATGTATTGCATATTTTGACCTGGACATAAATCACGTTTTCTTGCATTGATTGAAAAAATATGTAATAAAATTTTGAAGTAAAAATTTTAGGTATCGAGAAATTTTGACCAGATACAAAAATTCCTCAGGAGAAATTGTTTTTAATTCGACGAGTCTTAGAAATATAACTTGTTTATAATTACTAATTATGAAGTTTGTTGGTGGGTTATTGCAAAGAACAAGTTAATCAAGTCAAGGATTTCCAATTATTTTCTCCTGAGGTTGATCGTATTATCCTGTTTACACTCTCCATGAGCTTTTTTCCTACTGAAGTTTTAGTTGATTTTCTGCCATTGCTTTTGTTAGCTGATTACGAGGCGGCCTGGGATGATTTTTTCTGCCCACAAAGAGGAAATATGTCTCATCAAATGGTGAATGATGCAGTCCATCAAGAAAAAGCGTTCATCATCTCCACCCCCGGCATGTCACCTTCGACCCTCTTGGAGGAGGTAACAGAATCTGATCGTGAGAATGCCATATGTTGTGTTAGTCCTCTTCAACGTTTGATTAAAGTGGTTTGTTCGAAAATGTTTTTCAGTTTCATTTCTTTTTAGTTCAAGTTTTATGTACATTATTAAAATTATATCCTTGCTAAATCTCAGGTAAACGTAATGTCACCTAAAGCATTAAGTGCTTCTGTTAGTGACATAAGTTCTCTTGTGTGTATGACTGATAGAGTTTCTTCATCAGCGCCCCTCAACAAGTCCAAAGCTGCAATTGGTGGGGATTTGGTGGGTGCAGTTGAATCTCGTCTGAGAAGAAACTGTTCAAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGAAACTACAGGAGTGCCAGGATGTATGCCAGCTCCAGACGTTTGATGGATTGTGAAGGTTTTGACTTGAATTCAATATTTACACAAACATCAAGAGTCGAGGTGCGTGACCGACCATCAATCTGGTTTATCTATGATTATTAGAGCTTGAAAAGGTCAAATTGTGTGAGTGAACAAATAAATGCATCTCAGCAAATATGATCGTTAACGTTGCTATTTAGTAATAATATTATGAGCTTAATTTGATAATTTTCCTAAAAATTCTGTTTAATTAATTTGAGAAAATTAAATGTGAAGCACTTTACTCATGAATGTGGAATTAGCTTTACACCTCAAAGGAGTTTAACAAGATCTATTGATGATAATGTTGACTAGATCCTCTATATTATTTGATATGCCTTGACTATTAATGCCTAGAATTGGAACAAGATTGAATAATATGTATGATATTACAAAACTGGTCAATTATAATTTATAACAACTACCCTGTTCAACTTCGAATAGATTCTTTATAAACTTCCTATTAACGACATATTTCATTGATATTTTTTTCAAATACTTCTGCTCATATAGACTCCCGAACATTTGCATTGGCATGGGTTCTCATTGCCAGTCAAGCAATCTTTATTAGAAGAAATTAGGAGGATAAATGAGCAGCTGATTGATACAGTGGTGTCTATTTGTGACAAAGATATGAGAACAACTGATACTACAGCTACAATTGACAGAAGTGAAGGGATCACAGTCGAGTGTTCCTTTGTTGCTATGCACACCAATTCAAATTTAATCTCACAGCAAACTCCAGTCCTTCAGGTACTTAAGCCCATTTATTTTTATTACGATCCATCATTTATAGGTATAATTACTTGCTCCACATTTCTTATTTTATTCATTATGACATGCAGTTGGCAGTGCATCCCTTAAAGTTGCTAGTTCCCAAAGGCTATCCACACATTTCTCCAATATTCAAGAAATTCCATGTGGAAGATTGGTAAGAATATTTATCCTTTTTCCCATTTTTAATTGCACGAATCTGCCTATATGTCCACCATATGATTCGAGCTTTTATATTTGAGGTTCATTTTTCCCTTTGCAATTACACTACAATCCTTCATTTGATGCTGGCTTTTTTGCTATTCATGCATTGTCGAGTCCTGTTGCTCATAGCAGATATTATTAGACGAGCCTTTTTAAAAATTTTCTTGTTTATTAGATTCATATTTTATGAAATCTTATTAACTTCTGGGAATTACCAGGAATGCCAAAGGGCGTACACACAAGAATGTCCTTCTCTGCTAACCCACAATTATTCAAGATGAACAAACCTTCTCCTTAAAGGATAATTATGAATAGGTGTATGTATGGAAGAAAATCAAAATCAATTAATATCCAAATCTATGGTGTACATCTAAAGAAAGATGTTGAATATGAGTTAGGACATTACCAAAGTGATTTTGGTAATTTTAAAATCATTTCCAAACATGTCCTTAGGTAACTCTGTCGATTTGTAGAATAACATAAAAGAAGGGGCAATAACTTGATTAATGTTAGATCTTAGTCCTTTCTATAATCTCTTAGAATCAATAGGTTAGTATGTATTTTTGCAGATTACAGAAGTTTGTAAGCCACAATTAGATCACCCAATATGTTCATTGAATAGCCACAATATAATTACCAAGTTACCTAGTTGTATGTCAATTCCAAATATGTCCAGAAGTGTTTTGTAAGGGTATTAGTATGTATATTTGGGGAATAGTATTAGAAGGGGAGTAAGGGTATAATAGTAAATAGCTAGGGAACCTTGGGTGTGCCTTGGTTATAAATAGGGTCGTTTATGGAGCCTTTAGGGTGTGGAGAATTTTGGTATTGTCTCATAGTGGGACTTGGGAGAGATTTAGCCCTCTCGAAAGGCTATCGGTTTTATATTGTAACTTCGTTTTGATATTGCAATATAATATATTAGTGTTTGGTGTCTTTTCTTAGTTTGGATACCTAACATGTTTCTAATGGGAACTTTACTTATAAGTCATAGGTCGATCGACTTTTAGGCTATGACTAAAACATAATTCTCATGTTATCCAGTTATAAATTAATTTCTAATAGTTTCAATAAGTATCTTTAATGGGAACCTTACAACGAATTCATAGGTCATTCAACTTTCCATTTTCAAGGATCCCAAACCATTACACGTTTAATCCTTTAACAATCCTTTAACTTATAAACTCACTTGTTTGCAGTCCAACAGATTGTGAAGACCTTTCATTGAAGGCAAGGGAAAAGTTCAACATGTCTGTTAGAAGCCTTCCACATCCATTCACGATAAGCGAAGTGGCCAGGACATGGGACGTGTGCGCTCGAGAAGTCGTTTCGGAGTATGCTGAACGCAATGGCGGTGGCAGTTTCAGTTCAAAATATGGCTCTTGGGAGGACTGTCTTCATGCTGCTTGGTCATAA ATGAACATGATGCAATTTTCCACCATTATCGATCTCAATCACTTTGGATATGGAATCGTTTCTTCTCGCCTTGCCCTAAAGGTGAAAGGATCTTTGAGATCTGTTTGGGCGATTTTCGGAAAATTAGCTTACAGGAAGAGGAAGACGATGTTGCCTGGTCTACCTGGAAATGGAAGAGCTGATTACGAGGCGGCCTGGGATGATTTTTTCTGCCCACAAAGAGGAAATATGTCTCATCAAATGGTGAATGATGCAGTCCATCAAGAAAAAGCGTTCATCATCTCCACCCCCGGCATGTCACCTTCGACCCTCTTGGAGGAGGTAACAGAATCTGATCGTGAGAATGCCATATGTTGTGTTAGTCCTCTTCAACGTTTGATTAAAGTGGTAAACGTAATGTCACCTAAAGCATTAAGTGCTTCTGTTAGTGACATAAGTTCTCTTGTGTGTATGACTGATAGAGTTTCTTCATCAGCGCCCCTCAACAAGTCCAAAGCTGCAATTGGTGGGGATTTGGTGGGTGCAGTTGAATCTCGTCTGAGAAGAAACTGTTCAAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGAAACTACAGGAGTGCCAGGATGTATGCCAGCTCCAGACGTTTGATGGATTGTGAAGGTTTTGACTTGAATTCAATATTTACACAAACATCAAGAGTCGAGACTCCCGAACATTTGCATTGGCATGGGTTCTCATTGCCAGTCAAGCAATCTTTATTAGAAGAAATTAGGAGGATAAATGAGCAGCTGATTGATACAGTGGTGTCTATTTGTGACAAAGATATGAGAACAACTGATACTACAGCTACAATTGACAGAAGTGAAGGGATCACAGTCGAGTGTTCCTTTGTTGCTATGCACACCAATTCAAATTTAATCTCACAGCAAACTCCAGTCCTTCAGTTGGCAGTGCATCCCTTAAAGTTGCTAGTTCCCAAAGGCTATCCACACATTTCTCCAATATTCAAGAAATTCCATGTGGAAGATTGTCCAACAGATTGTGAAGACCTTTCATTGAAGGCAAGGGAAAAGTTCAACATGTCTGTTAGAAGCCTTCCACATCCATTCACGATAAGCGAAGTGGCCAGGACATGGGACGTGTGCGCTCGAGAAGTCGTTTCGGAGTATGCTGAACGCAATGGCGGTGGCAGTTTCAGTTCAAAATATGGCTCTTGGGAGGACTGTCTTCATGCTGCTTGGTCATAA ATGAACATGATGCAATTTTCCACCATTATCGATCTCAATCACTTTGGATATGGAATCGTTTCTTCTCGCCTTGCCCTAAAGGTGAAAGGATCTTTGAGATCTGTTTGGGCGATTTTCGGAAAATTAGCTTACAGGAAGAGGAAGACGATGTTGCCTGGTCTACCTGGAAATGGAAGAGCTGATTACGAGGCGGCCTGGGATGATTTTTTCTGCCCACAAAGAGGAAATATGTCTCATCAAATGGTGAATGATGCAGTCCATCAAGAAAAAGCGTTCATCATCTCCACCCCCGGCATGTCACCTTCGACCCTCTTGGAGGAGGTAACAGAATCTGATCGTGAGAATGCCATATGTTGTGTTAGTCCTCTTCAACGTTTGATTAAAGTGGTAAACGTAATGTCACCTAAAGCATTAAGTGCTTCTGTTAGTGACATAAGTTCTCTTGTGTGTATGACTGATAGAGTTTCTTCATCAGCGCCCCTCAACAAGTCCAAAGCTGCAATTGGTGGGGATTTGGTGGGTGCAGTTGAATCTCGTCTGAGAAGAAACTGTTCAAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGAAACTACAGGAGTGCCAGGATGTATGCCAGCTCCAGACGTTTGATGGATTGTGAAGGTTTTGACTTGAATTCAATATTTACACAAACATCAAGAGTCGAGACTCCCGAACATTTGCATTGGCATGGGTTCTCATTGCCAGTCAAGCAATCTTTATTAGAAGAAATTAGGAGGATAAATGAGCAGCTGATTGATACAGTGGTGTCTATTTGTGACAAAGATATGAGAACAACTGATACTACAGCTACAATTGACAGAAGTGAAGGGATCACAGTCGAGTGTTCCTTTGTTGCTATGCACACCAATTCAAATTTAATCTCACAGCAAACTCCAGTCCTTCAGTTGGCAGTGCATCCCTTAAAGTTGCTAGTTCCCAAAGGCTATCCACACATTTCTCCAATATTCAAGAAATTCCATGTGGAAGATTGTCCAACAGATTGTGAAGACCTTTCATTGAAGGCAAGGGAAAAGTTCAACATGTCTGTTAGAAGCCTTCCACATCCATTCACGATAAGCGAAGTGGCCAGGACATGGGACGTGTGCGCTCGAGAAGTCGTTTCGGAGTATGCTGAACGCAATGGCGGTGGCAGTTTCAGTTCAAAATATGGCTCTTGGGAGGACTGTCTTCATGCTGCTTGGTCATAA MNMMQFSTIIDLNHFGYGIVSSRLALKVKGSLRSVWAIFGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVEDCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS Homology
BLAST of Lag0040609 vs. NCBI nr
Match: XP_022138947.1 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Momordica charantia]) HSP 1 Score: 553.5 bits (1425), Expect = 1.5e-153 Identity = 276/360 (76.67%), Postives = 305/360 (84.72%), Query Frame = 0
BLAST of Lag0040609 vs. NCBI nr
Match: KAG6601093.1 (Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 525.8 bits (1353), Expect = 3.4e-145 Identity = 276/373 (73.99%), Postives = 307/373 (82.31%), Query Frame = 0
BLAST of Lag0040609 vs. NCBI nr
Match: XP_022984739.1 (mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita maxima]) HSP 1 Score: 525.8 bits (1353), Expect = 3.4e-145 Identity = 275/373 (73.73%), Postives = 306/373 (82.04%), Query Frame = 0
BLAST of Lag0040609 vs. NCBI nr
Match: XP_022956517.1 (mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita moschata] >XP_022956518.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita moschata]) HSP 1 Score: 525.4 bits (1352), Expect = 4.4e-145 Identity = 276/373 (73.99%), Postives = 306/373 (82.04%), Query Frame = 0
BLAST of Lag0040609 vs. NCBI nr
Match: XP_023526658.1 (mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita pepo subsp. pepo] >XP_023526666.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 524.6 bits (1350), Expect = 7.5e-145 Identity = 275/373 (73.73%), Postives = 306/373 (82.04%), Query Frame = 0
BLAST of Lag0040609 vs. ExPASy Swiss-Prot
Match: F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.4e-47 Identity = 130/349 (37.25%), Postives = 196/349 (56.16%), Query Frame = 0
BLAST of Lag0040609 vs. ExPASy Swiss-Prot
Match: Q9SHV7 (Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis thaliana OX=3702 GN=MED15C PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30 Identity = 100/301 (33.22%), Postives = 158/301 (52.49%), Query Frame = 0
BLAST of Lag0040609 vs. ExPASy Swiss-Prot
Match: F4I169 (Probable mediator of RNA polymerase II transcription subunit 15b OS=Arabidopsis thaliana OX=3702 GN=MED15B PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.2e-09 Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 0
BLAST of Lag0040609 vs. ExPASy TrEMBL
Match: A0A6J1CCM7 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010000 PE=4 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 7.3e-154 Identity = 276/360 (76.67%), Postives = 305/360 (84.72%), Query Frame = 0
BLAST of Lag0040609 vs. ExPASy TrEMBL
Match: A0A6J1JBE6 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita maxima OX=3661 GN=LOC111482923 PE=4 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 1.6e-145 Identity = 275/373 (73.73%), Postives = 306/373 (82.04%), Query Frame = 0
BLAST of Lag0040609 vs. ExPASy TrEMBL
Match: A0A6J1GWK1 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita moschata OX=3662 GN=LOC111458234 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 2.1e-145 Identity = 276/373 (73.99%), Postives = 306/373 (82.04%), Query Frame = 0
BLAST of Lag0040609 vs. ExPASy TrEMBL
Match: A0A6J1CEI3 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010000 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 9.7e-114 Identity = 215/289 (74.39%), Postives = 239/289 (82.70%), Query Frame = 0
BLAST of Lag0040609 vs. ExPASy TrEMBL
Match: A0A5B6ZEQ7 (Putative mediator of RNA polymerase II transcription subunit 15a (Fragment) OS=Davidia involucrata OX=16924 GN=Din_011975 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 2.9e-65 Identity = 166/355 (46.76%), Postives = 214/355 (60.28%), Query Frame = 0
BLAST of Lag0040609 vs. TAIR 10
Match: AT1G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). ) HSP 1 Score: 190.7 bits (483), Expect = 2.4e-48 Identity = 130/349 (37.25%), Postives = 196/349 (56.16%), Query Frame = 0
BLAST of Lag0040609 vs. TAIR 10
Match: AT2G10440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). ) HSP 1 Score: 135.6 bits (340), Expect = 9.1e-32 Identity = 100/301 (33.22%), Postives = 158/301 (52.49%), Query Frame = 0
BLAST of Lag0040609 vs. TAIR 10
Match: AT2G10440.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). ) HSP 1 Score: 132.9 bits (333), Expect = 5.9e-31 Identity = 102/300 (34.00%), Postives = 155/300 (51.67%), Query Frame = 0
BLAST of Lag0040609 vs. TAIR 10
Match: AT1G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 4.4e-10 Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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