Lag0040584 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040584
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	18S rRNA aminocarboxypropyltransferase
Location	chr13: 6245142 .. 6247828 (-)
RNA-Seq Expression	Lag0040584
Synteny	Lag0040584

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGAGAGCAATGGAAGCTTATATGGTTGCCTGTGGAAATTCAGTGTGATTACTATGGGTGTTTGTGGAAGCTTTGGGATTTGTGATGCGGAAACGTCTCCAATTTGCAGCTGTATAAAAGGGGTTTAAGCCAAAGCATGGAAGAGGAATGAAATCGAGGAATATGGAGTGGTGGGTGTGTGAGAAATACGCTATTGAAGTGTGAGAATCCGAGCAATAATAACGCCAGCATTCAGGACGAAGATGGGTTTTTAAAAATAGAAATGGTTAAAGTGCCAGATTTTGCAAAGGTTCAATTCCTCTACTTCAGCAGATGATTGCAGACGTGAGTGCTTGAAGAATTGCTCGTGTACTGCTTAAGCATTTGATCAGGGTATTGGCTGCATGCTATGGAGTAGAGACTTGGTTGATATACAAAAGTTCACCAACGGTGGAGCAGACTTAGATTATTCAAGTACACTCTCACTAAACTTGTATTTCAATTTTTCACCGAAATAATTATATTTCTTAATTTCCAAACTAAGTATGCGTTTAATTTTTCTTTCGTTTATAGATGAATCTGCAAAAGACAAGAAAGGAGTTATTATAACAATAGTGCTACCCGTAACGCTAATTACCATCTTCATCATTGCTATATCCTTCTGGCGCAAATGGAAGACCAAAGGTAACACATCGATCCACAAAAAGATCAAGGCTCTGTTTGGACCTTGGAAAGACTTTTTAGGACACTTAAAATACTATTTTTAAAAGCTTAGAAAATTATTTCCTAATTATGTCTTGTAACATCATACGTACTTCAATTCTTTCCCATTTTCTTGATTGGTAAGATAGTCATATGATTTATTGATAGTTTTGTAACACATTTGAGGTCTATAACAGAGAAGATATTCTTTTTAAGGTTGGTCAGGGGGACTTTGGTCCAGTATAAAAAGTTAGGTAGTAGTTATTACATATTCTTTTTGTTCATTAATCTACTCTGCAAAATTTTGTCATACATAATGGTGTTAAAAAAATCTCATTGTAGATCAACTCATCATCTAGGATTTGTTAGCTGTTGTACGTCTTTCGTTATAGTATACTGTTCTGCTTTTTGAAGGTTTTCTCTTTGTTGTGGACCATAACTGTGCTCATATTCAGAAATATAAAGTTTTAAGACCTCGTGTACGTGGGTGGGTGAGTAAGTCCACACACCAAACCATAAAAAACCCAAATCTCATGCATATAAAAAAGAATCAAAGATGTTGATTTTTTATATGGAAATTCCTTAATTGGCAGGCCTGAGTCCAAGTTCCTCCAAGATGTTGTAAAAGAAATTTTAAAGAAGTTAAACCACACATTTCTATATATCGCCAAGTATCCAGTTGGATTGGAATGTTGCCGATCATCTTCATGGAAACCGAGCAAGACCCCATGAGCTTCCATGGTATACAAGGTTGAAAATTGCCATAAAGACTGCAAGTGCTGATCTGGCTTTTCTCAATTCTCCATGCTTCTGAGATCATCGACCGTGATGTTAAAACCAGCAACATTCTCCTTGACAACAACTTCAATGTCAAAGTTACCAACTTGTAAGTTTTATTTATGTCTAATATAACATTTAATTTTTAAAAAATGTTGAATGCATGAGTTAAGGACCTATTGAATACAAAATTAAAACTCTATGGATCTACTAGACACAAAATTAAAAATTCAAAGACTTATTAGACATTTTTTAAAGTTTAGGAACCACATATAGTAGACACACAAATCTAGTTTGATGTTAACTTTTTCACAATAATAATAATAAATTCTCTTGCTAACCTTCATTCTCTATAAATTTTGGAAGCATATTCACATTGTGCCTTCTCTTGACTAGATTTTTTTAAAAATAAAATTTGATAAAAAATTAACTAATTTGAATGTTCTAATTTGTTAAATTTCTACCACTTCACGCCAACATACAGAATTGTGAAGTTGTTTGTTTTATAGTTTTTTTTGGTCAGTTTGGTTCTTATTTTAAGGTTCAAAGAAAAATCATTATTATTTTTGCTAATGTAGTGACTAACAAACCTCTAGATTTCGCCCAGGAGCCTTAAGCAACTTAGACTTATCACTTGCTTGTGAATTGTTATTATTTAAGCTTTTTCGATGTCGATGCTTTGCTAATTTCTATTTGTATATGACACAGGGAGCTTCTAAAACAATACCCAGCATGCGAGAATAGTGCTGATATTATTTTGGTGCTGAATGCTTGGTTATCACAACAAAAGCCAGGTTCCCAAGGAACTGGATAATGTAGAATGTATTCTCTTGAATTAATTGCATCAATCTCTTGTTTTAATTTGTCTTGGACCTTGATTCGAAGAAAATGGAGTTGTCTAGTGTTTGTATGAAAACGACCAAAACTGACAAAAGGAAACCACCAAACCGATCAAGATCAAACCGAGTCGATTGAAACCAATAATATCTAACCAAGCCAAATTGATTGACTATTTGTTCAAATTTGCATTTTAGAAAACTAAACCAATGTAGCTAGACTTTTGATTTGGATGTAGAGTCATTTTCCAACAATGGGAAGGACTTGTTAAGAATAGGATTTAACTTGAACTAGTGATGGTTTTGATGTTGCAGGTGTAGAGAAGTCATCTGTGAGCGAAGATGACGACGGTTTCGATGATTCGGCCGATGGACTTCTGCCATTGTAG

mRNA sequence

ATGCAGGAGAGCAATGGAAGCTTATATGGTTGCCTGTGGAAATTCAGTGTGATTACTATGGGTGTTTGTGGAAGCTTTGGGATTTGTGATGCGGAAACGTCTCCAATTTGCAGCTGTATAAAAGGGGGTATTGGCTGCATGCTATGGAGTAGAGACTTGGTTGATATACAAAAGTTCACCAACGGTGGAGCAGACTTAGATTATTCAAATGAATCTGCAAAAGACAAGAAAGGAGTTATTATAACAATAGTGCTACCCGTAACGCTAATTACCATCTTCATCATTGCTATATCCTTCTGGCGCAAATGGAAGACCAAAGGTTTTCTCTTTGTTGTGGACCATAACTGTGCTCATATTCAGAAATATAAAGTTTTAAGACCTCGTGTACGTGGACTGCAAGTGCTGATCTGGCTTTTCTCAATTCTCCATGCTTCTGAGATCATCGACCGTGATGTTAAAACCAGCAACATTCTCCTTGACAACAACTTCAATGTCAAAGTTACCAACTTGGAGCTTCTAAAACAATACCCAGCATGCGAGAATAGTGCTGATATTATTTTGGTGCTGAATGCTTGGTTATCACAACAAAAGCCAGGTGTAGAGAAGTCATCTGTGAGCGAAGATGACGACGGTTTCGATGATTCGGCCGATGGACTTCTGCCATTGTAG

Coding sequence (CDS)

ATGCAGGAGAGCAATGGAAGCTTATATGGTTGCCTGTGGAAATTCAGTGTGATTACTATGGGTGTTTGTGGAAGCTTTGGGATTTGTGATGCGGAAACGTCTCCAATTTGCAGCTGTATAAAAGGGGGTATTGGCTGCATGCTATGGAGTAGAGACTTGGTTGATATACAAAAGTTCACCAACGGTGGAGCAGACTTAGATTATTCAAATGAATCTGCAAAAGACAAGAAAGGAGTTATTATAACAATAGTGCTACCCGTAACGCTAATTACCATCTTCATCATTGCTATATCCTTCTGGCGCAAATGGAAGACCAAAGGTTTTCTCTTTGTTGTGGACCATAACTGTGCTCATATTCAGAAATATAAAGTTTTAAGACCTCGTGTACGTGGACTGCAAGTGCTGATCTGGCTTTTCTCAATTCTCCATGCTTCTGAGATCATCGACCGTGATGTTAAAACCAGCAACATTCTCCTTGACAACAACTTCAATGTCAAAGTTACCAACTTGGAGCTTCTAAAACAATACCCAGCATGCGAGAATAGTGCTGATATTATTTTGGTGCTGAATGCTTGGTTATCACAACAAAAGCCAGGTGTAGAGAAGTCATCTGTGAGCGAAGATGACGACGGTTTCGATGATTCGGCCGATGGACTTCTGCCATTGTAG

Protein sequence

MQESNGSLYGCLWKFSVITMGVCGSFGICDAETSPICSCIKGGIGCMLWSRDLVDIQKFTNGGADLDYSNESAKDKKGVIITIVLPVTLITIFIIAISFWRKWKTKGFLFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFSILHASEIIDRDVKTSNILLDNNFNVKVTNLELLKQYPACENSADIILVLNAWLSQQKPGVEKSSVSEDDDGFDDSADGLLPL

Homology

[Close]

BLAST of Lag0040584 vs. NCBI nr
Match: XP_038896612.1 (18S rRNA aminocarboxypropyltransferase [Benincasa hispida])

HSP 1 Score: 81.6 bits (200), Expect = 9.1e-12
Identity = 62/147 (42.18%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 104 KTKGFLFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEI 163
           K KG L VVD + A +     ++ R    ++L WL +                 L A+ I
Sbjct: 104 KQKG-LAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALI 163

Query: 164 IDRDVKTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK------- 223
           I  + +T+++LL            N ELLKQY ACENSADII V NAWLSQQ+       
Sbjct: 164 ICGEGETADLLLSKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPH 223

[Close]

BLAST of Lag0040584 vs. NCBI nr
Match: XP_022984901.1 (ribosome biogenesis protein TSR3 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 79.3 bits (194), Expect = 4.5e-11
Identity = 59/142 (41.55%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 109 LFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEIIDRDV 168
           L VVD + A +     ++ R    ++L WL +                 L A+ II  + 
Sbjct: 108 LAVVDCSWARLGDVPFVKLRCGAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEG 167

Query: 169 KTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK---------PGV 223
           +T+++LL            N ELLKQY ACENSADII V NAWLSQQ+          G 
Sbjct: 168 ETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPRIVEGA 227

[Close]

BLAST of Lag0040584 vs. NCBI nr
Match: XP_023551798.1 (ribosome biogenesis protein TSR3 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.3 bits (194), Expect = 4.5e-11
Identity = 59/142 (41.55%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 109 LFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEIIDRDV 168
           L VVD + A +     ++ R    ++L WL +                 L A+ II  + 
Sbjct: 108 LAVVDCSWARLGDVPFVKLRCGAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEG 167

Query: 169 KTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK---------PGV 223
           +T+++LL            N ELLKQY ACENSADII V NAWLSQQ+          G 
Sbjct: 168 ETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPRVLEGA 227

[Close]

BLAST of Lag0040584 vs. NCBI nr
Match: XP_022929250.1 (ribosome biogenesis protein TSR3 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-10
Identity = 58/142 (40.85%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 109 LFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEIIDRDV 168
           L VVD + A +     ++ R    ++L WL +                 L A+ II  + 
Sbjct: 108 LAVVDCSWARLGDVPFVKLRCGAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEG 167

Query: 169 KTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK---------PGV 223
           +T+++LL            N ELLKQY ACENSADII V N+WLSQQ+          G 
Sbjct: 168 ETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNSWLSQQRQVPKEPRVLEGA 227

[Close]

BLAST of Lag0040584 vs. NCBI nr
Match: KAE8637569.1 (hypothetical protein CSA_017846 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-10
Identity = 60/147 (40.82%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 104 KTKGFLFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEI 163
           K KG L VVD + A +     ++ R    ++L WL +                 L A+ I
Sbjct: 40  KQKG-LAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALI 99

Query: 164 IDRDVKTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK------- 223
           I  + +T+++LL            N ELLKQY ACENSADII V NAWLSQQ+       
Sbjct: 100 ICGEGETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPH 159

[Close]

BLAST of Lag0040584 vs. ExPASy Swiss-Prot
Match: O81906 (G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.0e-07
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 37  CSC----IKGGIGCMLWSRDLVDIQKFTNGGADLDYS------NESAKDKKGVIITIVLP 96
           CSC    + GGIGCM+W++DLVD+Q+F  GG+ L          E+ K K  VI+ +++ 
Sbjct: 389 CSCNAYSLVGGIGCMIWNQDLVDLQQFEAGGSSLHIRLADSEVGENRKTKIAVIVAVLVG 448

Query: 97  VTLITIFIIAISFWR 102
           V LI IF  A+  WR
Sbjct: 449 VILIGIF--ALLLWR 461

[Close]

BLAST of Lag0040584 vs. ExPASy Swiss-Prot
Match: P0C5E2 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3)

HSP 1 Score: 48.9 bits (115), Expect = 8.6e-05
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 142 LHASEIIDRDVKTSNILLDNNFNVKVTNLELLKQYP 178
           LHAS+II RDVK++NILLD NFNVKV +  L + +P
Sbjct: 456 LHASKIIHRDVKSNNILLDQNFNVKVADFGLSRLFP 491

[Close]

BLAST of Lag0040584 vs. ExPASy Swiss-Prot
Match: Q9C6K9 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.5e-04
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0


Query: 142 LHASEIIDRDVKTSNILLDNNFNVKVTNLELLKQYPA 179
           LHAS+II RDVKT+NILLD NF VKV +  L +  P+
Sbjct: 407 LHASDIIHRDVKTTNILLDRNFGVKVADFGLSRLLPS 443

[Close]

BLAST of Lag0040584 vs. ExPASy Swiss-Prot
Match: Q8VYG0 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.3 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.5e-04
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 0


Query: 140 SILHASEIIDRDVKTSNILLDNNFNVKVTNLELLKQYP 178
           S LHAS II RDVKT+NILLD+N+ VKV +  L + +P
Sbjct: 471 SYLHASGIIHRDVKTTNILLDSNYQVKVADFGLSRLFP 508

[Close]

BLAST of Lag0040584 vs. ExPASy Swiss-Prot
Match: Q9SY89 (Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana OX=3702 GN=At1g61610 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.3e-04
Identity = 25/77 (32.47%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 37  CSC----IKGGIGCMLWSRDLVDIQKFTNGGADLDYSNESAK---DKKGVIITIVLPVTL 96
           CSC    +  GIGCM+W+RDL+D++ F  GG  ++     +K    K+   + I++  ++
Sbjct: 393 CSCKAYALVVGIGCMIWTRDLIDMEHFERGGNSINIRLAGSKLGGGKENSTLWIIV-FSV 452

Query: 97  ITIFIIAISFWRKWKTK 107
           I  F++ +  W  WK K
Sbjct: 453 IGAFLLGLCIWILWKFK 468

[Close]

BLAST of Lag0040584 vs. ExPASy TrEMBL
Match: A0A6J1J6L0 (18S rRNA aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111483038 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-11
Identity = 59/142 (41.55%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 109 LFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEIIDRDV 168
           L VVD + A +     ++ R    ++L WL +                 L A+ II  + 
Sbjct: 108 LAVVDCSWARLGDVPFVKLRCGAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEG 167

Query: 169 KTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK---------PGV 223
           +T+++LL            N ELLKQY ACENSADII V NAWLSQQ+          G 
Sbjct: 168 ETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPRIVEGA 227

[Close]

BLAST of Lag0040584 vs. ExPASy TrEMBL
Match: A0A6J1ETU0 (18S rRNA aminocarboxypropyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111435889 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.9e-11
Identity = 58/142 (40.85%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 109 LFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEIIDRDV 168
           L VVD + A +     ++ R    ++L WL +                 L A+ II  + 
Sbjct: 108 LAVVDCSWARLGDVPFVKLRCGAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEG 167

Query: 169 KTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK---------PGV 223
           +T+++LL            N ELLKQY ACENSADII V N+WLSQQ+          G 
Sbjct: 168 ETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNSWLSQQRQVPKEPRVLEGA 227

[Close]

BLAST of Lag0040584 vs. ExPASy TrEMBL
Match: A0A0A0KXU5 (18S rRNA aminocarboxypropyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G031030 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.3e-11
Identity = 60/147 (40.82%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 104 KTKGFLFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEI 163
           K KG L VVD + A +     ++ R    ++L WL +                 L A+ I
Sbjct: 223 KQKG-LAVVDCSWARLGDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALI 282

Query: 164 IDRDVKTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK------- 223
           I  + +T+++LL            N ELLKQY ACENSADII V NAWLSQQ+       
Sbjct: 283 ICGEGETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPH 342

[Close]

BLAST of Lag0040584 vs. ExPASy TrEMBL
Match: A0A6J1CG12 (uncharacterized protein LOC111010889 OS=Momordica charantia OX=3673 GN=LOC111010889 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.3e-11
Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 29   CDAETSPICSC----IKGGIGCMLWSRDLVDIQKFTNGGADL-------DYSNESAKDKK 88
            C  E    CSC     +  IGCM+WSRDL+DIQKF +GGADL       D      KD K
Sbjct: 1235 CRRECLKNCSCNAYAFENSIGCMMWSRDLIDIQKFESGGADLYVRMAYADLDTYYVKDNK 1294

Query: 89   GVIITIVLPVTLITIFIIAISFWRKWKTKGFLFVVDHNCAHIQKYKVLRPR 129
            G++I IV+P  +I +  +    W +WKT+        +    +K K+L+ R
Sbjct: 1295 GIMIAIVVPALIIVLVTVTYLCWWRWKTRKQAAKEKRSIVTNKKEKILKLR 1345

[Close]

BLAST of Lag0040584 vs. ExPASy TrEMBL
Match: A0A6J1J3E9 (18S rRNA aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111483038 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10
Identity = 59/140 (42.14%), Postives = 75/140 (53.57%), Query Frame = 0


Query: 109 LFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEIIDRDV 168
           L VVD + A +     ++ R    ++L WL +                 L A+ II  + 
Sbjct: 108 LAVVDCSWARLGDVPFVKLRCGAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEG 167

Query: 169 KTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQK-----PGV--EK 223
           +T+++LL            N ELLKQY ACENSADII V NAWLSQQ+     P +  EK
Sbjct: 168 ETADLLLGKFKWGHAFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPRIVEEK 227

[Close]

BLAST of Lag0040584 vs. TAIR 10
Match: AT4G21390.1 (S-locus lectin protein kinase family protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-08
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 37  CSC----IKGGIGCMLWSRDLVDIQKFTNGGADLDYS------NESAKDKKGVIITIVLP 96
           CSC    + GGIGCM+W++DLVD+Q+F  GG+ L          E+ K K  VI+ +++ 
Sbjct: 389 CSCNAYSLVGGIGCMIWNQDLVDLQQFEAGGSSLHIRLADSEVGENRKTKIAVIVAVLVG 448

Query: 97  VTLITIFIIAISFWR 102
           V LI IF  A+  WR
Sbjct: 449 VILIGIF--ALLLWR 461

[Close]

BLAST of Lag0040584 vs. TAIR 10
Match: AT5G10070.1 (RNase L inhibitor protein-related )

HSP 1 Score: 49.7 bits (117), Expect = 3.6e-06
Identity = 45/147 (30.61%), Postives = 68/147 (46.26%), Query Frame = 0


Query: 104 KTKGFLFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEI 163
           K KG L VVD + A +      + R    ++L WL +                 L A+ I
Sbjct: 101 KRKG-LAVVDCSWARLTDVPFAKLRCTAPRLLPWLVAANPVNYGRPCELSCVEALSAALI 160

Query: 164 IDRDVKTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQQ-----KPG 223
           +  + +T+ +LL            N ++LK+Y  CENSA+II V N+WL+QQ     +P 
Sbjct: 161 LCGEKETAELLLGKFKWGHAFLSLNKDILKEYSKCENSAEIISVQNSWLTQQTQIPKQPP 220

[Close]

BLAST of Lag0040584 vs. TAIR 10
Match: AT1G18390.1 (Protein kinase superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 6.1e-06
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 142 LHASEIIDRDVKTSNILLDNNFNVKVTNLELLKQYP 178
           LHAS+II RDVK++NILLD NFNVKV +  L + +P
Sbjct: 453 LHASKIIHRDVKSNNILLDQNFNVKVADFGLSRLFP 488

[Close]

BLAST of Lag0040584 vs. TAIR 10
Match: AT1G18390.2 (Protein kinase superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 6.1e-06
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 142 LHASEIIDRDVKTSNILLDNNFNVKVTNLELLKQYP 178
           LHAS+II RDVK++NILLD NFNVKV +  L + +P
Sbjct: 459 LHASKIIHRDVKSNNILLDQNFNVKVADFGLSRLFP 494

[Close]

BLAST of Lag0040584 vs. TAIR 10
Match: AT5G10070.2 (RNase L inhibitor protein-related )

HSP 1 Score: 48.9 bits (115), Expect = 6.1e-06
Identity = 46/149 (30.87%), Postives = 69/149 (46.31%), Query Frame = 0


Query: 104 KTKGFLFVVDHNCAHIQKYKVLRPRVRGLQVLIWLFS----------------ILHASEI 163
           K KG L VVD + A +      + R    ++L WL +                 L A+ I
Sbjct: 101 KRKG-LAVVDCSWARLTDVPFAKLRCTAPRLLPWLVAANPVNYGRPCELSCVEALSAALI 160

Query: 164 IDRDVKTSNILLDN---NFNVKVTNLELLKQYPACENSADIILVLNAWLSQ------QKP 223
           +  + +T+ +LL            N ++LK+Y  CENSA+II V N+WL+Q      Q P
Sbjct: 161 LCGEKETAELLLGKFKWGHAFLSLNKDILKEYSKCENSAEIISVQNSWLTQQTQIPKQPP 220

The following BLAST results are available for this feature:

BLAST of Lag0040584 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896612.1	9.1e-12	42.18	18S rRNA aminocarboxypropyltransferase [Benincasa hispida]	[more]
XP_022984901.1	4.5e-11	41.55	ribosome biogenesis protein TSR3 homolog isoform X1 [Cucurbita maxima]	[more]
XP_023551798.1	4.5e-11	41.55	ribosome biogenesis protein TSR3 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022929250.1	1.0e-10	40.85	ribosome biogenesis protein TSR3 homolog isoform X1 [Cucurbita moschata]	[more]
KAE8637569.1	1.7e-10	40.82	hypothetical protein CSA_017846 [Cucumis sativus]	[more]

BLAST of Lag0040584 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81906	7.0e-07	42.67	G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsi...	[more]
P0C5E2	8.6e-05	63.89	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=A...	[more]
Q9C6K9	2.5e-04	62.16	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=A...	[more]
Q8VYG0	2.5e-04	60.53	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3 OS=A...	[more]
Q9SY89	4.3e-04	32.47	Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610...	[more]

BLAST of Lag0040584 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6L0	2.2e-11	41.55	18S rRNA aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC1114830...	[more]
A0A6J1ETU0	4.9e-11	40.85	18S rRNA aminocarboxypropyltransferase OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A0A0KXU5	8.3e-11	40.82	18S rRNA aminocarboxypropyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G03103...	[more]
A0A6J1CG12	8.3e-11	37.84	uncharacterized protein LOC111010889 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1J3E9	1.1e-10	42.14	18S rRNA aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC1114830...	[more]

BLAST of Lag0040584 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21390.1	5.0e-08	42.67	S-locus lectin protein kinase family protein	[more]
AT5G10070.1	3.6e-06	30.61	RNase L inhibitor protein-related	[more]
AT1G18390.1	6.1e-06	63.89	Protein kinase superfamily protein	[more]
AT1G18390.2	6.1e-06	63.89	Protein kinase superfamily protein	[more]
AT5G10070.2	6.1e-06	30.87	RNase L inhibitor protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 113..195 e-value: 1.2E-6 score: 29.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..222
None	No IPR available	PANTHER	PTHR32444	FAMILY NOT NAMED	coord: 42..100
None	No IPR available	PANTHER	PTHR32444:SF69	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13	coord: 42..100
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 136..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040584.1	Lag0040584.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0004672	protein kinase activity