Lag0040547 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040547
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	F-box protein CPR30-like
Location	chr13: 5877036 .. 5877629 (-)
RNA-Seq Expression	Lag0040547
Synteny	Lag0040547

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTCTTGAAAATCTTCCCGAAGAAGCGATAATCGAGATTTTATCAAGGCTTCCGCATGAGTCTCTACTCCGATTCAAGTGTGTTTCCAAATTCTGGTACGCAATAATCAATGATCCTGCAAATTCTTCTCTTCAACACAAATACATTCTTCTCAGGCGTCTTCTGACGAACAACAGATCAGGAAAATGTGAATCGATGCTTTCCATCTTCAAGTTTCCTCTCGACCTTGAACGATCTATGTCCATTCTCAATGTCGATTTGCCATGCGATGAGGATTTTCAATATTTTGAAATCAACGGTCATTCTCACGGCATAGTTTGTCTCAGCGATGGTGAAAGGGATATTGTCCTCTATAATCCGACGACTAAAGAGTTTCGTAAACTTCCGCCATCGATTATTCACTACTATGGACCTCGCACTCAGCCTGACGATTATGATTCGAACACGGACTCCATCGGATTCGGGTACGATTTGAAATCTAGAGATTTCAAAGTGGTTAGGGTTGTGGAGTTTTGGGAAGGAGTTCAAAATCTTCCCCCTTCCAGAGTGGAAATTTATGATTTGAGCAAAGATAGATGGAGAGATTGA

mRNA sequence

ATGGCGACTCTTGAAAATCTTCCCGAAGAAGCGATAATCGAGATTTTATCAAGGCTTCCGCATGAGTCTCTACTCCGATTCAAGTGTGTTTCCAAATTCTGGTACGCAATAATCAATGATCCTGCAAATTCTTCTCTTCAACACAAATACATTCTTCTCAGGCGTCTTCTGACGAACAACAGATCAGGAAAATGTGAATCGATGCTTTCCATCTTCAAGTTTCCTCTCGACCTTGAACGATCTATGTCCATTCTCAATGTCGATTTGCCATGCGATGAGGATTTTCAATATTTTGAAATCAACGGTCATTCTCACGGCATAGTTTGTCTCAGCGATGGTGAAAGGGATATTGTCCTCTATAATCCGACGACTAAAGAGTTTCGTAAACTTCCGCCATCGATTATTCACTACTATGGACCTCGCACTCAGCCTGACGATTATGATTCGAACACGGACTCCATCGGATTCGGGTACGATTTGAAATCTAGAGATTTCAAAGTGGTTAGGGTTGTGGAGTTTTGGGAAGGAGTTCAAAATCTTCCCCCTTCCAGAGTGGAAATTTATGATTTGAGCAAAGATAGATGGAGAGATTGA

Coding sequence (CDS)

ATGGCGACTCTTGAAAATCTTCCCGAAGAAGCGATAATCGAGATTTTATCAAGGCTTCCGCATGAGTCTCTACTCCGATTCAAGTGTGTTTCCAAATTCTGGTACGCAATAATCAATGATCCTGCAAATTCTTCTCTTCAACACAAATACATTCTTCTCAGGCGTCTTCTGACGAACAACAGATCAGGAAAATGTGAATCGATGCTTTCCATCTTCAAGTTTCCTCTCGACCTTGAACGATCTATGTCCATTCTCAATGTCGATTTGCCATGCGATGAGGATTTTCAATATTTTGAAATCAACGGTCATTCTCACGGCATAGTTTGTCTCAGCGATGGTGAAAGGGATATTGTCCTCTATAATCCGACGACTAAAGAGTTTCGTAAACTTCCGCCATCGATTATTCACTACTATGGACCTCGCACTCAGCCTGACGATTATGATTCGAACACGGACTCCATCGGATTCGGGTACGATTTGAAATCTAGAGATTTCAAAGTGGTTAGGGTTGTGGAGTTTTGGGAAGGAGTTCAAAATCTTCCCCCTTCCAGAGTGGAAATTTATGATTTGAGCAAAGATAGATGGAGAGATTGA

Protein sequence

MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPANSSLQHKYILLRRLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGERDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFWEGVQNLPPSRVEIYDLSKDRWRD

Homology

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BLAST of Lag0040547 vs. NCBI nr
Match: XP_038906036.1 (F-box protein CPR1-like [Benincasa hispida])

HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65
Identity = 126/203 (62.07%), Postives = 159/203 (78.33%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA+L NLPEE +IEILSRLP ESLLRFKCV K WYA+INDP       ++SLQHK +LL+
Sbjct: 1   MASLGNLPEEVMIEILSRLPPESLLRFKCVRKSWYALINDPKFKAKHFSNSLQHKQVLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T N SG  E++ S  K PL ++RS+S+ ++DLP DEDF++FEI+GHSHG++CL+D  
Sbjct: 61  RLVTKN-SGNKENIFSFLKLPLSIDRSVSVSDLDLPFDEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           +DI L NP+T+EF KLPPSI+    P  +PD YDS+T+++GFGYD KSRDFKVVRVV+F 
Sbjct: 121 KDIFLCNPSTREFHKLPPSILLLTEPPAEPDGYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P RVEIYDLSKDRWR+
Sbjct: 181 EGPGYFHPPRVEIYDLSKDRWRE 202

[Close]

BLAST of Lag0040547 vs. NCBI nr
Match: XP_022935692.1 (F-box protein CPR30-like [Cucurbita moschata])

HSP 1 Score: 254.6 bits (649), Expect = 7.0e-64
Identity = 127/203 (62.56%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA L +LPEE +IEILSRLP ESLLRFK V K WYA+IN+P       ++SL+ K++LL+
Sbjct: 1   MAALGHLPEEVMIEILSRLPPESLLRFKTVRKSWYALINNPKFATKHFSNSLKQKHVLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T N SGK E++ S  KFPL L+ S+ + +VDLP DEDF+YFEI GHSHG++CL+D  
Sbjct: 61  RLVTKN-SGKKENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           RDI L NP T+EFRKLPPSI+    P T+PD YDS+T+++GFGYD KSRDFKVVRVV F 
Sbjct: 121 RDIFLCNPATREFRKLPPSILLLTEPPTEPDGYDSSTNAVGFGYDSKSRDFKVVRVVNFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P RVEIYDLSKDRWR+
Sbjct: 181 EGPGYFHPPRVEIYDLSKDRWRE 202

[Close]

BLAST of Lag0040547 vs. NCBI nr
Match: XP_004147498.2 (F-box protein CPR1-like [Cucumis sativus] >KGN59711.2 hypothetical protein Csa_001630 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 1.6e-63
Identity = 122/203 (60.10%), Postives = 157/203 (77.34%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA+L NLP+  II+ILSRLP ESLLRFKCV K WYA+ NDP       ++SLQHK+ILL+
Sbjct: 1   MASLPNLPDGVIIDILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHILLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T + SG  E++ S+FK PL +  S+S+ ++DLP  EDF++FEI GHSHG++CL+D  
Sbjct: 61  RLVTKH-SGNKENIFSLFKLPLSIHPSLSLSDIDLPFHEDFRFFEIRGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           +DI L NP+T+EF KLPPSI+    P  +PDDYDS+T+++GFGYD KSRDFKVVRVV+F 
Sbjct: 121 KDIFLCNPSTREFHKLPPSILLLTEPPVEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P RVE+YDLSKDRWR+
Sbjct: 181 EGPGYFYPPRVEVYDLSKDRWRE 202

[Close]

BLAST of Lag0040547 vs. NCBI nr
Match: XP_008443403.1 (PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053766.1 F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 251.1 bits (640), Expect = 7.7e-63
Identity = 121/203 (59.61%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA+L NLP+  IIEILSRLP ESLLRFKCV K WYA+ NDP       ++SLQHK++LL+
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T + SGK E++ SI K PL +  S+SI ++DLP  EDF++FEI+GHSHG++CL+D  
Sbjct: 61  RLVTKD-SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           +DI L NP+T+EF +LPPSI+    P  +PDDYDS+T+++GFGYD KSRDFKVVRVV+F 
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P +VE+YDLSK+RWR+
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWRE 202

[Close]

BLAST of Lag0040547 vs. NCBI nr
Match: TYK25636.1 (F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 251.1 bits (640), Expect = 7.7e-63
Identity = 121/203 (59.61%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA+L NLP+  IIEILSRLP ESLLRFKCV K WYA+ NDP       ++SLQHK++LL+
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T + SGK E++ SI K PL +  S+SI ++DLP  EDF++FEI+GHSHG++CL+D  
Sbjct: 61  RLVTKD-SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           +DI L NP+T+EF +LPPSI+    P  +PDDYDS+T+++GFGYD KSRDFKVVRVV+F 
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P +VE+YDLSK+RWR+
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWRE 202

[Close]

BLAST of Lag0040547 vs. ExPASy Swiss-Prot
Match: Q8GXC7 (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-15
Identity = 66/227 (29.07%), Postives = 106/227 (46.70%), Query Frame = 0


Query: 7   LPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPANSSLQHKYILLR----RLLTNNRS 66
           LP E I EIL RLP +S+ RF+CVSK +  + +DP  + + H  ++LR    R L     
Sbjct: 36  LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKI-HLDLILRNESVRSLHRKLI 95

Query: 67  GKCESMLSI-FKFPLDLERSMSILNVDLPCDEDFQYF----------------------- 126
               ++ S+ F    D  R ++ +  + P  +D   F                       
Sbjct: 96  VSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLN 155

Query: 127 ---------EINGHSHGIVCLSDGERDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDS 186
                    EI G S+G+VC+S GE  + LYNPTT + ++LP +    + P++   + D 
Sbjct: 156 AKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPEN----FRPKSVEYERD- 215

Query: 187 NTDSIGFGYDLKSRDFKVVRVVEFWEGVQNLPPSRVEIYDLSKDRWR 197
           N  + GFG+D  + D+K+V++V   E + +       +Y L  D WR
Sbjct: 216 NFQTYGFGFDGLTDDYKLVKLVATSEDILD-----ASVYSLKADSWR 251

[Close]

BLAST of Lag0040547 vs. ExPASy Swiss-Prot
Match: Q9SU30 (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14
Identity = 63/209 (30.14%), Postives = 103/209 (49.28%), Query Frame = 0


Query: 4   LENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDP--ANSSL-------QHKYILLR 63
           +  +P + + +I  RLP ++L+R + +SK  Y +INDP    S L        H  ILLR
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 64  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 123
             L                + +DL+   S+ +V+ P        E+ G S+G++ LS+  
Sbjct: 61  GALR--------------LYSVDLDSLDSVSDVEHPMKRGGP-TEVFGSSNGLIGLSNSP 120

Query: 124 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDS---IGFGYDLKSRDFKVVRVV 183
            D+ ++NP+T++  +LPPS I        PD   S+T      G GYD  S D+KVVR+V
Sbjct: 121 TDLAVFNPSTRQIHRLPPSSIDL------PD--GSSTRGYVFYGLGYDSVSDDYKVVRMV 180

Query: 184 EFWEGVQN----LPPSRVEIYDLSKDRWR 197
           +F    ++      P  V+++ L K+ W+
Sbjct: 181 QFKIDSEDELGCSFPYEVKVFSLKKNSWK 186

[Close]

BLAST of Lag0040547 vs. ExPASy Swiss-Prot
Match: Q9LIR8 (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 58/203 (28.57%), Postives = 94/203 (46.31%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPANSSLQHKYIL-LRRLLTN 60
           M +  NLP E + EIL RLP +SL RFKCV   W ++I++    +L+H  IL   +  T+
Sbjct: 8   MFSPHNLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETL-FALKHALILETSKATTS 67

Query: 61  NRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQ-----YFEINGHSHGIVCLS-DG 120
            +S       S +        S+   +     + D +     Y+++ G  HG+VC   D 
Sbjct: 68  TKSPYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDY 127

Query: 121 ERDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEF 180
           ++ + L+NPT K  ++L  S +            D    + GFGYD    D+KVV +++ 
Sbjct: 128 DKSLYLWNPTIKLQQRLSSSDLE--------TSDDECVVTYGFGYDESEDDYKVVALLQQ 187

Query: 181 WEGVQNLPPSRVEIYDLSKDRWR 197
              V+       +IY   +  WR
Sbjct: 188 RHQVK----IETKIYSTRQKLWR 197

[Close]

BLAST of Lag0040547 vs. ExPASy Swiss-Prot
Match: Q9FGY4 (F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 54/167 (32.34%), Postives = 81/167 (48.50%), Query Frame = 0


Query: 8   PEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPANSSLQHKYILLRRLLTNNRSGKCES 67
           P+E I++IL+RLP +SL RFK V K WY + +D   +SL ++  +  +LL    S    S
Sbjct: 10  PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAEVSDS-SS 69

Query: 68  MLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGERDIVLY--NPTTK 127
           ++ +     D  R +S L++D   D       I   S+G++C S      V Y  NP+T+
Sbjct: 70  LICV-----DNLRGVSELSLDFVRDR----VRIRVSSNGLLCCSSIPEKGVYYVCNPSTR 129

Query: 128 EFRKLPPS----IIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVV 169
           E+RKLP S    +  +Y         D     +G   DL    F VV
Sbjct: 130 EYRKLPKSRERPVTRFYP--------DGEATLVGLACDLSKNKFNVV 158

[Close]

BLAST of Lag0040547 vs. ExPASy Swiss-Prot
Match: Q9LU24 (Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.4e-11
Identity = 53/192 (27.60%), Postives = 82/192 (42.71%), Query Frame = 0


Query: 7   LPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPANSSLQHKYILLRRLLTNNRSGKCE 66
           LPEE  IEIL RL  + L RF+CV K W  +INDP                 +    K  
Sbjct: 5   LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPG----------FTETYRDMSPAKFV 64

Query: 67  SMLSIFKFPLDLERSMSIL--NVDLPCDED-FQYFEINGHSHGIVCLSDGERDIVLYNPT 126
           S      + LD+E    ++   +D P D+          H  G +C++     ++++NP 
Sbjct: 65  SFYDKNFYMLDVEGKHPVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLKNHTLMVWNPF 124

Query: 127 TKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFWEGVQNLPPS 186
           +K+F+ +P   I+           DSN   +GFGYD    D+KVV  ++       L  S
Sbjct: 125 SKQFKIVPNPGIY----------QDSNI--LGFGYDPVHDDYKVVTFID------RLDVS 168

Query: 187 RVEIYDLSKDRW 196
              +++     W
Sbjct: 185 TAHVFEFRTGSW 168

[Close]

BLAST of Lag0040547 vs. ExPASy TrEMBL
Match: A0A6J1F6B1 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.4e-64
Identity = 127/203 (62.56%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA L +LPEE +IEILSRLP ESLLRFK V K WYA+IN+P       ++SL+ K++LL+
Sbjct: 1   MAALGHLPEEVMIEILSRLPPESLLRFKTVRKSWYALINNPKFATKHFSNSLKQKHVLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T N SGK E++ S  KFPL L+ S+ + +VDLP DEDF+YFEI GHSHG++CL+D  
Sbjct: 61  RLVTKN-SGKKENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           RDI L NP T+EFRKLPPSI+    P T+PD YDS+T+++GFGYD KSRDFKVVRVV F 
Sbjct: 121 RDIFLCNPATREFRKLPPSILLLTEPPTEPDGYDSSTNAVGFGYDSKSRDFKVVRVVNFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P RVEIYDLSKDRWR+
Sbjct: 181 EGPGYFHPPRVEIYDLSKDRWRE 202

[Close]

BLAST of Lag0040547 vs. ExPASy TrEMBL
Match: A0A5A7UHP3 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001510 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.7e-63
Identity = 121/203 (59.61%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA+L NLP+  IIEILSRLP ESLLRFKCV K WYA+ NDP       ++SLQHK++LL+
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T + SGK E++ SI K PL +  S+SI ++DLP  EDF++FEI+GHSHG++CL+D  
Sbjct: 61  RLVTKD-SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           +DI L NP+T+EF +LPPSI+    P  +PDDYDS+T+++GFGYD KSRDFKVVRVV+F 
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P +VE+YDLSK+RWR+
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWRE 202

[Close]

BLAST of Lag0040547 vs. ExPASy TrEMBL
Match: A0A5D3DPN6 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007960 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.7e-63
Identity = 121/203 (59.61%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA+L NLP+  IIEILSRLP ESLLRFKCV K WYA+ NDP       ++SLQHK++LL+
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T + SGK E++ SI K PL +  S+SI ++DLP  EDF++FEI+GHSHG++CL+D  
Sbjct: 61  RLVTKD-SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           +DI L NP+T+EF +LPPSI+    P  +PDDYDS+T+++GFGYD KSRDFKVVRVV+F 
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P +VE+YDLSK+RWR+
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWRE 202

[Close]

BLAST of Lag0040547 vs. ExPASy TrEMBL
Match: A0A1S3B7G6 (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.7e-63
Identity = 121/203 (59.61%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA+L NLP+  IIEILSRLP ESLLRFKCV K WYA+ NDP       ++SLQHK++LL+
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T + SGK E++ SI K PL +  S+SI ++DLP  EDF++FEI+GHSHG++CL+D  
Sbjct: 61  RLVTKD-SGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           +DI L NP+T+EF +LPPSI+    P  +PDDYDS+T+++GFGYD KSRDFKVVRVV+F 
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P +VE+YDLSK+RWR+
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWRE 202

[Close]

BLAST of Lag0040547 vs. ExPASy TrEMBL
Match: A0A6J1J6Y5 (F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 123/203 (60.59%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 1   MATLENLPEEAIIEILSRLPHESLLRFKCVSKFWYAIINDPA------NSSLQHKYILLR 60
           MA L +LPEE +IEILSRLP ESLLRFK V K WYA+I++P       ++SL+HK++LL+
Sbjct: 1   MAALGHLPEEVMIEILSRLPPESLLRFKTVRKSWYALIDNPKFATKHFSNSLKHKHVLLK 60

Query: 61  RLLTNNRSGKCESMLSIFKFPLDLERSMSILNVDLPCDEDFQYFEINGHSHGIVCLSDGE 120
           RL+T N SGK E++ S  KFPL L+ S+ + +VD P DEDF+YFEI GHSHG++CL+D  
Sbjct: 61  RLVTKN-SGKKENIFSFLKFPLPLDGSVPVFDVDWPFDEDFRYFEIRGHSHGLLCLTDLR 120

Query: 121 RDIVLYNPTTKEFRKLPPSIIHYYGPRTQPDDYDSNTDSIGFGYDLKSRDFKVVRVVEFW 180
           RDI L NP T+EFRKLP SI+    P T+PD YDS+T+++GFGYD KS+DFKVVRVV F 
Sbjct: 121 RDIFLCNPATREFRKLPQSILLLTEPPTEPDGYDSSTNAVGFGYDSKSKDFKVVRVVNFV 180

Query: 181 EGVQNLPPSRVEIYDLSKDRWRD 198
           EG     P R EIYDLSKDRWR+
Sbjct: 181 EGPGYFHPPRAEIYDLSKDRWRE 202

The following BLAST results are available for this feature:

BLAST of Lag0040547 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906036.1	2.2e-65	62.07	F-box protein CPR1-like [Benincasa hispida]	[more]
XP_022935692.1	7.0e-64	62.56	F-box protein CPR30-like [Cucurbita moschata]	[more]
XP_004147498.2	1.6e-63	60.10	F-box protein CPR1-like [Cucumis sativus] >KGN59711.2 hypothetical protein Csa_0...	[more]
XP_008443403.1	7.7e-63	59.61	PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053766.1 F-box protein C...	[more]
TYK25636.1	7.7e-63	59.61	F-box protein CPR30-like [Cucumis melo var. makuwa]	[more]

BLAST of Lag0040547 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXC7	2.1e-15	29.07	F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g0624...	[more]
Q9SU30	1.8e-14	30.14	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	[more]
Q9LIR8	1.4e-11	28.57	F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g2388...	[more]
Q9FGY4	2.4e-11	32.34	F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1	[more]
Q9LU24	5.4e-11	27.60	Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE...	[more]

BLAST of Lag0040547 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6B1	3.4e-64	62.56	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1	[more]
A0A5A7UHP3	3.7e-63	59.61	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3DPN6	3.7e-63	59.61	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B7G6	3.7e-63	59.61	F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1	[more]
A0A6J1J6Y5	3.2e-62	60.59	F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 7..49 e-value: 4.0E-5 score: 33.0
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 3..41 e-value: 3.1E-10 score: 39.7
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..49 score: 11.934954
None	No IPR available	GENE3D	1.20.1280.50		coord: 5..43 e-value: 1.3E-9 score: 39.9
None	No IPR available	PANTHER	PTHR47993:SF44	F-BOX PROTEIN CPR30-LIKE ISOFORM X1	coord: 4..197
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 4..197
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040547.1	Lag0040547.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding