Lag0040486 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040486
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	thioredoxin-like 3-2, chloroplastic
Location	chr13: 5261798 .. 5266169 (+)
RNA-Seq Expression	Lag0040486
Synteny	Lag0040486

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCGCCGACAGTTAGAGGGATGGTGTGTTGTGGGTGGGTGGTAGGTGGATGGTGGAGAAAAAGAATGAGGAAAAGAGAAAGAAATAAAATATTAAAAATTAATAATTTTTTATTGATTTAATATTACTTTTGTTTTAAAAATTAAAAAAATTATTTTTTAAATAAAAAATGTGTCACGTCAGCAATCTGTTAGTTATTATCGAAAAAAGGGATGAATAGACCAAAATGAAACTAAATCCAAACCTCTGGGACTAAATTGTCGAGTTTGAAAACTCATGGACCAAAATGAAGCCTAATCCAAACTTTAGAAATTAAAAGTGTATTTTTTCCTTTTTTTTTTTAAGAAAAAAATGCTAGACAATGGTTTCCTATCTATTGTTATTTCCTTTTAAATTAGAAGACTGACAAAATTATTTTGTTCTCCGTAACCATTTATAGCTTTTTGTTTCTAAAAATTTAAATTATACCCAAAGGGATAAAATACTTCTCTAAGAAAATAACCAGAAGAAGTAAGTCAGAGCGAGCATGGTTCAACGGTATTTGACATGTACTTTTGACCAAAAGGTTAGAGGTTTGAATCTCCTTTTACTCTGTTGAATAAATAAATAAATAAATAAATAACTAGAAGAAGGGAGAGCAATATTTCAGATTAAATTTTCAAAAAAACTTATATAATATTAGAACCATTTATTTATTTATTTGAAACAACAAACTTATTAAAAATGAGAATGGGAACGTTGGATCTTTTAGCATAGATACGTGTTTTTCAAGAACTAGAATAGCAATAAAAATGTTACACACAATTCTTACTGATAAGTTTGAATAGTATATATTTTTTCAAAAAAAAAGTTTGAATAGTATATATATTTACTTTTCAAACAAATACTAATGTACATGTTTGAAAATGAGAAGGGAGTGATTTTTAAAAATATATTTAATTTATGACTTTATAACCCACATAACTTTTTTTTTTTTTTTTTTGAGAAAAAACATAAACATAATTTAGCAGTTAAATAGCAAAAACAATTATTATTTTTCTTAAAGTCGGATATTAAAATTTTCACCTCACATCTAATGTACATCTATTGTACTTATATTTAATATTAACTTCTCCATTAATTTTTTTTTTCAAAAAAAAAAACTTATCCATTAAAAATTTGATTCCGCAAATTATGCGCCACCCAATAAAAAATATTCGCCACTCCTTTTATAAAATTAATTAATCTATATTAAAAGGCGGAACAAACAATTGCATAGTTCAACTAGTCGAACCAACGATTGTATAACTCAACTAGCATTTATGTGTGTTTATGATTTATGATGAAGAGGTCATGAGTTTGAATTCTCTTACCAGCATTTTGATATACTTTTTTTTCATTTTAGATCATTTTTTTTTCTATTGTTGAGAACTTTTTATTTTTGTTTTCTAATGTCTAGGATGACAAAAATAAAGCAATTATGGAAGTTTTTTTTTTCTTCAAATACCGTTTTCTGGTTTAATTCTTGCTAAGAATTTTGTGAGTTTTTTTTTTTTTTTTTTATTTTATTTTCTGTTAATTAGAAAAACATGTAAGTGTAGGAAATGAAAACAATTTTTTTTTTTCTTTTTCCTATTTTTGCTAAACTTTTTTAGTTGTTAATAGCTTTGTGATCCTTTTTTTTTTCTTTTTTTTTCTTTTCTTTTCTAGGAGGAGTGGACCAATAACAATGAGAAGAATAAACTTGGAGTGTTTGATTTTTTTTTCAAATAAAGAGTTTCTCGTCTTATAAGAAATCAACTCGGTCAAAGCAAGCATAGGTAGCGGTAGTTGATATGTACTTTTGACTAAAAGTTCAGAGGTTCGAACCCCTCCAATGTTGCTGAACTAAAAAAATATGCAATGTGAATTGTTTTTTTTTTTTAAAACACACACACACAAAAGAGAACTGCCAATCACATGTATTAGATTACATGGGCTTCCATCTCAAAACCAATTGACAATGAGTGGAGTGACCCTTGAAGCTTATATAGTGTGAGGTATCCACTAATCTTTTCAATGTGGGATCCTCAACAATATGTACTAATGGCGAATAAAATGAAAAGTTAACCACAAGTCTACATTACAATACTTATATAAGTTTAGGATTCGATTTAATGAAATAAAAAATTTAGGGTTGAAATTGATACAACATGTTAAATTTGATAAAATTGAAAGTTTAAGGTTAACATTGATATAATAGGCTAAGTTAATAGTCAAAATTGATTTTTTTTGTTTTTTTTGTTTTTAATCCTATTTGACTTGATTAAATTTTAATATATTATTATTTTCCCAACGCGGTTTCTTTGGATCCGTCACCCGCACGAAATATAATATATTATATTCAATTTCTAATTTCCTACGACTGTTTTCCTTTTCCCAATAATTTAGAAAATTTGAAGAAAAAAAAAAGTCCAAGGAATGCATGCGGCAGCCAGCCACGACTTCCACTTCAATTTAATTTACTTTTTTTCTAATTTTTAAATTTCTATTATTTTATTTGTTTTTTTTTAAATATTTTATTTTGTTTCTAAATTCTGTTTGTTTTTGTTTCTTCCTCAAATGCCGTTTCGTTAAGGTTTTACAGTTTTGGAGATCGATTGGAACAATCCCTCAACTGACTCTGAATCTCCCGGTGGGACCCCACCGGAACCCTCTTCAAGCCGCCGCCTCCGCCTCCGCCGCCGCCGCCAGTGCTCCGATCAAGCCCACCAACCGCCGCCCTCTGACCTCTTCTTCTTCTTCTTCTCTCTCTTTTTCTTTCTTTTGCCGTTTCTCAATTCTTCTCACTTCCGAAATGGTGAAAGCTTTGCCCCTTCACCTCGGAACCGTGAATTCTTTCCCCAAATTCGACGCCCCTTTTGATCTTCCGGCGCCGAGGCTCGCCGTCTCTGGTCACAACGGGCTTCCTTTGTCCCGAAAAATTCCGCCGCTTTCCCAGAAAGTTTCTGCGACTGGTGAGAAGATTTCGGTGCTCGGAGCTTGGACCCAAGAGAGTCCCCTGCAGTTTCGTGATGAATCGCCTGTGTCGATCGAGCTCAAGTCCATTTGCAGCGAACTTGAGTTCGATAAGGCTATTGTGGATGCAGAGGAACGCAAAGAGCTCGTAATTCTCGTATGGTATGTATGCGTGTCTTGTGGGCTTTTCTGGGAAATGTTGAGTTAATTATGAAGTTTCTTCCCGATTGTTTCTAGTATAAGATACAGAGAACGAAATCTGACGATGCGAATGTATTTGAGTTTGACTGGATCTTCTTTTATCAGAAATTTATTCGTTTATCAGGAAGAATTGTCCTCAACTGCTGGATTTTGCCTTGGATTTCGCTGAAACAGAATAATTTAGTGATCATTTTGAAGTGAATGATGTGATAGTTTTTCTCCAGTTTTCATTACCAGCCATTCAAGTGCATTTCTCTTTATTTTATCTTCTTTCGTTGAAAATTGAGTTTATTTGGATCTGTAGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAACCCCAATTGGAAAGATTGGCTGCTGATTATTACCCCAGGTTAGCTCTTAGCCCATTTCTAACCAACTTAATGGTTAAAATATGAACTGTGTTATCATTCTATAAGTGCTGGATAATTTTTAAAAGACCAGTGTGCCAGTCCTTATTGAAGTTGTGTATGTGCTTGATCAATTGTAGATTGCAATTCTATTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGTGCCGGATTAGCTGTAAGTTCCTTTCAAAGCTTTTTGATGTTTCTTCCATTTTGTTTGTGTTGCCATAAACCTTTATAATGGTCTTCATCTTCTTTAGGAAGGACTTGAGATTCTGAAAAGTTATTCTTCTGTAAGGGAGCGATTGTCTTTAGATAGTGTACTTGAGGTTCTGTTTACAATGGAATTCATACTTGTGTTTCGTTACCTTTAGGAACATTTCCAATTTGCAGTTTGAACATAGGAGACAGAGGACATGTTGAGCTTGTTTTACTTTGATGGATGAGTTGATTGAATAAACTGCATGATCTGTTTTATCTCTCATTTTAATTTGTGCCTTTGATTCAAGTCCTGATAGTTTCAATTTTTATATTTTCTCATGTATCTCAACCGTTCGTCTTTGAATCTACCAGAAGATGCCAGCTATACAGGTGAGTTTCTTCACAATCAGATGTCTTAAAACTGGAAACCTTCCTCTCTACTAATGTCAAGATCTTGATTATGTTTGTTGCAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTTGTCAACGACGTTCAGAAAATGATTGAACGTGAGCTAACAGGCGAGTGA

mRNA sequence

ATGCCGCCGCCGACAGTTAGAGGGATGGTTTTACAGTTTTGGAGATCGATTGGAACAATCCCTCAACTGACTCTGAATCTCCCGGTGGGACCCCACCGGAACCCTCTTCAAGCCGCCGCCTCCGCCTCCGCCGCCGCCGCCAGTGCTCCGATCAAGCCCACCAACCGCCGCCCTCTGACCTCTTCTTCTTCTTCTTCTCTCTCTTTTTCTTTCTTTTGCCGTTTCTCAATTCTTCTCACTTCCGAAATGGTGAAAGCTTTGCCCCTTCACCTCGGAACCGTGAATTCTTTCCCCAAATTCGACGCCCCTTTTGATCTTCCGGCGCCGAGGCTCGCCGTCTCTGGTCACAACGGGCTTCCTTTGTCCCGAAAAATTCCGCCGCTTTCCCAGAAAGTTTCTGCGACTGGTGAGAAGATTTCGGTGCTCGGAGCTTGGACCCAAGAGAGTCCCCTGCAGTTTCGTGATGAATCGCCTGTGTCGATCGAGCTCAAGTCCATTTGCAGCGAACTTGAGTTCGATAAGGCTATTGTGGATGCAGAGGAACGCAAAGAGCTCGTAATTCTCGTATGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAACCCCAATTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTATTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGTGCCGGATTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTTGTCAACGACGTTCAGAAAATGATTGAACGTGAGCTAACAGGCGAGTGA

Coding sequence (CDS)

ATGCCGCCGCCGACAGTTAGAGGGATGGTTTTACAGTTTTGGAGATCGATTGGAACAATCCCTCAACTGACTCTGAATCTCCCGGTGGGACCCCACCGGAACCCTCTTCAAGCCGCCGCCTCCGCCTCCGCCGCCGCCGCCAGTGCTCCGATCAAGCCCACCAACCGCCGCCCTCTGACCTCTTCTTCTTCTTCTTCTCTCTCTTTTTCTTTCTTTTGCCGTTTCTCAATTCTTCTCACTTCCGAAATGGTGAAAGCTTTGCCCCTTCACCTCGGAACCGTGAATTCTTTCCCCAAATTCGACGCCCCTTTTGATCTTCCGGCGCCGAGGCTCGCCGTCTCTGGTCACAACGGGCTTCCTTTGTCCCGAAAAATTCCGCCGCTTTCCCAGAAAGTTTCTGCGACTGGTGAGAAGATTTCGGTGCTCGGAGCTTGGACCCAAGAGAGTCCCCTGCAGTTTCGTGATGAATCGCCTGTGTCGATCGAGCTCAAGTCCATTTGCAGCGAACTTGAGTTCGATAAGGCTATTGTGGATGCAGAGGAACGCAAAGAGCTCGTAATTCTCGTATGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAACCCCAATTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTATTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGTGCCGGATTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTTGTCAACGACGTTCAGAAAATGATTGAACGTGAGCTAACAGGCGAGTGA

Protein sequence

MPPPTVRGMVLQFWRSIGTIPQLTLNLPVGPHRNPLQAAASASAAAASAPIKPTNRRPLTSSSSSSLSFSFFCRFSILLTSEMVKALPLHLGTVNSFPKFDAPFDLPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVLGAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIERELTGE

Homology

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BLAST of Lag0040486 vs. NCBI nr
Match: KAG7012912.1 (Thioredoxin-like 3-2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.6 bits (906), Expect = 1.6e-93
Identity = 174/196 (88.78%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVL 142
           MVK LP+H GTV SFPK DA FDLPA +L VSG N LPLS+K PPLS KVSATGEKISVL
Sbjct: 1   MVKVLPVHFGTVKSFPKLDARFDLPAAKLTVSGFNRLPLSQKFPPLSLKVSATGEKISVL 60

Query: 143 GAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLK 202
           G WTQES LQFRDESPVSIELKSICSELEFDKAI+DAE+R E VI+VWMANWCRNYIYLK
Sbjct: 61  GDWTQESSLQFRDESPVSIELKSICSELEFDKAIMDAEKRNEPVIIVWMANWCRNYIYLK 120

Query: 203 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYL 262
           PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKD KKQDEVIGLYKAYL
Sbjct: 121 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDSKKQDEVIGLYKAYL 180

Query: 263 VVNDVQKMIERELTGE 279
           VVNDVQKMIERELTGE
Sbjct: 181 VVNDVQKMIERELTGE 196

[Close]

BLAST of Lag0040486 vs. NCBI nr
Match: XP_022944830.1 (thioredoxin-like 3-2, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 2.0e-93
Identity = 174/196 (88.78%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVL 142
           MVK LP+H GTV SFPK DA FDLPA +L VSG N LPLS+K PPLS KVSATGEKISVL
Sbjct: 1   MVKVLPVHFGTVKSFPKLDARFDLPAAKLTVSGFNRLPLSQKFPPLSLKVSATGEKISVL 60

Query: 143 GAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLK 202
           G WTQES LQFRDESPVSIELKSICSELEFDKAI DAE+R E VI+VWMANWCRNYIYLK
Sbjct: 61  GDWTQESSLQFRDESPVSIELKSICSELEFDKAITDAEKRNEPVIIVWMANWCRNYIYLK 120

Query: 203 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYL 262
           PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKD KKQDEVIGLYKAYL
Sbjct: 121 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDSKKQDEVIGLYKAYL 180

Query: 263 VVNDVQKMIERELTGE 279
           VVNDVQKMIERELTGE
Sbjct: 181 VVNDVQKMIERELTGE 196

[Close]

BLAST of Lag0040486 vs. NCBI nr
Match: XP_038891538.1 (thioredoxin-like 3-2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 352.1 bits (902), Expect = 4.5e-93
Identity = 178/203 (87.68%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLPAP------RLAVSGHNGLPLSRKIPPLSQKVSATG 142
           MVKALPLHLG V SFPKFD  FDLP P      RLA SG N LPL RK PPLSQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAGSGFNRLPLCRKFPPLSQKVSATG 60

Query: 143 EK-ISVLGAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWC 202
           EK  S+LGAWTQ+S LQFRDESPVSIELKSICSELEFDKAI DAE+R ELVILVWMANWC
Sbjct: 61  EKTTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC 120

Query: 203 RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI 262
           RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI
Sbjct: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI 180

Query: 263 GLYKAYLVVNDVQKMIERELTGE 279
           GLYKAYLV+NDVQKMIERELTGE
Sbjct: 181 GLYKAYLVINDVQKMIERELTGE 203

[Close]

BLAST of Lag0040486 vs. NCBI nr
Match: XP_023541920.1 (thioredoxin-like 3-2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-92
Identity = 173/196 (88.27%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVL 142
           MVK LP+H GTV S PK DA FDLPA +L VSG N LPLS+K PPLS KVSATGEKISVL
Sbjct: 1   MVKVLPVHFGTVKSIPKLDARFDLPAAKLTVSGFNRLPLSQKFPPLSLKVSATGEKISVL 60

Query: 143 GAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLK 202
           G WTQES LQFRDESPVSIELKSICSELEFDKAI DAE+R E VI+VWMANWCRNYIYLK
Sbjct: 61  GDWTQESSLQFRDESPVSIELKSICSELEFDKAITDAEKRNEPVIIVWMANWCRNYIYLK 120

Query: 203 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYL 262
           PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKD KKQDEVIGLYKAYL
Sbjct: 121 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDSKKQDEVIGLYKAYL 180

Query: 263 VVNDVQKMIERELTGE 279
           VVNDVQKMIERELTGE
Sbjct: 181 VVNDVQKMIERELTGE 196

[Close]

BLAST of Lag0040486 vs. NCBI nr
Match: XP_022967023.1 (thioredoxin-like 3-2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 349.0 bits (894), Expect = 3.8e-92
Identity = 172/196 (87.76%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVL 142
           MVK LP+H GT+ SFPK DA FDLPA +L VSG N LPLS+K PPLS KVSATGEKISVL
Sbjct: 1   MVKVLPVHFGTLKSFPKLDARFDLPAAKLTVSGFNRLPLSQKFPPLSLKVSATGEKISVL 60

Query: 143 GAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLK 202
           G WTQES LQF DESPVSIELKSICSELEFDKAI DAE+R E VI+VWMANWCRNYIYLK
Sbjct: 61  GDWTQESSLQFCDESPVSIELKSICSELEFDKAITDAEKRNEPVIIVWMANWCRNYIYLK 120

Query: 203 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYL 262
           PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKD KKQDEVIGLYKAYL
Sbjct: 121 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDSKKQDEVIGLYKAYL 180

Query: 263 VVNDVQKMIERELTGE 279
           VVNDVQKMIERELTGE
Sbjct: 181 VVNDVQKMIERELTGE 196

[Close]

BLAST of Lag0040486 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.4e-42
Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 106 LPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVLGAWTQESPLQFRDESPVSIELKS 165
           L  P    S     P + K    + K+    E+I  +    Q+  LQ  D+SPVS+EL  
Sbjct: 21  LVPPYRQTSSSFSRPRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVELGP 80

Query: 166 ICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNM 225
           IC E  FD+ + DA++  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +DVN 
Sbjct: 81  ICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNA 140

Query: 226 VPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIERE 275
           VP++LV RAG+ KMP IQLW+DG+KQ EVIG +KA+ VVN+V++MIE +
Sbjct: 141 VPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIEND 189

[Close]

BLAST of Lag0040486 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-25
Identity = 52/116 (44.83%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 158 PVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 217
           P ++E++ I +  E D  +  A +  + +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 218 FYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIER 274
           FY +DVN VP  LV R  ++KMP IQLWK+ + ++EVIG +K +LV+ +V+++I +
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINK 208

[Close]

BLAST of Lag0040486 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 3.6e-24
Identity = 53/113 (46.90%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 161 IELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYC 220
           +E++ I S  + D A+  + E K+ +I+ WMA+WCR  IYLKP+LE++A + +P ++FY 
Sbjct: 80  VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRLEKIAGE-FPGVRFYF 139

Query: 221 IDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIER 274
           +DVN VP  +V R  + KMP IQLWKDG+   EVIG +KA+LV+++V++MI++
Sbjct: 140 VDVNKVPQTVVKRGNITKMPTIQLWKDGEWAAEVIGGHKAWLVMDEVREMIQK 191

[Close]

BLAST of Lag0040486 vs. ExPASy Swiss-Prot
Match: P37395 (Thioredoxin OS=Cyanidium caldarium OX=2771 GN=trxA PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.7e-06
Identity = 28/104 (26.92%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 168 SELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVP 227
           ++  F+K +V++E   +LV++ + A WC     + P ++ LA +Y  +++   I+ +  P
Sbjct: 8   TDFSFEKEVVNSE---KLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENP 67

Query: 228 HKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMI 272
             +    G+  +P + L+KDGK+ D VIG      + N ++K +
Sbjct: 68  -SISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107

[Close]

BLAST of Lag0040486 vs. ExPASy Swiss-Prot
Match: P80028 (Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 26/91 (28.57%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 166 ICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNM 225
           I S+  +D  +   +E  + +++ + A WC     + P  E L+ DY  ++ F  +DV+ 
Sbjct: 8   IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA 67

Query: 226 VPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 257
           V   +   AG+  MP   ++KDG K D+++G
Sbjct: 68  VA-AVAEAAGITAMPTFHVYKDGVKADDLVG 97

[Close]

BLAST of Lag0040486 vs. ExPASy TrEMBL
Match: A0A6J1FZ60 (thioredoxin-like 3-2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449247 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 9.8e-94
Identity = 174/196 (88.78%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVL 142
           MVK LP+H GTV SFPK DA FDLPA +L VSG N LPLS+K PPLS KVSATGEKISVL
Sbjct: 1   MVKVLPVHFGTVKSFPKLDARFDLPAAKLTVSGFNRLPLSQKFPPLSLKVSATGEKISVL 60

Query: 143 GAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLK 202
           G WTQES LQFRDESPVSIELKSICSELEFDKAI DAE+R E VI+VWMANWCRNYIYLK
Sbjct: 61  GDWTQESSLQFRDESPVSIELKSICSELEFDKAITDAEKRNEPVIIVWMANWCRNYIYLK 120

Query: 203 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYL 262
           PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKD KKQDEVIGLYKAYL
Sbjct: 121 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDSKKQDEVIGLYKAYL 180

Query: 263 VVNDVQKMIERELTGE 279
           VVNDVQKMIERELTGE
Sbjct: 181 VVNDVQKMIERELTGE 196

[Close]

BLAST of Lag0040486 vs. ExPASy TrEMBL
Match: A0A6J1HTY1 (thioredoxin-like 3-2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466549 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.9e-92
Identity = 172/196 (87.76%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVL 142
           MVK LP+H GT+ SFPK DA FDLPA +L VSG N LPLS+K PPLS KVSATGEKISVL
Sbjct: 1   MVKVLPVHFGTLKSFPKLDARFDLPAAKLTVSGFNRLPLSQKFPPLSLKVSATGEKISVL 60

Query: 143 GAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLK 202
           G WTQES LQF DESPVSIELKSICSELEFDKAI DAE+R E VI+VWMANWCRNYIYLK
Sbjct: 61  GDWTQESSLQFCDESPVSIELKSICSELEFDKAITDAEKRNEPVIIVWMANWCRNYIYLK 120

Query: 203 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYL 262
           PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKD KKQDEVIGLYKAYL
Sbjct: 121 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDSKKQDEVIGLYKAYL 180

Query: 263 VVNDVQKMIERELTGE 279
           VVNDVQKMIERELTGE
Sbjct: 181 VVNDVQKMIERELTGE 196

[Close]

BLAST of Lag0040486 vs. ExPASy TrEMBL
Match: A0A6J1FZ53 (thioredoxin-like 3-2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449247 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 9.2e-92
Identity = 173/196 (88.27%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVL 142
           MVK LP+H GTV SFPK DA FDLPA +L VSG N LPLS+K PPLS KVSATGEKISVL
Sbjct: 1   MVKVLPVHFGTVKSFPKLDARFDLPAAKLTVSGFNRLPLSQKFPPLSLKVSATGEKISVL 60

Query: 143 GAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLK 202
           G WTQES LQFRDESPVSIELKSICSELEFDKAI DAE+R E VI+VWMANWCRNYIYLK
Sbjct: 61  GDWTQESSLQFRDESPVSIELKSICSELEFDKAITDAEKRNEPVIIVWMANWCRNYIYLK 120

Query: 203 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYL 262
           PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA MPAIQLWKD KKQDEVIGLYKAYL
Sbjct: 121 PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA-MPAIQLWKDSKKQDEVIGLYKAYL 180

Query: 263 VVNDVQKMIERELTGE 279
           VVNDVQKMIERELTGE
Sbjct: 181 VVNDVQKMIERELTGE 195

[Close]

BLAST of Lag0040486 vs. ExPASy TrEMBL
Match: A0A5D3CG32 (Thioredoxin-like 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002530 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.7e-91
Identity = 173/202 (85.64%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLP------APRLAVSGHNGLPLSRKIPPLSQKVSATG 142
           MVKALPLHLG V SFPKFD+ FDLP      + RL  SG N LPLSRK PP+ QKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 143 EKISVLGAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCR 202
           EK S+LGAWTQ+S LQFRDESPVSIELKSI SELEFDKAI DAEER ELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 203 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 262
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 263 LYKAYLVVNDVQKMIERELTGE 279
           LYKAYLVVNDV+KMIERELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]

BLAST of Lag0040486 vs. ExPASy TrEMBL
Match: A0A1S3BGQ4 (thioredoxin-like 3-2, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.7e-91
Identity = 173/202 (85.64%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 83  MVKALPLHLGTVNSFPKFDAPFDLP------APRLAVSGHNGLPLSRKIPPLSQKVSATG 142
           MVKALPLHLG V SFPKFD+ FDLP      + RL  SG N LPLSRK PP+ QKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 143 EKISVLGAWTQESPLQFRDESPVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCR 202
           EK S+LGAWTQ+S LQFRDESPVSIELKSI SELEFDKAI DAEER ELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 203 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 262
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 263 LYKAYLVVNDVQKMIERELTGE 279
           LYKAYLVVNDV+KMIERELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]

BLAST of Lag0040486 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 172.2 bits (435), Expect = 6.0e-43
Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 106 LPAPRLAVSGHNGLPLSRKIPPLSQKVSATGEKISVLGAWTQESPLQFRDESPVSIELKS 165
           L  P    S     P + K    + K+    E+I  +    Q+  LQ  D+SPVS+EL  
Sbjct: 21  LVPPYRQTSSSFSRPRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVELGP 80

Query: 166 ICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNM 225
           IC E  FD+ + DA++  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +DVN 
Sbjct: 81  ICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNA 140

Query: 226 VPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIERE 275
           VP++LV RAG+ KMP IQLW+DG+KQ EVIG +KA+ VVN+V++MIE +
Sbjct: 141 VPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIEND 189

[Close]

BLAST of Lag0040486 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-26
Identity = 52/116 (44.83%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 158 PVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 217
           P ++E++ I +  E D  +  A +  + +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 218 FYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIER 274
           FY +DVN VP  LV R  ++KMP IQLWK+ + ++EVIG +K +LV+ +V+++I +
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINK 208

[Close]

BLAST of Lag0040486 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 78.6 bits (192), Expect = 9.0e-15
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 158 PVSIELKSICSELEFDKAIVDAEERKELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 217
           P ++E++ I +  E D  +  A +  + +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 218 FYCIDVNMVPHKLVVRAGLA 238
           FY +DVN VP  LV R  ++
Sbjct: 153 FYYVDVNKVPQTLVKRGNIS 172

The following BLAST results are available for this feature:

BLAST of Lag0040486 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012912.1	1.6e-93	88.78	Thioredoxin-like 3-2, chloroplastic, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022944830.1	2.0e-93	88.78	thioredoxin-like 3-2, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_038891538.1	4.5e-93	87.68	thioredoxin-like 3-2, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_023541920.1	1.0e-92	88.27	thioredoxin-like 3-2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022967023.1	3.8e-92	87.76	thioredoxin-like 3-2, chloroplastic isoform X1 [Cucurbita maxima]	[more]

BLAST of Lag0040486 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZT6	8.4e-42	49.70	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
Q9FG36	1.9e-25	44.83	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	3.6e-24	46.90	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P37395	9.7e-06	26.92	Thioredoxin OS=Cyanidium caldarium OX=2771 GN=trxA PE=3 SV=1	[more]
P80028	1.7e-05	28.57	Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3	[more]

BLAST of Lag0040486 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ60	9.8e-94	88.78	thioredoxin-like 3-2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HTY1	1.9e-92	87.76	thioredoxin-like 3-2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FZ53	9.2e-92	88.27	thioredoxin-like 3-2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3CG32	2.7e-91	85.64	Thioredoxin-like 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475...	[more]
A0A1S3BGQ4	2.7e-91	85.64	thioredoxin-like 3-2, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Lag0040486 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04260.1	6.0e-43	49.70	WCRKC thioredoxin 2	[more]
AT5G06690.1	1.3e-26	44.83	WCRKC thioredoxin 1	[more]
AT5G06690.2	9.0e-15	43.75	WCRKC thioredoxin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 169..260 e-value: 5.7E-9 score: 35.9
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 119..276 score: 8.921217
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 154..269 e-value: 2.6E-12 score: 48.4
None	No IPR available	PANTHER	PTHR47192:SF4	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 113..275
None	No IPR available	CDD	cd02947	TRX_family	coord: 171..272 e-value: 2.78794E-11 score: 56.7977
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 113..275
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 164..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040486.1	Lag0040486.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma