Lag0040473 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040473
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Glycine-rich RNA-binding family protein
Location	chr13: 5166403 .. 5170871 (-)
RNA-Seq Expression	Lag0040473
Synteny	Lag0040473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGAGAGAAGAGTACCGGATATTTGTGGGAGGCTTGTCGTGGGATATCACTGAGCGTCAGCTTGAGAATGCCTTCAGTCGATTCGGCAAAATTATCGATTCTCAGGTTACCCTTTTTCATATACTCGTTGTTTTGTGGTTTGATCTATATGGCTGAAAATCGAAGCAATTGAACTTTGTCTTAACTGAACACGTCGGAATGAGTGATTCATTTATTTCTTATATGAGAAGGAAACGGAGGAAACATGTTAATTGGTTATCATATGGGAAATATAATTTCTGAATTTCCACACCCTTCCCTCTAAATAACCTTGCCCTCTGATCATAACATGTCAAAACACCAGAGGTGAACTGTAAGATTAACTTTTACCATCCATAGTTTTTGTTTTCTCAGCAATTTTTTGGCACCTTTAATTTGTCTCCGACCTCTTCTCTTTCTGATGATGTTTTTTTCCCCTTGTGAATGAGGATGCTGTTAATGAACTGTTTGGGAAGCGGTTTCACTATTCATGTAAAGTTGAATGCACCAAGATGCTGAAGGTCATAGGCTTGTATGTGCTTAAGCATTATCTGATTTAGATCTGCTGGTTAAGAGAAAGTACTACCATCTTGAAATTTGGAATATGGGTTGGCTGCAAACTCAATCTTGTGCTCTAGCTGATTGGGGTTTGGTAGGATTTTAATAAGCAAACTCAGTGACTAATTGGTTGTGTGGGATGAAAGAACCTATCATTCTTTTGCGACAGATAAATGATTTAGAACTAGAGGAACTTTTAACAAGTCACGTGCTGATACCTGCTTGAGCAGACCTTTCTTGTTTTGTTGTTCCTTGATGCTTTTGAAGAGGAAACTGAAGTCTATAAAATGTCTGAGGATCTGACTAATAATTTTTCTAGTATTTGCTCGGAGAATTTTAACTTTCTCTGGATGACTCTTAAAACCTACATCTTATCTTTGGATTAATCTACTTTCGAATGGTATCACTAGAATTTAATGATGAAGGTTGTGTGGTTATATGAGATGATGTACATGGGGCAGAAGATCTGGGCTAGATTATCATATTGACTCAGATAATTGGATTGCAAAATTTCCGAAGCCATCTGTCATTGGATGGAAAGTTTTGTTGTATGAAGATGGTTTCTTACTACTGGCTGCTTCATTGTATTGTTTTCTTCATTTTCCTATCCTTTACTGTGATTATTTTCAAAGTGAGAGATAGCTGGTTTTCTCATTTGCTAATTTCTCACTGGTACTGAGAATTGTCAGTTTGATTCTAAGATGAAGAATACATTAAAGTGGTGCATCCTTTTTGGCTAAGATTTACGATAGCATGCAAGGTACAGTTTTTGGAGATCAATAACCATTTCATCCTTTTGAGTGGACACTGCATCTTTGAATTTCAATTTGCTGAGATGAAGTTGTCAGAGTCCCCTACTTTTCCAGGCATGATCGCAAAGTTGTTCGTACTGTTTTCTGTTTAGTGGTTAATGTGGCTAGAGATTGTACTTGCAATGCCAGGCTAAGCAGTTCAAACATTTGCTGAAGAATTGGCCAAACTGCATTTGTAGTCTTTAGTTTGACATGTTTTCCTCATTGTATGATGTCAGCTGAATTGTAAATGTCAGTTTGAGGGCCTTTCTGATCAGTTGTCTTCTCTGGTGAGCTTGTTAAGATACTATGCAGTGGACATGGACGGTGGACCTTGATGTGGTTATTATTGTCATTTGTACCTTACAGAGCTCTAAAGGCATTTGTTGCTGGACTCCGTTTTCTGTTATGACCAGGCATTTTGAATATCTATTTGTTGGGTATAGTACTGCAGCAGAGCAATTGGATCTGAAGCTAAATTTGAGTTTTATAGGTTCAGTGTTGCAGGTTGGGGTTTTTTTTGATGGGTTATTTAGTGGAATGGATTTAGGTTGTGGAAAACTGAGAAATTATGGGGCTGTAGTTTTTCATTCATTCATTTTCATCCTTTTCCCGTTGTTTGTTCCTCAAGACCAGTCGAGAATGCTGCTGTTTTGTTTTCCTTTTGTATGGTTTGCTAGTTCCCTCATTGTATACTCATTGACAGTACTTTGTGTTAGCAGCGTTCGAATTCCTTGATTATTGATTCTATTTAAACATAAGAGGGGGTGGAAGATGCCCGTAATTTAGTACAGCCTCTTGTCCACAAACTGAGGGATCTCAATTACACAATGAGCTGGCATCTCCATTGCTTGAAATTTTACTGTCTTGGTGAACCTTGCCTACATCTCCTAGAGTATTCATCCTGGAACATGTGTTGCTTAAGGAATCGTCTTTCTTTCTTGAGCTTTATTCCATCATCTATTTCACATCACTTCCCAAGTGGTATTGATCGTGTGACAGCAAGATGACTGTAAACTTCTTGAGTTTCTCTGATGTATAATTTGTCGAGGTTTTCAAATCCCTTAGTTGGAGTAATACACATCCAGTGAAGTGTTTCTTCTGGTATTTTTTTGAGTTAACATTGACTTTGAGTGCCATTTTGGATGCCTGACTGCACAGAAGCCCATGTAGCCATTTTTTTATGGAATTGTTTCTTTTGAATAAAAGGGGACTAGAGGTCTAAGATACTCCCACTTCAGAAGATAGCTAAAGATGTGCAGGTTCTTTTGTTTTGTTAAGGAATTATGTAACATGTTGCAATGAGTTCTTCATAACTGGAAGAAAAAAGTAAGTTGTCAGACTGTTTAGTTATATATTTTGAAATATTTTTACGCTGTTACTATCGATTACTATAAGTTTAAACTTTGAATGAATTCTCTCTTTGATGTTTTACTTTTTATCGTCTATACAGCATGTGATAGACTGAATGTCATCACCAGCTTGTACCCATAACGTATTCTATTATTCTGCATTCTCTTAATGCAATGTAGGTCTGTAACCATATTTGCTGAATGATAATCTGATGGAGTTTTAACCTCTATTCTTATTAGTTGTTGGAGTTTGAAACCTCTAACTTGTAGATCATGGCAACTGTTTGGGATTGATTTTATACCTCTGGATGATGTCATGATTGTGTTTGTGGCTTCAAGCCCAAGATTGGGTTTATTTCCAATGCTCTTACATTAATCTCGTGTTCATAAACTCTGAACTTTTAAGGGTTGTCACCTGGGATCTTAAATACCAAAACAAATCCACCTTATATTGGTGGTGGTTAGGCCATAGAGTTCATCTCAAAATCTGTCATCTTTGAATTTTGAGGAGGTGGGAATTCTGGGCTAGTTATTTATATTTAATTTTGGTGGACTTGATCCCTGTATCTTTGATGCCAATTTTTGTTATGTTAGTAAAATATTCAAACTATGCTGATGGCTGGTAGGGTTTAAGTTGTAACTTAGTATATATTATTAGCATGCGATGTACTTTACTTGCTCTGGTTTAATCACTTGATTTAAGTTTTATTGGCTGTTCAATTGATTGGTGCAAACATCCTCTTTGGCGTTCCTGTAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGGTTTATTACATTTTCAGATCGCCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAAGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATAGACCATGGTTACAGGGGGGAGGCTACTCAACTGGTGGCAGGGGTAACTATGGGGGTGGGGAGGAGATAGATCTGCAAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTGGGTGGTGGCCGTGGAAGGGGAGGAGACTCATTTCTTGCACGTTCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGCGGTGGGCGCTTTGGAGATAGAGATCGTTTTGACAGCAGCAGGGACAACAAATATGGAGGACGTGATCGCTATGTTAGCGACAGGTACTGACCAATACTTTCTATGGATTTGAGGCATTATTCTCCTTGTATAGAATATCTTTGATGATGATAGTGGTTATTTTTCTTAGTCTTAAAATTAATGCTTTTAAAGTAATTATCACAAGGAAATGATAAATTGACAAAAGAGTGATCCAATATCGTTTCTCTTGCTGATTGTGACTTCACAATTATTTACTTTCAGCATCATAGTTAATTAATCCTCTCGTTCCATATACGCAAATCTGCAGGTACCCACCTGGTGGAGATCGCTTTGGAAGCAGTCGGTACAATAATGATTCTGATCGATTTCCTGTAAATGGCTATGGCAAAGATAGGGGCTATTATAGAGATGGTGGACCTCGTGGGGTTGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGGAACAGACCAGCTCCTTATGATCGCCCAAGCAGAGCAGGGCGGCCTTCATCATATGATCGTTATTGA

mRNA sequence

ATGGCTGGGAGAGAAGAGTACCGGATATTTGTGGGAGGCTTGTCGTGGGATATCACTGAGCGTCAGCTTGAGAATGCCTTCAGTCGATTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGGTTTATTACATTTTCAGATCGCCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAAGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATAGACCATGTGGGTGGTGGCCGTGGAAGGGGAGGAGACTCATTTCTTGCACGTTCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGCGGTGGGCGCTTTGGAGATAGAGATCGTTTTGACAGCAGCAGGGACAACAAATATGGAGGACGTGATCGCTATGTTAGCGACAGGTACCCACCTGGTGGAGATCGCTTTGGAAGCAGTCGGTACAATAATGATTCTGATCGATTTCCTGTAAATGGCTATGGCAAAGATAGGGGCTATTATAGAGATGGTGGACCTCGTGGGGTTGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGGAACAGACCAGCTCCTTATGATCGCCCAAGCAGAGCAGGGCGGCCTTCATCATATGATCGTTATTGA

Coding sequence (CDS)

ATGGCTGGGAGAGAAGAGTACCGGATATTTGTGGGAGGCTTGTCGTGGGATATCACTGAGCGTCAGCTTGAGAATGCCTTCAGTCGATTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGGTTTATTACATTTTCAGATCGCCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAAGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATAGACCATGTGGGTGGTGGCCGTGGAAGGGGAGGAGACTCATTTCTTGCACGTTCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGCGGTGGGCGCTTTGGAGATAGAGATCGTTTTGACAGCAGCAGGGACAACAAATATGGAGGACGTGATCGCTATGTTAGCGACAGGTACCCACCTGGTGGAGATCGCTTTGGAAGCAGTCGGTACAATAATGATTCTGATCGATTTCCTGTAAATGGCTATGGCAAAGATAGGGGCTATTATAGAGATGGTGGACCTCGTGGGGTTGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGGAACAGACCAGCTCCTTATGATCGCCCAAGCAGAGCAGGGCGGCCTTCATCATATGATCGTTATTGA

Protein sequence

MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDIDHVGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSYDRY

Homology

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BLAST of Lag0040473 vs. NCBI nr
Match: XP_022956605.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 455.3 bits (1170), Expect = 3.3e-124
Identity = 231/270 (85.56%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHG+EFGERIISVNKAEPKMGEDIDH                           
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDRSARQDECFKCGRHGHWARD 120

Query: 121 ---VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSRDN 180
              VGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD+SRD+
Sbjct: 121 CPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDS 180

Query: 181 KYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP 240
           KYG RDRYVS+RYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP
Sbjct: 181 KYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP 240

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BLAST of Lag0040473 vs. NCBI nr
Match: XP_023003387.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 454.9 bits (1169), Expect = 4.3e-124
Identity = 230/270 (85.19%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHG+EFGERIISVNKAEPKMGEDIDH                           
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDRSARQDECFKCGRHGHWARD 120

Query: 121 ---VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSRDN 180
              VGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD+SRD+
Sbjct: 121 CPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDS 180

Query: 181 KYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP 240
           KYG RDRYVS+RYPPGGDRFGSSRYNNDSDRFP+NGYGKDRGYYRDGGPRGVDKYGSGGP
Sbjct: 181 KYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGP 240

[Close]

BLAST of Lag0040473 vs. NCBI nr
Match: XP_023535688.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-123
Identity = 229/270 (84.81%), Postives = 234/270 (86.67%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHG+EFGERIISVNKAEPKMGEDIDH                           
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDRSARQDECFKCGRHGHWARD 120

Query: 121 ---VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSRDN 180
              VGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD+SRD+
Sbjct: 121 CPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDS 180

Query: 181 KYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP 240
           KYG RDRYVS+RYPPGGDRFGSSRYNNDSDRFP NGYGKDRGYYRDGGPRGVDKYGSGGP
Sbjct: 181 KYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPTNGYGKDRGYYRDGGPRGVDKYGSGGP 240

[Close]

BLAST of Lag0040473 vs. NCBI nr
Match: XP_038892830.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida])

HSP 1 Score: 448.7 bits (1153), Expect = 3.1e-122
Identity = 232/287 (80.84%), Postives = 238/287 (82.93%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHGQEFGERIISVNKAEPKMGED+DH                           
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120

Query: 121 -------------------VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEG 180
                              VGGGRGRGGDSFLAR+RLGDSDRGDRFAGDNNRYVDDRYEG
Sbjct: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180

Query: 181 GGRFGDRDRFD-SSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240
           GGRFGDRDRFD SSRDNKYG RDRYVS+RYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY
Sbjct: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240

[Close]

BLAST of Lag0040473 vs. NCBI nr
Match: KAE8648851.1 (hypothetical protein Csa_008374 [Cucumis sativus])

HSP 1 Score: 446.0 bits (1146), Expect = 2.0e-121
Identity = 231/286 (80.77%), Postives = 236/286 (82.52%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 424 MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 483

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHGQEFGERIISVNKAEPKMGED+DH                           
Sbjct: 484 MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 543

Query: 121 ------------------VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
                             VGGGRGRGGDSFLARSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 544 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 603

Query: 181 GRFGDRDRFD-SSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD SSRDNKYG RDRYVSDRYPPGGDRFGSSRY NDSDRFPVNGYGKDRGYY
Sbjct: 604 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 663

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BLAST of Lag0040473 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 144/288 (50.00%), Postives = 174/288 (60.42%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDIDHV--GGG---RGRG--------------- 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D +  GGG   RG+G               
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRRPGHWA 127

Query: 123 ------GDS-------FLARSRLGDSD-RGDRFAGDN------------NRYVDDRYE-G 182
                 GD           RSR+GD D   DR+ GD             +RY+D R +  
Sbjct: 128 RDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLEREREREREFDRYMDGRRDRD 187

Query: 183 GGRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYY 241
           GGR+  RDRFDS   +KY  RD Y  +RY P GDRF S RY            G++R Y 
Sbjct: 188 GGRYSYRDRFDSG--DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLENEYRGRERSYD 247

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BLAST of Lag0040473 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.7e-54
Identity = 144/312 (46.15%), Postives = 178/312 (57.05%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AFSRFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED------------------------------ 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D                              
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 -------------IDH-------VGGGRGR--GGDSFLARSRLGDSDRGDRFAG-----D 180
                        + H        GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 NNRYVDDRYEGGGRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRF-GSSRYNNDSDRF 240
             RY+DDRY+G  R+G RDRFDS     Y  RDRY SDRY    DRF G  RY+  SDR+
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR--EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDRY 240

[Close]

BLAST of Lag0040473 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.1e-29
Identity = 96/258 (37.21%), Postives = 138/258 (53.49%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDHVGGGRGRGGDSFLARSRLGDSDR---- 120
           MD+AI  M+G +   R I+V+KA+P          GG GR  D    R R  D DR    
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQ--------GGAGRDNDGDRGRDRGYDRDRSRPS 120

Query: 121 GDRFAGD-----------NNRYVDDRYEGGGRFGDRDRFDSSRDNKYGGRDRYVSDRYPP 180
           G R  GD                +   +GGGRF  +D   SS+D++YG +D    DRY  
Sbjct: 121 GGRGGGDCFKCGKPGHFARECPSESSRDGGGRFSSKDDRYSSKDDRYGAKD----DRYGA 180

Query: 181 GGDRFGS--SRYNNDSDRFPVNGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR--- 233
             DR+G+   RY++  DR+       DR   RDGG    G D+ G  +GG +RD G    
Sbjct: 181 KEDRYGAKDDRYSSKDDRYSSK---DDRYGSRDGGGSRYGPDRSGERAGGRSRDGGSRGA 240

[Close]

BLAST of Lag0040473 vs. ExPASy Swiss-Prot
Match: Q05966 (Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21
Identity = 76/196 (38.78%), Postives = 97/196 (49.49%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   + +LE  FS+FG++IDS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 64

Query: 66  REMHGQEFGERIISVNKAEPKMGEDIDHVGGGRGRGGDSFLARSRLGDSDRGDRFAGDNN 125
            EM+G+E   R I+VN+A+ + G      GGG GRGG  +  R        G  + G   
Sbjct: 65  DEMNGKELDGRTITVNEAQSRGG------GGGGGRGGGGYGGRG-------GGGYGGGGG 124

Query: 126 RYVDDRYEGGGRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVN 185
            Y D R  GGG +G             GGR          GG   G   Y     R    
Sbjct: 125 GYGDRR--GGGGYGSGG----------GGRG--------GGGYGSGGGGYGGGGGRRDGG 167

Query: 186 GYGKDRGYYRDGGPRG 202
           GYG   G Y  G   G
Sbjct: 185 GYGGGDGGYGGGSGGG 167

[Close]

BLAST of Lag0040473 vs. ExPASy Swiss-Prot
Match: Q43472 (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.9e-21
Identity = 67/169 (39.64%), Postives = 91/169 (53.85%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL W   ++ L+NAFS++G +IDS+I+ ++ TGR RGFGF+TF+    M  AI
Sbjct: 5   EYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 64

Query: 66  REMHGQEFGERIISVNKAEPKMGEDIDHVGGGRGRGGDSFLARSRLGDSDRGDRFAGDNN 125
             M+GQ+   R I+VN+A+ +  +     GGG G GG  +  + R G    G  + G   
Sbjct: 65  EAMNGQDLDGRNITVNEAQSRRSDG----GGGFGGGGGGYGGQRREGG---GGGYGGGGG 124

Query: 126 RYVDDRYEGGGRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRFGSSR 175
            Y   R  GGG +G       SRD   GG        Y  GG  +G SR
Sbjct: 125 GYGGGRSGGGGGYG-------SRDGGGGG--------YGGGGGGYGGSR 151

[Close]

BLAST of Lag0040473 vs. ExPASy TrEMBL
Match: A0A6J1GY86 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458292 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.6e-124
Identity = 231/270 (85.56%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHG+EFGERIISVNKAEPKMGEDIDH                           
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDRSARQDECFKCGRHGHWARD 120

Query: 121 ---VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSRDN 180
              VGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD+SRD+
Sbjct: 121 CPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDS 180

Query: 181 KYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP 240
           KYG RDRYVS+RYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP
Sbjct: 181 KYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP 240

[Close]

BLAST of Lag0040473 vs. ExPASy TrEMBL
Match: A0A6J1KMD7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496986 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124
Identity = 230/270 (85.19%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHG+EFGERIISVNKAEPKMGEDIDH                           
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDRSARQDECFKCGRHGHWARD 120

Query: 121 ---VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSRDN 180
              VGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD+SRD+
Sbjct: 121 CPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDS 180

Query: 181 KYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGP 240
           KYG RDRYVS+RYPPGGDRFGSSRYNNDSDRFP+NGYGKDRGYYRDGGPRGVDKYGSGGP
Sbjct: 181 KYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGP 240

[Close]

BLAST of Lag0040473 vs. ExPASy TrEMBL
Match: A0A1S3BGN5 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489439 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 231/285 (81.05%), Postives = 234/285 (82.11%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHGQEFGERIISVNKAEPKMGED+DH                           
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 -----------------VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180
                            VGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRYEGGG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFD-SSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYR 240
           RFGDRDRFD SSRDNKYG RDRYVSDRYPPGGDRFGS RYNNDSDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

[Close]

BLAST of Lag0040473 vs. ExPASy TrEMBL
Match: A0A5D3CG30 (Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002430 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 231/285 (81.05%), Postives = 234/285 (82.11%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHGQEFGERIISVNKAEPKMGED+DH                           
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 -----------------VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGG 180
                            VGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRYEGGG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFD-SSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYYR 240
           RFGDRDRFD SSRDNKYG RDRYVSDRYPPGGDRFGS RYNNDSDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

[Close]

BLAST of Lag0040473 vs. ExPASy TrEMBL
Match: A0A6J1CFE7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 230/301 (76.41%), Postives = 232/301 (77.08%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDH--------------------------- 120
           MDDAIREMHGQE GERIISVNKAEPKMGEDIDH                           
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120

Query: 121 ------------------VGGGRGRGGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
                             VGGGRGR GDSFLARSRLGDSDRGDRFAGDNNRYVDDRYE G
Sbjct: 121 DECFKCGRLGHWARDCHSVGGGRGR-GDSFLARSRLGDSDRGDRFAGDNNRYVDDRYE-G 180

Query: 181 GRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRG--- 240
           GRFGDRDRFDSSRDNKY  RDRYVSDRYPP GDRFGSS YNNDSDRFPVNGYGKDRG   
Sbjct: 181 GRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYR 240

[Close]

BLAST of Lag0040473 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56
Identity = 144/288 (50.00%), Postives = 174/288 (60.42%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDIDHV--GGG---RGRG--------------- 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D +  GGG   RG+G               
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRRPGHWA 127

Query: 123 ------GDS-------FLARSRLGDSD-RGDRFAGDN------------NRYVDDRYE-G 182
                 GD           RSR+GD D   DR+ GD             +RY+D R +  
Sbjct: 128 RDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLEREREREREFDRYMDGRRDRD 187

Query: 183 GGRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYY 241
           GGR+  RDRFDS   +KY  RD Y  +RY P GDRF S RY            G++R Y 
Sbjct: 188 GGRYSYRDRFDSG--DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLENEYRGRERSYD 247

[Close]

BLAST of Lag0040473 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56
Identity = 144/288 (50.00%), Postives = 174/288 (60.42%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDIDHV--GGG---RGRG--------------- 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D +  GGG   RG+G               
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRRPGHWA 127

Query: 123 ------GDS-------FLARSRLGDSD-RGDRFAGDN------------NRYVDDRYE-G 182
                 GD           RSR+GD D   DR+ GD             +RY+D R +  
Sbjct: 128 RDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLEREREREREFDRYMDGRRDRD 187

Query: 183 GGRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYY 241
           GGR+  RDRFDS   +KY  RD Y  +RY P GDRF S RY            G++R Y 
Sbjct: 188 GGRYSYRDRFDSG--DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLENEYRGRERSYD 247

[Close]

BLAST of Lag0040473 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 213.0 bits (541), Expect = 2.6e-55
Identity = 144/312 (46.15%), Postives = 178/312 (57.05%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AFSRFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED------------------------------ 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D                              
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 -------------IDH-------VGGGRGR--GGDSFLARSRLGDSDRGDRFAG-----D 180
                        + H        GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 NNRYVDDRYEGGGRFGDRDRFDSSRDNKYGGRDRYVSDRYPPGGDRF-GSSRYNNDSDRF 240
             RY+DDRY+G  R+G RDRFDS     Y  RDRY SDRY    DRF G  RY+  SDR+
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR--EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDRY 240

[Close]

BLAST of Lag0040473 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-30
Identity = 96/258 (37.21%), Postives = 138/258 (53.49%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDIDHVGGGRGRGGDSFLARSRLGDSDR---- 120
           MD+AI  M+G +   R I+V+KA+P          GG GR  D    R R  D DR    
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQ--------GGAGRDNDGDRGRDRGYDRDRSRPS 120

Query: 121 GDRFAGD-----------NNRYVDDRYEGGGRFGDRDRFDSSRDNKYGGRDRYVSDRYPP 180
           G R  GD                +   +GGGRF  +D   SS+D++YG +D    DRY  
Sbjct: 121 GGRGGGDCFKCGKPGHFARECPSESSRDGGGRFSSKDDRYSSKDDRYGAKD----DRYGA 180

Query: 181 GGDRFGS--SRYNNDSDRFPVNGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR--- 233
             DR+G+   RY++  DR+       DR   RDGG    G D+ G  +GG +RD G    
Sbjct: 181 KEDRYGAKDDRYSSKDDRYSSK---DDRYGSRDGGGSRYGPDRSGERAGGRSRDGGSRGA 240

[Close]

BLAST of Lag0040473 vs. TAIR 10
Match: AT2G21660.2 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 99.4 bits (246), Expect = 4.3e-21
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 2   AGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGM 61
           +G  EYR FVGGL+W   +R LE AF+++G +IDS+I+ ++ TGR RGFGF+TF D + M
Sbjct: 3   SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62

Query: 62  DDAIREMHGQEFGERIISVNKAEPKMGEDIDHVGGGRGRGGDSFLARSRLGDSDRGDRFA 121
            DAI  M+GQ+   R I+VN+A+ +        GGG  RGG S+      G  + G  ++
Sbjct: 63  KDAIEGMNGQDLDGRSITVNEAQSR-----GSGGGGGHRGGGSYGGGG--GRREGGGGYS 122

Query: 122 GDNNRYVDDRYEGGGRFGDRDR-----FDSSRDNKYGG 155
           G    Y   R  GGG +G   R     +       YGG
Sbjct: 123 GGGGGY-SSRGGGGGSYGGGRREGGGGYGGGEGGGYGG 152

The following BLAST results are available for this feature:

BLAST of Lag0040473 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956605.1	3.3e-124	85.56	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata]	[more]
XP_023003387.1	4.3e-124	85.19	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita maxima]	[more]
XP_023535688.1	2.8e-123	84.81	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita pepo subsp. pep...	[more]
XP_038892830.1	3.1e-122	80.84	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]	[more]
KAE8648851.1	2.0e-121	80.77	hypothetical protein Csa_008374 [Cucumis sativus]	[more]

BLAST of Lag0040473 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22703	1.5e-55	50.00	Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE...	[more]
Q8RWN5	3.7e-54	46.15	Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE...	[more]
Q9LIN3	7.1e-29	37.21	Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE...	[more]
Q05966	1.4e-21	38.78	Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1	[more]
Q43472	1.9e-21	39.64	Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=...	[more]

BLAST of Lag0040473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY86	1.6e-124	85.56	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KMD7	2.1e-124	85.19	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A1S3BGN5	1.1e-120	81.05	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3CG30	1.1e-120	81.05	Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A6J1CFE7	1.3e-115	76.41	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=...	[more]

BLAST of Lag0040473 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60650.1	1.1e-56	50.00	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT1G60650.2	1.1e-56	50.00	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT5G04280.1	2.6e-55	46.15	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT3G26420.1	5.0e-30	37.21	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G21660.2	4.3e-21	39.87	cold, circadian rhythm, and rna binding 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 e-value: 8.7E-29 score: 111.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..78 e-value: 1.4E-20 score: 72.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..85 score: 19.570105
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..103 e-value: 1.7E-28 score: 101.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..163
None	No IPR available	PANTHER	PTHR15241:SF294	GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKE	coord: 92..201
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 92..201
None	No IPR available	PANTHER	PTHR15241:SF294	GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKE	coord: 1..97
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 1..97
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040473.1	Lag0040473.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding