Lag0040365 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040365
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr13: 4210737 .. 4213240 (-)
RNA-Seq Expression	Lag0040365
Synteny	Lag0040365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCGTGTGCGGTATTGAGAACAATAAGGTGTGTTCTTTGTTTCTCTCTTGTTTGTGCATATGTTAGTTTAGTTTCATGGAGTAGTATCTGCTCATTTCTCGTTTTAATTTTGGAGAGGAAGGGATGTTCTGTGACTTGTTGCAGTGAGGACAGATTGGAAGTGTGTGAAAAGTGAATTATTGGTGAGAGTCACTTCTGAAGGAAAGAGGCTTATTTTCTGAACCAAGATTGTTTTATTCAGAGGTAGATTTTTGCAGGTTTTGGAGCCACCGTTGGTGTTCCATACTTACCAAGTGTTGTCCATTGAGCAATTTAAAGCCTCTGGGCTTAGATTCTACCTCAATGCAGTCTTGTAAGATTGAGTGCTATCAATATAGGCGATCCTTTTTTTTGTTCTTTTTGTCGTGATGGTTGATGTCTTGAGCTGACTGGTGCCCAAAAGCCATGGATTGCGGCTTAGTTGAGAGTTTTAGGTTAGGGTGGGGAGTAAAAAGTTTCATCTTGCTCATTTTGACTTTCTTTTCAACAAAATTCTTCGTTTCATTGCACTGATCTTCATTCTCAAACGTTATAGAGACAAATCCTCTGTGGCCAGAGTAGATTATGATCTTGTTAAGCTTGCTATAGGCAAAAGAATTTAAATTTCTTCTTGTTCTCTTGATATGATGTATGTAAAAGTAATTTTGTCTTCAACTTTAATATTTTAACGTATCTAGCTCAAAATCCATTTCATTTTTATTCCTACTTTTGTATTTTTAATTGGTTTGTTATATCTGGACATATTGTTTGATTTGAAAGACATCTTTTGAACAAATCTACTTTCCAGTTTTAGAAAGGTTAAGATCTTTGATGGTTATGTGTAATTTCAGCTTCAAAACCAAGGCCTTGATATCCACAAGGAAGGCAAGTGCCTTGTGCTTCCTGTTCAAGATGTGGCATCAGGTAACAAATGCAAAGGGAGATTTTTTTTTTGGTGACAACAACAAGAGCAAATTCACAAATGGTGGCAGCTCTCCAGAGAGCTCACGACAAACCTTGCCAATGAGGACAGGACATTCCCATCCAATTTACAATACCGAGCACCTTGAGACAGATGAGTTTAGGCCACGGTTAGAATTTAACGATGTGCAGTTTGTGGATAAGCCTAATAGAATTAAGCAGCTTGTAGAGAGGGATGCTGCTATAGAGGTTCCTGTCTGGTTGACGTACACATCTGACAATAATGTGGACCAAGCGAGTATTATTGCAACCTTATTGATGAATTGTACTAATTTATTAGAATTGTATCAAATTCATGCCCATGTTTTAAGAACCAACATGTTGGAAAACCACCCTTCTTCATTTTACTGGAACAACATCATTAGATCATATACTAGGCTGGAGGCCCCAAGAAAAGCCCTCTCTGTATATATCGCCATGTTGCGAGCAGGCATTTTGCCTGATTCTTATACACTCCCAATTGTATTTAAGGCTCTATCACTAGTTTATGCTCTTGGTTTAGGATTACAATTACATTCAGTTGCAATACGGCTTGGTCTTGAGTTCGACCAATATAGCGAAAGCGGCCTCATCAGTCTGTATTCGAAGGCAGGAGATTTTGAGTGTGCACGTAAGGTGTTTGAGCAAAATCATCACAGAAAATTGGGTTCTTGGAATGCTATTATAGCCGGCTTATCTCAAGGCGGGCGTGCTAAAGAGGCAGTTGATATGTTCATTAAGTTTAGACGAAGTGGGTTTGAACCAGATAATGTTACAATTGTTAGTGTAACATCAGCTTGTGGCAGTCTAGGCGACCTAGATTTATCTCTCCAAATGCACAAATTTGTGTTCCAAGTTAAAGTCACAGGAAAATCAGACATTTTGATGTTGAATTCCCTCATAGACATGTATGGAAAATGTGGTAGGATGGACTTAGCACTGAAAGTATTTTCAAACATGGATCATCGGAATGTATCATCCTGGACATCTCTGATTGTAGGTTATGCAATGCATGGACAGGTGAAACAAGCGCTCGAGAACTTCCAATGCATGAGAGAAGCTGGAGTCCCTCCTAATAATGTTACATTCGTCGGAGTGCTGAGCGCGTGTGTACACGGTGGGATGATCAAAGAGGGAAGACATTACTTCGATATGATGAAAAGCGTTTACGGTTTCAAGCCCCAGCTGCCACATTATGGATGCATGGTCGATTTGCTCGGTAAAGCGGGGTTGCTTGAAGAGGCGAGAAGGATGATCGAAGAGATGCCGATGAAGGCGAACTCGGTAATATGGGGATGTTTGATTGGGGCCTGTGAGAAACATGGGAATGTGGAGATGGGGGAGTGGGCAGCAAAGCATTTACAGGAATTGGAGCCTTGGAATGATGGTGTTTATGTGGTTCTGTCCAATATTTATGCCAGCAATGGCTTGTGGAAAGAGGCTCAGAAGGTGAGAGAGATTATGAAACAGAGGCAGCTTGCTAAGGTTCCTGGATATAGCTTGGCAACAAGATTAGATTGA

mRNA sequence

ATGAGTTCGTGTGCGGTATTGAGAACAATAAGCTTCAAAACCAAGGCCTTGATATCCACAAGGAAGGCAAGTGCCTTGTGCTTCCTGTTCAAGATGTGGCATCAGGTAACAAATGCAAAGGGAGATTTTTTTTTTGGTGACAACAACAAGAGCAAATTCACAAATGGTGGCAGCTCTCCAGAGAGCTCACGACAAACCTTGCCAATGAGGACAGGACATTCCCATCCAATTTACAATACCGAGCACCTTGAGACAGATGAGTTTAGGCCACGGTTAGAATTTAACGATGTGCAGTTTGTGGATAAGCCTAATAGAATTAAGCAGCTTGTAGAGAGGGATGCTGCTATAGAGGTTCCTGTCTGGTTGACGTACACATCTGACAATAATGTGGACCAAGCGAGTATTATTGCAACCTTATTGATGAATTGTACTAATTTATTAGAATTGTATCAAATTCATGCCCATGTTTTAAGAACCAACATGTTGGAAAACCACCCTTCTTCATTTTACTGGAACAACATCATTAGATCATATACTAGGCTGGAGGCCCCAAGAAAAGCCCTCTCTGTATATATCGCCATGTTGCGAGCAGGCATTTTGCCTGATTCTTATACACTCCCAATTGTATTTAAGGCTCTATCACTAGTTTATGCTCTTGGTTTAGGATTACAATTACATTCAGTTGCAATACGGCTTGGTCTTGAGTTCGACCAATATAGCGAAAGCGGCCTCATCAGTCTGTATTCGAAGGCAGGAGATTTTGAGTGTGCACGTAAGGTGTTTGAGCAAAATCATCACAGAAAATTGGGTTCTTGGAATGCTATTATAGCCGGCTTATCTCAAGGCGGGCGTGCTAAAGAGGCAGTTGATATGTTCATTAAGTTTAGACGAAGTGGGTTTGAACCAGATAATGTTACAATTGTTAGTGTAACATCAGCTTGTGGCAGTCTAGGCGACCTAGATTTATCTCTCCAAATGCACAAATTTGTGTTCCAAGTTAAAGTCACAGGAAAATCAGACATTTTGATGTTGAATTCCCTCATAGACATGTATGGAAAATGTGGTAGGATGGACTTAGCACTGAAAGTATTTTCAAACATGGATCATCGGAATGTATCATCCTGGACATCTCTGATTGTAGGTTATGCAATGCATGGACAGGTGAAACAAGCGCTCGAGAACTTCCAATGCATGAGAGAAGCTGGAGTCCCTCCTAATAATGTTACATTCGTCGGAGTGCTGAGCGCGTGTGTACACGGTGGGATGATCAAAGAGGGAAGACATTACTTCGATATGATGAAAAGCGTTTACGGTTTCAAGCCCCAGCTGCCACATTATGGATGCATGGTCGATTTGCTCGGTAAAGCGGGGTTGCTTGAAGAGGCGAGAAGGATGATCGAAGAGATGCCGATGAAGGCGAACTCGGTAATATGGGGATGTTTGATTGGGGCCTGTGAGAAACATGGGAATGTGGAGATGGGGGAGTGGGCAGCAAAGCATTTACAGGAATTGGAGCCTTGGAATGATGGTGTTTATGTGGTTCTGTCCAATATTTATGCCAGCAATGGCTTGTGGAAAGAGGCTCAGAAGGTGAGAGAGATTATGAAACAGAGGCAGCTTGCTAAGGTTCCTGGATATAGCTTGGCAACAAGATTAGATTGA

Coding sequence (CDS)

ATGAGTTCGTGTGCGGTATTGAGAACAATAAGCTTCAAAACCAAGGCCTTGATATCCACAAGGAAGGCAAGTGCCTTGTGCTTCCTGTTCAAGATGTGGCATCAGGTAACAAATGCAAAGGGAGATTTTTTTTTTGGTGACAACAACAAGAGCAAATTCACAAATGGTGGCAGCTCTCCAGAGAGCTCACGACAAACCTTGCCAATGAGGACAGGACATTCCCATCCAATTTACAATACCGAGCACCTTGAGACAGATGAGTTTAGGCCACGGTTAGAATTTAACGATGTGCAGTTTGTGGATAAGCCTAATAGAATTAAGCAGCTTGTAGAGAGGGATGCTGCTATAGAGGTTCCTGTCTGGTTGACGTACACATCTGACAATAATGTGGACCAAGCGAGTATTATTGCAACCTTATTGATGAATTGTACTAATTTATTAGAATTGTATCAAATTCATGCCCATGTTTTAAGAACCAACATGTTGGAAAACCACCCTTCTTCATTTTACTGGAACAACATCATTAGATCATATACTAGGCTGGAGGCCCCAAGAAAAGCCCTCTCTGTATATATCGCCATGTTGCGAGCAGGCATTTTGCCTGATTCTTATACACTCCCAATTGTATTTAAGGCTCTATCACTAGTTTATGCTCTTGGTTTAGGATTACAATTACATTCAGTTGCAATACGGCTTGGTCTTGAGTTCGACCAATATAGCGAAAGCGGCCTCATCAGTCTGTATTCGAAGGCAGGAGATTTTGAGTGTGCACGTAAGGTGTTTGAGCAAAATCATCACAGAAAATTGGGTTCTTGGAATGCTATTATAGCCGGCTTATCTCAAGGCGGGCGTGCTAAAGAGGCAGTTGATATGTTCATTAAGTTTAGACGAAGTGGGTTTGAACCAGATAATGTTACAATTGTTAGTGTAACATCAGCTTGTGGCAGTCTAGGCGACCTAGATTTATCTCTCCAAATGCACAAATTTGTGTTCCAAGTTAAAGTCACAGGAAAATCAGACATTTTGATGTTGAATTCCCTCATAGACATGTATGGAAAATGTGGTAGGATGGACTTAGCACTGAAAGTATTTTCAAACATGGATCATCGGAATGTATCATCCTGGACATCTCTGATTGTAGGTTATGCAATGCATGGACAGGTGAAACAAGCGCTCGAGAACTTCCAATGCATGAGAGAAGCTGGAGTCCCTCCTAATAATGTTACATTCGTCGGAGTGCTGAGCGCGTGTGTACACGGTGGGATGATCAAAGAGGGAAGACATTACTTCGATATGATGAAAAGCGTTTACGGTTTCAAGCCCCAGCTGCCACATTATGGATGCATGGTCGATTTGCTCGGTAAAGCGGGGTTGCTTGAAGAGGCGAGAAGGATGATCGAAGAGATGCCGATGAAGGCGAACTCGGTAATATGGGGATGTTTGATTGGGGCCTGTGAGAAACATGGGAATGTGGAGATGGGGGAGTGGGCAGCAAAGCATTTACAGGAATTGGAGCCTTGGAATGATGGTGTTTATGTGGTTCTGTCCAATATTTATGCCAGCAATGGCTTGTGGAAAGAGGCTCAGAAGGTGAGAGAGATTATGAAACAGAGGCAGCTTGCTAAGGTTCCTGGATATAGCTTGGCAACAAGATTAGATTGA

Protein sequence

MSSCAVLRTISFKTKALISTRKASALCFLFKMWHQVTNAKGDFFFGDNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQFVDKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYASNGLWKEAQKVREIMKQRQLAKVPGYSLATRLD

Homology

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BLAST of Lag0040365 vs. NCBI nr
Match: XP_022968169.1 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 936.4 bits (2419), Expect = 1.1e-268
Identity = 455/514 (88.52%), Postives = 483/514 (93.97%), Query Frame = 0


Query: 40  KGDFFFGDNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQF 99
           +G F +GDNNKSKFTN GSS +SS QTL MR GHS PIYNT+HL TD+FRP +EFNDV+F
Sbjct: 101 EGRFAYGDNNKSKFTNAGSSSDSSLQTLLMRGGHSPPIYNTKHLATDDFRPLVEFNDVRF 160

Query: 100 VDKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCTNLLELYQIHAHVLRT 159
           +DK    KQL ERDA I+ P+W TYTSDNNVDQ SI+ATL+MNCT+LLEL QIHAH+LRT
Sbjct: 161 IDKLKINKQLAERDARIDTPIWSTYTSDNNVDQVSIVATLVMNCTHLLELSQIHAHILRT 220

Query: 160 NMLENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYAL 219
           NMLEN+PSSF WNNIIRSYTRLEAPRKALSVYIAMLRAG+ PDSYTLPIVFKALSLVYA 
Sbjct: 221 NMLENYPSSFSWNNIIRSYTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAF 280

Query: 220 GLGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGL 279
           GLGLQLHSVAIRLGLEFDQYSESGLISLYSK GD ECARKVFE+NHHRKLGSWNAIIAGL
Sbjct: 281 GLGLQLHSVAIRLGLEFDQYSESGLISLYSKLGDLECARKVFEKNHHRKLGSWNAIIAGL 340

Query: 280 SQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKS 339
           SQGGRAKEAVDMFIK RRSG EPD+VTIVSVTSACGSLGDL+LSLQMHKFVFQVKV GKS
Sbjct: 341 SQGGRAKEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKVIGKS 400

Query: 340 DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMR 399
           DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENF+CMR
Sbjct: 401 DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMR 460

Query: 400 EAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLL 459
           EAGVPPNNVTF+GVLSACVHGGM+KEGRHYF+MMKSVYG+KPQLPHYGCMVDLLGKAGLL
Sbjct: 461 EAGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQLPHYGCMVDLLGKAGLL 520

Query: 460 EEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 519
           EEARRMI+EMPM+ANS+IWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY
Sbjct: 521 EEARRMIDEMPMRANSIIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 580

Query: 520 ASNGLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           ASNGLWKE  KVRE MKQRQLAKVPGYSLAT+LD
Sbjct: 581 ASNGLWKEVHKVREFMKQRQLAKVPGYSLATKLD 614

[Close]

BLAST of Lag0040365 vs. NCBI nr
Match: XP_023541139.1 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 934.1 bits (2413), Expect = 5.5e-268
Identity = 456/514 (88.72%), Postives = 482/514 (93.77%), Query Frame = 0


Query: 40  KGDFFFGDNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQF 99
           +G F +GDNNKSKFTN GSSP+SS QTL MR GHS PIYN++HL TD+FRP +EFNDV+F
Sbjct: 101 EGQFVYGDNNKSKFTNVGSSPDSSLQTLLMRGGHSPPIYNSKHLATDDFRPLVEFNDVRF 160

Query: 100 VDKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCTNLLELYQIHAHVLRT 159
           +DK    KQL ERDA I+ P+  TYTSDNNVDQ SI+ATLLMNCT+LLEL QIHAH+LRT
Sbjct: 161 IDKLKINKQLAERDARIDAPIQSTYTSDNNVDQVSIVATLLMNCTHLLELSQIHAHILRT 220

Query: 160 NMLENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYAL 219
           NMLEN+PSSF WNNIIRSYTR EAPRKALSVYIAMLRAG+ PDSYTLPIVFKALSLVYA 
Sbjct: 221 NMLENYPSSFSWNNIIRSYTRQEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAF 280

Query: 220 GLGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGL 279
           GLGLQLHSVAIRLGLEFDQYSESGLISLYSK GD ECA KVFEQNHHRKLGSWNAIIAGL
Sbjct: 281 GLGLQLHSVAIRLGLEFDQYSESGLISLYSKLGDLECACKVFEQNHHRKLGSWNAIIAGL 340

Query: 280 SQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKS 339
           SQGGRAKEAVDMFIK RRSG EPD+VTIVSVTSACGSLGDL+LSLQMHKFVFQVK TGKS
Sbjct: 341 SQGGRAKEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKATGKS 400

Query: 340 DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMR 399
           DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENF+CMR
Sbjct: 401 DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMR 460

Query: 400 EAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLL 459
           EAGVPPNNVTF+GVLSACVHGGM+KEGRHYF+MMKSVYG+KPQLPHYGCMVDLLGKAGLL
Sbjct: 461 EAGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQLPHYGCMVDLLGKAGLL 520

Query: 460 EEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 519
           EEARRMI+EMPMKANS+IWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY
Sbjct: 521 EEARRMIDEMPMKANSIIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 580

Query: 520 ASNGLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           ASNGLWKE QKVRE MKQRQLAKVPGYSLAT+LD
Sbjct: 581 ASNGLWKEVQKVREFMKQRQLAKVPGYSLATKLD 614

[Close]

BLAST of Lag0040365 vs. NCBI nr
Match: XP_038893424.1 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 923.3 bits (2385), Expect = 9.8e-265
Identity = 451/511 (88.26%), Postives = 474/511 (92.76%), Query Frame = 0


Query: 43  FFFGDNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQFVDK 102
           F  GD NKSKFTN GSSPESSR  L M  GHS+P YNT+ LET+E RP +EFNDVQFVDK
Sbjct: 103 FVIGDENKSKFTNVGSSPESSRNILLMTAGHSYPTYNTKQLETNELRPLVEFNDVQFVDK 162

Query: 103 PNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCTNLLELYQIHAHVLRTNML 162
             + KQL ERDAA E P+WLTYTSDNNVDQA I+A LL NCTNLLELYQIHAHVLRTN+L
Sbjct: 163 LKQNKQLAERDAAAEAPIWLTYTSDNNVDQARIVAILLTNCTNLLELYQIHAHVLRTNIL 222

Query: 163 ENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALGLG 222
           EN+PSSF+WN IIRSYT+LEAPRKALSVYIAMLRAG+LPD YTLPIVFKALSL YA GLG
Sbjct: 223 ENNPSSFFWNTIIRSYTKLEAPRKALSVYIAMLRAGVLPDFYTLPIVFKALSLAYAFGLG 282

Query: 223 LQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLSQG 282
           +QLHS+AIRLGLEF QYSESGLISLYSK GD ECARKVFEQNHHRKLGSWNAIIAGLSQG
Sbjct: 283 IQLHSIAIRLGLEFHQYSESGLISLYSKVGDLECARKVFEQNHHRKLGSWNAIIAGLSQG 342

Query: 283 GRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKSDIL 342
           GRAKEAVDMFIK R+SG EPD+VTIVSVTSACGSLGDL+LSLQMHKFVFQVKV GKSDIL
Sbjct: 343 GRAKEAVDMFIKLRQSGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKVAGKSDIL 402

Query: 343 MLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMREAG 402
           MLNSLIDMYGKCGRMDLA+KVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQ MREAG
Sbjct: 403 MLNSLIDMYGKCGRMDLAMKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAG 462

Query: 403 VPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLLEEA 462
           VPPN+VTFVGVLSACVHGGMI EG+HYFDMMK+VYGFKPQLPHYGCMVDLLGKAGLLEEA
Sbjct: 463 VPPNHVTFVGVLSACVHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLGKAGLLEEA 522

Query: 463 RRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYASN 522
           R+MIEEMPMKANSVIWGCLIG CEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYASN
Sbjct: 523 RKMIEEMPMKANSVIWGCLIGGCEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYASN 582

Query: 523 GLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           GLWKE QKVRE+MKQRQLAKVPGYSL TRLD
Sbjct: 583 GLWKEVQKVREVMKQRQLAKVPGYSLPTRLD 613

[Close]

BLAST of Lag0040365 vs. NCBI nr
Match: XP_022945503.1 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 921.4 bits (2380), Expect = 3.7e-264
Identity = 452/513 (88.11%), Postives = 477/513 (92.98%), Query Frame = 0


Query: 41  GDFFFGDNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQFV 100
           G F +GDNNKSKFTN G    SS QT+ MR GH  PIYNT+HL TD+FRP +EFNDV+F+
Sbjct: 102 GRFVYGDNNKSKFTNVG----SSLQTVLMRGGHFPPIYNTKHLATDDFRPLVEFNDVRFI 161

Query: 101 DKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCTNLLELYQIHAHVLRTN 160
           DK    KQL ERDA I+ P+  TYTSDNNVDQ SI+ATLLMNCT+LLEL QIHAH+LRTN
Sbjct: 162 DKLKINKQLAERDARIDAPIRSTYTSDNNVDQVSIVATLLMNCTHLLELSQIHAHILRTN 221

Query: 161 MLENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALG 220
           MLEN+PSSF WNNIIR YTRLEAPRKALSVYIAMLRAG+ PDSYTLPIVFKALSLVYA G
Sbjct: 222 MLENYPSSFSWNNIIRKYTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAFG 281

Query: 221 LGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLS 280
           LGLQLHSVAIRLGLEFDQYSESGLISLYSK GD ECARKVFEQNHHRKLGSWNAIIAGLS
Sbjct: 282 LGLQLHSVAIRLGLEFDQYSESGLISLYSKLGDLECARKVFEQNHHRKLGSWNAIIAGLS 341

Query: 281 QGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKSD 340
           QGGRAKEAVDMFIK RRSG EPD+VTIVSVTSACGSLGDL+LSLQMHKFVFQVK TGKSD
Sbjct: 342 QGGRAKEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKATGKSD 401

Query: 341 ILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMRE 400
           ILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENF+CMRE
Sbjct: 402 ILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMRE 461

Query: 401 AGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLLE 460
           AGVPPNNVTF+GVLSACVHGGM+KEGRHYF+MMKSVYG+KPQLPHYGCMVDLLGKAGLLE
Sbjct: 462 AGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQLPHYGCMVDLLGKAGLLE 521

Query: 461 EARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYA 520
           EARRMI+EMPMKANS+IWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYA
Sbjct: 522 EARRMIDEMPMKANSIIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYA 581

Query: 521 SNGLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           +NGLWKE QKVRE MKQRQLAKVPGYSLAT+LD
Sbjct: 582 TNGLWKEVQKVREFMKQRQLAKVPGYSLATKLD 610

[Close]

BLAST of Lag0040365 vs. NCBI nr
Match: XP_022150503.1 (pentatricopeptide repeat-containing protein At1g77170-like isoform X1 [Momordica charantia])

HSP 1 Score: 900.6 bits (2326), Expect = 6.8e-258
Identity = 441/511 (86.30%), Postives = 472/511 (92.37%), Query Frame = 0


Query: 46  GDNNKSKFTNGGSSPES-SRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQFVDKPN 105
           GDN+K +FTN GSSPES  +Q+L MRTGHS PIYNT++LET+EFRP +EFN VQFVDKP 
Sbjct: 101 GDNSKKRFTNFGSSPESLLQQSLLMRTGHSPPIYNTKNLETNEFRPLIEFNGVQFVDKPK 160

Query: 106 RIKQLVERDAAIEVPVWLTYTS--DNNVDQASIIATLLMNCTNLLELYQIHAHVLRTNML 165
             KQL ERD AIE   WL +TS  +NN DQA+ + TLL+NCTNLLELYQIHAHVLRTNML
Sbjct: 161 IDKQLAERDVAIESSTWLVHTSYGNNNADQANTVTTLLLNCTNLLELYQIHAHVLRTNML 220

Query: 166 ENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALGLG 225
           ENHPSSFYWNNIIRSYTRLEAP KAL VYIAMLRAGILPD YTLPIVFKALSLVYA GLG
Sbjct: 221 ENHPSSFYWNNIIRSYTRLEAPGKALFVYIAMLRAGILPDYYTLPIVFKALSLVYAFGLG 280

Query: 226 LQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLSQG 285
           LQLHSVA+RLGL+FDQYSESGLI+LYSK GDFECAR VFEQNHHRKLGSWNAIIAGLSQG
Sbjct: 281 LQLHSVALRLGLDFDQYSESGLINLYSKVGDFECARMVFEQNHHRKLGSWNAIIAGLSQG 340

Query: 286 GRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKSDIL 345
           GRAKEAVDMFI+ R+SG EPD+VTIVSVTSACGS+GDL+LSLQMHKFVFQVKV GKSDIL
Sbjct: 341 GRAKEAVDMFIRLRQSGLEPDDVTIVSVTSACGSIGDLELSLQMHKFVFQVKVIGKSDIL 400

Query: 346 MLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMREAG 405
           M NSLIDMYGKCGRMDLA KVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENF+CMREAG
Sbjct: 401 MSNSLIDMYGKCGRMDLAFKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMREAG 460

Query: 406 VPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLLEEA 465
            PPN+VTF+GVLSACVHGGMIKEG+HYFDMMKSVY  KPQLPHYGCMVDLLGKAGLLEEA
Sbjct: 461 APPNHVTFIGVLSACVHGGMIKEGKHYFDMMKSVYAIKPQLPHYGCMVDLLGKAGLLEEA 520

Query: 466 RRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYASN 525
           R ++EEMPMKANSVIWGCLIGACEKHGNV+MGEWAA+HLQELEPWNDGVYVVLSNIYASN
Sbjct: 521 RNIVEEMPMKANSVIWGCLIGACEKHGNVQMGEWAAEHLQELEPWNDGVYVVLSNIYASN 580

Query: 526 GLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           GLWKE QKVR++MKQRQLAKVPGYSL TRLD
Sbjct: 581 GLWKEVQKVRQVMKQRQLAKVPGYSLPTRLD 611

[Close]

BLAST of Lag0040365 vs. ExPASy Swiss-Prot
Match: Q3ECB8 (Pentatricopeptide repeat-containing protein At1g77170, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E21 PE=2 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 3.7e-150
Identity = 245/420 (58.33%), Postives = 325/420 (77.38%), Query Frame = 0


Query: 131 DQASIIATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNNIIRSYTRLEAPRKALSV 190
           D+  ++ATLL NCT+L  + +IH  + R+ +L+ +P +F WNNI+RSY R E+P  A+ V
Sbjct: 45  DRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQV 104

Query: 191 YIAMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSVAIRLGLEFDQYSESGLISLYSK 250
           Y+ M+R+ +LPD Y+LPIV KA   ++   LG +LHSVA+RLG   D++ ESG I+LY K
Sbjct: 105 YLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCK 164

Query: 251 AGDFECARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKFRRSGFEPDNVTIVSV 310
           AG+FE ARKVF++N  RKLGSWNAII GL+  GRA EAV+MF+  +RSG EPD+ T+VSV
Sbjct: 165 AGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSV 224

Query: 311 TSACGSLGDLDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHR 370
           T++CG LGDL L+ Q+HK V Q K   KSDI+MLNSLIDMYGKCGRMDLA  +F  M  R
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR 284

Query: 371 NVSSWTSLIVGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYF 430
           NV SW+S+IVGYA +G   +ALE F+ MRE GV PN +TFVGVLSACVHGG+++EG+ YF
Sbjct: 285 NVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYF 344

Query: 431 DMMKSVYGFKPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGN 490
            MMKS +  +P L HYGC+VDLL + G L+EA++++EEMPMK N ++WGCL+G CEK G+
Sbjct: 345 AMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGD 404

Query: 491 VEMGEWAAKHLQELEPWNDGVYVVLSNIYASNGLWKEAQKVREIMKQRQLAKVPGYSLAT 550
           VEM EW A ++ ELEPWNDGVYVVL+N+YA  G+WK+ ++VR++MK +++AK+P YS A+
Sbjct: 405 VEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSYAS 464

[Close]

BLAST of Lag0040365 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 308.5 bits (789), Expect = 1.5e-82
Identity = 157/389 (40.36%), Postives = 243/389 (62.47%), Query Frame = 0


Query: 162 LENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGIL-PDSYTLPIVFKALSLVYALG 221
           +E   + F WN +IR Y  +     A S+Y  M  +G++ PD++T P + KA++ +  + 
Sbjct: 79  IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138

Query: 222 LGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLS 281
           LG  +HSV IR G     Y ++ L+ LY+  GD   A KVF++   + L +WN++I G +
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198

Query: 282 QGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKSD 341
           + G+ +EA+ ++ +    G +PD  TIVS+ SAC  +G L L  ++H  V+ +KV    +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH--VYMIKVGLTRN 258

Query: 342 ILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMRE 401
           +   N L+D+Y +CGR++ A  +F  M  +N  SWTSLIVG A++G  K+A+E F+ M  
Sbjct: 259 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 318

Query: 402 A-GVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLL 461
             G+ P  +TFVG+L AC H GM+KEG  YF  M+  Y  +P++ H+GCMVDLL +AG +
Sbjct: 319 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 378

Query: 462 EEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 521
           ++A   I+ MPM+ N VIW  L+GAC  HG+ ++ E+A   + +LEP + G YV+LSN+Y
Sbjct: 379 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 438

Query: 522 ASNGLWKEAQKVREIMKQRQLAKVPGYSL 549
           AS   W + QK+R+ M +  + KVPG+SL
Sbjct: 439 ASEQRWSDVQKIRKQMLRDGVKKVPGHSL 465

[Close]

BLAST of Lag0040365 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 305.4 bits (781), Expect = 1.3e-81
Identity = 162/475 (34.11%), Postives = 277/475 (58.32%), Query Frame = 0


Query: 74  SHPIYNTEHLETDEFRPRLEFNDVQFVDKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQA 133
           SH    T+H + D    +   N +  + K N +++L++  A         Y   ++++  
Sbjct: 13  SHAETFTKHSKIDTVNTQ---NPILLISKCNSLRELMQIQA---------YAIKSHIEDV 72

Query: 134 SIIATLLMNCT-NLLELYQIHAHVLRTNMLENHPSSFYWNNIIRSYTRLEAPRKALSVYI 193
           S +A L+  CT +  E    +A  L   M E  P    +N++ R Y+R   P +  S+++
Sbjct: 73  SFVAKLINFCTESPTESSMSYARHLFEAMSE--PDIVIFNSMARGYSRFTNPLEVFSLFV 132

Query: 194 AMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSVAIRLGLEFDQYSESGLISLYSKAG 253
            +L  GILPD+YT P + KA ++  AL  G QLH ++++LGL+ + Y    LI++Y++  
Sbjct: 133 EILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE 192

Query: 254 DFECARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTS 313
           D + AR VF++     +  +NA+I G ++  R  EA+ +F + +    +P+ +T++SV S
Sbjct: 193 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLS 252

Query: 314 ACGSLGDLDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHRNV 373
           +C  LG LDL   +HK+    K +    + +  +LIDM+ KCG +D A+ +F  M +++ 
Sbjct: 253 SCALLGSLDLGKWIHKYA--KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT 312

Query: 374 SSWTSLIVGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDM 433
            +W+++IV YA HG+ ++++  F+ MR   V P+ +TF+G+L+AC H G ++EGR YF  
Sbjct: 313 QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQ 372

Query: 434 MKSVYGFKPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGNVE 493
           M S +G  P + HYG MVDLL +AG LE+A   I+++P+    ++W  L+ AC  H N++
Sbjct: 373 MVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLD 432

Query: 494 MGEWAAKHLQELEPWNDGVYVVLSNIYASNGLWKEAQKVREIMKQRQLAKVPGYS 548
           + E  ++ + EL+  + G YV+LSN+YA N  W+    +R++MK R+  KVPG S
Sbjct: 433 LAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471

[Close]

BLAST of Lag0040365 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.8e-81
Identity = 163/470 (34.68%), Postives = 262/470 (55.74%), Query Frame = 0


Query: 140 LMNCTNLLELYQIHAHVLRTNMLE-------------------------------NHPSS 199
           L  C+   EL QIHA +L+T +++                               + P +
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 200 FYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSV 259
           F WN +IR ++  + P ++L +Y  ML +    ++YT P + KA S + A     Q+H+ 
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 260 AIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLSQGGRA--- 319
             +LG E D Y+ + LI+ Y+  G+F+ A  +F++       SWN++I G  + G+    
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200

Query: 320 ----------------------------KEAVDMFIKFRRSGFEPDNVTIVSVTSACGSL 379
                                       KEA+ +F + + S  EPDNV++ +  SAC  L
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260

Query: 380 GDLDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTS 439
           G L+    +H ++ + ++  + D ++   LIDMY KCG M+ AL+VF N+  ++V +WT+
Sbjct: 261 GALEQGKWIHSYLNKTRI--RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 320

Query: 440 LIVGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVY 499
           LI GYA HG  ++A+  F  M++ G+ PN +TF  VL+AC + G+++EG+  F  M+  Y
Sbjct: 321 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 380

Query: 500 GFKPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWA 548
             KP + HYGC+VDLLG+AGLL+EA+R I+EMP+K N+VIWG L+ AC  H N+E+GE  
Sbjct: 381 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 440

[Close]

BLAST of Lag0040365 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.3e-80
Identity = 151/408 (37.01%), Postives = 235/408 (57.60%), Query Frame = 0


Query: 171 WNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSVAI 230
           WN +I  Y ++    KA+ VY  M   G+ PD  T+  +  + S++  L  G + +    
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284

Query: 231 RLGLE---------FDQYSESG----------------------LISLYSKAGDFECARK 290
             GL           D +S+ G                      +IS Y++ G  + +RK
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344

Query: 291 VFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGD 350
           +F+    + +  WNA+I G  Q  R ++A+ +F + + S  +PD +T++   SAC  LG 
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404

Query: 351 LDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLI 410
           LD+ + +H+++   K +   ++ +  SL+DMY KCG +  AL VF  +  RN  ++T++I
Sbjct: 405 LDVGIWIHRYI--EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 464

Query: 411 VGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGF 470
            G A+HG    A+  F  M +AG+ P+ +TF+G+LSAC HGGMI+ GR YF  MKS +  
Sbjct: 465 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 524

Query: 471 KPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAK 530
            PQL HY  MVDLLG+AGLLEEA R++E MPM+A++ +WG L+  C  HGNVE+GE AAK
Sbjct: 525 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 584

Query: 531 HLQELEPWNDGVYVVLSNIYASNGLWKEAQKVREIMKQRQLAKVPGYS 548
            L EL+P + G+YV+L  +Y    +W++A++ R +M +R + K+PG S
Sbjct: 585 KLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630

[Close]

BLAST of Lag0040365 vs. ExPASy TrEMBL
Match: A0A6J1HYV7 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467485 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 5.4e-269
Identity = 455/514 (88.52%), Postives = 483/514 (93.97%), Query Frame = 0


Query: 40  KGDFFFGDNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQF 99
           +G F +GDNNKSKFTN GSS +SS QTL MR GHS PIYNT+HL TD+FRP +EFNDV+F
Sbjct: 101 EGRFAYGDNNKSKFTNAGSSSDSSLQTLLMRGGHSPPIYNTKHLATDDFRPLVEFNDVRF 160

Query: 100 VDKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCTNLLELYQIHAHVLRT 159
           +DK    KQL ERDA I+ P+W TYTSDNNVDQ SI+ATL+MNCT+LLEL QIHAH+LRT
Sbjct: 161 IDKLKINKQLAERDARIDTPIWSTYTSDNNVDQVSIVATLVMNCTHLLELSQIHAHILRT 220

Query: 160 NMLENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYAL 219
           NMLEN+PSSF WNNIIRSYTRLEAPRKALSVYIAMLRAG+ PDSYTLPIVFKALSLVYA 
Sbjct: 221 NMLENYPSSFSWNNIIRSYTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAF 280

Query: 220 GLGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGL 279
           GLGLQLHSVAIRLGLEFDQYSESGLISLYSK GD ECARKVFE+NHHRKLGSWNAIIAGL
Sbjct: 281 GLGLQLHSVAIRLGLEFDQYSESGLISLYSKLGDLECARKVFEKNHHRKLGSWNAIIAGL 340

Query: 280 SQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKS 339
           SQGGRAKEAVDMFIK RRSG EPD+VTIVSVTSACGSLGDL+LSLQMHKFVFQVKV GKS
Sbjct: 341 SQGGRAKEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKVIGKS 400

Query: 340 DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMR 399
           DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENF+CMR
Sbjct: 401 DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMR 460

Query: 400 EAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLL 459
           EAGVPPNNVTF+GVLSACVHGGM+KEGRHYF+MMKSVYG+KPQLPHYGCMVDLLGKAGLL
Sbjct: 461 EAGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQLPHYGCMVDLLGKAGLL 520

Query: 460 EEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 519
           EEARRMI+EMPM+ANS+IWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY
Sbjct: 521 EEARRMIDEMPMRANSIIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 580

Query: 520 ASNGLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           ASNGLWKE  KVRE MKQRQLAKVPGYSLAT+LD
Sbjct: 581 ASNGLWKEVHKVREFMKQRQLAKVPGYSLATKLD 614

[Close]

BLAST of Lag0040365 vs. ExPASy TrEMBL
Match: A0A6J1G132 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449720 PE=4 SV=1)

HSP 1 Score: 921.4 bits (2380), Expect = 1.8e-264
Identity = 452/513 (88.11%), Postives = 477/513 (92.98%), Query Frame = 0


Query: 41  GDFFFGDNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQFV 100
           G F +GDNNKSKFTN G    SS QT+ MR GH  PIYNT+HL TD+FRP +EFNDV+F+
Sbjct: 102 GRFVYGDNNKSKFTNVG----SSLQTVLMRGGHFPPIYNTKHLATDDFRPLVEFNDVRFI 161

Query: 101 DKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCTNLLELYQIHAHVLRTN 160
           DK    KQL ERDA I+ P+  TYTSDNNVDQ SI+ATLLMNCT+LLEL QIHAH+LRTN
Sbjct: 162 DKLKINKQLAERDARIDAPIRSTYTSDNNVDQVSIVATLLMNCTHLLELSQIHAHILRTN 221

Query: 161 MLENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALG 220
           MLEN+PSSF WNNIIR YTRLEAPRKALSVYIAMLRAG+ PDSYTLPIVFKALSLVYA G
Sbjct: 222 MLENYPSSFSWNNIIRKYTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAFG 281

Query: 221 LGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLS 280
           LGLQLHSVAIRLGLEFDQYSESGLISLYSK GD ECARKVFEQNHHRKLGSWNAIIAGLS
Sbjct: 282 LGLQLHSVAIRLGLEFDQYSESGLISLYSKLGDLECARKVFEQNHHRKLGSWNAIIAGLS 341

Query: 281 QGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKSD 340
           QGGRAKEAVDMFIK RRSG EPD+VTIVSVTSACGSLGDL+LSLQMHKFVFQVK TGKSD
Sbjct: 342 QGGRAKEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKATGKSD 401

Query: 341 ILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMRE 400
           ILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENF+CMRE
Sbjct: 402 ILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMRE 461

Query: 401 AGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLLE 460
           AGVPPNNVTF+GVLSACVHGGM+KEGRHYF+MMKSVYG+KPQLPHYGCMVDLLGKAGLLE
Sbjct: 462 AGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQLPHYGCMVDLLGKAGLLE 521

Query: 461 EARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYA 520
           EARRMI+EMPMKANS+IWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYA
Sbjct: 522 EARRMIDEMPMKANSIIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYA 581

Query: 521 SNGLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           +NGLWKE QKVRE MKQRQLAKVPGYSLAT+LD
Sbjct: 582 TNGLWKEVQKVREFMKQRQLAKVPGYSLATKLD 610

[Close]

BLAST of Lag0040365 vs. ExPASy TrEMBL
Match: A0A6J1D9M3 (pentatricopeptide repeat-containing protein At1g77170-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018641 PE=4 SV=1)

HSP 1 Score: 900.6 bits (2326), Expect = 3.3e-258
Identity = 441/511 (86.30%), Postives = 472/511 (92.37%), Query Frame = 0


Query: 46  GDNNKSKFTNGGSSPES-SRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQFVDKPN 105
           GDN+K +FTN GSSPES  +Q+L MRTGHS PIYNT++LET+EFRP +EFN VQFVDKP 
Sbjct: 101 GDNSKKRFTNFGSSPESLLQQSLLMRTGHSPPIYNTKNLETNEFRPLIEFNGVQFVDKPK 160

Query: 106 RIKQLVERDAAIEVPVWLTYTS--DNNVDQASIIATLLMNCTNLLELYQIHAHVLRTNML 165
             KQL ERD AIE   WL +TS  +NN DQA+ + TLL+NCTNLLELYQIHAHVLRTNML
Sbjct: 161 IDKQLAERDVAIESSTWLVHTSYGNNNADQANTVTTLLLNCTNLLELYQIHAHVLRTNML 220

Query: 166 ENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALGLG 225
           ENHPSSFYWNNIIRSYTRLEAP KAL VYIAMLRAGILPD YTLPIVFKALSLVYA GLG
Sbjct: 221 ENHPSSFYWNNIIRSYTRLEAPGKALFVYIAMLRAGILPDYYTLPIVFKALSLVYAFGLG 280

Query: 226 LQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLSQG 285
           LQLHSVA+RLGL+FDQYSESGLI+LYSK GDFECAR VFEQNHHRKLGSWNAIIAGLSQG
Sbjct: 281 LQLHSVALRLGLDFDQYSESGLINLYSKVGDFECARMVFEQNHHRKLGSWNAIIAGLSQG 340

Query: 286 GRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKSDIL 345
           GRAKEAVDMFI+ R+SG EPD+VTIVSVTSACGS+GDL+LSLQMHKFVFQVKV GKSDIL
Sbjct: 341 GRAKEAVDMFIRLRQSGLEPDDVTIVSVTSACGSIGDLELSLQMHKFVFQVKVIGKSDIL 400

Query: 346 MLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMREAG 405
           M NSLIDMYGKCGRMDLA KVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENF+CMREAG
Sbjct: 401 MSNSLIDMYGKCGRMDLAFKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMREAG 460

Query: 406 VPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLLEEA 465
            PPN+VTF+GVLSACVHGGMIKEG+HYFDMMKSVY  KPQLPHYGCMVDLLGKAGLLEEA
Sbjct: 461 APPNHVTFIGVLSACVHGGMIKEGKHYFDMMKSVYAIKPQLPHYGCMVDLLGKAGLLEEA 520

Query: 466 RRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIYASN 525
           R ++EEMPMKANSVIWGCLIGACEKHGNV+MGEWAA+HLQELEPWNDGVYVVLSNIYASN
Sbjct: 521 RNIVEEMPMKANSVIWGCLIGACEKHGNVQMGEWAAEHLQELEPWNDGVYVVLSNIYASN 580

Query: 526 GLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           GLWKE QKVR++MKQRQLAKVPGYSL TRLD
Sbjct: 581 GLWKEVQKVRQVMKQRQLAKVPGYSLPTRLD 611

[Close]

BLAST of Lag0040365 vs. ExPASy TrEMBL
Match: A0A0A0KRB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612280 PE=4 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 1.0e-251
Identity = 435/529 (82.23%), Postives = 468/529 (88.47%), Query Frame = 0


Query: 27  CFLFKMWHQVTNAKGDFFFG--DNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLE 86
           C +  +   V++ K +  FG  D  KSKFTN GSSPESSR T     GH +P Y T+HLE
Sbjct: 127 CLVLPVQDVVSDYKCEERFGICDEKKSKFTNVGSSPESSRHTFLTTAGHCYPNYKTKHLE 186

Query: 87  TDEFRPRLEFNDVQFVDKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCT 146
           T+E R  +EFND+QFVD+P + KQ  ER+A  E P WLTYTS NN+D A I+ATLLMNCT
Sbjct: 187 TNELRRLVEFNDLQFVDEPKQNKQPAERNAVTETPFWLTYTSYNNMDHARIVATLLMNCT 246

Query: 147 NLLELYQIHAHVLRTNMLENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSY 206
           N+LELYQIHAHVLRTNMLENHPSSFYWN IIRSYTRLE PR AL VYI MLRAGILPD Y
Sbjct: 247 NVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFVYIDMLRAGILPDCY 306

Query: 207 TLPIVFKALSLVYALGLGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQN 266
           TLPIVFKALSL YA  LGLQLHSVAIRLG EFDQYSESGLISLYSK GD ECA KVFEQN
Sbjct: 307 TLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYSKIGDLECACKVFEQN 366

Query: 267 HHRKLGSWNAIIAGLSQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSL 326
           H+RKLGSWNAIIAGLSQGGRAKEAV+MFIK R+SG EPD+ TIVSVTSACGSLG+L+LSL
Sbjct: 367 HNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSVTSACGSLGNLELSL 426

Query: 327 QMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAM 386
           QMHKFVFQVKVTGKS+ILMLNSLIDMYGKCGRMDLA+KVFSNM HRNVSSWTSLIVGYAM
Sbjct: 427 QMHKFVFQVKVTGKSNILMLNSLIDMYGKCGRMDLAMKVFSNMGHRNVSSWTSLIVGYAM 486

Query: 387 HGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLP 446
           HGQVKQALENFQ MREAGVPPN VTFVGVLSACVHGGMI EG+HYFDMMK+VYGFKPQLP
Sbjct: 487 HGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHYFDMMKNVYGFKPQLP 546

Query: 447 HYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQEL 506
           HYGCMVDLL KAGLLEEARRMIEEMPMKANS+IWGCLIG CEKHGNVE+GEWA KHLQEL
Sbjct: 547 HYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQEL 606

Query: 507 EPWNDGVYVVLSNIYASNGLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           EPWNDGVYVVLSNIYA+NG+WKEAQK+R++MKQRQLAKVPGYSLATRLD
Sbjct: 607 EPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYSLATRLD 655

[Close]

BLAST of Lag0040365 vs. ExPASy TrEMBL
Match: A0A6J1HWH4 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467485 PE=4 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 2.8e-249
Identity = 429/514 (83.46%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 40  KGDFFFGDNNKSKFTNGGSSPESSRQTLPMRTGHSHPIYNTEHLETDEFRPRLEFNDVQF 99
           +G F +GDNNKSKFTN GSS +SS QTL MR GHS PIYNT+HL TD+FRP +EFNDV+F
Sbjct: 101 EGRFAYGDNNKSKFTNAGSSSDSSLQTLLMRGGHSPPIYNTKHLATDDFRPLVEFNDVRF 160

Query: 100 VDKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQASIIATLLMNCTNLLELYQIHAHVLRT 159
           +DK    KQL ERDA I+ P+W TYTSDNNVDQ SI+ATL+MNCT+LLEL QIHAH+LRT
Sbjct: 161 IDKLKINKQLAERDARIDTPIWSTYTSDNNVDQVSIVATLVMNCTHLLELSQIHAHILRT 220

Query: 160 NMLENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYAL 219
           NMLEN+PSSF WNNIIRSYTRLEAPRKALSVYIAMLRAG+ PDSYTLPIVFKALSLVYA 
Sbjct: 221 NMLENYPSSFSWNNIIRSYTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAF 280

Query: 220 GLGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGL 279
           GLGLQLHSVAIRLGLEFDQYSESGLISLYSK GD ECARKVFE+NHHRKLGSWNAIIAGL
Sbjct: 281 GLGLQLHSVAIRLGLEFDQYSESGLISLYSKLGDLECARKVFEKNHHRKLGSWNAIIAGL 340

Query: 280 SQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKS 339
           SQGGRAKEAVDMFIK RRSG EPD+VTIVSVTSACGSLGDL+LSLQMHKFVFQVKV GKS
Sbjct: 341 SQGGRAKEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKVIGKS 400

Query: 340 DILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMR 399
           DILMLNSLIDMYGKC                          GYAMHGQVKQALENF+CMR
Sbjct: 401 DILMLNSLIDMYGKC--------------------------GYAMHGQVKQALENFRCMR 460

Query: 400 EAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLL 459
           EAGVPPNNVTF+GVLSACVHGGM+KEGRHYF+MMKSVYG+KPQLPHYGCMVDLLGKAGLL
Sbjct: 461 EAGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQLPHYGCMVDLLGKAGLL 520

Query: 460 EEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 519
           EEARRMI+EMPM+ANS+IWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY
Sbjct: 521 EEARRMIDEMPMRANSIIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 580

Query: 520 ASNGLWKEAQKVREIMKQRQLAKVPGYSLATRLD 554
           ASNGLWKE  KVRE MKQRQLAKVPGYSLAT+LD
Sbjct: 581 ASNGLWKEVHKVREFMKQRQLAKVPGYSLATKLD 588

[Close]

BLAST of Lag0040365 vs. TAIR 10
Match: AT1G77170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 533.1 bits (1372), Expect = 2.7e-151
Identity = 245/420 (58.33%), Postives = 325/420 (77.38%), Query Frame = 0


Query: 131 DQASIIATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNNIIRSYTRLEAPRKALSV 190
           D+  ++ATLL NCT+L  + +IH  + R+ +L+ +P +F WNNI+RSY R E+P  A+ V
Sbjct: 45  DRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQV 104

Query: 191 YIAMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSVAIRLGLEFDQYSESGLISLYSK 250
           Y+ M+R+ +LPD Y+LPIV KA   ++   LG +LHSVA+RLG   D++ ESG I+LY K
Sbjct: 105 YLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCK 164

Query: 251 AGDFECARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKFRRSGFEPDNVTIVSV 310
           AG+FE ARKVF++N  RKLGSWNAII GL+  GRA EAV+MF+  +RSG EPD+ T+VSV
Sbjct: 165 AGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSV 224

Query: 311 TSACGSLGDLDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHR 370
           T++CG LGDL L+ Q+HK V Q K   KSDI+MLNSLIDMYGKCGRMDLA  +F  M  R
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR 284

Query: 371 NVSSWTSLIVGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYF 430
           NV SW+S+IVGYA +G   +ALE F+ MRE GV PN +TFVGVLSACVHGG+++EG+ YF
Sbjct: 285 NVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYF 344

Query: 431 DMMKSVYGFKPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGN 490
            MMKS +  +P L HYGC+VDLL + G L+EA++++EEMPMK N ++WGCL+G CEK G+
Sbjct: 345 AMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGD 404

Query: 491 VEMGEWAAKHLQELEPWNDGVYVVLSNIYASNGLWKEAQKVREIMKQRQLAKVPGYSLAT 550
           VEM EW A ++ ELEPWNDGVYVVL+N+YA  G+WK+ ++VR++MK +++AK+P YS A+
Sbjct: 405 VEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSYAS 464

[Close]

BLAST of Lag0040365 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 308.5 bits (789), Expect = 1.1e-83
Identity = 157/389 (40.36%), Postives = 243/389 (62.47%), Query Frame = 0


Query: 162 LENHPSSFYWNNIIRSYTRLEAPRKALSVYIAMLRAGIL-PDSYTLPIVFKALSLVYALG 221
           +E   + F WN +IR Y  +     A S+Y  M  +G++ PD++T P + KA++ +  + 
Sbjct: 79  IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138

Query: 222 LGLQLHSVAIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLS 281
           LG  +HSV IR G     Y ++ L+ LY+  GD   A KVF++   + L +WN++I G +
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198

Query: 282 QGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGDLDLSLQMHKFVFQVKVTGKSD 341
           + G+ +EA+ ++ +    G +PD  TIVS+ SAC  +G L L  ++H  V+ +KV    +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH--VYMIKVGLTRN 258

Query: 342 ILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQCMRE 401
           +   N L+D+Y +CGR++ A  +F  M  +N  SWTSLIVG A++G  K+A+E F+ M  
Sbjct: 259 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 318

Query: 402 A-GVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGFKPQLPHYGCMVDLLGKAGLL 461
             G+ P  +TFVG+L AC H GM+KEG  YF  M+  Y  +P++ H+GCMVDLL +AG +
Sbjct: 319 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 378

Query: 462 EEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAKHLQELEPWNDGVYVVLSNIY 521
           ++A   I+ MPM+ N VIW  L+GAC  HG+ ++ E+A   + +LEP + G YV+LSN+Y
Sbjct: 379 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 438

Query: 522 ASNGLWKEAQKVREIMKQRQLAKVPGYSL 549
           AS   W + QK+R+ M +  + KVPG+SL
Sbjct: 439 ASEQRWSDVQKIRKQMLRDGVKKVPGHSL 465

[Close]

BLAST of Lag0040365 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 305.4 bits (781), Expect = 9.0e-83
Identity = 162/475 (34.11%), Postives = 277/475 (58.32%), Query Frame = 0


Query: 74  SHPIYNTEHLETDEFRPRLEFNDVQFVDKPNRIKQLVERDAAIEVPVWLTYTSDNNVDQA 133
           SH    T+H + D    +   N +  + K N +++L++  A         Y   ++++  
Sbjct: 13  SHAETFTKHSKIDTVNTQ---NPILLISKCNSLRELMQIQA---------YAIKSHIEDV 72

Query: 134 SIIATLLMNCT-NLLELYQIHAHVLRTNMLENHPSSFYWNNIIRSYTRLEAPRKALSVYI 193
           S +A L+  CT +  E    +A  L   M E  P    +N++ R Y+R   P +  S+++
Sbjct: 73  SFVAKLINFCTESPTESSMSYARHLFEAMSE--PDIVIFNSMARGYSRFTNPLEVFSLFV 132

Query: 194 AMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSVAIRLGLEFDQYSESGLISLYSKAG 253
            +L  GILPD+YT P + KA ++  AL  G QLH ++++LGL+ + Y    LI++Y++  
Sbjct: 133 EILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE 192

Query: 254 DFECARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTS 313
           D + AR VF++     +  +NA+I G ++  R  EA+ +F + +    +P+ +T++SV S
Sbjct: 193 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLS 252

Query: 314 ACGSLGDLDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHRNV 373
           +C  LG LDL   +HK+    K +    + +  +LIDM+ KCG +D A+ +F  M +++ 
Sbjct: 253 SCALLGSLDLGKWIHKYA--KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT 312

Query: 374 SSWTSLIVGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDM 433
            +W+++IV YA HG+ ++++  F+ MR   V P+ +TF+G+L+AC H G ++EGR YF  
Sbjct: 313 QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQ 372

Query: 434 MKSVYGFKPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGNVE 493
           M S +G  P + HYG MVDLL +AG LE+A   I+++P+    ++W  L+ AC  H N++
Sbjct: 373 MVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLD 432

Query: 494 MGEWAAKHLQELEPWNDGVYVVLSNIYASNGLWKEAQKVREIMKQRQLAKVPGYS 548
           + E  ++ + EL+  + G YV+LSN+YA N  W+    +R++MK R+  KVPG S
Sbjct: 433 LAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471

[Close]

BLAST of Lag0040365 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 303.5 bits (776), Expect = 3.4e-82
Identity = 163/470 (34.68%), Postives = 262/470 (55.74%), Query Frame = 0


Query: 140 LMNCTNLLELYQIHAHVLRTNMLE-------------------------------NHPSS 199
           L  C+   EL QIHA +L+T +++                               + P +
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 200 FYWNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSV 259
           F WN +IR ++  + P ++L +Y  ML +    ++YT P + KA S + A     Q+H+ 
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 260 AIRLGLEFDQYSESGLISLYSKAGDFECARKVFEQNHHRKLGSWNAIIAGLSQGGRA--- 319
             +LG E D Y+ + LI+ Y+  G+F+ A  +F++       SWN++I G  + G+    
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200

Query: 320 ----------------------------KEAVDMFIKFRRSGFEPDNVTIVSVTSACGSL 379
                                       KEA+ +F + + S  EPDNV++ +  SAC  L
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260

Query: 380 GDLDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTS 439
           G L+    +H ++ + ++  + D ++   LIDMY KCG M+ AL+VF N+  ++V +WT+
Sbjct: 261 GALEQGKWIHSYLNKTRI--RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 320

Query: 440 LIVGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVY 499
           LI GYA HG  ++A+  F  M++ G+ PN +TF  VL+AC + G+++EG+  F  M+  Y
Sbjct: 321 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 380

Query: 500 GFKPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWA 548
             KP + HYGC+VDLLG+AGLL+EA+R I+EMP+K N+VIWG L+ AC  H N+E+GE  
Sbjct: 381 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 440

[Close]

BLAST of Lag0040365 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 300.1 bits (767), Expect = 3.8e-81
Identity = 151/408 (37.01%), Postives = 235/408 (57.60%), Query Frame = 0


Query: 171 WNNIIRSYTRLEAPRKALSVYIAMLRAGILPDSYTLPIVFKALSLVYALGLGLQLHSVAI 230
           WN +I  Y ++    KA+ VY  M   G+ PD  T+  +  + S++  L  G + +    
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284

Query: 231 RLGLE---------FDQYSESG----------------------LISLYSKAGDFECARK 290
             GL           D +S+ G                      +IS Y++ G  + +RK
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344

Query: 291 VFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKFRRSGFEPDNVTIVSVTSACGSLGD 350
           +F+    + +  WNA+I G  Q  R ++A+ +F + + S  +PD +T++   SAC  LG 
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404

Query: 351 LDLSLQMHKFVFQVKVTGKSDILMLNSLIDMYGKCGRMDLALKVFSNMDHRNVSSWTSLI 410
           LD+ + +H+++   K +   ++ +  SL+DMY KCG +  AL VF  +  RN  ++T++I
Sbjct: 405 LDVGIWIHRYI--EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 464

Query: 411 VGYAMHGQVKQALENFQCMREAGVPPNNVTFVGVLSACVHGGMIKEGRHYFDMMKSVYGF 470
            G A+HG    A+  F  M +AG+ P+ +TF+G+LSAC HGGMI+ GR YF  MKS +  
Sbjct: 465 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 524

Query: 471 KPQLPHYGCMVDLLGKAGLLEEARRMIEEMPMKANSVIWGCLIGACEKHGNVEMGEWAAK 530
            PQL HY  MVDLLG+AGLLEEA R++E MPM+A++ +WG L+  C  HGNVE+GE AAK
Sbjct: 525 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 584

Query: 531 HLQELEPWNDGVYVVLSNIYASNGLWKEAQKVREIMKQRQLAKVPGYS 548
            L EL+P + G+YV+L  +Y    +W++A++ R +M +R + K+PG S
Sbjct: 585 KLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630

The following BLAST results are available for this feature:

BLAST of Lag0040365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968169.1	1.1e-268	88.52	pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X1 ...	[more]
XP_023541139.1	5.5e-268	88.72	pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X1 ...	[more]
XP_038893424.1	9.8e-265	88.26	pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like [Benin...	[more]
XP_022945503.1	3.7e-264	88.11	pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like isofor...	[more]
XP_022150503.1	6.8e-258	86.30	pentatricopeptide repeat-containing protein At1g77170-like isoform X1 [Momordica...	[more]

BLAST of Lag0040365 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ECB8	3.7e-150	58.33	Pentatricopeptide repeat-containing protein At1g77170, mitochondrial OS=Arabidop...	[more]
A8MQA3	1.5e-82	40.36	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q8LK93	1.3e-81	34.11	Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop...	[more]
Q9FJY7	4.8e-81	34.68	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	5.3e-80	37.01	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]

BLAST of Lag0040365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYV7	5.4e-269	88.52	pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X1 ...	[more]
A0A6J1G132	1.8e-264	88.11	pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like isofor...	[more]
A0A6J1D9M3	3.3e-258	86.30	pentatricopeptide repeat-containing protein At1g77170-like isoform X1 OS=Momordi...	[more]
A0A0A0KRB8	1.0e-251	82.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612280 PE=4 SV=1	[more]
A0A6J1HWH4	2.8e-249	83.46	pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X2 ...	[more]

BLAST of Lag0040365 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77170.1	2.7e-151	58.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21065.1	1.1e-83	40.36	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G02980.1	9.0e-83	34.11	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	3.4e-82	34.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G22410.1	3.8e-81	37.01	SLOW GROWTH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 216..339 e-value: 3.1E-17 score: 65.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 122..215 e-value: 1.6E-6 score: 29.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 341..550 e-value: 2.1E-45 score: 157.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 446..469 e-value: 0.0011 score: 17.0 coord: 408..441 e-value: 0.0011 score: 16.9 coord: 345..372 e-value: 6.1E-5 score: 20.9 coord: 374..406 e-value: 0.0018 score: 16.3 coord: 271..303 e-value: 7.2E-6 score: 23.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 370..418 e-value: 9.7E-10 score: 38.5 coord: 166..213 e-value: 4.5E-8 score: 33.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 244..262 e-value: 0.16 score: 12.3 coord: 512..538 e-value: 0.12 score: 12.7 coord: 446..470 e-value: 9.0E-4 score: 19.3 coord: 476..495 e-value: 1.3 score: 9.4 coord: 271..300 e-value: 9.8E-5 score: 22.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 167..201 score: 9.63504
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 340..370 score: 9.393891
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 268..302 score: 10.610596
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 371..405 score: 11.443655
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..76
None	No IPR available	PANTHER	PTHR47928:SF35	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	coord: 125..549
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 125..549

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040365.1	Lag0040365.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080156	mitochondrial mRNA modification
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding