Lag0040341 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040341
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Sec-independent protein translocase protein TATC
Location	chr13: 4001776 .. 4005099 (+)
RNA-Seq Expression	Lag0040341
Synteny	Lag0040341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAACGTTGTGAGTCTTCTCTGGCTCGGGGAAAAAGACGAAGAGCCTAATGCGAGAGGAAGTGGAAGAGGAGAGGCGGAGGTGCTCGCAGAGCATGAACTGAAGGTCGTCATCGGAGGAGAGGGAGATGAGAGAGTCGAGGGCGGAGTGAGAAAGAAGAATAAGGGAAGAAGAAAGAAGAAAAAAAAAAAAAAAAAAAAATTCCGGCGACCGCCGCCGCCGCCGCCGTTCGCCGGCAGCCGGCGGCGGTCGGCCACCGGAGCTGAAGAAGATGGGAGGGGGAAGGAAGAAGATGGAGGGAGAAAGAAGGTGGAGAAGAAAGAAGATGGGGAAAAGAGAGAGAATTTTAAAAATAATAATATATTTAATATTTTTATATTTTTTATTTAAAAAAATTAAAAATTAATTTTTTTAATTAAAATAATAGTGCCACGTCAGCTTATCGTTAGGGTTTAACAGAAAAATTGACGGCAGGGACCAAATTGCTCCTTATCTCAAACCTCGGGGGTATTTTTGTTGAGTTTGAAAACTCGGGGACCAAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCAAAAAAAAAAGAAGATGCACACACAACCAGGGACATGGGCAATTCAGGAATATAAAAAATTAATTCAAAAATTTTAAAATTACTATATTTGCCATTATTTATCCTCATGTTGCCACCCATTATATTATCCCAAAATATTGTTGCAATTGCAATGCAACGTGGGCTTGGTACAATTTATGGGCCAAAACCAAAATTGAGAATCGGTTCCGAGCGGACGGCGTATTCTAGATTTGATACATAATTCTCTGATAAGTTACGCCTCTGGCCGTGGAAGCTCTTTAACTACCCCAAAATATCATCATCCTCAAGTGAGGTCCAATAAATTGATGTTACAGAGTCCTGATTTTTGGGCATAAGGCTGAAAGCCGCCATTGATTTTGATTCAGAAAGCCAAAGAAGAGATGGCAAGCATCAGCGGTGCTCTGACATCGCATTTGCAGCTCAATCACTGCCGTTTCTCCGCTAGAACTTCCAAGCTTGCTTCAGCTCGAATCAGCCCACCGTCGAGAAGGTCGAAGTTGCGGTTCACCGGTTTGCCCAGCCGTAGAAATTTCAATAGATTTGTGTGTTCTGCCGTGGATGACGACGTGAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCGACCATCGTCGAGGATGGGCCAGGTATTGGTAATTACCAAAACCTATATTTGATTCTGAAAATCGTGCTTGGTTTATTAGCTTGCGAGCCCGAACAATTTTAGAAGCTGGGTGTGGCATAGTTTAATCATAGAAATTACTTAGCTCGGCTTATTTGAGTTCAGGATTTGAAGGGGGAAAGTCATAAGTGGATTTATTGAGATCCATTAACCAGTTGAGGCGATACGTGTGTTACTTCCAAAGTTCTGGTTAAAATTTATTGGTACTCTAGATGATTTCAGACACCTCACTTGTATTTAAATGTTCATTGCATGTCTTGATTTTAAATTGTGTGGCTGCAGAAAGTTGATGTTATAATTGGTATACAAGTTTCTAATACCCCATTTTTTCATGAAAATGTATTAGATATCGCCGATAACTCAACAAATGGGGCTCCGGAAAGAAGTGATATATATAACTTTCTCTATCCCGATAAAGATCTACTTCCAGATGATAAAGAAATGAGTGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGGGCTGCAATTGTTGGATGCTTTGCATTTTCAAAAGAACTCATCTTAATTCTTGAAGCTCCTGTCAAAGCACAAGGTGTAAGGTTCCTGCAGCTTGCTCCTGGGGAGTTTTTCTTTACAACGTTGAAGGTCAGAACTTTGCTCGATGAAATATTATTATATTCTTAGTATAATCACTTTTTGTTGGACTTGTGAGCATGGTTGCCATCAATCTGGATAGCTATTGATACAAAAATTCTTGAAAATTGAGAAGATCAAATTTGAGTTTAACCAACTCGACCTTTAACTTGGGTGGATCACTTGGATCAATGGGTTGAATTTCATTAAATGATTAGATTGTATCAGAGTCTAATAACTTCAACTTTCTGGTTTCATGGTGATTTAAGACGAAATTAGAGTAAGAGGTCCTAGGTTGAAATCTTTGCAACATTATCTCTTTCCTTATTTATCCAACCACTATTAAATACAACAAGAATCTACTTGGATATTGAGAACGTGGAAAAATACATTTATTTGCCGGTATCTCGACGTTGAATTAGAACTTTTTGTTTATTCTATCAATCTTTTTGGTGTGCGTGTATGTGTATTGCTTAATACCAAACCACTAGATCATATATGACTCATGTCCCTCTCTAAGTCAATGGGTGATACCACGACTTTGAACTATGCACGTTGGCAAATATTTCATAATAAAATACTGTTTCTAATTTAAGTTTAATTTCAAAATTCACTCTCCACTTCCTCCACAATATATGCAGTTGTATATTTACGCATGTAGTTGCCGGGGGTCAATAGCAATAAAATTCTCCTTATACGCTGCAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTTTATGAGATTATTGCCTTCGTTCTTCCAGGATTAACAAGAGCAGAAAGACGGTTTCTTGCGCCTATCGTCCTAGGCTCCTCTATACTTTTTTACGCAGGAATTGCCTTCTCCTACGTAGTCTTGACCCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGCTTTTTTGTTTCATAATTGAATTGAATTGGTAGTGTTCCATACTCTAGAACATTGATTCCTACCAATTCCTTCTCGGGAACAATCTATCATTTTTAAACCTCCAGAAATTGACTCTTCTGACGGAATCTTAATTCAATTTTAGTGTCATGCATGAAACCAAATTTCACTCAGTGGAGCTAACATTTTGACATCATATATTTCATCTTATTTGCAGGTTCCAGTCATACAGATTCTACTTGGACAACTTGGGTTGGTATCAGGAGACCAAATGCTTTCTATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTTACACCATCAACAGACCCTTTAACTCAGATACTTCTGGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCAGGGCGATAG

mRNA sequence

ATGAATAACGTTGTGAGTCTTCTCTGGCTCGGGGAAAAAGACGAAGAGCCTAATGCGAGAGGAAGTGGAAGAGGAGAGGCGGAGGTGCTCGCAGAGCATGAACTGAAGGTCGTCATCGGAGGAGAGGGAGATGAGAGAGTCGAGGGCGGAGTGAGAAAGAAGAATAAGGGAAGAAGAAAGAAGAAAAAAAAAAAAAAAAAAAAATTCCGGCGACCGCCGCCGCCGCCGCCGTTCGCCGGCAGCCGGCGGCGGTCGGCCACCGGAGCTGAAGAAGATGGGAGGGGGAAGGAAGAAGATGGAGGGAGAAAGAAGAAAGCCAAAGAAGAGATGGCAAGCATCAGCGGTGCTCTGACATCGCATTTGCAGCTCAATCACTGCCGTTTCTCCGCTAGAACTTCCAAGCTTGCTTCAGCTCGAATCAGCCCACCGTCGAGAAGGTCGAAGTTGCGGTTCACCGGTTTGCCCAGCCGTAGAAATTTCAATAGATTTGTGTGTTCTGCCGTGGATGACGACGTGAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCGACCATCGTCGAGGATGGGCCAGATATCGCCGATAACTCAACAAATGGGGCTCCGGAAAGAAGTGATATATATAACTTTCTCTATCCCGATAAAGATCTACTTCCAGATGATAAAGAAATGAGTGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGGGCTGCAATTGTTGGATGCTTTGCATTTTCAAAAGAACTCATCTTAATTCTTGAAGCTCCTGTCAAAGCACAAGGTGTAAGGTTCCTGCAGCTTGCTCCTGGGGAGTTTTTCTTTACAACGTTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTTTATGAGATTATTGCCTTCGTTCTTCCAGGATTAACAAGAGCAGAAAGACGGTTTCTTGCGCCTATCGTCCTAGGCTCCTCTATACTTTTTTACGCAGGAATTGCCTTCTCCTACGTAGTCTTGACCCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTCATACAGATTCTACTTGGACAACTTGGGTTGGTATCAGGAGACCAAATGCTTTCTATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTTACACCATCAACAGACCCTTTAACTCAGATACTTCTGGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCAGGGCGATAG

Coding sequence (CDS)

ATGAATAACGTTGTGAGTCTTCTCTGGCTCGGGGAAAAAGACGAAGAGCCTAATGCGAGAGGAAGTGGAAGAGGAGAGGCGGAGGTGCTCGCAGAGCATGAACTGAAGGTCGTCATCGGAGGAGAGGGAGATGAGAGAGTCGAGGGCGGAGTGAGAAAGAAGAATAAGGGAAGAAGAAAGAAGAAAAAAAAAAAAAAAAAAAAATTCCGGCGACCGCCGCCGCCGCCGCCGTTCGCCGGCAGCCGGCGGCGGTCGGCCACCGGAGCTGAAGAAGATGGGAGGGGGAAGGAAGAAGATGGAGGGAGAAAGAAGAAAGCCAAAGAAGAGATGGCAAGCATCAGCGGTGCTCTGACATCGCATTTGCAGCTCAATCACTGCCGTTTCTCCGCTAGAACTTCCAAGCTTGCTTCAGCTCGAATCAGCCCACCGTCGAGAAGGTCGAAGTTGCGGTTCACCGGTTTGCCCAGCCGTAGAAATTTCAATAGATTTGTGTGTTCTGCCGTGGATGACGACGTGAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCGACCATCGTCGAGGATGGGCCAGATATCGCCGATAACTCAACAAATGGGGCTCCGGAAAGAAGTGATATATATAACTTTCTCTATCCCGATAAAGATCTACTTCCAGATGATAAAGAAATGAGTGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGGGCTGCAATTGTTGGATGCTTTGCATTTTCAAAAGAACTCATCTTAATTCTTGAAGCTCCTGTCAAAGCACAAGGTGTAAGGTTCCTGCAGCTTGCTCCTGGGGAGTTTTTCTTTACAACGTTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTTTATGAGATTATTGCCTTCGTTCTTCCAGGATTAACAAGAGCAGAAAGACGGTTTCTTGCGCCTATCGTCCTAGGCTCCTCTATACTTTTTTACGCAGGAATTGCCTTCTCCTACGTAGTCTTGACCCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTCATACAGATTCTACTTGGACAACTTGGGTTGGTATCAGGAGACCAAATGCTTTCTATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTTACACCATCAACAGACCCTTTAACTCAGATACTTCTGGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCAGGGCGATAG

Protein sequence

MNNVVSLLWLGEKDEEPNARGSGRGEAEVLAEHELKVVIGGEGDERVEGGVRKKNKGRRKKKKKKKKKFRRPPPPPPFAGSRRRSATGAEEDGRGKEEDGGRKKKAKEEMASISGALTSHLQLNHCRFSARTSKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSAVDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR

Homology

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BLAST of Lag0040341 vs. NCBI nr
Match: XP_022150565.1 (sec-independent protein translocase protein TATC, chloroplastic [Momordica charantia])

HSP 1 Score: 617.5 bits (1591), Expect = 9.4e-173
Identity = 323/345 (93.62%), Postives = 333/345 (96.52%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSARTSKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSAVD 169
           M SISGALTSHLQLNHC FSARTS+LASARISP SRRSKLRF+GL SRRNFNRFVCSAVD
Sbjct: 1   MGSISGALTSHLQLNHCHFSARTSQLASARISPTSRRSKLRFSGLLSRRNFNRFVCSAVD 60

Query: 170 DDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSVFD 229
           DDV EKQTELGGGNGSTIVEDGPDIA NST+ APE+ DIYNFLYP K+LLPDDKEMSVFD
Sbjct: 61  DDVIEKQTELGGGNGSTIVEDGPDIAQNSTDEAPEKGDIYNFLYPSKELLPDDKEMSVFD 120

Query: 230 HLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTLKV 289
           HLEELRQRIFVSVLAVG AIVGCFAFSKELILILEAPVK QGVRFLQLAPGEFFFTT+KV
Sbjct: 121 HLEELRQRIFVSVLAVGGAIVGCFAFSKELILILEAPVKEQGVRFLQLAPGEFFFTTVKV 180

Query: 290 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPAAL 349
           SGYCGLLLGSPVILYEIIAFVLPGLT+AERRFL PIVLGSSILFYAGIAFSY+VLTPAAL
Sbjct: 181 SGYCGLLLGSPVILYEIIAFVLPGLTKAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 240

Query: 350 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 409
           NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR
Sbjct: 241 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 300

Query: 410 YVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           YVVVGAVVAAA+LTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 YVVVGAVVAAAILTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 345

[Close]

BLAST of Lag0040341 vs. NCBI nr
Match: KAG6601263.1 (Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 615.9 bits (1587), Expect = 2.7e-172
Identity = 323/353 (91.50%), Postives = 339/353 (96.03%), Query Frame = 0


Query: 104 KKAKEEMASISGALTSHLQLNHCRFSART--SKLASARISPPSRRSKLRFTGLPSRRNFN 163
           +KA E+M SISGALTSHLQL+HCRFSART  S+LASARI P SRRSKLRF+ L SRRNFN
Sbjct: 33  QKATEDMGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFN 92

Query: 164 RFVCSAVDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPD 223
           RFVCSAVDDDVREKQT+LGGGN ST+VED PDIA++STNGAPE+SD+YNFLYP KDLLPD
Sbjct: 93  RFVCSAVDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPD 152

Query: 224 DKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGE 283
           DKEMSVFDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+LILEAPVK QGVRFLQL PGE
Sbjct: 153 DKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGE 212

Query: 284 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSY 343
           FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL PIVLGSS+LFYAGIAFSY
Sbjct: 213 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSY 272

Query: 344 VVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSG 403
           +VLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSG
Sbjct: 273 IVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSG 332

Query: 404 DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 333 DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 385

[Close]

BLAST of Lag0040341 vs. NCBI nr
Match: XP_022956650.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita moschata] >KAG7032053.1 Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 610.9 bits (1574), Expect = 8.8e-171
Identity = 320/347 (92.22%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSART--SKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSA 169
           M SISGALTSHLQL+HCRFSART  S+LASARI P SRRSKLRF+ L SRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 170 VDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSV 229
           VDDDVREKQT+LGGGN ST+VED PDIA++STNGAPE+SD+YNFLYP KDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 230 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTL 289
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+LILEAPVK QGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 290 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPA 349
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL PIVLGSS+LFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 350 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 409
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 410 WRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           WRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lag0040341 vs. NCBI nr
Match: XP_038892645.1 (sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispida])

HSP 1 Score: 610.5 bits (1573), Expect = 1.2e-170
Identity = 323/347 (93.08%), Postives = 333/347 (95.97%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSART--SKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSA 169
           M SISGALTSHLQL+HCRFSART  S+LA A ISP  RRSKLRFTGL SR+NFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSQSQLALAPISPTLRRSKLRFTGLLSRKNFNRFVCSA 60

Query: 170 VDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSV 229
           VDDDVREKQTELGGG GST+VED PDIA+NSTNGAPERSDIYNFLYP KDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGKGSTVVEDVPDIAENSTNGAPERSDIYNFLYPSKDLLPDDKEMSV 120

Query: 230 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTL 289
           FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVK QGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 290 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPA 349
           KVSGYCGLLLGSPVILYEIIAFVLPGLT+AER+FLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTKAERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 350 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 409
           ALNFFVSYA GAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQ+GLVSGDQMLSI
Sbjct: 241 ALNFFVSYAAGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQVGLVSGDQMLSI 300

Query: 410 WRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           WRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lag0040341 vs. NCBI nr
Match: XP_022982565.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxima])

HSP 1 Score: 609.4 bits (1570), Expect = 2.6e-170
Identity = 320/347 (92.22%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSART--SKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSA 169
           M SISGALTSHLQL+HCRFSA T  S+LASARISP SRRSKLRF+ L SRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 170 VDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSV 229
           VDDDVREKQT+LGGGN ST+VED PDIA++STNGAPE+SD+YNFLYP KDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 230 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTL 289
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+LILEAPVK QGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 290 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPA 349
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL PIVLGSS+LFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 350 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 409
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 410 WRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           WRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lag0040341 vs. ExPASy Swiss-Prot
Match: Q94G17 (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum OX=3888 GN=TATC PE=1 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 4.5e-125
Identity = 234/314 (74.52%), Postives = 273/314 (86.94%), Query Frame = 0


Query: 154 LPSRRNFNRFVCSAVDDDVREKQTELGGGNGSTI---VEDGP---DIADNSTNGA----- 213
           L   ++F+R VC AVDD++REKQ +    + + +   VE+ P   D+ D  +  A     
Sbjct: 40  LRKNKSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENFK 99

Query: 214 --PERSDIYNFLYPDKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELI 273
              ERS IY+FLYP K+LLPDDKEMS+FDHLEELR+RIF+SVL VG +I+GCFAFSK+L+
Sbjct: 100 EDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLV 159

Query: 274 LILEAPVKAQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERR 333
            ILEAPVK++GVRFLQLAPGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER+
Sbjct: 160 KILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERK 219

Query: 334 FLAPIVLGSSILFYAGIAFSYVVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFST 393
           FL PIVLGSS+LFYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFST
Sbjct: 220 FLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFST 279

Query: 394 GLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLG 453
           GLSFQVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQ+LLAAPLLG
Sbjct: 280 GLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLG 339

Query: 454 LYLGGAWVVKLSGR 455
           LYLGGAW+VKL+GR
Sbjct: 340 LYLGGAWMVKLAGR 353

[Close]

BLAST of Lag0040341 vs. ExPASy Swiss-Prot
Match: Q9SJV5 (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2)

HSP 1 Score: 438.0 bits (1125), Expect = 1.3e-121
Identity = 242/345 (70.14%), Postives = 280/345 (81.16%), Query Frame = 0


Query: 112 SISGALTSHLQLNHCRFSARTSKLASARIS--PPSRRSKLRFTGLPSRRNFNRFVCSAVD 171
           S S AL  H +L      + T +     ++     R + LR++ +  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 172 DDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSVFD 231
           DD  +  TE   G GS + +  PD +++ +      S +Y FLYP K+ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSEDRS------SSVYEFLYPRKEELPDDKEMTIFD 124

Query: 232 HLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTLKV 291
           HLEELR+RIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRFLQLAPGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 292 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPAAL 351
           SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL PIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 352 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 411
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 412 YVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of Lag0040341 vs. ExPASy Swiss-Prot
Match: C4IZX0 (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4577 GN=TATC PE=2 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 3.9e-121
Identity = 234/311 (75.24%), Postives = 261/311 (83.92%), Query Frame = 0


Query: 155 PSRRNFNRFVCSAVDDD--VREK----QTELGGGNGSTIVED---GPDIADNSTNG--AP 214
           P RR      C+AVD D  +RE     Q E         +ED   GP + + S  G    
Sbjct: 46  PERRRRQCLRCAAVDGDGALRESGPLPQKESPSSGIGAALEDPPPGPPVENGSFGGPSQE 105

Query: 215 ERSDIYNFLYPDKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILIL 274
           E+S +Y FLYP KDLLPDDKEMS+FDHLEELR RIF+SVLAVGAAI+GCFAFSK+L++ L
Sbjct: 106 EQSALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIFL 165

Query: 275 EAPVKAQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLA 334
           EAPV AQGVRFLQL+PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FL 
Sbjct: 166 EAPVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLG 225

Query: 335 PIVLGSSILFYAGIAFSYVVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLS 394
           PIVLGSS+LFY GI FSY VL+PAALNFFV+YA+GAVESLWSIDQYFEF+LVLMFSTGLS
Sbjct: 226 PIVLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLS 285

Query: 395 FQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYL 454
           FQVPVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYL
Sbjct: 286 FQVPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYL 345

[Close]

BLAST of Lag0040341 vs. ExPASy Swiss-Prot
Match: Q9AVE6 (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATC PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 2.8e-119
Identity = 224/285 (78.60%), Postives = 249/285 (87.37%), Query Frame = 0


Query: 174 EKQTELGGGNGSTIVEDGPDIADNSTNGA----PERSDIYNFLYPDKDLLPDDKEMSVFD 233
           +++    G  G+ + +  P    N + G      E+S +YNFLYP K+LLPDDKEMS+FD
Sbjct: 75  QREESPSGSLGAALEDPSPQPVQNGSFGGITEDEEQSSLYNFLYPSKELLPDDKEMSIFD 134

Query: 234 HLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTLKV 293
           HLEELR RIFVSVLAVGAAI+GCFA+SK+LI ILEAPV  QGVRFLQL+PGEFFFTTLKV
Sbjct: 135 HLEELRDRIFVSVLAVGAAILGCFAYSKDLIRILEAPVSVQGVRFLQLSPGEFFFTTLKV 194

Query: 294 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPAAL 353
           SGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFY GI FSY VL PAAL
Sbjct: 195 SGYCGLLLGSPVILYEIIAFVLPGLTRDERKFLGPIVLGSSVLFYLGIFFSYTVLAPAAL 254

Query: 354 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 413
           NFFV+YA+GAVESLWSIDQYFEFVLVL+FSTGLSFQVPVIQ+LLGQ+GLVS DQMLSIWR
Sbjct: 255 NFFVNYADGAVESLWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGLVSSDQMLSIWR 314

Query: 414 YVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           YVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 315 YVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKLTGR 359

[Close]

BLAST of Lag0040341 vs. ExPASy Swiss-Prot
Match: P54086 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=tatC PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.7e-77
Identity = 150/238 (63.03%), Postives = 188/238 (78.99%), Query Frame = 0


Query: 217 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQ 276
           D +PDD EMS+FDHL+ELR RIF+S+ AV   +V CF F K L+  L+ P  A  V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVP--AGTVKFLQ 78

Query: 277 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAG 336
           L+PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ERR L P+VLGSS+LF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 337 IAFSYVVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 396
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 397 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

[Close]

BLAST of Lag0040341 vs. ExPASy TrEMBL
Match: A0A6J1D8U0 (sec-independent protein translocase protein TATC, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018674 PE=3 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 4.6e-173
Identity = 323/345 (93.62%), Postives = 333/345 (96.52%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSARTSKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSAVD 169
           M SISGALTSHLQLNHC FSARTS+LASARISP SRRSKLRF+GL SRRNFNRFVCSAVD
Sbjct: 1   MGSISGALTSHLQLNHCHFSARTSQLASARISPTSRRSKLRFSGLLSRRNFNRFVCSAVD 60

Query: 170 DDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSVFD 229
           DDV EKQTELGGGNGSTIVEDGPDIA NST+ APE+ DIYNFLYP K+LLPDDKEMSVFD
Sbjct: 61  DDVIEKQTELGGGNGSTIVEDGPDIAQNSTDEAPEKGDIYNFLYPSKELLPDDKEMSVFD 120

Query: 230 HLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTLKV 289
           HLEELRQRIFVSVLAVG AIVGCFAFSKELILILEAPVK QGVRFLQLAPGEFFFTT+KV
Sbjct: 121 HLEELRQRIFVSVLAVGGAIVGCFAFSKELILILEAPVKEQGVRFLQLAPGEFFFTTVKV 180

Query: 290 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPAAL 349
           SGYCGLLLGSPVILYEIIAFVLPGLT+AERRFL PIVLGSSILFYAGIAFSY+VLTPAAL
Sbjct: 181 SGYCGLLLGSPVILYEIIAFVLPGLTKAERRFLGPIVLGSSILFYAGIAFSYIVLTPAAL 240

Query: 350 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 409
           NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR
Sbjct: 241 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 300

Query: 410 YVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           YVVVGAVVAAA+LTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 YVVVGAVVAAAILTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 345

[Close]

BLAST of Lag0040341 vs. ExPASy TrEMBL
Match: A0A6J1GYD1 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458314 PE=3 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 4.3e-171
Identity = 320/347 (92.22%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSART--SKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSA 169
           M SISGALTSHLQL+HCRFSART  S+LASARI P SRRSKLRF+ L SRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 170 VDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSV 229
           VDDDVREKQT+LGGGN ST+VED PDIA++STNGAPE+SD+YNFLYP KDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 230 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTL 289
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+LILEAPVK QGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 290 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPA 349
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL PIVLGSS+LFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 350 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 409
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 410 WRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           WRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lag0040341 vs. ExPASy TrEMBL
Match: A0A6J1J324 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481370 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.2e-170
Identity = 320/347 (92.22%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSART--SKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSA 169
           M SISGALTSHLQL+HCRFSA T  S+LASARISP SRRSKLRF+ L SRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 170 VDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSV 229
           VDDDVREKQT+LGGGN ST+VED PDIA++STNGAPE+SD+YNFLYP KDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 230 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTL 289
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+LILEAPVK QGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 290 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPA 349
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL PIVLGSS+LFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 350 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 409
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 410 WRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           WRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lag0040341 vs. ExPASy TrEMBL
Match: A0A5A7SVD3 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001410 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 2.3e-169
Identity = 316/347 (91.07%), Postives = 331/347 (95.39%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSART--SKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSA 169
           M SISG+L+SHLQL+HCRFSART  S+L S RISP  RR+KLR TG  SRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 170 VDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSV 229
           VDDDVREKQTELGGGNGST+VED PDIA NSTNGAP++SDIYNFLYP KDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 230 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTL 289
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LIL+LEAPVK QGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 290 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPA 349
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 350 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 409
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 410 WRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           WRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lag0040341 vs. ExPASy TrEMBL
Match: A0A1S3BG97 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489323 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 2.3e-169
Identity = 316/347 (91.07%), Postives = 331/347 (95.39%), Query Frame = 0


Query: 110 MASISGALTSHLQLNHCRFSART--SKLASARISPPSRRSKLRFTGLPSRRNFNRFVCSA 169
           M SISG+L+SHLQL+HCRFSART  S+L S RISP  RR+KLR TG  SRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 170 VDDDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSV 229
           VDDDVREKQTELGGGNGST+VED PDIA NSTNGAP++SDIYNFLYP KDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 230 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTL 289
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LIL+LEAPVK QGVRFLQL PGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 290 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPA 349
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 350 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 409
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 410 WRYVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           WRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lag0040341 vs. TAIR 10
Match: AT2G01110.1 (Sec-independent periplasmic protein translocase )

HSP 1 Score: 438.0 bits (1125), Expect = 9.5e-123
Identity = 242/345 (70.14%), Postives = 280/345 (81.16%), Query Frame = 0


Query: 112 SISGALTSHLQLNHCRFSARTSKLASARIS--PPSRRSKLRFTGLPSRRNFNRFVCSAVD 171
           S S AL  H +L      + T +     ++     R + LR++ +  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 172 DDVREKQTELGGGNGSTIVEDGPDIADNSTNGAPERSDIYNFLYPDKDLLPDDKEMSVFD 231
           DD  +  TE   G GS + +  PD +++ +      S +Y FLYP K+ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSEDRS------SSVYEFLYPRKEELPDDKEMTIFD 124

Query: 232 HLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKAQGVRFLQLAPGEFFFTTLKV 291
           HLEELR+RIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRFLQLAPGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 292 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLAPIVLGSSILFYAGIAFSYVVLTPAAL 351
           SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL PIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 352 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 411
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 412 YVVVGAVVAAAVLTPSTDPLTQILLAAPLLGLYLGGAWVVKLSGR 455
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

The following BLAST results are available for this feature:

BLAST of Lag0040341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150565.1	9.4e-173	93.62	sec-independent protein translocase protein TATC, chloroplastic [Momordica chara...	[more]
KAG6601263.1	2.7e-172	91.50	Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurb...	[more]
XP_022956650.1	8.8e-171	92.22	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita mosch...	[more]
XP_038892645.1	1.2e-170	93.08	sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispi...	[more]
XP_022982565.1	2.6e-170	92.22	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxim...	[more]

BLAST of Lag0040341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G17	4.5e-125	74.52	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
Q9SJV5	1.3e-121	70.14	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
C4IZX0	3.9e-121	75.24	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4...	[more]
Q9AVE6	2.8e-119	78.60	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
P54086	2.7e-77	63.03	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of Lag0040341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8U0	4.6e-173	93.62	sec-independent protein translocase protein TATC, chloroplastic OS=Momordica cha...	[more]
A0A6J1GYD1	4.3e-171	92.22	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita mos...	[more]
A0A6J1J324	1.2e-170	92.22	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita max...	[more]
A0A5A7SVD3	2.3e-169	91.07	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BG97	2.3e-169	91.07	sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo ...	[more]

BLAST of Lag0040341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01110.1	9.5e-123	70.14	Sec-independent periplasmic protein translocase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 318..344 score: 44.03 coord: 300..318 score: 54.92 coord: 226..253 score: 38.81 coord: 369..397 score: 45.61
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 229..437 e-value: 8.5E-61 score: 205.4
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAM	TIGR00945	TIGR00945	coord: 228..442 e-value: 4.4E-81 score: 269.9
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 156..454
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 222..454 score: 16.60457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..72
None	No IPR available	PANTHER	PTHR30371:SF6	SEC-INDEPENDENT PERIPLASMIC PROTEIN TRANSLOCASE TATC-RELATED	coord: 156..454
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 369..388

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040341.1	Lag0040341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009567	double fertilization forming a zygote and endosperm
biological_process	GO:0065002	intracellular protein transmembrane transport
biological_process	GO:0043953	protein transport by the Tat complex
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031361	integral component of thylakoid membrane
cellular_component	GO:0043235	receptor complex
cellular_component	GO:0033281	TAT protein transport complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity