Lag0040334 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040334
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Rad60-SLD domain-containing protein
Location	chr13: 3942158 .. 3945069 (+)
RNA-Seq Expression	Lag0040334
Synteny	Lag0040334

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAAGCAGAACGATGGGAAACAGGAAAGTAAGAGCAAGAGGAGGGTCCGAGAATAGAGTTCGGGCCCCCCTCTTCAGTGGCGGGTATAAATATATGCTCATGCTCCTAGGGTTTTTAGGAGTTCAGAGGCGTTTCGGGACAAACCAGGCGGAATCGGGGCGGCCAGAGGCGGTAGGGACCAAACGGAGCATGACGAGCTTGGCCAGGGGGTCGGGCTCCTTCGGTCTTAGCCCGTCCCACTTGCCGGTTTCGTCTCTGGGGTCCATCTCCCAACCTTATTTCTGCTCGGTTGTTCTCGTCAACTCCTTGTACATCGGAGTGGTCCAAATTTACCTATAACAATAATAATAATAATTATTATTATTATTATTATTATTATTATTTTAGAAATGGATTCAATGATTGCTGAAATGGTGTTTCAATCAAATTCTTGAACTATAAGATTGTTTGAATTAAACCTAAGTTATTTACACTAATTTCATCGGGCATAAAAATCGGGTCGACCCGTACCCGCTAAACCAAATTGGATATAAAAGCCGACCGACCCATTATTTGAAAGAGAAATTCAAGAAGCTCTCACCCTCGCTAGGTAACGATTCGAAGGCAAACGGACAGTGAATTTGAATTCTCCGGCCGGATTCGACCAGGATTTATCGAAGAAGAAGAAGAACAGTTTAGATTTCGTGGTCTTTGATAATGGTGAGTCTATTTCTCTCTTTAATTTCATGGGCATGGGTTTCTTTTCTGTATCATTGCTACTCATGATTTCCCCTTCTCATTTATTGATTCTTACTTTGAGTTCTTATTTTCAGGCGGATTCCGCTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCTCCGTTGTTTGTATCGACGGTAATGGTTCTCAAGCATCGATTATGTTGGAATTTCATGAAAGTGTGAATCTTCTATTTCTTTGTGTTTGAAGTATATATAATTCTCGCTTGAGCTAGGAATGTCGAAATTGAGTTTCCTTGTGCTTGCAATCTTCGAAACCGACGGTAATTTTGTTCTTTATTTTTCTTCTGTTTGGACTTAAAACATTAGACGAGGATTCGGACGCAGACGTGTCTCGGGAACCTCTTTCTAAGCGGGCGAAGATTTCAAATTCGAGGGTATGTAATTCTCTTCATGTAGTGTAAAAGTGGACTTTCTGTTTGCATAAGATTAAAGTTCGTTGGAACAGTCAGTGAAGCTAGTTTGATGTGATTATTTCATTTCAATCAATATTTAGGTTACGAGTTTGGTGGATGGTAACCCAAAAGACAATCAAGTTGTGGAAATTGAAGATAAAGAGGAAGATTGGCTACCTCCTCCACCGAAGGTGTCTGTTGATGCAAAAGATATGTGTGGGCAAGATTCCACGTTGAAGGAGTTAAGGTATTCCAACTTAGTGGTATGCATCTATTGCTTGTTTAATACATTGATATATCAAAGTGGAACTCTTATTCTTTCTGTGCACAAGCTGCTATGGCTTGTGTCTCGGGCCATTTTGCCTTCACATTTCATATGTAATCTGCACTGATAGGTTAAAGAAGCAAGAGTTGGCCTCAGTTGCACTGTCGGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGAAACACGCCCCAGGCCTCCCTGGAGCCTGCTTTGGATGACCAAACTCAAATTGCTTCTAAAGAAAGAGCAAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCCTGTTTGTGGTATGTCCATGTGTATGTGCATGTTATCATACTCAGATTTCGCCTTCTTCAAGTGCAACCATCCTGTTTTGTCAATATAGCTCATGATTTAGGATCACTGTTTTTGATATACCTGCAAGATGCCTTCAATTTGCTCCACGATCTTGCATTGGTTGGCTTGTTTAGAATCATGTGTAGGGAATGAATGAATTTGGTGAAGTTGGGTTGTCAAAAAAGAAGATTGAGAAAAAGAAATGTGTACAGACTATGGTAGATTGCTTAACATCGTATCTTGCTTCATATTATACGTCAGCAAATCTTAAAACATTAATCAAAAAAGGGTTTTGCGAAGAACTGGAATTCTTTCAATTGATTGTTAAAAAGGCAGAATAAATTTAAACTTTCTCCTTGAAATTCCTGTCTTGGCATAGAGTCTTTTTATTATCTTGAAGAAAGTATGGTGTTCAGGCCTTGGTTACTTTCTCGTTCTCAATAGTGATTAGCCACATGTTCTCTTTAATTTGATTTTCTTGTCTTTCCCTTCCACGTTATGATTGCCTTAACTTCTCTGTTGTTACATGGTGATCATTAGTTTCTGCTATTTTGAATGTGATTTTTTTAGAATTATGGTTCTTTGTATGATTCATCCACATTTAGATTATATGATGAAAGCACTGTAGGTCTCCAATGGTTATGGTACTTCGGACATTATTTGATTGAACTACTTTAGAAGAGATTTCCTGATTATATATATATAATACACCTTGCCTTGTTGGATAGATCTCGCTCTTCTCGGCTCCATAGTTTCTATCTTCGTATCAGTTTTTTAGATTGTTGTTGAAATGAGCTATCTTTTGCCGTTGTCTTTGGCAGGGTGTGAAGCACTACAGGCCGTAGTATTTCTTATATTACTACCTATGTTAGTCATTTCAAAAGTGCTACCAAACATACTCTAATATGGTTTTAATTTTAATGTTATAGGATGACAAGTTTGAGCGACTTTTCAAAATGTATGCGGACAAACTTAAAATCGACCCTAAGAGTTTGGTTTTCATTTTCGATGGTGATAAAGTCAGCCCAGGCGACACCCCAGTTGGCCTTGGCATGGAAGACGATGATATGATCGAAGTGAACATCAAGTCGAGTTGA

mRNA sequence

ATGCTAAGCAGAACGATGGGAAACAGGAAAGTAAGAGCAAGAGGAGGGTCCGAGAATAGAGTTCGGGCCCCCCTCTTCAGTGGCGGGTATAAATATATGCTCATGCTCCTAGGGTTTTTAGGAGTTCAGAGGCGTTTCGGGACAAACCAGGCGGAATCGGGGCGGCCAGAGGCGGTAGGGACCAAACGGAGCATGACGAGCTTGGCCAGGGGGTCGGGCTCCTTCGGTCTTAGCCCGTCCCACTTGCCGGTTTCGTCTCTGGGGTCCATCTCCCAACCTTATTTCTGCTCGGTTGTTCTCGTCAACTCCTTGTACATCGGAGTGGCGGATTCCGCTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCTCCGTTGTTTGTATCGACGACGAGGATTCGGACGCAGACGTGTCTCGGGAACCTCTTTCTAAGCGGGCGAAGATTTCAAATTCGAGGGTTACGAGTTTGGTGGATGGTAACCCAAAAGACAATCAAGTTGTGGAAATTGAAGATAAAGAGGAAGATTGGCTACCTCCTCCACCGAAGGTGTCTGTTGATGCAAAAGATATGTGTGGGCAAGATTCCACGTTGAAGGAGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCAGTTGCACTGTCGGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGAAACACGCCCCAGGCCTCCCTGGAGCCTGCTTTGGATGACCAAACTCAAATTGCTTCTAAAGAAAGAGCAAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCCTGTTTGTGGATGACAAGTTTGAGCGACTTTTCAAAATGTATGCGGACAAACTTAAAATCGACCCTAAGAGTTTGGTTTTCATTTTCGATGGTGATAAAGTCAGCCCAGGCGACACCCCAGTTGGCCTTGGCATGGAAGACGATGATATGATCGAAGTGAACATCAAGTCGAGTTGA

Coding sequence (CDS)

ATGCTAAGCAGAACGATGGGAAACAGGAAAGTAAGAGCAAGAGGAGGGTCCGAGAATAGAGTTCGGGCCCCCCTCTTCAGTGGCGGGTATAAATATATGCTCATGCTCCTAGGGTTTTTAGGAGTTCAGAGGCGTTTCGGGACAAACCAGGCGGAATCGGGGCGGCCAGAGGCGGTAGGGACCAAACGGAGCATGACGAGCTTGGCCAGGGGGTCGGGCTCCTTCGGTCTTAGCCCGTCCCACTTGCCGGTTTCGTCTCTGGGGTCCATCTCCCAACCTTATTTCTGCTCGGTTGTTCTCGTCAACTCCTTGTACATCGGAGTGGCGGATTCCGCTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCTCCGTTGTTTGTATCGACGACGAGGATTCGGACGCAGACGTGTCTCGGGAACCTCTTTCTAAGCGGGCGAAGATTTCAAATTCGAGGGTTACGAGTTTGGTGGATGGTAACCCAAAAGACAATCAAGTTGTGGAAATTGAAGATAAAGAGGAAGATTGGCTACCTCCTCCACCGAAGGTGTCTGTTGATGCAAAAGATATGTGTGGGCAAGATTCCACGTTGAAGGAGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCAGTTGCACTGTCGGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGAAACACGCCCCAGGCCTCCCTGGAGCCTGCTTTGGATGACCAAACTCAAATTGCTTCTAAAGAAAGAGCAAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCCTGTTTGTGGATGACAAGTTTGAGCGACTTTTCAAAATGTATGCGGACAAACTTAAAATCGACCCTAAGAGTTTGGTTTTCATTTTCGATGGTGATAAAGTCAGCCCAGGCGACACCCCAGTTGGCCTTGGCATGGAAGACGATGATATGATCGAAGTGAACATCAAGTCGAGTTGA

Protein sequence

MLSRTMGNRKVRARGGSENRVRAPLFSGGYKYMLMLLGFLGVQRRFGTNQAESGRPEAVGTKRSMTSLARGSGSFGLSPSHLPVSSLGSISQPYFCSVVLVNSLYIGVADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKDNQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEESAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS

Homology

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BLAST of Lag0040334 vs. NCBI nr
Match: XP_023541755.1 (uncharacterized protein LOC111801815 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 7.3e-98
Identity = 194/226 (85.84%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +ADSAEEFEPLFDYSRVQPRSVVC+DDEDSD + SR P SKR KISNS VT+ V     +
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFV-----E 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
           N VVEIEDKEEDWLPPPPKVSVDAKDMCG+DSTLK+LRLKKQELASVALSAKNLLREVEE
Sbjct: 61  NPVVEIEDKEEDWLPPPPKVSVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SAKVDVG TP  SLEPA+DDQ  IASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFK
Sbjct: 121 SAKVDVGTTPHVSLEPAVDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MYADKLKIDPKSLVF+FDGDKV P DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 MYADKLKIDPKSLVFVFDGDKVGPDDTPVSLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Lag0040334 vs. NCBI nr
Match: XP_022968592.1 (uncharacterized protein LOC111467764 [Cucurbita maxima])

HSP 1 Score: 366.3 bits (939), Expect = 2.8e-97
Identity = 194/226 (85.84%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +ADSAEEFEPLFDYSRVQPRSVVC+DDEDSD + SR P SKR KISNS VT+LV     D
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNLV-----D 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
           NQ VE EDKEEDWLPPPPKVSVDAKDM G+DSTLK+LRLKKQELASVALSAKNLLREVEE
Sbjct: 61  NQAVENEDKEEDWLPPPPKVSVDAKDMYGEDSTLKKLRLKKQELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SAKVDVG TP  SL+PA+DDQ  IASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFK
Sbjct: 121 SAKVDVGTTPHVSLDPAVDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MYADKLKIDPKSLVF+FDGDKV P DTPVGLGMEDDDMIEVNIKSS
Sbjct: 181 MYADKLKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Lag0040334 vs. NCBI nr
Match: XP_022945140.1 (uncharacterized protein LOC111449468 [Cucurbita moschata] >KAG6573932.1 Small ubiquitin-related modifier, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.8 bits (935), Expect = 8.1e-97
Identity = 192/226 (84.96%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +ADSAEEFEPLFDYSRVQP SVVC+DDEDSD + SR P SKR KISNS VT+ V     +
Sbjct: 1   MADSAEEFEPLFDYSRVQPHSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFV-----E 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
           N  VEIEDKEEDWLPPPPKVSVDAKDMCG+DSTLK+LRLKKQELASVALSAKNLLREVEE
Sbjct: 61  NPFVEIEDKEEDWLPPPPKVSVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SA+VDV NTPQ SLEPALDDQ  IASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFK
Sbjct: 121 SARVDVENTPQVSLEPALDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MY++KLKIDPKSLVF+FDGDKV P DTPVGLGMEDDDMIEVNIKSS
Sbjct: 181 MYSNKLKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Lag0040334 vs. NCBI nr
Match: KAG7012997.1 (Small ubiquitin-related modifier [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363.6 bits (932), Expect = 1.8e-96
Identity = 191/226 (84.51%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +ADSAEEFEPLFDYSRVQP SVVC+DDEDSD + SR P SKR KISNS VT+ V     +
Sbjct: 1   MADSAEEFEPLFDYSRVQPHSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFV-----E 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
           N  VEIEDKEEDWLPPPPKV+VDAKDMCG+DSTLK+LRLKKQELASVALSAKNLLREVEE
Sbjct: 61  NPFVEIEDKEEDWLPPPPKVAVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SA+VDV NTPQ SLEPALDDQ  IASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFK
Sbjct: 121 SARVDVENTPQVSLEPALDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MY++KLKIDPKSLVF+FDGDKV P DTPVGLGMEDDDMIEVNIKSS
Sbjct: 181 MYSNKLKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Lag0040334 vs. NCBI nr
Match: XP_038891511.1 (uncharacterized protein LOC120080907 [Benincasa hispida])

HSP 1 Score: 362.1 bits (928), Expect = 5.2e-96
Identity = 194/226 (85.84%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +ADSAEEFEPLFDYSRVQPRSVVC+DDEDSDAD S  P SKR KI N   TSLVD NPK+
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDADKSPAPFSKRVKIVNPAATSLVDSNPKE 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
            Q VEIEDKEEDWLPPPPKV VDA++MCG+DSTLKELRLKKQELASVALSAKNLLREVEE
Sbjct: 61  KQ-VEIEDKEEDWLPPPPKVLVDAENMCGEDSTLKELRLKKQELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SAKVDVGN P  SLEP LD QT IASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK
Sbjct: 121 SAKVDVGNKPD-SLEPDLDVQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MYADK KIDPK+L+F+FDGDKV P DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 MYADKHKIDPKNLIFVFDGDKVGPDDTPVSLGMEDDDMIEVNIKSS 224

[Close]

BLAST of Lag0040334 vs. ExPASy Swiss-Prot
Match: P55853 (Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.9e-05
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 0


Query: 246 DDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFIFD 305
           DD  Q A      I I V   D  E+  FR+       +L K YAD+  +   SL F+FD
Sbjct: 3   DDAAQ-AGDNAEYIKIKVVGQDSNEV-HFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFD 62

Query: 306 GDKVSPGDTPVGLGMEDDDMIEV 329
           G +++  DTP  L MEDDD+IEV
Sbjct: 63  GRRINDDDTPKTLEMEDDDVIEV 83

[Close]

BLAST of Lag0040334 vs. ExPASy TrEMBL
Match: A0A6J1HTX5 (uncharacterized protein LOC111467764 OS=Cucurbita maxima OX=3661 GN=LOC111467764 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.3e-97
Identity = 194/226 (85.84%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +ADSAEEFEPLFDYSRVQPRSVVC+DDEDSD + SR P SKR KISNS VT+LV     D
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNLV-----D 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
           NQ VE EDKEEDWLPPPPKVSVDAKDM G+DSTLK+LRLKKQELASVALSAKNLLREVEE
Sbjct: 61  NQAVENEDKEEDWLPPPPKVSVDAKDMYGEDSTLKKLRLKKQELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SAKVDVG TP  SL+PA+DDQ  IASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFK
Sbjct: 121 SAKVDVGTTPHVSLDPAVDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MYADKLKIDPKSLVF+FDGDKV P DTPVGLGMEDDDMIEVNIKSS
Sbjct: 181 MYADKLKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Lag0040334 vs. ExPASy TrEMBL
Match: A0A6J1G027 (uncharacterized protein LOC111449468 OS=Cucurbita moschata OX=3662 GN=LOC111449468 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.9e-97
Identity = 192/226 (84.96%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +ADSAEEFEPLFDYSRVQP SVVC+DDEDSD + SR P SKR KISNS VT+ V     +
Sbjct: 1   MADSAEEFEPLFDYSRVQPHSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFV-----E 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
           N  VEIEDKEEDWLPPPPKVSVDAKDMCG+DSTLK+LRLKKQELASVALSAKNLLREVEE
Sbjct: 61  NPFVEIEDKEEDWLPPPPKVSVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SA+VDV NTPQ SLEPALDDQ  IASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFK
Sbjct: 121 SARVDVENTPQVSLEPALDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MY++KLKIDPKSLVF+FDGDKV P DTPVGLGMEDDDMIEVNIKSS
Sbjct: 181 MYSNKLKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Lag0040334 vs. ExPASy TrEMBL
Match: A0A6J1H158 (uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC111458628 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 9.6e-96
Identity = 192/226 (84.96%), Postives = 205/226 (90.71%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +AD AEEFEPLFDYSRVQPRSV C+DDEDSDA +S EP SKR++I N  VTSLVDG  KD
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGIRKD 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
            Q VEIED+EEDWLPPPPKVSVDAK+MCG+DSTLKELRL K ELASVALSAKNLLREVEE
Sbjct: 61  KQ-VEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SAK+DVGNTPQ  LEPALDDQ  IASKERAKIVISVRDSDKEELKQFRLF+DDKFERLFK
Sbjct: 121 SAKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MYA+K KIDPKSLVFIFDGDKVSP DTP GLGMEDDDMI+VNI+SS
Sbjct: 181 MYAEKRKIDPKSLVFIFDGDKVSPDDTPTGLGMEDDDMIDVNIRSS 225

[Close]

BLAST of Lag0040334 vs. ExPASy TrEMBL
Match: A0A6J1JEF8 (uncharacterized protein LOC111483658 OS=Cucurbita maxima OX=3661 GN=LOC111483658 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.8e-94
Identity = 187/226 (82.74%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +AD AEEFEPLF+YSRV PRSV C+D+EDSDA +S EP SKR++I N  VTSLVDGNPK+
Sbjct: 1   MADYAEEFEPLFNYSRVHPRSVDCLDEEDSDACMSPEPFSKRSRILNPAVTSLVDGNPKE 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
            Q VEIED+EEDWLPPPPKVSVDAK+MCG+DSTLKELRL K ELASV LSAKNLLREVEE
Sbjct: 61  KQ-VEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVTLSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SAK+DVGNTPQ  LEPALDDQ  IASKERAKIVISVRDSDKEELKQFR+F+DDKFERLFK
Sbjct: 121 SAKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRIFMDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           MYA+K KIDPKSLVFIFDGDKV P DTPVGLGMEDDDMI+VNI+ S
Sbjct: 181 MYAEKRKIDPKSLVFIFDGDKVGPDDTPVGLGMEDDDMIDVNIRPS 225

[Close]

BLAST of Lag0040334 vs. ExPASy TrEMBL
Match: A0A0A0KWH7 (Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.3e-92
Identity = 188/226 (83.19%), Postives = 200/226 (88.50%), Query Frame = 0


Query: 108 VADSAEEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKD 167
           +ADSAEEFEPLFDYSRVQP SVVC+DDEDSDAD S  P +KRAKI N   TS V+GNPK+
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIVNPAATSSVNGNPKE 60

Query: 168 NQVVEIEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEE 227
            Q VEIEDKEEDWLPPPPKV VDA++   +DSTLKELRLKKQELASVALSAKNLLREVEE
Sbjct: 61  KQ-VEIEDKEEDWLPPPPKVLVDAENRHVEDSTLKELRLKKQELASVALSAKNLLREVEE 120

Query: 228 SAKVDVGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFK 287
           SAKVDVGNT    LEP LD QT +ASKERAKIVISVRDSDKEELKQ+RLFVDDKFERLFK
Sbjct: 121 SAKVDVGNTSMDPLEPDLDVQTPVASKERAKIVISVRDSDKEELKQYRLFVDDKFERLFK 180

Query: 288 MYADKLKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
           +YADKLKIDPKSLVF+FDGDKV P DTP GLGMEDDDMIEVNIKSS
Sbjct: 181 LYADKLKIDPKSLVFVFDGDKVGPDDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of Lag0040334 vs. TAIR 10
Match: AT1G68185.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 4.5e-45
Identity = 106/221 (47.96%), Postives = 146/221 (66.06%), Query Frame = 0


Query: 113 EEFEPLFDYSRVQPRSVVCIDDEDSDADVSREPLSKRAKISNSRVTSLVDGNPKDNQVVE 172
           E+ EPLFDY RVQP + VCIDD+D DA V+  P+ K+AK S +     V+    D +V+E
Sbjct: 6   EDLEPLFDYRRVQPANFVCIDDDDDDASVT--PIPKKAKTSQT-----VEKLDDDVKVIE 65

Query: 173 IEDKEEDWLPPPPKVSVDAKDMCGQDSTLKELRLKKQELASVALSAKNLLREVEESAKVD 232
           +   ++DWL PPPKV  D      +DST+K LR KK EL S   +  ++++EVEESAK +
Sbjct: 66  VTG-DDDWLLPPPKVIFDKSKDSVEDSTIKALRSKKMELMSFTKTVGDVMQEVEESAKRE 125

Query: 233 VGNTPQASLEPALDDQTQIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADK 292
           V  +   S E A    ++  + +RAKIVI+++D D +  K  R+F D+KFER+ K+Y DK
Sbjct: 126 VEESRNPSSETAAQLPSE-PTNDRAKIVITIQDKDGQ--KTLRVFADEKFERVIKLYTDK 185

Query: 293 LKIDPKSLVFIFDGDKVSPGDTPVGLGMEDDDMIEVNIKSS 334
            K+DP++LVFIFDGDK+ P  TP  LGMED DMIEV+ K +
Sbjct: 186 AKLDPQNLVFIFDGDKIDPSTTPSELGMEDHDMIEVHTKKT 215

[Close]

BLAST of Lag0040334 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.0e-04
Identity = 23/69 (33.33%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 259 IVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFIFDGDKVSPGDTPVGL 318
           I + V++ D +    FR+  D +  ++   Y+DK+ ++  +L F+FDG+++    TP  L
Sbjct: 15  ITVKVKNQD-DICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRIKLNQTPNEL 74

Query: 319 GMEDDDMIE 328
           G+ED+D IE
Sbjct: 75  GLEDEDEIE 82

The following BLAST results are available for this feature:

BLAST of Lag0040334 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541755.1	7.3e-98	85.84	uncharacterized protein LOC111801815 [Cucurbita pepo subsp. pepo]	[more]
XP_022968592.1	2.8e-97	85.84	uncharacterized protein LOC111467764 [Cucurbita maxima]	[more]
XP_022945140.1	8.1e-97	84.96	uncharacterized protein LOC111449468 [Cucurbita moschata] >KAG6573932.1 Small ub...	[more]
KAG7012997.1	1.8e-96	84.51	Small ubiquitin-related modifier [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038891511.1	5.2e-96	85.84	uncharacterized protein LOC120080907 [Benincasa hispida]	[more]

BLAST of Lag0040334 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55853	9.9e-05	40.96	Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1...	[more]

BLAST of Lag0040334 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTX5	1.3e-97	85.84	uncharacterized protein LOC111467764 OS=Cucurbita maxima OX=3661 GN=LOC111467764...	[more]
A0A6J1G027	3.9e-97	84.96	uncharacterized protein LOC111449468 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]
A0A6J1H158	9.6e-96	84.96	uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A6J1JEF8	1.8e-94	82.74	uncharacterized protein LOC111483658 OS=Cucurbita maxima OX=3661 GN=LOC111483658...	[more]
A0A0A0KWH7	1.3e-92	83.19	Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 P...	[more]

BLAST of Lag0040334 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68185.1	4.5e-45	47.96	Ubiquitin-like superfamily protein	[more]
AT5G55856.1	1.0e-04	33.33	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 230..331 e-value: 1.1E-19 score: 72.8
None	No IPR available	PANTHER	PTHR47813	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 109..333
None	No IPR available	CDD	cd01763	Ubl_SUMO_like	coord: 258..328 e-value: 3.94326E-23 score: 89.1764
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 259..330 e-value: 1.8E-11 score: 43.6
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 249..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040334.1	Lag0040334.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding