
Lag0040325 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCAACTCCGGCGCCCAACGCAGCTTTCTGCATTCCATTTTTGGTTATGGCAAAGGTTCGTACACAATCTTCCCATTCTTCTAGTTTTATCTCAACTTCTTTTACTTTTTTAACTTTTTACCCTTTTCTTTTTAATACTTTCAAGACGTTATTTAAAAAAAAAAAAAATGATCGATTTGATCTAAGTATGTAAAATTCTAACACAAATTCTATATACAATAAATAGTTTTTAATATTTGCAAAAAAAAAAAACAATTTTTAATACAAAATTATGATGATATTTTAAGAAATTTATATTGAGTATAAATATAGCGTTGGCTATGAAATTGTGATAAAGAAAGAAAATAAATAGATCAAAATGATCATTTTTTTTTAGAAGTGCATCAACCAAAATGAATATCTTGAAAATATGAGGGTCAAAAAAGACAAAAATAAAGCTTAGTTTAATATCCATTTGATTTTTGAAAAATATATTTGATTTCTCTGAGTCTCAACTTCCTTACTGTTATTTACATTTTTTTTGTTGAGGATATATTTAAATTCTTAGCTAAATTCTGAAAAACAAAAATAAGTTTAATAAAATTCATGAATTTTACATAACATCTAATAGATTCATACACTTTCAATTTTGTGGCTAATGAGTCTTTTACTTTAATTGACCTTCACAAATTTATTTTACACAAAATTGAAAGTTTAAAGTTTTATAAGAGATAATTGTAGCTAATAGATTTGTTAATTTTGAAAAATGTCAAATACAAACCAATTAGACAAGAAATTTAAAATTCTGAAGTCTATAGACCTATTACAAAAGATAAAATTGAAAATTTTAAAAACTTATCAAATACCTTTCAAAGTCAAGAAACTAAAAGTTCATAAACAAAATTTGCAATTAAACGGATTCGGTATCATTTGATTGTTGTTTATTAGATATATTTTTTCAAATTCAAAAAGCTATGAAACACGTATTTAAAAATTCATAGACTAAACTTGTAATTTAACCAGAATCGAATCTAAATAAGAGTGTTTGGATTTGAAGTGCAGTGGCAGACATGATGTTATGGAAGAACAGGACAGAATCGGCGGCGATGTTGGGCGGATTCAGTGCCATTTGGTTGCTGTTTGTGGTTTTAGATTACCATTTTCTTACTCTTCTTTCCTATCTCCTCATCTTTCTCATGCTTCTTCTCTTCTCTTGGAACAAATTGGCACTTTTCACCCAATGGTATATTTTTCTCACTATTTCTCTCTCTTCATTTTCATTTCGGATTATATTTTTAGTCAAATTGTACTTCTTAAAATTTAGATAAGTGTTGTAGTCTTTAACCCTTTGATAAGTTTTCGTTTGAAAAAGTAGTCTCGGATACAAAATCGAAAAAAACGACATTAGAGTTAAATTTTTGTTGAATTTTGTGAATTTTGATGGTTAATTTGTGCACTGACCAAACTTAATGAGTTTGTGAAGATTTTATATGAGTTTTTTTTTTACCTAGTGGGTGAATTAGTGGAAATTAAACAAATAGCTAAATTTGTAATATTTGTGTAAGTTTAGGGTGAAAATTGATACAACTGGACAATTTAATTGTAAAATTTGTTTTTTTATTCCCTATTTGTAAGAACTTATATATTGGTAATATAATTAGTTGGGTTTTATTATTATTATTTTTTTTGGCAGGAGTCCACCCAATGCTCATGATTTTGAAATCTCAAGGTCCACTCTCACACATTTCTTTGATACATTCAACCGCTTGCTCTACATCTTCTTTGAAATTTCAAGTGGCCGTGACTTTAAGCTCTTTGCAATGGTACCCTCCCAAATCTAATAATTTCATATAAATCACTTCAAATTTGTGTTTTAGTTTTACCTTTCTTTAAAATGCTCCTCAAATGAAAATTTAAGAAAATGTCTAATAGATCCTTCAACTTTCAATTTTATGTCCAATAATATTCCTCTAAATTTTCAATTTTGTGCATAATATCCTCGACTTATTTGATATTTTTAAAATTCAAAATCAACATGACACAAAGTTAAAAGTTTATGATCCAATTAGACATAAAATTTAATTTAGACTAGTTACCTTTTAAGATGTTTGAATACGAAGATGACGTATCAAACACAAAATTGAAAGTTCAAGAACTCTATTGGACATAAATTATAAAAAATACTCCTGAACTATGAGGTTTGTTTCAAAAATGTCCTTGAACTTTGAAAAGTTTCAAAAATACCCCTAAACTTTGAAAAATGTTTCAAAAATATCCTTGAACTTTAAAAAAAAAAAATTAAAAAAGGCCCCTATTGAAAAATATGTCATCTTTTTTCCTCCTCTCACCATAAATTCTAACGGTTTCTATCCAAAAATTAACGATAAGAGTATTTTTGAAACTTTTCAAAGTTCAGGGGCATTTTTTAAACAAACCCTATAGTTCAGGGGTATTTTTTTTTTTTATAATTTAGCCTTTTTTAAATTAAGGAAGCTATTAGATACAAAATCGAAACTTCAGAAATCTATTAAACACTTGTTAGAGCTGCTTGAAGACAAACTTAAAATTTCAAGACTAAACTTATAATTGAACGAAGAACAATACTTGGTTGCAGGTAATGGGCGGTCTTGGGTTGTTATCAGTGATTGGGGAGCTGACTAACTCATTGAATCTCATATACATTGGTACACTCTCTTTTTCTCTCTCTCTCTACAGATTTGATCTCTTCTGAAACTAATTAACTTTGATGAACAAAAATGGATCAGTGTTTGTGAGCTTACAAGTGGTTCCTGTTGTGTTCGACAAGTACGAGGAAGAATTGAAGCAGGTTGCCTCTCAGCTCAAATCTATTATGGACGCCTTCTTCCACACTCTTCACTCCAATTTTTTCAGCAAAATCCCAAGGAGGCATAGGGACCAATCCAAACAAACTTAA ATGTCCAACTCCGGCGCCCAACGCAGCTTTCTGCATTCCATTTTTGGTTATGGCAAAGTGGCAGACATGATGTTATGGAAGAACAGGACAGAATCGGCGGCGATGTTGGGCGGATTCAGTGCCATTTGGTTGCTGTTTGTGGTTTTAGATTACCATTTTCTTACTCTTCTTTCCTATCTCCTCATCTTTCTCATGCTTCTTCTCTTCTCTTGGAACAAATTGGCACTTTTCACCCAATGGAGTCCACCCAATGCTCATGATTTTGAAATCTCAAGGTCCACTCTCACACATTTCTTTGATACATTCAACCGCTTGCTCTACATCTTCTTTGAAATTTCAAGTGGCCGTGACTTTAAGCTCTTTGCAATGGTAATGGGCGGTCTTGGGTTGTTATCAGTGATTGGGGAGCTGACTAACTCATTGAATCTCATATACATTGTGTTTGTGAGCTTACAAGTGGTTCCTGTTGTGTTCGACAAGTACGAGGAAGAATTGAAGCAGGTTGCCTCTCAGCTCAAATCTATTATGGACGCCTTCTTCCACACTCTTCACTCCAATTTTTTCAGCAAAATCCCAAGGAGGCATAGGGACCAATCCAAACAAACTTAA ATGTCCAACTCCGGCGCCCAACGCAGCTTTCTGCATTCCATTTTTGGTTATGGCAAAGTGGCAGACATGATGTTATGGAAGAACAGGACAGAATCGGCGGCGATGTTGGGCGGATTCAGTGCCATTTGGTTGCTGTTTGTGGTTTTAGATTACCATTTTCTTACTCTTCTTTCCTATCTCCTCATCTTTCTCATGCTTCTTCTCTTCTCTTGGAACAAATTGGCACTTTTCACCCAATGGAGTCCACCCAATGCTCATGATTTTGAAATCTCAAGGTCCACTCTCACACATTTCTTTGATACATTCAACCGCTTGCTCTACATCTTCTTTGAAATTTCAAGTGGCCGTGACTTTAAGCTCTTTGCAATGGTAATGGGCGGTCTTGGGTTGTTATCAGTGATTGGGGAGCTGACTAACTCATTGAATCTCATATACATTGTGTTTGTGAGCTTACAAGTGGTTCCTGTTGTGTTCGACAAGTACGAGGAAGAATTGAAGCAGGTTGCCTCTCAGCTCAAATCTATTATGGACGCCTTCTTCCACACTCTTCACTCCAATTTTTTCAGCAAAATCCCAAGGAGGCATAGGGACCAATCCAAACAAACTTAA MSNSGAQRSFLHSIFGYGKVADMMLWKNRTESAAMLGGFSAIWLLFVVLDYHFLTLLSYLLIFLMLLLFSWNKLALFTQWSPPNAHDFEISRSTLTHFFDTFNRLLYIFFEISSGRDFKLFAMVMGGLGLLSVIGELTNSLNLIYIVFVSLQVVPVVFDKYEEELKQVASQLKSIMDAFFHTLHSNFFSKIPRRHRDQSKQT Homology
BLAST of Lag0040325 vs. NCBI nr
Match: XP_022945840.1 (reticulon-like protein B14 isoform X3 [Cucurbita moschata]) HSP 1 Score: 272.7 bits (696), Expect = 2.5e-69 Identity = 137/194 (70.62%), Postives = 161/194 (82.99%), Query Frame = 0
BLAST of Lag0040325 vs. NCBI nr
Match: XP_022968135.1 (reticulon-like protein B14 [Cucurbita maxima]) HSP 1 Score: 271.2 bits (692), Expect = 7.4e-69 Identity = 136/194 (70.10%), Postives = 160/194 (82.47%), Query Frame = 0
BLAST of Lag0040325 vs. NCBI nr
Match: XP_022150651.1 (reticulon-like protein B14 [Momordica charantia]) HSP 1 Score: 246.9 bits (629), Expect = 1.5e-61 Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 0
BLAST of Lag0040325 vs. NCBI nr
Match: KAG6573940.1 (Reticulon-like protein B14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 241.5 bits (615), Expect = 6.3e-60 Identity = 120/175 (68.57%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Lag0040325 vs. NCBI nr
Match: KAA0034583.1 (reticulon-like protein B14 [Cucumis melo var. makuwa] >TYK09135.1 reticulon-like protein B14 [Cucumis melo var. makuwa]) HSP 1 Score: 238.0 bits (606), Expect = 6.9e-59 Identity = 128/196 (65.31%), Postives = 151/196 (77.04%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy Swiss-Prot
Match: A2RVT6 (Reticulon-like protein B14 OS=Arabidopsis thaliana OX=3702 GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 129.0 bits (323), Expect = 5.9e-29 Identity = 72/194 (37.11%), Postives = 117/194 (60.31%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy Swiss-Prot
Match: Q9LJQ5 (Reticulon-like protein B9 OS=Arabidopsis thaliana OX=3702 GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.4e-24 Identity = 67/191 (35.08%), Postives = 111/191 (58.12%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.8e-24 Identity = 64/186 (34.41%), Postives = 101/186 (54.30%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23 Identity = 64/187 (34.22%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.4e-22 Identity = 64/189 (33.86%), Postives = 105/189 (55.56%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy TrEMBL
Match: A0A6J1G247 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449961 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 1.2e-69 Identity = 137/194 (70.62%), Postives = 161/194 (82.99%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy TrEMBL
Match: A0A6J1HWC4 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467461 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 3.6e-69 Identity = 136/194 (70.10%), Postives = 160/194 (82.47%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy TrEMBL
Match: A0A6J1DC54 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111018734 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 7.2e-62 Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy TrEMBL
Match: A0A5D3CCB1 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001260 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 3.4e-59 Identity = 128/196 (65.31%), Postives = 151/196 (77.04%), Query Frame = 0
BLAST of Lag0040325 vs. ExPASy TrEMBL
Match: A0A5N6RF69 (Reticulon-like protein OS=Carpinus fangiana OX=176857 GN=FH972_015839 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 4.0e-36 Identity = 88/189 (46.56%), Postives = 124/189 (65.61%), Query Frame = 0
BLAST of Lag0040325 vs. TAIR 10
Match: AT3G18260.1 (Reticulon family protein ) HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25 Identity = 67/191 (35.08%), Postives = 111/191 (58.12%), Query Frame = 0
BLAST of Lag0040325 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 ) HSP 1 Score: 111.7 bits (278), Expect = 7.0e-25 Identity = 64/186 (34.41%), Postives = 101/186 (54.30%), Query Frame = 0
BLAST of Lag0040325 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 ) HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24 Identity = 64/187 (34.22%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of Lag0040325 vs. TAIR 10
Match: AT3G61560.1 (Reticulon family protein ) HSP 1 Score: 105.9 bits (263), Expect = 3.8e-23 Identity = 64/189 (33.86%), Postives = 105/189 (55.56%), Query Frame = 0
BLAST of Lag0040325 vs. TAIR 10
Match: AT1G64090.1 (Reticulan like protein B3 ) HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22 Identity = 65/191 (34.03%), Postives = 104/191 (54.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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