Lag0040263 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040263
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Mediator of RNA polymerase II transcription subunit 25
Location	chr13: 3411963 .. 3421334 (+)
RNA-Seq Expression	Lag0040263
Synteny	Lag0040263

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACAGAGGGAAAGGAGCTACAAGTTTAGACTTCAGATTCTCCCCAAAGAACATACACTTTTCTCATCTCCATACTTGATGCCGAAGCCGAAACAAGAAAACTCTCCCAAAATGGTCAGAAAACTTAGCTGAAACAATGAAACCCAAGACTAAATGGAAAAGCGACAGAGGAACTGTACTAGAGGGATAAAGGCTGGGAGTGATCCGAGATAAGGCAGAAGGTTGATTGGAGAAGAAGCGGGAGTTGAACAAGAGGAGAGAGTATTTAGGGGGGGCTTAAGAAAAAATCACTGAGCAGAATTATAAGGACTAGTACATCAATATCATGGATTGCAAATGTCGAGGAGTGATTTCAGTAAAATTTTCAGCAGCCTATATTGTGGCATTATAGTTAGTATTATTATTATTATTTGTTTTTTGTTTTGTTTTTTTTTTTTTTAATTTCTATGAGTGTTTGGGCTAGCTTCACTCACATCGACTAATCTCATGGGACAATCGTCTGGCCTTTGTACATTTGGTTACCAAAGAAACTCGTAGTATATATATATATATATTATGAAAAGCCAACTTTCATTGAGAAAAAATGAAAAAATACAAGGGCATACAAAAAACAAGACCACAAAAGGGAGTCCAAAGAATTGAACTCGTAGGATATTAAATCCTAGTAGGTGGCTACTATGAATTGAGTCCATTCCCTCTAAGTCCTTTATTTTTCCGATGACCCTTTTTCATAGTTAATATATATTTTTTGAACAATTGATAAGCATTAATGGTCTCGCTTGTAAATATATACAATTATATTTAATTCTCGGTTCTTAACTGGTACACTTTTTTATGAAGGGAAAGTGCAGCAATGCATTAACTAACATGCCATTATCACGGCATACAGCAGGCGCTTTGCAATCAACACAATCCAAATATGTGAAAATTTGGGAGGTATGTTGCGAATGTGCATGTGTTTAGTTACATGATAGTCATTATAATGTATCCATTAAAAAGTTGAAAAGCTCTCTCTTCTAAGTTCTGAACATGTAAAATTCTCTCCTCTTTGAAGTGTGTAAATCAAGATATGAAATCTCCCTCACATCAGAAGTCTCCCACAATGCGAAGACTACATCATATTGCTTGTGCATGTGTTTTGTTTTGTTATGTTTTTGGATTTAGAAGTGTGCTGTTACAAATTTAAGGTTAAATATAAGTTACCACAGAATCAAAAGTGTGAAATCATAAATTTTGTTGAACATTTCAAAATTTATTTTGAGTTTATGATCACTTGGTCCGCAAGGGTTCAAATGTGCTTGTGCTCAATTCTTCATTACTCGGTAATATTTTTTCTGAAGACGTGGTTGATCTTTTTGTGTTAGGAATGAGGTCAGAGTAAAAATGTAAATTATGTAGGATTTTTGTTTATTCCTCGTTTCCATATTGTATAGGATTTCTTTTAGAGTTGTTATTGTTTTTCCTTTTTCTTTTTTCTTTTTTCTTTTTAAAAAAAAATTCTTTGTAGGTAGAAACTAGAGGTTTAATTTAGTGGAATGAAATTTATCTTGGCAATGCAGGGAAATCTATCTGGGCAGAGACAAGGCCAGCCTGCTTTTATTACCAGAATGGAAGTATGCTTCTGATCGTCTGCTTGATAATTTTAGTAAAAATTGATCATTATTTTCTTTGTATCATTCGCTTTACACTTCTTTTTTCTTTTAATTTTTCCTCTGGCTGAAAAAAGCATGAGCTTTTATTATAGTTATACCCTTTTGATCAGTCCAGTTATATCAATGGATTGTACATTGTAAGCTTTTGTAGTGATTAGAAAATTATCTTTCCTCATGCCATGATGTCAAGCTATCCATTGACATTTAACTGATTAAATTATTTCTGTCAGGGTTACAGGCATGCTTCAGCTTCTGATGAGTAAGTGGACCATAGTTCCGAATTTTTACTTCTCCATTCATATATTTAAAATTTTCTAGTATGTATCATTCTTTTTTAGTTGATAACAGATAAGATTTTGTAAAATTAGGAAATTTGCATTATACCATACATTCCTGAATAAACTGACATTCCTAATTCTTAACATAGCCTTTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAGAGAGAGAAAGAGTAAAAATTTCATTGATGAATGAAATACGAGGAGCTAGCCTATTTCCAGTTTGAAGTTTGTGGAAGCTTATCACTTAGGGGCAGTATTGTGGTTGGTTTGCTTCCGTTCTTGCAAATGTTTCTTCGTTGGTTAAAATTTCCAAGTTTATCACGGTGTTCTCTCTCAAGATTATTGCTGATTTTTCTAATTTTTTTTAGATTTTTCCTTATTTTCTCTTTTTTCATCCCCTTGTGGGGTTTGTATCTTTCGAGCACTAGTCTCTTTTCATTTTTTCAATGAAAAGTTTCGTTTCTGGTTAAAAAAAAAATAGAATTCTTAAATAGTTTGGCTAGATCATTTTTTGGTTGAAGATTTTTGAGCTTGCTTTGGGTCTAAAAAGTAACCTGAAAAATTAGTGTTGATATGGATTAATCAGCAGGAGAACAAAGTGTAGGAAATTGCAATTTTGTTGGACTGTCCAGTTAGCTCCTTGCCTGGTTTACTACTTGGGTGTCCCTTCGGTGGGAAATCAAAGGATTTGTGGATGCCAGCAGTGTAAATGATTTTGGGAACTTCGGGCAACCTGATAAGATGCTCTGTTAACTGTCATTTAAAGCTAGGGGATTATGCTTTCTACTGGCTGAAATTTGCCTTCAACAAGAAACATAAGCAGGAAGTTCCTATTATCTATATCTGTATCCCAAAGGATACAATAACTTGCTCTTGCTTCAATCACCTACTTAATAGAGCCTGCCAGCGGTTGAGGTTGTTGAATTATCCTTAAGTCACATCGATATCATTCACTTGCTTCATAGATCCAATGACAGATATAAACATGATTGCATGAAAACAAAAGCAAGAAGTTGTTTACCAGATACTGGTTATGGTTCACATCTGCAAAAACCTACTGCAAAAATAGGTTTCTAACTATGGAGTACAGCATTTTCTATAGCATACAAACTAAGTTGTAGTACCAAGGTTTCTTTCCCGGCTGATTTGCAAGGATTTGCCACATTTTATTTGTTGTGGTCTTGTGGGCATCTTCGACTATTATCTGTGAAATGATGTACTCACTGGGGATCAGAGGTTGATTTTGTGAGACCTCCAATTGTTCACACTCAAGCTAGGAAGGGTGAAGTTGGTAACAAAGGGTAAATTCTGTTATTGTTCTGTTGTTGTGGGGTCCATAGGATTGTGGGATAGCATGAACGCGAAGGTGAGGTTGCTTTTGTAGGGGAGTCTGGGTTTCAGTGTGAGTACAGATGTTTTTGGGTATACAAGAGTGTCTAGAGGAGAGAACCAGATCTCTCGAAAAGTTGGGTGTTCTTGTGTTTTTCCCTACTAGTTATCAATATCATATGCTAAATAACCCACTGTCAATTGAAGAACTATTAATTGAACAGTGTGGGTTTGTCTCTCTGCTGTGTTGTGTTTTTTAGTGTTTCTTGCAGGAAATTCTTAGTTGAATACCTAACAGATTTTTCCATGAATGTCCCATAAATCCTGTAGGCTGTAGCCATACTGCCTTTTCCCTTCTAACACAGCCCCTTGGCCCAAACTCTTTTGTTCTCTTCTTCAGTTGTCAATGATGTTTGATTGGTTGTTGCTGTTTTCTTCACTGGTAATGTGGGTACGATAGCAGCATTTGTTTTTTTTTTTTTTTTTTTGAAAAACGATGGCAGCATTTCTTTAGTCAACACTTCTTCACTTTGAGCTCCTGTGTGCGTCATTGATGGTCGGACAATCTACATTGAAAACGCGTTTGGTTGGTGATCTGAAAACAGAAATTTGAAAACAAGAGATTCAATGAAAACAAACTTGTATTTCATGTTCTTAGATTTGTGTTTGGCAGTAGATTTATAAATTGGATTCCTTTTTAAACAATTGTTCAAAATGTGTTTGATAATATATTTATAAACCATAGTTGTAGTTATCAACTATATATTAAGTTGAATATAAACTATTATTAATTAATTTATAAACATGTTATATGTTATAATTTTTTTATAATTATTATTTTACAATATCATATAATTTATGATACATTATATTATACATATGTTAATATGTTAATTTAATAAAAATGAATTGAGTTTATAACATGAAATACTATATTTATTAAAAATTTTATCTTTTTTAATTTAATTTTGCATTTTAAAATTTCAAATTCAAAATAACATAAAAAAGTTTGTCTTTCAGAATTTCCACTATTTGGATCACAAAATTCGAAAACAATTTTAAAAAACACATCTGCGAATGGTATATTCACTAAATTCAGTGAATCCAAAAACATAAAATAAAATCCGGATTGCCTACCAAATAGGCAGATTCTTACCATAATAAAGAAGGGGCCAGAGGAATCTGTTGTGTTGGTGAATTTTGAATTCTCATGAATTTCTTTGTTCACTAACGTTTTGGATTTTGTTGGTCACACTGATAAAGTCTCCCAATATTGTTTTTAACGTCATCTCATTCAAATTATAGAAATTTACGATCCATTTCTACATACTTTTAGTTTTTGCCTCCCTCCCTCTTGATATTTAGTTGACTTTCCCTACTTTACACATTTAAATATGTGGATCAGTTCAATTTTTTTGTTGGGGGTGGAATCATATATCTATCTTCTATATTTATAGGCTTGCAGCAAACTGGCCACAGACAATGCTAATAGTTCGGCTTATCTCACAAGATCGCGTTAATAACAAGTAATTTGTTGCTCGGTGGGATAATAGTAGTTTTTCTTGTCTTCTTTCAGCTTAATTAAAACCAGCTCAAGTTTTGTTGTATTTGATTTTAGGCAATATGCTGGAAAAGCTGATTTTCTTGTTTTCCGAGCTTTGAATCAGCACGGGTTTCTTGGCCAGCTTCAAGAAAAGAAACTTGTAAGTTGTCTACATTTGTGCTAGTCCTTTTGACCATTGAATAGGTTGATGTGCTTTCTTTTAGTTAAAATGTTGGGATTCATGGTTTCTGCTCTGTATATAACCATATATGCATTACTGTTCAAATCTCCTTAGATTATTATTTTTGGTAAATGAAACCTGCTGTGTTAACAAACAAAAGAGTAACAGAACAACCTAAGGGCTGGGGAAAGGGAGCTTCCTCACCCAACAAGACAGCTAGAGACAAAAAGCCTTCCAGTCAAGGAGGATCAATGAGAGAGGGTAATTACAAAAAAGATTACTATAGCTATGACACCACCAACTTACATTAATCTATTCAAAATCCCAAAAAATATCAGAAGAACAAGCCTTTTCTTAAAAAATCCTCTTGTTTCGCTCCAGCCAAAGGTTCCATAAAAGGGTTCTAGAGGCAAAATTCCAAAGGATCCTAGTTTCTCCTTTTAACTTCCAACTGCCCAAAGCCTCAAACAACCACCCATCCACCTTCCTAGGGAGACATTTGAAGATCAGAAAGGCTAACTAATTGTCCCATCACTACTTAGCAAAGGAACAATGCAAGAAAATGTGATCCAACTATTTATCACTGGCCAAACAAAGAGAACAAATTGAAGGGCGTGGGGGCATAACTTGGACACTTCTTTTGCAACTTCTCTTGGGTATTCAAACTTCCGTAAGCCACTGACCATAAGAAGACAAATCAGCTTAATTAACTTGCAATTTAAAATGGGTCTAACTGCTGCCAAATTTAGAAACAGCGACTTGGTGGAAAAAGCTCCTGAAGGGTCCAAAGTCCAAGTGATTTTGTCCTCTTCTTGACCCAAAAGAAAACCTCCCAACTTCAGAGTCGGCCCAATCCAGGCCTGCAACTCTTTATAAAAAATCCCTCCTCTTATGCCCATATCCCAAGTCCCAGCATCCTTCTTCAGAGAGAGATTGAAAATTTCTGGAAACTCAACTTGAAAAGAAAATTCCCAACCAAATATCTATCCAAAAGTTGGTCCTTTGCCCATTTCTAGCTTTGGATCTTATGAACTTGTCATAAAGGGGCGCTGTTTTCCTCTTCACAATATCAAACCAAGGTCTATTTTTGGAGCAACCTTTAGGATGAGAAGCCATCCACCCGGGGGGTTCCTCTCCATAAATGCTAGCTTCCACCTCCCTCCATTAAGCTTTTTTTTTTCTCCCCATCGGGAACTGCCAATGCCATTTTGTAAGAAGAGCTAAGTTTTTGTGCTTCAAGGCCCCAATATCGGAATCTCCTTGGTATAGAGAAAGGGAGGCAGTTTTCCAGTTCACAAGGTGACTGCCAGCTTTATAATCTCCATAGCCCCAAAAGAAATCTCTAATTAGCTTTTCCATGCTAATTATAACCTCCATTGGCGCTTTGAGAAGGGAAAAAAAGTAAAGAGGCCGCCCATTAAGGACCAAATTGATAAGAGATAACCAAACTCCCTTGGACAATAGGGATTTTTCCATTTTGCTATTTTACTCCTGAACTTGTCTACCATAGGCTCCCAAAAAAAGGCACTACGATACTTACCTCGAAGGGAAACCTAGGTAGTTGATAATGGACTTATCGAGGGTCCAATCAAATTACATTTATAGTCCCGTTCCTAAGCTACTTTTGCAGCAGTAGTGGCCATGTTGAACTCAGGGAGCGAAGGTAATTAAATCAACTGATTTTGGATTTCTCTAATGTAACCCGGAGGGGGGGGGGGTTGGAGATTATTGCTCAAGATATAAACTCCAAAAAGGAGTGAAAACAAAACTAAAATGAAAGAAAAGAGATAGCAAGAAACAATTACAATATAATTAATAAAAGCATGCCAATTAAAACAAATATCCTGTAAAGAGAAGCCCCAAGAGACTTAGCAAGAGTGCACCAGGAAGAATCCTTTAAACAAATTGCAAGGATTGCGAAAATTTAAAGACAAGAAAATTAAATGAGGAATAGCTGATCTCATCTTGGGATCGTGCAATTCGGAAGATCGGATTTTGCGAATCCCAAAGCAATCCCCAGTTTAAAACCATCGTGATTTTTGGTTCCTTTGGATTACTAATTTGCATTTCACATGTGAACCGACATCAAACTTTATTTCTCTAGTGATTTCTGCTGTTGAGCCACTTGTTTTGTTTCAGTGTGCAGTCATCCAGTTGCCATCCCAGACTTTACTACTATCTATTTTTGAAAAAGCTTACCGCTTGATAGGGACGCTTTTTCCTGGGGTAAGATATTTTTGAGCTACAAAGATTAGTTTGTATTGTTTTGTTGTTGTTGTTGTTTTCCTAAGTAAATGGTGAGAATCCTTCATTTTGAGGTCAATACATTACCAGATGTTTGTTGTTGTTGTTTTCCTTATGCCTTAAGTAAATGGCGAGAATCCTTCATTTTGAGGTCAATACATTACCAGATGTTCGTTGAGAAGAATGATTCAATATTTGGCTACAACTTTGACATCTACTTTTGTCTTTTCTAATCATCTATATTAAACCGAAAGAGACAAAATGAATTCTTTCCACCCTCTCTCCTCCAGCCTTAGCCAACCAGGCTTCCCCCATGACCTCTAACTCCAACCACCATGGATACCAGAACCACCTCCATGGACCTATTCCAAGTGATCCATCTCCATTGCATGCAAGATATTTTCCATTGATTTAATGACACCAATTTTTGAGGGAACAGAGAAGATGCATGCTTCAATGGTTTAAAGAAGGTGATAAAATACAAAGTTCTTCCATCGTATTTTGGCTGCACGAAAGAGGAAGAATTCTATTTTTGAATTACTTTCTCGGGAAGGATGGAGTTAGTTTAATAACAACACATGATATTGAACAATGGCTCTTAGATTTTTATCAGAGGCTATACACCAAAGACATTAATACAGGGTTTGTCCCAAAAAATCTTGATTGCTGTCCGGTTAATGAGACTTAGGTGCCTGCTTTGGAAAGTGCTTTTACTAAAAAGAGGAAGTTCTTCTTGCGGTCAACTTGTTGGGCACAAAGTAAGTCTCTTGGGCTGGATGGTTTTGTTGCTGAATTTTTTAAGAATTGTTGGAATACTATCAAGTAGGATGTTATGGCCATGTTTAATGAATTTTTTGACAATGGGATTATTAATGTGGTATTGAACTAGACCGATTAGCCTTATTCCTTATGCCTACAAGACTATTGCTAGAGTATTGTCTAACTGTTTCAAGCATGTTCTTCCATCTATTATAGCTGAAAATCTGATTGCCAAATTTTGGATGTCTTCTTGGTGGCCAATGAATTGATTGATGATTGGAACTCCTCTGACAAGGGAGTGGTTTTTTGAACAAAAAACGAAACTTTTCATTGATATAATGAAATGGTCAAGCTTTTCTAACAAGGGAGTGATTATTCAGTTGGATTTAGAAAAGACCTTTGATAAAGTTGATTGGTATTTTCTAGATGTTGTTCTGAAGGCAAAGGGTTTAGGTATCTTATGGTAATGATGGATTCATGGTTGTATCTCTAGTGCTAACTATTCAATCATTATTAATGGGAGGCCTAGGGGACGCCTAGGGGTAAAATTATTCCATCAATGGGCATTCAACAAGGTGATTTGCTCTCTCCTTTTCTCTTCATTCTGGTCTTTGATTGCTTCGGTCGTCTTTTTTTTTTCAGGGTCATCGTTGGGGTAAAAATTAAAATTATATCACATTCTATTGGTACATCTTTTTGTTTAACTCATCTACCATTTGTGGATGATACATTACTATTCTCTACTTTGGATTCTACTTTGGATTCTATCCTTTTGGAATAATGATCATAATTACTGGGATCTTAGAATGGGGAGGAACTTGAAAGATGTTGAATCATACGAATGGGCAAGTCTTACCTCGATTCTCGACCCCATTGTTCTCACTCAATCAGAGGATGTATGGAATTGGCCTCTCAATCCCAACGGACAGTTCTCTGTGAGATCTCTTTTAGCTAATATGGGAGATAGACCATGGTTAATCGATCCCTTTCTTTCCAAGGCCATATGGAAGGACAATTACCCAAAGAAAATAAAATTCTTCTTATGGGAACTCGCTCACAAGGCCATTAGTACCAAAGAGATTCTCCAGAGACGCATGCCCTTTGCAGCTTTATCTCTAGGATGGTGTTCTCTCTGCAAAGCTGAAGATGAATCTCAAGATCACATTTTTATCCACTGTCCATTTGCTCAACATTTCTGGAACAAAATTTTCATCTCTTTTGGATGGTATTTGGCTTCTCCTGGGAATATCAAAGAATATCTTTGCACTATCTTTCTGGGGCATCCTTTCAAGAACAAGAAGTCCATTCTTTGGCTGAATATATCTAGGGCTTTTTTTTGGATTCTTTGA

mRNA sequence

ATGGGACAGAGGGAAAGGAGCTACAAGTTTAGACTTCAGATTCTCCCCAAAGAACATACACTTTTCTCATCTCCATACTTGATGCCGAAGCCGAAACAAGAAAACTCTCCCAAAATGGGAAAGTGCAGCAATGCATTAACTAACATGCCATTATCACGGCATACAGCAGGCGCTTTGCAATCAACACAATCCAAATATGTGAAAATTTGGGAGGGAAATCTATCTGGGCAGAGACAAGGCCAGCCTGCTTTTATTACCAGAATGGAAGGTTACAGGCATGCTTCAGCTTCTGATGAGCTTGCAGCAAACTGGCCACAGACAATGCTAATAGTTCGGCTTATCTCACAAGATCGCGTTAATAACAAGCAATATGCTGGAAAAGCTGATTTTCTTGTTTTCCGAGCTTTGAATCAGCACGGGTTTCTTGGCCAGCTTCAAGAAAAGAAACTTTGTGCAGTCATCCAGTTGCCATCCCAGACTTTACTACTATCTATTTTTGAAAAAGCTTACCGCTTGATAGGGACGCTTTTTCCTGGGGTCAATACATTACCAGATGTTTGTTGTTGTTGTTTTCCTTATGCCTTAAGTAAATGGCGAGAATCCTTCATTTTGAGAATGGGGAGGAACTTGAAAGATGTTGAATCATACGAATGGGCAAGTCTTACCTCGATTCTCGACCCCATTGTTCTCACTCAATCAGAGGATGTATGGAATTGGCCTCTCAATCCCAACGGACAGTTCTCTGTGAGATCTCTTTTAGCTAATATGGGAGATAGACCATGGTTAATCGATCCCTTTCTTTCCAAGGCCATATGGAAGGACAATTACCCAAAGAAAATAAAATTCTTCTTATGGGAACTCGCTCACAAGGCCATTAGTACCAAAGAGATTCTCCAGAGACGCATGCCCTTTGCAGCTTTATCTCTAGGATGGTGTTCTCTCTGCAAAGCTGAAGATGAATCTCAAGATCACATTTTTATCCACTGTCCATTTGCTCAACATTTCTGGAACAAAATTTTCATCTCTTTTGGATGGTATTTGGCTTCTCCTGGGAATATCAAAGAATATCTTTGCACTATCTTTCTGGGGCATCCTTTCAAGAACAAGAAGTCCATTCTTTGGCTGAATATATCTAGGGCTTTTTTTTGGATTCTTTGA

Coding sequence (CDS)

ATGGGACAGAGGGAAAGGAGCTACAAGTTTAGACTTCAGATTCTCCCCAAAGAACATACACTTTTCTCATCTCCATACTTGATGCCGAAGCCGAAACAAGAAAACTCTCCCAAAATGGGAAAGTGCAGCAATGCATTAACTAACATGCCATTATCACGGCATACAGCAGGCGCTTTGCAATCAACACAATCCAAATATGTGAAAATTTGGGAGGGAAATCTATCTGGGCAGAGACAAGGCCAGCCTGCTTTTATTACCAGAATGGAAGGTTACAGGCATGCTTCAGCTTCTGATGAGCTTGCAGCAAACTGGCCACAGACAATGCTAATAGTTCGGCTTATCTCACAAGATCGCGTTAATAACAAGCAATATGCTGGAAAAGCTGATTTTCTTGTTTTCCGAGCTTTGAATCAGCACGGGTTTCTTGGCCAGCTTCAAGAAAAGAAACTTTGTGCAGTCATCCAGTTGCCATCCCAGACTTTACTACTATCTATTTTTGAAAAAGCTTACCGCTTGATAGGGACGCTTTTTCCTGGGGTCAATACATTACCAGATGTTTGTTGTTGTTGTTTTCCTTATGCCTTAAGTAAATGGCGAGAATCCTTCATTTTGAGAATGGGGAGGAACTTGAAAGATGTTGAATCATACGAATGGGCAAGTCTTACCTCGATTCTCGACCCCATTGTTCTCACTCAATCAGAGGATGTATGGAATTGGCCTCTCAATCCCAACGGACAGTTCTCTGTGAGATCTCTTTTAGCTAATATGGGAGATAGACCATGGTTAATCGATCCCTTTCTTTCCAAGGCCATATGGAAGGACAATTACCCAAAGAAAATAAAATTCTTCTTATGGGAACTCGCTCACAAGGCCATTAGTACCAAAGAGATTCTCCAGAGACGCATGCCCTTTGCAGCTTTATCTCTAGGATGGTGTTCTCTCTGCAAAGCTGAAGATGAATCTCAAGATCACATTTTTATCCACTGTCCATTTGCTCAACATTTCTGGAACAAAATTTTCATCTCTTTTGGATGGTATTTGGCTTCTCCTGGGAATATCAAAGAATATCTTTGCACTATCTTTCTGGGGCATCCTTTCAAGAACAAGAAGTCCATTCTTTGGCTGAATATATCTAGGGCTTTTTTTTGGATTCTTTGA

Protein sequence

MGQRERSYKFRLQILPKEHTLFSSPYLMPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITRMEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPGVNTLPDVCCCCFPYALSKWRESFILRMGRNLKDVESYEWASLTSILDPIVLTQSEDVWNWPLNPNGQFSVRSLLANMGDRPWLIDPFLSKAIWKDNYPKKIKFFLWELAHKAISTKEILQRRMPFAALSLGWCSLCKAEDESQDHIFIHCPFAQHFWNKIFISFGWYLASPGNIKEYLCTIFLGHPFKNKKSILWLNISRAFFWIL

Homology

[Close]

BLAST of Lag0040263 vs. NCBI nr
Match: XP_022150501.1 (mediator of RNA polymerase II transcription subunit 25 [Momordica charantia])

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-60
Identity = 121/152 (79.61%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 526 MPQQVQAGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 585

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQTM IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 586 MEGYRSASASDKLAANWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 645

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 646 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 677

[Close]

BLAST of Lag0040263 vs. NCBI nr
Match: KAG6573988.1 (Mediator of RNA polymerase II transcription subunit 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-60
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 524 MPQQVQNGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 583

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQ M IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 584 MEGYRSASASDKLAANWPQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 643

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 644 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 675

[Close]

BLAST of Lag0040263 vs. NCBI nr
Match: XP_023541647.1 (mediator of RNA polymerase II transcription subunit 25-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-60
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 524 MPQQVQNGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 583

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQ M IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 584 MEGYRSASASDKLAANWPQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 643

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 644 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 675

[Close]

BLAST of Lag0040263 vs. NCBI nr
Match: XP_022945397.1 (mediator of RNA polymerase II transcription subunit 25-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-60
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 524 MPQQVQNGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 583

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQ M IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 584 MEGYRSASASDKLAANWPQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 643

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 644 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 675

[Close]

BLAST of Lag0040263 vs. NCBI nr
Match: XP_022945396.1 (mediator of RNA polymerase II transcription subunit 25-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-60
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 482 MPQQVQNGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 541

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQ M IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 542 MEGYRSASASDKLAANWPQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 601

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 602 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 633

[Close]

BLAST of Lag0040263 vs. ExPASy Swiss-Prot
Match: Q7XYY2 (Mediator of RNA polymerase II transcription subunit 25 OS=Arabidopsis thaliana OX=3702 GN=MED25 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.7e-56
Identity = 110/158 (69.62%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 27  LMPKP-----KQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQ 86
           +MP P      Q    ++G  +++  NM LS+ ++GA+Q++QSKYVK+WEGNLSGQRQGQ
Sbjct: 512 MMPTPGVGQQAQSGIQQLGGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQGQ 571

Query: 87  PAFITRMEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGF 146
           P  ITR+EGYR ASASD LAANWP TM IVRLISQD +NNKQY GKADFLVFRA++QHGF
Sbjct: 572 PVLITRLEGYRSASASDSLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGF 631

Query: 147 LGQLQEKKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           LGQLQ+KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 632 LGQLQDKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 669

[Close]

BLAST of Lag0040263 vs. ExPASy Swiss-Prot
Match: A0A3Q7JC00 (Mediator of RNA polymerase II transcription subunit 25 OS=Solanum lycopersicum OX=4081 GN=MED25 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.2e-56
Identity = 115/158 (72.78%), Postives = 128/158 (81.01%), Query Frame = 0


Query: 27  LMPKP--KQENSPKMGK--CSNALTNMPLS-RHTAGALQSTQSKYVKIWEGNLSGQRQGQ 86
           +MP P   Q+  P M     ++   NMPLS + T+GAL S QSKYVK+WEGNLSGQRQGQ
Sbjct: 495 MMPTPGMSQQGQPGMQPVGVNSTSANMPLSQQQTSGALPSAQSKYVKVWEGNLSGQRQGQ 554

Query: 87  PAFITRMEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGF 146
           P FITR+EGYR ASAS+ LAANWP TM IVRLISQD +NNKQY GKADFLVFRA+NQHGF
Sbjct: 555 PVFITRLEGYRSASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGF 614

Query: 147 LGQLQEKKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           L QLQEKKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 615 LSQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 652

[Close]

BLAST of Lag0040263 vs. ExPASy TrEMBL
Match: A0A6J1DBP2 (Mediator of RNA polymerase II transcription subunit 25 OS=Momordica charantia OX=3673 GN=LOC111018638 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.8e-61
Identity = 121/152 (79.61%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 526 MPQQVQAGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 585

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQTM IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 586 MEGYRSASASDKLAANWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 645

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 646 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 677

[Close]

BLAST of Lag0040263 vs. ExPASy TrEMBL
Match: A0A6J1HZ64 (Mediator of RNA polymerase II transcription subunit 25 OS=Cucurbita maxima OX=3661 GN=LOC111467555 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-60
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 482 MPQQVQNGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 541

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQ M IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 542 MEGYRSASASDKLAANWPQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 601

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 602 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 633

[Close]

BLAST of Lag0040263 vs. ExPASy TrEMBL
Match: A0A6J1HWR7 (Mediator of RNA polymerase II transcription subunit 25 OS=Cucurbita maxima OX=3661 GN=LOC111467555 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-60
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 524 MPQQVQNGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 583

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQ M IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 584 MEGYRSASASDKLAANWPQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 643

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 644 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 675

[Close]

BLAST of Lag0040263 vs. ExPASy TrEMBL
Match: A0A6J1HXI9 (Mediator of RNA polymerase II transcription subunit 25 OS=Cucurbita maxima OX=3661 GN=LOC111467555 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-60
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 524 MPQQVQNGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 583

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQ M IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 584 MEGYRSASASDKLAANWPQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 643

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 644 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 675

[Close]

BLAST of Lag0040263 vs. ExPASy TrEMBL
Match: A0A6J1HT56 (Mediator of RNA polymerase II transcription subunit 25 OS=Cucurbita maxima OX=3661 GN=LOC111467555 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-60
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 28  MPKPKQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQPAFITR 87
           MP+  Q     +G  +NA  NMPLS+HTAGALQ  QSKYVK WEGNLSGQRQGQP FITR
Sbjct: 524 MPQQVQNGMHSLGVSNNAAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITR 583

Query: 88  MEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGFLGQLQE 147
           MEGYR ASASD+LAANWPQ M IVRLISQD +NNKQY GKADFLVFRA+NQHGFLGQLQE
Sbjct: 584 MEGYRSASASDKLAANWPQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 643

Query: 148 KKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 644 KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 675

[Close]

BLAST of Lag0040263 vs. TAIR 10
Match: AT1G25540.1 (phytochrome and flowering time regulatory protein (PFT1) )

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-57
Identity = 110/158 (69.62%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 27  LMPKP-----KQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQ 86
           +MP P      Q    ++G  +++  NM LS+ ++GA+Q++QSKYVK+WEGNLSGQRQGQ
Sbjct: 512 MMPTPGVGQQAQSGIQQLGGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQGQ 571

Query: 87  PAFITRMEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGF 146
           P  ITR+EGYR ASASD LAANWP TM IVRLISQD +NNKQY GKADFLVFRA++QHGF
Sbjct: 572 PVLITRLEGYRSASASDSLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGF 631

Query: 147 LGQLQEKKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           LGQLQ+KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 632 LGQLQDKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 669

[Close]

BLAST of Lag0040263 vs. TAIR 10
Match: AT1G25540.2 (phytochrome and flowering time regulatory protein (PFT1) )

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-57
Identity = 110/158 (69.62%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 27  LMPKP-----KQENSPKMGKCSNALTNMPLSRHTAGALQSTQSKYVKIWEGNLSGQRQGQ 86
           +MP P      Q    ++G  +++  NM LS+ ++GA+Q++QSKYVK+WEGNLSGQRQGQ
Sbjct: 403 MMPTPGVGQQAQSGIQQLGGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQGQ 462

Query: 87  PAFITRMEGYRHASASDELAANWPQTMLIVRLISQDRVNNKQYAGKADFLVFRALNQHGF 146
           P  ITR+EGYR ASASD LAANWP TM IVRLISQD +NNKQY GKADFLVFRA++QHGF
Sbjct: 463 PVLITRLEGYRSASASDSLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGF 522

Query: 147 LGQLQEKKLCAVIQLPSQTLLLSIFEKAYRLIGTLFPG 180
           LGQLQ+KKLCAVIQLPSQTLLLS+ +KA RLIG LFPG
Sbjct: 523 LGQLQDKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPG 560

[Close]

BLAST of Lag0040263 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-06
Identity = 26/66 (39.39%), Postives = 35/66 (53.03%), Query Frame = 0


Query: 271 IWKDNYPKKIKFFLWELAHKAISTKEILQRRMPFAALSLGWCSLCKAEDESQDHIFIHCP 330
           IWK     KIK FLW+L   A++T + L+RR      +   C  C  EDE+  H+F  C 
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRR---HIRNHPQCHRCCQEDETSQHLFFDCF 77

Query: 331 FAQHFW 337
           +AQ  W
Sbjct: 78  YAQQVW 80

The following BLAST results are available for this feature:

BLAST of Lag0040263 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150501.1	1.4e-60	79.61	mediator of RNA polymerase II transcription subunit 25 [Momordica charantia]	[more]
KAG6573988.1	5.4e-60	78.95	Mediator of RNA polymerase II transcription subunit 25, partial [Cucurbita argyr...	[more]
XP_023541647.1	5.4e-60	78.95	mediator of RNA polymerase II transcription subunit 25-like isoform X1 [Cucurbit...	[more]
XP_022945397.1	5.4e-60	78.95	mediator of RNA polymerase II transcription subunit 25-like isoform X3 [Cucurbit...	[more]
XP_022945396.1	5.4e-60	78.95	mediator of RNA polymerase II transcription subunit 25-like isoform X2 [Cucurbit...	[more]

BLAST of Lag0040263 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XYY2	1.7e-56	69.62	Mediator of RNA polymerase II transcription subunit 25 OS=Arabidopsis thaliana O...	[more]
A0A3Q7JC00	2.2e-56	72.78	Mediator of RNA polymerase II transcription subunit 25 OS=Solanum lycopersicum O...	[more]

BLAST of Lag0040263 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBP2	6.8e-61	79.61	Mediator of RNA polymerase II transcription subunit 25 OS=Momordica charantia OX...	[more]
A0A6J1HZ64	2.6e-60	78.95	Mediator of RNA polymerase II transcription subunit 25 OS=Cucurbita maxima OX=36...	[more]
A0A6J1HWR7	2.6e-60	78.95	Mediator of RNA polymerase II transcription subunit 25 OS=Cucurbita maxima OX=36...	[more]
A0A6J1HXI9	2.6e-60	78.95	Mediator of RNA polymerase II transcription subunit 25 OS=Cucurbita maxima OX=36...	[more]
A0A6J1HT56	2.6e-60	78.95	Mediator of RNA polymerase II transcription subunit 25 OS=Cucurbita maxima OX=36...	[more]

BLAST of Lag0040263 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25540.1	1.2e-57	69.62	phytochrome and flowering time regulatory protein (PFT1)	[more]
AT1G25540.2	1.2e-57	69.62	phytochrome and flowering time regulatory protein (PFT1)	[more]
AT3G25270.1	4.7e-06	39.39	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 266..336 e-value: 2.2E-16 score: 60.3
None	No IPR available	PANTHER	PTHR12433:SF18	BNACNNG04590D PROTEIN	coord: 38..179
IPR045105	Med25/PTOV1	PANTHER	PTHR12433	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25	coord: 38..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040263.1	Lag0040263.1	mRNA