Lag0040166 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040166
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	H4/H2A histone acetyltransferase complex
Location	chr13: 2624609 .. 2626341 (-)
RNA-Seq Expression	Lag0040166
Synteny	Lag0040166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGCGGCGGCAAAGGCAGAGAGGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCGCCACCGTCCTCCGCTTCTTCTCTTCCCAAGGTTTCTCTCTCTCTCTCTCTCCAGACATTTTCTTGTAACCGCCGGAATTTGATTTTGTTCTTGTTTTTGATACGTTGTGGTTAGGACCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTAGTCAAACTACAAGGCAAGTTTGCCTTTACATTATGCTATCTGGTTTCTAATTGTCTCCAATATCGATACTTGAGTGCTCAGCATCATCGTTGCTGAATCCATTATTTTAATTAGTTAGTGAGAATTTAACCTGTTTCCTATTTGTGTATTCAGTGATAACGATCAACTTCGTTACTGTTATTATTATTTTGTGTTGTCTGATGAAACTTGGTATGGAGGACCAGAAATTAAGAATGCAGTCATTCTTACGGATTTGAGAAATGACTGGAAGAGTAATAAGCGGAAATTAAATTTATCTTCCCGGAATGTCATTTTGTTTATTTCTTGAGGATTCTACCGATTAAGAATAGGGGGAAATCTTAGGAACTGAATATTCTATGGTCAATAAAATCACATTATCTTATACCACTATCGAGAACTTAAGCAGTCATCTCGTCATTCTGGGGTAATCATTCTTAGAATCGCAAGGAAAGGAAACAAACTTTGATGTATTTGCTCATGATTTTAAATGATTGATCTCGTTTATCGGCATTTTCTCCCCCCTTCTATATACGAGCTTGCTGTCAAAGAATTATTATTAAATTTTATTTTATACTGTTCAACTTGCCTTCTACATGCTGGTTCAAGTTGATGCAAGTATGTAATCATATACAGCTCACGCTCTAACAATTGTTAGTTGCATTATTTTTCATACAGGCATACATCGCCATTTTGTCATCTTCGGGTTGATGGAATTTCTGCGAAGAAGGTTTTCTCTTCCCCTGTATCATCTTGTTTTGTATATTTTACTGAGCTTCAACGATATTCTGTCGTATAATACTCTATTGGTTTACTATCTTCTTGTTGCAGCTTTGATCGTCAGTTCTCTTCTGATGAGATTCTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGGTAAAAAGAAATCACTAATGCCCATTTTTCTTTTTCCTGTTTTTTTTTTCTTCTGGCTTCATTTTATTTGAAAAGGTGAATAATTTAAATAGCATAAATATATATAAGCTAGAAAATTCACTTTTCTTGCATTCAAGCTTTTTGAAAGAAAAATTTACCGATTCCTTATAATCATATTCATCATTATGGAAGGCTTTGGGTACCTACTATAAGTAGAGCTCTGCATTCACATCTGACCTGATAGAGATCATATTAACTTTCTTTCTAAAGAAGATCTCGGTTACAGCTTGATTATCAAATATGTTTTGAAGTTTTAGACGTTGACATATATAAATATGCTTTTTTGAAGAGTTATAATTAAATAACATGGGGGTGAGTCTCATTTATTTTTTACTCCTTAAGTCATCTTTTCTGGTCTTCCTTTTGACAACTGATGAGATATTTGTGCTAATATTGCTTTCCTCGCCCTCACACTGTATTTCAGAAGCCAGATGATGAGGAGATGGAAATACTGAATCACGAGGAAGATTTTTGCTTACCACAAACCTTCTTTGTCAAAGAAGAATCTTAA

mRNA sequence

ATGGAGAGCGGCGGCAAAGGCAGAGAGGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCGCCACCGTCCTCCGCTTCTTCTCTTCCCAAGGACCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTAGTCAAACTACAAGGCAATGATAACGATCAACTTCGTTACTGTTATTATTATTTTGTGTTGTCTGATGAAACTTGGTATGGAGGACCAGAAATTAAGAATGCAGTCATTCTTACGGATTTGAGAAATGACTGGAAGAGCATACATCGCCATTTTGTCATCTTCGGGTTGATGGAATTTCTGCGAAGAAGCTTTGATCGTCAGTTCTCTTCTGATGAGATTCTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGAAGCCAGATGATGAGGAGATGGAAATACTGAATCACGAGGAAGATTTTTGCTTACCACAAACCTTCTTTGTCAAAGAAGAATCTTAA

Coding sequence (CDS)

ATGGAGAGCGGCGGCAAAGGCAGAGAGGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCGCCACCGTCCTCCGCTTCTTCTCTTCCCAAGGACCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTAGTCAAACTACAAGGCAATGATAACGATCAACTTCGTTACTGTTATTATTATTTTGTGTTGTCTGATGAAACTTGGTATGGAGGACCAGAAATTAAGAATGCAGTCATTCTTACGGATTTGAGAAATGACTGGAAGAGCATACATCGCCATTTTGTCATCTTCGGGTTGATGGAATTTCTGCGAAGAAGCTTTGATCGTCAGTTCTCTTCTGATGAGATTCTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGAAGCCAGATGATGAGGAGATGGAAATACTGAATCACGAGGAAGATTTTTGCTTACCACAAACCTTCTTTGTCAAAGAAGAATCTTAA

Protein sequence

MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKDQPQIELELKLLQALEIYPLVKLQGNDNDQLRYCYYYFVLSDETWYGGPEIKNAVILTDLRNDWKSIHRHFVIFGLMEFLRRSFDRQFSSDEILQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

Homology

[Close]

BLAST of Lag0040166 vs. NCBI nr
Match: XP_038893367.1 (uncharacterized protein LOC120082183 [Benincasa hispida])

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-55
Identity = 123/167 (73.65%), Postives = 126/167 (75.45%), Query Frame = 0


Query: 1   MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKDQPQIELELKLLQALEIYPLVKLQGND 60
           MESGGKGREEEQDGMSVHSPCKAPPSSASSLPK+QPQIELELKLLQALEIYPLVKLQG  
Sbjct: 1   MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQG-- 60

Query: 61  NDQLRYCYYYFVLSDETWYGGPEIKNAVILTDLRNDWKSIHRHFVIFGLMEFLRRSFDRQ 120
                                                  IHRHFV+FGLMEFLRRSFDRQ
Sbjct: 61  ---------------------------------------IHRHFVLFGLMEFLRRSFDRQ 120

Query: 121 FSSDEILQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 168
           FSSDE+LQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Sbjct: 121 FSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 126

[Close]

BLAST of Lag0040166 vs. NCBI nr
Match: XP_008446430.1 (PREDICTED: uncharacterized protein LOC103489178 [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 3.8e-55
Identity = 122/167 (73.05%), Postives = 126/167 (75.45%), Query Frame = 0


Query: 1   MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKDQPQIELELKLLQALEIYPLVKLQGND 60
           MESGGKGREEEQDG+SVHSPCKAPPSSASSLPK+QPQIELELKLLQALEIYPLVKLQG  
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQG-- 60

Query: 61  NDQLRYCYYYFVLSDETWYGGPEIKNAVILTDLRNDWKSIHRHFVIFGLMEFLRRSFDRQ 120
                                                  IHRHFV+FGLMEFLRRSFDRQ
Sbjct: 61  ---------------------------------------IHRHFVLFGLMEFLRRSFDRQ 120

Query: 121 FSSDEILQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 168
           FSSDE+LQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Sbjct: 121 FSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 126

[Close]

BLAST of Lag0040166 vs. NCBI nr
Match: XP_004135149.1 (uncharacterized protein LOC101212766 isoform X2 [Cucumis sativus] >KGN51973.1 hypothetical protein Csa_008415 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 1.5e-54
Identity = 121/167 (72.46%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 1   MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKDQPQIELELKLLQALEIYPLVKLQGND 60
           MESGGKGREEEQDG+SVHSPCKAPPSSASSLPK+ PQIELELKLLQALEIYPLVKLQG  
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEHPQIELELKLLQALEIYPLVKLQG-- 60

Query: 61  NDQLRYCYYYFVLSDETWYGGPEIKNAVILTDLRNDWKSIHRHFVIFGLMEFLRRSFDRQ 120
                                                  IHRHFV+FGLMEFLRRSFDRQ
Sbjct: 61  ---------------------------------------IHRHFVLFGLMEFLRRSFDRQ 120

Query: 121 FSSDEILQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 168
           FSSDE+LQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Sbjct: 121 FSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 126

[Close]

BLAST of Lag0040166 vs. NCBI nr
Match: XP_022945110.1 (uncharacterized protein LOC111449449 [Cucurbita moschata] >XP_023541772.1 uncharacterized protein LOC111801826 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.5e-54
Identity = 121/167 (72.46%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 1   MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKDQPQIELELKLLQALEIYPLVKLQGND 60
           MESGGKGR+EEQDGMSVHSPCKAPPSSASSLPK+Q QIELELKLLQALEIYPLVKLQG  
Sbjct: 1   MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPLVKLQG-- 60

Query: 61  NDQLRYCYYYFVLSDETWYGGPEIKNAVILTDLRNDWKSIHRHFVIFGLMEFLRRSFDRQ 120
                                                  IHRHFV+FGLMEFLRRSFDRQ
Sbjct: 61  ---------------------------------------IHRHFVLFGLMEFLRRSFDRQ 120

Query: 121 FSSDEILQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 168
           FSSDE+LQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Sbjct: 121 FSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 126

[Close]

BLAST of Lag0040166 vs. NCBI nr
Match: XP_022968533.1 (uncharacterized protein LOC111467738 [Cucurbita maxima])

HSP 1 Score: 221.9 bits (564), Expect = 4.2e-54
Identity = 120/167 (71.86%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 1   MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKDQPQIELELKLLQALEIYPLVKLQGND 60
           MESGGKGR+EEQDGMSVHSPCKAPPSSASSLPK+Q QIELELK+LQALEIYPLVKLQG  
Sbjct: 1   MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQSQIELELKILQALEIYPLVKLQG-- 60

Query: 61  NDQLRYCYYYFVLSDETWYGGPEIKNAVILTDLRNDWKSIHRHFVIFGLMEFLRRSFDRQ 120
                                                  IHRHFV+FGLMEFLRRSFDRQ
Sbjct: 61  ---------------------------------------IHRHFVLFGLMEFLRRSFDRQ 120

Query: 121 FSSDEILQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 168
           FSSDE+LQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Sbjct: 121 FSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES 126

The following BLAST results are available for this feature:

BLAST of Lag0040166 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893367.1	1.3e-55	73.65	uncharacterized protein LOC120082183 [Benincasa hispida]	[more]
XP_008446430.1	3.8e-55	73.05	PREDICTED: uncharacterized protein LOC103489178 [Cucumis melo]	[more]
XP_004135149.1	1.5e-54	72.46	uncharacterized protein LOC101212766 isoform X2 [Cucumis sativus] >KGN51973.1 hy...	[more]
XP_022945110.1	2.5e-54	72.46	uncharacterized protein LOC111449449 [Cucurbita moschata] >XP_023541772.1 unchar...	[more]
XP_022968533.1	4.2e-54	71.86	uncharacterized protein LOC111467738 [Cucurbita maxima]	[more]

BLAST of Lag0040166 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR13581:SF6	BNAA07G09500D PROTEIN	coord: 8..66
None	No IPR available	PANTHER	PTHR13581:SF6	BNAA07G09500D PROTEIN	coord: 98..166
IPR012423	Chromatin modification-related protein Eaf7/MRGBP	PANTHER	PTHR13581	MRG-BINDING PROTEIN	coord: 98..166
IPR012423	Chromatin modification-related protein Eaf7/MRGBP	PANTHER	PTHR13581	MRG-BINDING PROTEIN	coord: 8..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040166.1	Lag0040166.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0035267	NuA4 histone acetyltransferase complex
cellular_component	GO:0043189	H4/H2A histone acetyltransferase complex
cellular_component	GO:0005634	nucleus