Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATTTGCTCAAACAGATCAGGTTATTGACTCTTTTTTCTTTAGCTTCAAGAAATTTATAGGTTATAACAAGCAATTTCTATTTCTATATCTAATCAGGCGGGAGAATAGAGAAGAACGAGACAATAAAAGGGAAAGAAATTTGACGACTCCACAAAAGTCTCAATCTTTCAGAGGTAATGTAAAATCCATCACTTAAATTATCATTTTATCGTCTTTATACTTTGAGACTTGATTGTTCTATATTGTTCTAATCTAATTCTATTATTTTTAATGTTATATATTCTAGTTTTGGTTTGAGCTTTCAGATATATATTGTCGTTTTTTTAAAAACAAAAAATAACTTTAAGGTTACCCACGGAATGTTTTCTTAATTTTTTAGAGGGAAGGGTTACGAATAGCATTCGAGGTGGGGGTTGAACCTTGTCGATTGTATATGTTAGGCTCACTTTGGCAAATAATTTTATAAGAAGTCAAATGTATGGCTCATAAACGCTAGGATATGTTTACCAAAATTTCATGTAAAAAAAATACTTAATTCTTTTTGCAAAAATTAACAGTGAATACTATTTTCAAGACTCATTTAACTTAATTTGAGGCGACGTCGTTTTGAGAAATGTTTGTGGTTTGTGCAGAGAAAAAAACGACGGCGCACTGGTTGGGAAGACAATTTTCGCGGCAAATGAGTCGTGGGAATGAATTTTCCGACGAGGGAATAGAGCATGCAACCGCCGTAGCCGCCGCCGTCTTCGCAATTCGTTCCGTTGAAGATCCAGAAATTGAGAGACCCAAAAAGAATAATGCCGATCGTCCTGAAACGTCGTCGTTCCTAATGTTCAAAGACTACAGGGAAGACATTCGCGCCCCCCCTCCAAGGCCGGCGCCGGAACCTGGTAAGGTTTCCCGGCGATTATCAGGTAACTTTTCCTTTTACATTTCTCCGGAAAATCCATCCCCCAGGATAAAAGATTAATTAAAATTTTAAATATATTAATATTGAAACTTATTTTGAAAGCAATCTTAAATTTATGAGACCTTAGTAATAAAATTTAAAAAATTTAGAAAATGTAGCACTCGAAACTAAGCTATTTAATTAATTTTAACCTATATTGTCAATTGTATCAATTTCAACATATCTCTAAGATGAGTATAGCTTTGTATTGATAACCAAGATATTTGTTGTTTGAATCTCTCCGGTATTGAAAAAATTAGATATTTGATTTACCTTTGTTCACTTTTTTTTTAATTCACTTACTAATTTAACACACAAAAAAATATATATTTTTTAAAACTCACAAATTTCAACGAACTAAAGCTACACAAAAGTTCTTCTCCAAAAAAAAAAAAAAAAGCTACACAAAAGCTATCTATTCTATTAGTTCACGAGATCAACCATAAGAACAAATTTCTCAAAACTTTCTAATTTTTTTTTTTAAAAAAAAATCTATCTTTTGTATCATTTTCTATAAACATCCATTAATTTTTGTATTGGATAATGATAAAAGCTTTATAATTCATTAGGCACATATAAAAATATTATTTTTAGCAAATTTAAATTACCTGGGATGAAAATGAAAATTTGGGTACAATTCGATAATAACCTTAGGAGTAAAATTTGATTTTCATTTTCTTTCCAAAACTTTAAAACTATTGAAACTAAACCAAATTTCCAATTTAACCGTAATTTTATCACAAAACTACGATGTACGATTTTATGTTATGATATTAAAAAGCCAAAATCTGGATTTGGATGTATTGAGTGAGATTGTTTATGTTAGATAAAGATCTTCTGAGAGATCCTGAAGAAGGCAGCTCAGGCAGGAAGGTGCCAATGATCTCCGAACAGCAAAAACAGAAACCAACAGAAAAAATAAGCCATCCTTCTTCATCCTTCAAGAAGACAGCTTCTTTTTCCGGCAACAAACCAGACATCTCCGGCAGCAGAAGAACAGAACCAGAAAAACCGGTGGCGGTCCCACTTCTCAGGCCTCCAACTCCGCCGGTCTCTCGGAAGCCATCGACTGGGCCGACCGACACGCAGAAACCAGGCCCAATCCAAACCAAGCCTGGCCCAACTCAAACCAGGCCTTCTGACCCAAGAGAAATAAAAGCAGATTTGTGGGAAAAGGCTGAAATGGCTAAAATCAAAGAGAGGTAATATTCATAATTTTCTTCATAATTTTCTTCTATTGCCAATCGGTTTTTACATTTTGTTGTTTTTTAGGTTATATTCGAGGTGGTTGTTTCGACTTGTTCGGTTTATTTAGTTCATATACTTTTAATGAGATAAAAACATAAATTTAATAGTAACTTTAGAATGGCAATACTTCCCTACTGACTAGGCAGTTGGAAATTCTTGCAGCTCATTATTAAAATTTTCACCACTAAAAAAGTATACACATATAAAAAAATGTAGTCATGGATAATAGGAAACTTTTGCATTTAGTAGGAAAGTGTTTTCTCTAAAAAAAAAAATGTTAGTATGTGTTTTTTTTTCTAAATATAACATAAAATTTGCTCTTCTTCTTCTTATCTTTCTTTTTTGAGAAAAATTTACTCTTCTTGTTATATTTTGTATTATATTGGATTAATTGTATTTGAATTAGGTTACTATTATACTATTTTCGAAAGTTGGTCAACTTTTTGGTATATTTGAAATATAACATATTTATATTTTACTATTTATGTAAATACCCATTAAAAAAAATACACAAGACATATTGATTGTATTTTTTTTTTTTTTTTTTTTTTGAAAAGAAATATGAATTAAGAGCTAGAAATTGCTCCCGAAATTGAGACACCCGTGGGACATATTGATTGTATTATTGAAGGATGTGATTTCCAAAAGATTCAAATTTTGATAACAAAGGCATTAGATCAACCAATAGTGATCTATTAAACTCAAAATTGAAAATCAAAGTTCATAAATACGAAATAAATAATGATGTTGAAAGGACTAAAACTGGAGAATATTTCAGATTCCAGAAAGTGAACGAGACAATTTCATACTGGGAAAGCAAGAAGAGGGAGAAAGCAATGCGAAAATTTGAAGAATCACAGGTTCAAGATCTGTTCATCTCTGTTTAAAGTTCGTTCATTTACATTGAAAACGATCTCAACACTGATTCATTCTGTTCATACATTTGAAGGCTGTGGTAGAGAAAAGGAGGAAGAGGGAAAGAGGAAGAAAGAAGTTCGAGGAAGACATGGAATTCATAAAGCAAATTGCAGGAGAAGCAAGAGCCAAAGCAGATGAAAAACGAAGAAACGACATTCTCAAAGCCAATCAAAAAGCAGACATTATCAGACAAACAGGGGACCTCCCTGTTACTTGTTTCTGCTGCTGA
mRNA sequence
ATGGATAATTTGCTCAAACAGATCAGGCGGGAGAATAGAGAAGAACGAGACAATAAAAGGGAAAGAAATTTGACGACTCCACAAAAGTCTCAATCTTTCAGAGAGAAAAAAACGACGGCGCACTGGTTGGGAAGACAATTTTCGCGGCAAATGAGTCGTGGGAATGAATTTTCCGACGAGGGAATAGAGCATGCAACCGCCGTAGCCGCCGCCGTCTTCGCAATTCGTTCCGTTGAAGATCCAGAAATTGAGAGACCCAAAAAGAATAATGCCGATCGTCCTGAAACGTCGTCGTTCCTAATGTTCAAAGACTACAGGGAAGACATTCGCGCCCCCCCTCCAAGGCCGGCGCCGGAACCTGGTAAGGTTTCCCGGCGATTATCAGATAAAGATCTTCTGAGAGATCCTGAAGAAGGCAGCTCAGGCAGGAAGGTGCCAATGATCTCCGAACAGCAAAAACAGAAACCAACAGAAAAAATAAGCCATCCTTCTTCATCCTTCAAGAAGACAGCTTCTTTTTCCGGCAACAAACCAGACATCTCCGGCAGCAGAAGAACAGAACCAGAAAAACCGGTGGCGGTCCCACTTCTCAGGCCTCCAACTCCGCCGGTCTCTCGGAAGCCATCGACTGGGCCGACCGACACGCAGAAACCAGGCCCAATCCAAACCAAGCCTGGCCCAACTCAAACCAGGCCTTCTGACCCAAGAGAAATAAAAGCAGATTTGTGGGAAAAGGCTGAAATGGCTAAAATCAAAGAGAGATTCCAGAAAGTGAACGAGACAATTTCATACTGGGAAAGCAAGAAGAGGGAGAAAGCAATGCGAAAATTTGAAGAATCACAGGCTGTGGTAGAGAAAAGGAGGAAGAGGGAAAGAGGAAGAAAGAAGTTCGAGGAAGACATGGAATTCATAAAGCAAATTGCAGGAGAAGCAAGAGCCAAAGCAGATGAAAAACGAAGAAACGACATTCTCAAAGCCAATCAAAAAGCAGACATTATCAGACAAACAGGGGACCTCCCTGTTACTTGTTTCTGCTGCTGA
Coding sequence (CDS)
ATGGATAATTTGCTCAAACAGATCAGGCGGGAGAATAGAGAAGAACGAGACAATAAAAGGGAAAGAAATTTGACGACTCCACAAAAGTCTCAATCTTTCAGAGAGAAAAAAACGACGGCGCACTGGTTGGGAAGACAATTTTCGCGGCAAATGAGTCGTGGGAATGAATTTTCCGACGAGGGAATAGAGCATGCAACCGCCGTAGCCGCCGCCGTCTTCGCAATTCGTTCCGTTGAAGATCCAGAAATTGAGAGACCCAAAAAGAATAATGCCGATCGTCCTGAAACGTCGTCGTTCCTAATGTTCAAAGACTACAGGGAAGACATTCGCGCCCCCCCTCCAAGGCCGGCGCCGGAACCTGGTAAGGTTTCCCGGCGATTATCAGATAAAGATCTTCTGAGAGATCCTGAAGAAGGCAGCTCAGGCAGGAAGGTGCCAATGATCTCCGAACAGCAAAAACAGAAACCAACAGAAAAAATAAGCCATCCTTCTTCATCCTTCAAGAAGACAGCTTCTTTTTCCGGCAACAAACCAGACATCTCCGGCAGCAGAAGAACAGAACCAGAAAAACCGGTGGCGGTCCCACTTCTCAGGCCTCCAACTCCGCCGGTCTCTCGGAAGCCATCGACTGGGCCGACCGACACGCAGAAACCAGGCCCAATCCAAACCAAGCCTGGCCCAACTCAAACCAGGCCTTCTGACCCAAGAGAAATAAAAGCAGATTTGTGGGAAAAGGCTGAAATGGCTAAAATCAAAGAGAGATTCCAGAAAGTGAACGAGACAATTTCATACTGGGAAAGCAAGAAGAGGGAGAAAGCAATGCGAAAATTTGAAGAATCACAGGCTGTGGTAGAGAAAAGGAGGAAGAGGGAAAGAGGAAGAAAGAAGTTCGAGGAAGACATGGAATTCATAAAGCAAATTGCAGGAGAAGCAAGAGCCAAAGCAGATGAAAAACGAAGAAACGACATTCTCAAAGCCAATCAAAAAGCAGACATTATCAGACAAACAGGGGACCTCCCTGTTACTTGTTTCTGCTGCTGA
Protein sequence
MDNLLKQIRRENREERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVFAIRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEPGKVSRRLSDKDLLRDPEEGSSGRKVPMISEQQKQKPTEKISHPSSSFKKTASFSGNKPDISGSRRTEPEKPVAVPLLRPPTPPVSRKPSTGPTDTQKPGPIQTKPGPTQTRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVVEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILKANQKADIIRQTGDLPVTCFCC
Homology
BLAST of Lag0040157 vs. NCBI nr
Match:
XP_023542546.1 (proteoglycan 4-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 356.3 bits (913), Expect = 3.0e-94
Identity = 230/375 (61.33%), Postives = 263/375 (70.13%), Query Frame = 0
Query: 1 MDNLLKQIRRENREERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDE 60
MD+ + +R++R ++ + L P KSQSFRE KTTA WLGRQF +QMSRGNEFSD+
Sbjct: 40 MDHWVTTDEDIDRQQRASRTQTYL-FPLKSQSFRE-KTTAGWLGRQFLQQMSRGNEFSDD 99
Query: 61 GIEHATAVAAAVFAIRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEP 120
IE TAVAAA +AI S+++ EI R KK NAD PETSSF F +ED R P PRPAPEP
Sbjct: 100 EIERVTAVAAAAYAIHSIQNSEIARRKK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEP 159
Query: 121 GKVSRRLSDKDLLRDPEEGSSGRKVPMISEQQKQKPTEKISHPSSS--FKKTASFSGNKP 180
K+SRRL DKDLL+DPEE S R V + EQ KQKPTEK + P + FK+TA FSGNKP
Sbjct: 160 AKLSRRLIDKDLLKDPEE-SPVRNVSVTHEQPKQKPTEKTTDPGNRPYFKETA-FSGNKP 219
Query: 181 DISGSRRTEPEKPVAVPLLRPPTPP----VSRKPSTGP-----------TDTQKPGPI-- 240
DISGSRRTEPEKP + R P +S T P T+ +KP +
Sbjct: 220 DISGSRRTEPEKPSNISGSRRTEPEKPAGISGSRRTEPEKSADISGRRRTEPEKPAVVPR 279
Query: 241 ----------QTKPGPTQTRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKRE 300
KP PTQTRP D RE KAD WEKAEMAKI ERF KVNET+SYWE KKR+
Sbjct: 280 PPTPINRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVNETVSYWERKKRD 339
Query: 301 KAMRKFEESQAVVEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILKANQKAD 347
KAMRK+EESQA KR KRE+GRKKFEEDM+FIKQIA EARAKAD+KRRNDILKANQKAD
Sbjct: 340 KAMRKYEESQAAGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKAD 399
BLAST of Lag0040157 vs. NCBI nr
Match:
XP_023542547.1 (proteoglycan 4-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 347.4 bits (890), Expect = 1.4e-91
Identity = 228/375 (60.80%), Postives = 261/375 (69.60%), Query Frame = 0
Query: 1 MDNLLKQIRRENREERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDE 60
MD+ + +R++R ++ + L P KSQSFRE KTTA WLGRQF +QMSRGNEFSD+
Sbjct: 40 MDHWVTTDEDIDRQQRASRTQTYL-FPLKSQSFRE-KTTAGWLGRQFLQQMSRGNEFSDD 99
Query: 61 GIEHATAVAAAVFAIRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEP 120
IE TAVAAA +AI S+++ EI R KK NAD PETSSF F +ED R P PRPAPEP
Sbjct: 100 EIERVTAVAAAAYAIHSIQNSEIARRKK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEP 159
Query: 121 GKVSRRLSDKDLLRDPEEGSSGRKVPMISEQQKQKPTEKISHPSSS--FKKTASFSGNKP 180
K+SRRL DLL+DPEE S R V + EQ KQKPTEK + P + FK+TA FSGNKP
Sbjct: 160 AKLSRRLI--DLLKDPEE-SPVRNVSVTHEQPKQKPTEKTTDPGNRPYFKETA-FSGNKP 219
Query: 181 DISGSRRTEPEKPVAVPLLRPPTPP----VSRKPSTGP-----------TDTQKPGPI-- 240
DISGSRRTEPEKP + R P +S T P T+ +KP +
Sbjct: 220 DISGSRRTEPEKPSNISGSRRTEPEKPAGISGSRRTEPEKSADISGRRRTEPEKPAVVPR 279
Query: 241 ----------QTKPGPTQTRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKRE 300
KP PTQTRP D RE KAD WEKAEMAKI ERF KVNET+SYWE KKR+
Sbjct: 280 PPTPINRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVNETVSYWERKKRD 339
Query: 301 KAMRKFEESQAVVEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILKANQKAD 347
KAMRK+EESQA KR KRE+GRKKFEEDM+FIKQIA EARAKAD+KRRNDILKANQKAD
Sbjct: 340 KAMRKYEESQAAGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKAD 399
BLAST of Lag0040157 vs. NCBI nr
Match:
XP_022945437.1 (uncharacterized protein LOC111449668 isoform X5 [Cucurbita moschata])
HSP 1 Score: 346.3 bits (887), Expect = 3.1e-91
Identity = 220/351 (62.68%), Postives = 246/351 (70.09%), Query Frame = 0
Query: 15 ERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVFA 74
++ R + P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE TAVAAA +A
Sbjct: 14 QQRGSRTQTYLFPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYA 73
Query: 75 IRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEPGKVSRRLSDKDLLR 134
I S+++ EI R +K NAD PETSSF F +ED R P PRPAPEP K+SRRL DKD L+
Sbjct: 74 IHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHLQ 133
Query: 135 DPEEGSSGRKVPMISEQQKQKPTEKISHPSSS--FKKTASFSGNKPD------------- 194
DPE+ S R V + EQ K+KPTE + P S FK+TA FSGNKPD
Sbjct: 134 DPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKPE 193
Query: 195 ----ISGSRRTEPEKPVAVPLLRPPTPPVSRKPSTGPTDTQKPGPIQTKPGPTQTRPSDP 254
ISGSRRTEPEKP VP RPPT P PTD Q KP PTQTRP D
Sbjct: 194 KPSNISGSRRTEPEKPAVVP--RPPT------PFNRPTDPQ-------KPLPTQTRPYDS 253
Query: 255 REIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVVEKRRKRERGRK 314
RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA KR KRE+G K
Sbjct: 254 RETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIK 313
Query: 315 KFEEDMEFIKQIAGEARAKADEKRRNDILKANQKADIIRQTGDLPVTCFCC 347
KFEEDM+FIKQIA EARAKAD+KRRNDILKANQKADIIRQTGDLPV+C CC
Sbjct: 314 KFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 345
BLAST of Lag0040157 vs. NCBI nr
Match:
XP_022968312.1 (neurofilament medium polypeptide-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 342.0 bits (876), Expect = 5.8e-90
Identity = 225/381 (59.06%), Postives = 257/381 (67.45%), Query Frame = 0
Query: 1 MDNLLKQIRRENREERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDE 60
MD+ + + +R++R + + L P KSQSFRE KTTA WLGRQF +QMSRGNEFSD+
Sbjct: 1 MDHWVTTDQDIDRQQRGTRTQTYL-FPLKSQSFRE-KTTAGWLGRQFLQQMSRGNEFSDD 60
Query: 61 GIEHATAVAAAVFAIRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEP 120
IE TAVAAA +AI S ++ EI R KK NAD P TSSF F +ED R P PRPAPEP
Sbjct: 61 EIERVTAVAAAAYAIHSFQNSEIARRKK-NADYPGTSSFPKFTHLKEDNRPPTPRPAPEP 120
Query: 121 GKVSRRLSDKDLLRDPEEGSSGRKVPMISEQQKQKPTEKISHPSS--SFKKTASFSGNKP 180
K+SR L DKDLL+DPEE S GR V + EQ KQKPTEK + P S FK+TA FSGNKP
Sbjct: 121 AKLSRPLIDKDLLQDPEE-SPGRNVSVTHEQPKQKPTEKTTDPGSYPYFKETA-FSGNKP 180
Query: 181 DISGSRRTEPEKP-------------------VAVPLLRPPTPP--VSRKPSTGPTDTQK 240
DISGSRRTEPEKP ++ P P +S + T P +K
Sbjct: 181 DISGSRRTEPEKPEKPSNISGGRRAEPEKPAGISGSQRTEPEKPADISGRRRTEPEKPEK 240
Query: 241 PGPI------------QTKPGPTQTRPSDPREIKADLWEKAEMAKIKERFQKVNETISYW 300
P + KP PTQT P D RE KAD WEK EMAKI ERF KV ET+SYW
Sbjct: 241 PAVVPRPPTPFTRPTDPQKPHPTQTIPYDSRETKADQWEKTEMAKINERFHKVIETVSYW 300
Query: 301 ESKKREKAMRKFEESQAVVEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILK 347
E KKR+KAMRK++ESQA KR KRE+GRKKFEEDM+FIKQIA EARAKAD KRRNDILK
Sbjct: 301 ERKKRDKAMRKYDESQAAGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADRKRRNDILK 360
BLAST of Lag0040157 vs. NCBI nr
Match:
XP_022945435.1 (remorin 4.1-like isoform X3 [Cucurbita moschata])
HSP 1 Score: 340.1 bits (871), Expect = 2.2e-89
Identity = 217/357 (60.78%), Postives = 246/357 (68.91%), Query Frame = 0
Query: 15 ERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVFA 74
++ R + P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE TAVAAA +A
Sbjct: 14 QQRGSRTQTYLFPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYA 73
Query: 75 IRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEPGKVSRRLSDKDLLR 134
I S+++ EI R +K NAD PETSSF F +ED R P PRPAPEP K+SRRL DKD L+
Sbjct: 74 IHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHLQ 133
Query: 135 DPEEGSSGRKVPMISEQQKQKPTEKISHPSSS--FKKTASFSGNKPDISGSRRTEPEKPV 194
DPE+ S R V + EQ K+KPTE + P S FK+TA FSGNKPD SGSRRT+PEKP
Sbjct: 134 DPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKPS 193
Query: 195 AVPLLR--------------------PPTPPVSRKPST---GPTDTQKPGPIQTKPGPTQ 254
+ R P P V +P T PTD Q KP PTQ
Sbjct: 194 NISGSRRTETEKPAGISGSRRTEPEKPEKPAVVPRPPTPFNRPTDPQ-------KPLPTQ 253
Query: 255 TRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVVEKRRK 314
TRP D RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA KR K
Sbjct: 254 TRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSK 313
Query: 315 RERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILKANQKADIIRQTGDLPVTCFCC 347
RE+G KKFEEDM+FIKQIA EARAKAD+KRRNDILKANQKADIIRQTGDLPV+C CC
Sbjct: 314 REKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 359
BLAST of Lag0040157 vs. ExPASy TrEMBL
Match:
A0A6J1G0X5 (uncharacterized protein LOC111449668 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 1.5e-91
Identity = 220/351 (62.68%), Postives = 246/351 (70.09%), Query Frame = 0
Query: 15 ERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVFA 74
++ R + P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE TAVAAA +A
Sbjct: 14 QQRGSRTQTYLFPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYA 73
Query: 75 IRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEPGKVSRRLSDKDLLR 134
I S+++ EI R +K NAD PETSSF F +ED R P PRPAPEP K+SRRL DKD L+
Sbjct: 74 IHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHLQ 133
Query: 135 DPEEGSSGRKVPMISEQQKQKPTEKISHPSSS--FKKTASFSGNKPD------------- 194
DPE+ S R V + EQ K+KPTE + P S FK+TA FSGNKPD
Sbjct: 134 DPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKPE 193
Query: 195 ----ISGSRRTEPEKPVAVPLLRPPTPPVSRKPSTGPTDTQKPGPIQTKPGPTQTRPSDP 254
ISGSRRTEPEKP VP RPPT P PTD Q KP PTQTRP D
Sbjct: 194 KPSNISGSRRTEPEKPAVVP--RPPT------PFNRPTDPQ-------KPLPTQTRPYDS 253
Query: 255 REIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVVEKRRKRERGRK 314
RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA KR KRE+G K
Sbjct: 254 RETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIK 313
Query: 315 KFEEDMEFIKQIAGEARAKADEKRRNDILKANQKADIIRQTGDLPVTCFCC 347
KFEEDM+FIKQIA EARAKAD+KRRNDILKANQKADIIRQTGDLPV+C CC
Sbjct: 314 KFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 345
BLAST of Lag0040157 vs. ExPASy TrEMBL
Match:
A0A6J1HT98 (neurofilament medium polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467581 PE=3 SV=1)
HSP 1 Score: 342.0 bits (876), Expect = 2.8e-90
Identity = 225/381 (59.06%), Postives = 257/381 (67.45%), Query Frame = 0
Query: 1 MDNLLKQIRRENREERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDE 60
MD+ + + +R++R + + L P KSQSFRE KTTA WLGRQF +QMSRGNEFSD+
Sbjct: 1 MDHWVTTDQDIDRQQRGTRTQTYL-FPLKSQSFRE-KTTAGWLGRQFLQQMSRGNEFSDD 60
Query: 61 GIEHATAVAAAVFAIRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEP 120
IE TAVAAA +AI S ++ EI R KK NAD P TSSF F +ED R P PRPAPEP
Sbjct: 61 EIERVTAVAAAAYAIHSFQNSEIARRKK-NADYPGTSSFPKFTHLKEDNRPPTPRPAPEP 120
Query: 121 GKVSRRLSDKDLLRDPEEGSSGRKVPMISEQQKQKPTEKISHPSS--SFKKTASFSGNKP 180
K+SR L DKDLL+DPEE S GR V + EQ KQKPTEK + P S FK+TA FSGNKP
Sbjct: 121 AKLSRPLIDKDLLQDPEE-SPGRNVSVTHEQPKQKPTEKTTDPGSYPYFKETA-FSGNKP 180
Query: 181 DISGSRRTEPEKP-------------------VAVPLLRPPTPP--VSRKPSTGPTDTQK 240
DISGSRRTEPEKP ++ P P +S + T P +K
Sbjct: 181 DISGSRRTEPEKPEKPSNISGGRRAEPEKPAGISGSQRTEPEKPADISGRRRTEPEKPEK 240
Query: 241 PGPI------------QTKPGPTQTRPSDPREIKADLWEKAEMAKIKERFQKVNETISYW 300
P + KP PTQT P D RE KAD WEK EMAKI ERF KV ET+SYW
Sbjct: 241 PAVVPRPPTPFTRPTDPQKPHPTQTIPYDSRETKADQWEKTEMAKINERFHKVIETVSYW 300
Query: 301 ESKKREKAMRKFEESQAVVEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILK 347
E KKR+KAMRK++ESQA KR KRE+GRKKFEEDM+FIKQIA EARAKAD KRRNDILK
Sbjct: 301 ERKKRDKAMRKYDESQAAGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADRKRRNDILK 360
BLAST of Lag0040157 vs. ExPASy TrEMBL
Match:
A0A6J1G0X6 (remorin 4.1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)
HSP 1 Score: 340.1 bits (871), Expect = 1.1e-89
Identity = 217/357 (60.78%), Postives = 246/357 (68.91%), Query Frame = 0
Query: 15 ERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVFA 74
++ R + P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE TAVAAA +A
Sbjct: 14 QQRGSRTQTYLFPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYA 73
Query: 75 IRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEPGKVSRRLSDKDLLR 134
I S+++ EI R +K NAD PETSSF F +ED R P PRPAPEP K+SRRL DKD L+
Sbjct: 74 IHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHLQ 133
Query: 135 DPEEGSSGRKVPMISEQQKQKPTEKISHPSSS--FKKTASFSGNKPDISGSRRTEPEKPV 194
DPE+ S R V + EQ K+KPTE + P S FK+TA FSGNKPD SGSRRT+PEKP
Sbjct: 134 DPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKPS 193
Query: 195 AVPLLR--------------------PPTPPVSRKPST---GPTDTQKPGPIQTKPGPTQ 254
+ R P P V +P T PTD Q KP PTQ
Sbjct: 194 NISGSRRTETEKPAGISGSRRTEPEKPEKPAVVPRPPTPFNRPTDPQ-------KPLPTQ 253
Query: 255 TRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVVEKRRK 314
TRP D RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA KR K
Sbjct: 254 TRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSK 313
Query: 315 RERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILKANQKADIIRQTGDLPVTCFCC 347
RE+G KKFEEDM+FIKQIA EARAKAD+KRRNDILKANQKADIIRQTGDLPV+C CC
Sbjct: 314 REKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 359
BLAST of Lag0040157 vs. ExPASy TrEMBL
Match:
A0A6J1G0U8 (muscle M-line assembly protein unc-89-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)
HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 214/350 (61.14%), Postives = 246/350 (70.29%), Query Frame = 0
Query: 15 ERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVFA 74
++ R + P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE TAVAAA +A
Sbjct: 14 QQRGSRTQTYLFPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYA 73
Query: 75 IRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEPGKVSRRLSDKDLLR 134
I S+++ EI R +K NAD PETSSF F +ED R P PRPAPEP K+SRRL DKD L+
Sbjct: 74 IHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHLQ 133
Query: 135 DPEEGSSGRKVPMISEQQKQKPTEKISHPSSS--FKKTASFSGNKPDISGSRRTEPEKPV 194
DPE+ S R V + EQ K+KPTE + P S FK+TA FSGNKPD SGSRRT+PEKP
Sbjct: 134 DPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKPS 193
Query: 195 AVPLLRPPTPPVSRKPS----TGPTDTQKPGPI------------QTKPGPTQTRPSDPR 254
+ R KPS + T+ +KP + KP PTQTRP D R
Sbjct: 194 NISGSRRTETEKPEKPSNISGSRRTEPEKPAVVPRPPTPFNRPTDPQKPLPTQTRPYDSR 253
Query: 255 EIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVVEKRRKRERGRKK 314
E KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA KR KRE+G KK
Sbjct: 254 ETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIKK 313
Query: 315 FEEDMEFIKQIAGEARAKADEKRRNDILKANQKADIIRQTGDLPVTCFCC 347
FEEDM+FIKQIA EARAKAD+KRRNDILKANQKADIIRQTGDLPV+C CC
Sbjct: 314 FEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 359
BLAST of Lag0040157 vs. ExPASy TrEMBL
Match:
A0A6J1G0V8 (neurofilament medium polypeptide-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)
HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 220/376 (58.51%), Postives = 246/376 (65.43%), Query Frame = 0
Query: 15 ERDNKRERNLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVFA 74
++ R + P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE TAVAAA +A
Sbjct: 14 QQRGSRTQTYLFPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYA 73
Query: 75 IRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAPPPRPAPEPGKVSRRLSDKDLLR 134
I S+++ EI R +K NAD PETSSF F +ED R P PRPAPEP K+SRRL DKD L+
Sbjct: 74 IHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHLQ 133
Query: 135 DPEEGSSGRKVPMISEQQKQKPTEKISHPSSS--FKKTASFSGNKPD------------- 194
DPE+ S R V + EQ K+KPTE + P S FK+TA FSGNKPD
Sbjct: 134 DPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKPS 193
Query: 195 -----------------------------ISGSRRTEPEKPVAVPLLRPPTPPVSRKPST 254
ISGSRRTEPEKP VP RPPT P
Sbjct: 194 NISGSRRTETEKPAGISGSRRTEPEKPSNISGSRRTEPEKPAVVP--RPPT------PFN 253
Query: 255 GPTDTQKPGPIQTKPGPTQTRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKR 314
PTD Q KP PTQTRP D RE KAD WEKAEMAKI ERF KV ET+SYWE KKR
Sbjct: 254 RPTDPQ-------KPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKR 313
Query: 315 EKAMRKFEESQAVVEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILKANQKA 347
+KA RK++ESQA KR KRE+G KKFEEDM+FIKQIA EARAKAD+KRRNDILKANQKA
Sbjct: 314 DKARRKYDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKA 370
BLAST of Lag0040157 vs. TAIR 10
Match:
AT1G13920.1 (Remorin family protein )
HSP 1 Score: 133.3 bits (334), Expect = 3.8e-31
Identity = 132/366 (36.07%), Postives = 190/366 (51.91%), Query Frame = 0
Query: 1 MDNLLKQIRRENREERDNKRERNLTT------PQKSQSFRE-KKTTAHWLGRQFSRQMSR 60
MD L+KQ RR++ ++ RE +T +KS SF+E KK ++WL +QFSRQMS
Sbjct: 1 MDTLIKQTRRKHPASQEKIREVGSSTREKKVSARKSVSFKEDKKKPSNWLQKQFSRQMS- 60
Query: 61 GNEFSDEG-IEHATAVAAAVFAIRSVEDPEIERPKKNNADRPETSSFLMFKDYREDIRAP 120
G + G ++HA AVAA +AI + E+ +E P +S R R+
Sbjct: 61 GQSYDPIGEMDHAAAVAATAYAIATFEETWLENYHSGLELGPSSS--------RSKSRSE 120
Query: 121 PPRPAPEPGKVSRRLSDKDLLRDPEEGSSGRKVPMISEQQKQKPTEKISHPSSSFKKTAS 180
P EP +SRR S + D E + K P + ++ SSS KKT S
Sbjct: 121 ELLPLEEPRSLSRRFSGQLSFIDSE--TKDHKPPTLKSPMRK---------SSSVKKTFS 180
Query: 181 FS-----GNKPDISGSRRTEPEKPVA-VPLLRPP--TPPVSRKPSTGPTDTQKPGPIQTK 240
+ + S + KPV+ P ++PP T R P P P P++
Sbjct: 181 MNLMGDHTKQNQDSEEKHERQRKPVSEPPRIQPPLRTRSEPRAPPPPPPPLLSPSPLRLP 240
Query: 241 PGPTQTRPSDPREIK----ADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEES 300
P T+ + S+ K AD WEKAE++KIK R++K+N I WE+KKREKA RK + S
Sbjct: 241 PRETKRQSSEHTSRKDDSTADAWEKAELSKIKARYEKLNRKIDLWEAKKREKARRKLDIS 300
Query: 301 -QAVVEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILKANQKADIIRQTGDL 346
Q+ +E+RRK RG ++F ED E+I+QIA ARA+A++ R++ K +KA +IR TG L
Sbjct: 301 EQSELEQRRK--RGLQRFREDTEYIEQIAAGARAQAEKDRQSKEFKVKEKAGVIRSTGKL 344
BLAST of Lag0040157 vs. TAIR 10
Match:
AT1G69325.1 (Remorin family protein )
HSP 1 Score: 65.9 bits (159), Expect = 7.5e-11
Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = 0
Query: 241 DLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVVEKRRKRERGRKKFEED 300
D W++ E++K +++++K++E I WE KKR+KA RK ++ VEK + + ++F ++
Sbjct: 19 DQWKETEISKSRKKYEKLSEKIVSWEDKKRKKAKRKLHRTERSVEKTKL--KATQRFRDE 78
Query: 301 MEFIKQIAGEARAKADEKRRNDILKANQKADIIRQTGDLPVTC 344
E I+ I ARA A E R + LK +KA+++R TG P TC
Sbjct: 79 NERIEIIVASARAHAYESRIKEELKVKEKANLMRTTGRKPSTC 119
BLAST of Lag0040157 vs. TAIR 10
Match:
AT5G61280.1 (Remorin family protein )
HSP 1 Score: 43.1 bits (100), Expect = 5.2e-04
Identity = 36/134 (26.87%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 212 PTDTQKPGPIQTKPGPTQTRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKRE 271
P++ ++P I + G + + KAD WEK+++ KI+ R++K+ I WE++++
Sbjct: 131 PSENRRPQEIGSSSGTSGLASASS---KADSWEKSQIKKIRLRYEKMKADIVGWENERKL 190
Query: 272 KAMRKFEESQAVVEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRNDILKANQKAD 331
A E+ ++ +EKR + + ++ + I+ IA A+ + +EKRR+ + + K
Sbjct: 191 AATLLMEKRKSELEKR--KGINNQHYKSKLARIQLIADGAKKQLEEKRRSKEAQVHGKVK 250
Query: 332 IIRQTGDLPVTCFC 346
+ +TG +P FC
Sbjct: 251 KMSRTGKVPNNYFC 259
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023542546.1 | 3.0e-94 | 61.33 | proteoglycan 4-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
| XP_023542547.1 | 1.4e-91 | 60.80 | proteoglycan 4-like isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022945437.1 | 3.1e-91 | 62.68 | uncharacterized protein LOC111449668 isoform X5 [Cucurbita moschata] | [more] |
| XP_022968312.1 | 5.8e-90 | 59.06 | neurofilament medium polypeptide-like isoform X1 [Cucurbita maxima] | [more] |
| XP_022945435.1 | 2.2e-89 | 60.78 | remorin 4.1-like isoform X3 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1G0X5 | 1.5e-91 | 62.68 | uncharacterized protein LOC111449668 isoform X5 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1HT98 | 2.8e-90 | 59.06 | neurofilament medium polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=... | [more] |
| A0A6J1G0X6 | 1.1e-89 | 60.78 | remorin 4.1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 S... | [more] |
| A0A6J1G0U8 | 1.4e-89 | 61.14 | muscle M-line assembly protein unc-89-like isoform X4 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1G0V8 | 1.2e-88 | 58.51 | neurofilament medium polypeptide-like isoform X1 OS=Cucurbita moschata OX=3662 G... | [more] |
