Lag0040124 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040124
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	transcription termination factor MTEF1, chloroplastic
Location	chr13: 2355859 .. 2356782 (-)
RNA-Seq Expression	Lag0040124
Synteny	Lag0040124

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGCAAAATCCAAGTTCCTCCTCCATGGATCCCCTTCCTATTTCCTCGGTTCTCAGCCCCATCTCTCAAGCTTCTGAGGAACCCTAATTTCAGAAAACCCCGGTTCACCGTTTCCCTCAATTCCCAATTTTCCTACCATTCAGACTCCGGCCTTCTTTTCCGGCAGAAAATACTCTACCTCGAGAATCACCTTCATGTAGATTTCCGTAAAGCCTTCCGGGAGAATCCAGATTCTCGCTCCGCCACTCTCTCCGCCCTCAAGTCCGTCGAGGTCTGTCTCTCCTCCATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTCCTCGACATGTACCCTCAACTTCTCACTTCAGACCCGGACTATGACCTTTACCCCATCTTCGATTTCCTTCTCAATGAGGTTCAAATTCCATTTCCCGACATTCGAAAATCCATAATTCGGTGCCCTAGAATTCTCGTCTCCGACCTGGACCTTCAATTGCGACCTGCGTTGAAGTTCTTGCGCGACCTAGGTTTCGTTGGGTTTAATGCCATCACTTGCCAGACGACAATGCTACTGGTTTCAAGTGTTGAACACACGCTCTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACAAAGATGTGGTTAATATGGTGTTAAGGTCTCCGGGGTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGGATTATTTTTTAGTAGACATGAAAGGTGATTTGTTGGAATTGAAAAGGTTTCCGCAATATTTTTCGTTTAGTTTGGAGAAAAAGATTAAGCCGCGTCACCGTTTGTTGGTTGAGCATGGATTGTCGCTTTCTTTGTCGAAAATGCTGAAGGTTAGTGATGGGGAGTTCACTTCAAGGTTGATAGAAATGCGATTGCAGTCGTTGACGGCAGATGGTTGA

mRNA sequence

ATGATAAGCAAAATCCAAGTTCCTCCTCCATGGATCCCCTTCCTATTTCCTCGGTTCTCAGCCCCATCTCTCAAGCTTCTGAGGAACCCTAATTTCAGAAAACCCCGGTTCACCGTTTCCCTCAATTCCCAATTTTCCTACCATTCAGACTCCGGCCTTCTTTTCCGGCAGAAAATACTCTACCTCGAGAATCACCTTCATGTAGATTTCCGTAAAGCCTTCCGGGAGAATCCAGATTCTCGCTCCGCCACTCTCTCCGCCCTCAAGTCCGTCGAGGTCTGTCTCTCCTCCATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTCCTCGACATGTACCCTCAACTTCTCACTTCAGACCCGGACTATGACCTTTACCCCATCTTCGATTTCCTTCTCAATGAGGTTCAAATTCCATTTCCCGACATTCGAAAATCCATAATTCGGTGCCCTAGAATTCTCGTCTCCGACCTGGACCTTCAATTGCGACCTGCGTTGAAGTTCTTGCGCGACCTAGGTTTCGTTGGGTTTAATGCCATCACTTGCCAGACGACAATGCTACTGGTTTCAAGTGTTGAACACACGCTCTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACAAAGATGTGGTTAATATGGTGTTAAGGTCTCCGGGGTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGGATTATTTTTTAGTAGACATGAAAGGTGATTTGTTGGAATTGAAAAGGTTTCCGCAATATTTTTCGTTTAGTTTGGAGAAAAAGATTAAGCCGCGTCACCGTTTGTTGGTTGAGCATGGATTGTCGCTTTCTTTGTCGAAAATGCTGAAGGTTAGTGATGGGGAGTTCACTTCAAGGTTGATAGAAATGCGATTGCAGTCGTTGACGGCAGATGGTTGA

Coding sequence (CDS)

ATGATAAGCAAAATCCAAGTTCCTCCTCCATGGATCCCCTTCCTATTTCCTCGGTTCTCAGCCCCATCTCTCAAGCTTCTGAGGAACCCTAATTTCAGAAAACCCCGGTTCACCGTTTCCCTCAATTCCCAATTTTCCTACCATTCAGACTCCGGCCTTCTTTTCCGGCAGAAAATACTCTACCTCGAGAATCACCTTCATGTAGATTTCCGTAAAGCCTTCCGGGAGAATCCAGATTCTCGCTCCGCCACTCTCTCCGCCCTCAAGTCCGTCGAGGTCTGTCTCTCCTCCATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTCCTCGACATGTACCCTCAACTTCTCACTTCAGACCCGGACTATGACCTTTACCCCATCTTCGATTTCCTTCTCAATGAGGTTCAAATTCCATTTCCCGACATTCGAAAATCCATAATTCGGTGCCCTAGAATTCTCGTCTCCGACCTGGACCTTCAATTGCGACCTGCGTTGAAGTTCTTGCGCGACCTAGGTTTCGTTGGGTTTAATGCCATCACTTGCCAGACGACAATGCTACTGGTTTCAAGTGTTGAACACACGCTCTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACAAAGATGTGGTTAATATGGTGTTAAGGTCTCCGGGGTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGGATTATTTTTTAGTAGACATGAAAGGTGATTTGTTGGAATTGAAAAGGTTTCCGCAATATTTTTCGTTTAGTTTGGAGAAAAAGATTAAGCCGCGTCACCGTTTGTTGGTTGAGCATGGATTGTCGCTTTCTTTGTCGAAAATGCTGAAGGTTAGTGATGGGGAGTTCACTTCAAGGTTGATAGAAATGCGATTGCAGTCGTTGACGGCAGATGGTTGA

Protein sequence

MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKILYLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLVDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG

Homology

[Close]

BLAST of Lag0040124 vs. NCBI nr
Match: XP_023542512.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542513.1 transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 281/307 (91.53%), Postives = 295/307 (96.09%), Query Frame = 0


Query: 1   MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKIL 60
           MIS++Q  PPW  FLFPR SAPSLK+LRNPNFRKPRFT+SLNSQFS HSD+GLLFRQKIL
Sbjct: 1   MISRVQNLPPWNLFLFPRSSAPSLKVLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 61  YLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120
           YLENHLHVDFRKAFRENPDSRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLV 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSHKDVVNMVLRSP LLTYSIQNNLVPKVDYFL 
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRL 300
           DMKGDL EL+RFPQYFSFSLE+KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTADG 308
           QS TADG
Sbjct: 301 QSSTADG 307

[Close]

BLAST of Lag0040124 vs. NCBI nr
Match: KAG7013135.1 (Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 549.7 bits (1415), Expect = 1.6e-152
Identity = 280/307 (91.21%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1   MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKIL 60
           MIS++Q  PPW  FLFPR SAPSL  LRNPNFRKPRFT+SLNSQFS HSD+GLLFRQKIL
Sbjct: 1   MISRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 61  YLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120
           YLENHLHVDFRKAFRENPDSRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLV 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSHKDVVNMVLRSP LLTYSIQNNLVPKVDYFL 
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRL 300
           DMKGDL EL+RFPQYFSFSLE+KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTADG 308
           QS TADG
Sbjct: 301 QSSTADG 307

[Close]

BLAST of Lag0040124 vs. NCBI nr
Match: XP_022945324.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_022945325.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 545.8 bits (1405), Expect = 2.4e-151
Identity = 278/307 (90.55%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1   MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKIL 60
           M+S++Q  PPW  FLFPR SAPSL  LRNPNFRKPRFT+SLNSQFS HSD+GLLFRQKIL
Sbjct: 1   MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 61  YLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120
           YLENHL+VDFRKAFRENPDSRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP
Sbjct: 61  YLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLV 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSHKDVVNMVLRSP LLTYSIQNNLVPKVDYFL 
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRL 300
           DMKGDL EL+RFPQYFSFSLE+KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTADG 308
           QS TADG
Sbjct: 301 QSSTADG 307

[Close]

BLAST of Lag0040124 vs. NCBI nr
Match: XP_022968085.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita maxima] >XP_022968086.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 540.0 bits (1390), Expect = 1.3e-149
Identity = 276/307 (89.90%), Postives = 290/307 (94.46%), Query Frame = 0


Query: 1   MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKIL 60
           MIS++Q  PP   FLFPR S PSL  +RNPNFRKPRFT+SLNSQFS HSD+GL FRQKIL
Sbjct: 1   MISRVQNLPPCNRFLFPRSSTPSLNPMRNPNFRKPRFTISLNSQFSDHSDAGLHFRQKIL 60

Query: 61  YLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120
           YLENHLHVDFRKAFRENPDSRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLV 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSHKDVVNMVLRSP LLTYSIQNNLVPKVDYFL 
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRL 300
           DMKGDL EL+RFPQYFSFSLE+KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTADG 308
           QS TADG
Sbjct: 301 QSSTADG 307

[Close]

BLAST of Lag0040124 vs. NCBI nr
Match: XP_022151208.1 (transcription termination factor MTEF1, chloroplastic [Momordica charantia] >XP_022151209.1 transcription termination factor MTEF1, chloroplastic [Momordica charantia] >XP_022151210.1 transcription termination factor MTEF1, chloroplastic [Momordica charantia])

HSP 1 Score: 526.9 bits (1356), Expect = 1.1e-145
Identity = 271/313 (86.58%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYH------SDSGLL 60
           MIS++Q PPP I  LFPR S PSLK   NPNFR PRFTV++N+QFS H      SDSG+L
Sbjct: 1   MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGIL 60

Query: 61  FRQKILYLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQ 120
           FR+KILYLENHLHVD RKAF++NPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQ
Sbjct: 61  FREKILYLENHLHVDSRKAFQQNPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQ 120

Query: 121 LLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFV 180
           LLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSIIRCPRILVSDLDLQLRP L FLR+LGFV
Sbjct: 121 LLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFV 180

Query: 181 GFNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPK 240
           G NAITCQTTMLLVSS+EHTLLPKI+YLESLG SHKDVVNMVLRSPGLLTYSIQNNLVPK
Sbjct: 181 GLNAITCQTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPK 240

Query: 241 VDYFLVDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSR 300
           VDYFL DMKGDLLELKRFPQYFSFSLE+KIKPRHRLLVEHGLSLSLS+MLKVSDGEFT+R
Sbjct: 241 VDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR 300

Query: 301 LIEMRLQSLTADG 308
           +IEMRLQS TADG
Sbjct: 301 VIEMRLQSATADG 313

[Close]

BLAST of Lag0040124 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 305.8 bits (782), Expect = 5.4e-82
Identity = 156/255 (61.18%), Postives = 203/255 (79.61%), Query Frame = 0


Query: 49  SDSGLLFRQKILYLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRV 108
           SD+G+LFR+K++YL++ L+VD  KA R NP  RSA +S++ SVE  LSS GL   AVGR+
Sbjct: 27  SDTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRI 86

Query: 109 LDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFL 168
           LDM+P LLTSDP+ ++ P+  FL NE+ I   DI KSI RCPR+L+S +D QLRPAL FL
Sbjct: 87  LDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFL 146

Query: 169 RDLGFVGFNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSHKDVVNMVLRSPGLLTYSI 228
           + LGFVG + IT + T+LLVS+VE TL+PKI+YL E LG + ++V  MV+RSP LLTYS+
Sbjct: 147 KTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSV 206

Query: 229 QNNLVPKVDYFLVDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVS 288
            NNLVPKV++F+ +M+GD+ ELKRFPQYFSFSLE+KIKPRHRLL EHG+ + LS+MLKVS
Sbjct: 207 DNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVS 266

Query: 289 DGEFTSRLIEMRLQS 303
           DG+F   L+E+RL+S
Sbjct: 267 DGQFNHWLLELRLRS 280

[Close]

BLAST of Lag0040124 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.8e-19
Identity = 61/211 (28.91%), Postives = 112/211 (53.08%), Query Frame = 0


Query: 67  HVDFRKAFRENPDSRSATL-SALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLY 126
           H D ++     P     T+ + LK+    L  +G+  S +G+++   P L +   +  L 
Sbjct: 233 HRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLR 292

Query: 127 PIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFL-RDLGFVGFNAITC--Q 186
           P   +L+ EV I   D+ K +   P+ILV  LD+       FL ++LG    + +    +
Sbjct: 293 PTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKK 352

Query: 187 TTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLVDM 246
              LL  S++   LP+I +L S+G+ + D++ ++     +L+ S+++NL PK  Y + ++
Sbjct: 353 HPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNEL 412

Query: 247 KGDLLELKRFPQYFSFSLEKKIKPRHRLLVE 274
             ++  L ++P Y S SL+++I+PRHR LVE
Sbjct: 413 NNEVHILTKYPMYLSLSLDQRIRPRHRFLVE 443

[Close]

BLAST of Lag0040124 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.6e-17
Identity = 62/220 (28.18%), Postives = 117/220 (53.18%), Query Frame = 0


Query: 88  LKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSII 147
           LK     L ++G++ +   +++  +P +LT      L    +F L++  +    I + + 
Sbjct: 268 LKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQ-KLTSTVEF-LSQTGLTEEQIGRILT 327

Query: 148 RCPRILVSDLDLQLRPALKFLRDLGF-VGFNAITCQTTMLLVSSVEHTLLPKIQYLESLG 207
           RCP I+   ++ +LRP +++ R L   V      C  T  L  S+E  L P  ++    G
Sbjct: 328 RCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGL--SIESNLKPVTEFFLEKG 387

Query: 208 LSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLVDMKGDLLELKRFPQYFSFSLEKKIKP 267
               ++  M+ R   L T+S++ N++PK DYF   M     EL +FPQ+F +SL+++IKP
Sbjct: 388 FGLDEIGIMISRYGALYTFSLKENVMPKWDYFQT-MDYPKSELVKFPQFFGYSLQERIKP 447

Query: 268 RHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTAD 307
           R+ L+   G+ L L+++L +S  EF  ++++ ++  L ++
Sbjct: 448 RYELVQRSGVRLLLNQVLSLSGIEF-EKVVKKKMMKLVSN 481

[Close]

BLAST of Lag0040124 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-16
Identity = 63/201 (31.34%), Postives = 102/201 (50.75%), Query Frame = 0


Query: 98  MGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDL 157
           +G+    + R+L + P L   D +  + P   F L E+ IP   I   +++ P +L + L
Sbjct: 398 LGIPKEGMKRILVVKPILYCIDLEKTIAPKVRF-LQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 158 DLQLRPALKFLRDLGFV---GFNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVN 217
             ++RP + FL     V       +      LL  S+   L P ++Y  SLG+    +  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 218 MVLRSPGLLTYSIQNNLVPKVDYFLVDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEH 277
           M+   P LL Y++ +NL PK  Y    M   L +L  FP++FS+SLE++I PRH ++VE+
Sbjct: 518 MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVEN 577

Query: 278 GLSLSLSKMLKVSDGEFTSRL 296
            ++  L  ML  +D EF  R+
Sbjct: 578 RVNFKLRYMLACTDEEFERRV 596

[Close]

BLAST of Lag0040124 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.0e-11
Identity = 60/220 (27.27%), Postives = 100/220 (45.45%), Query Frame = 0


Query: 88  LKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYP----IFDFLLNEVQIPFPDIR 147
           +K +   L  +G+   A  R+++  P +L  + D  + P    + DF + E  +P     
Sbjct: 287 IKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLP----- 346

Query: 148 KSIIRCPRILVSDLDLQLRPALKFL--------RDLGFVGFNAITCQTTMLLVSSVEHTL 207
             I + P I+  DL  +L    K L         DLG +       +     VS  E  +
Sbjct: 347 SIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSL------IERMPQFVSLSESPM 406

Query: 208 LPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLVDMKGDLLELKRFPQY 267
           L  I +L   G S      MV+  P +L  ++   +    +YF  +MK  L +L  FP +
Sbjct: 407 LKHIDFLTKCGFSIDQTREMVIGCPQVLALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAF 466

Query: 268 FSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRL 296
           F++ LE  +KPRH+ +++ G+  SL+ ML  SD +F  R+
Sbjct: 467 FTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKFEQRM 494

[Close]

BLAST of Lag0040124 vs. ExPASy TrEMBL
Match: A0A6J1G0M2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449597 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.1e-151
Identity = 278/307 (90.55%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1   MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKIL 60
           M+S++Q  PPW  FLFPR SAPSL  LRNPNFRKPRFT+SLNSQFS HSD+GLLFRQKIL
Sbjct: 1   MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 61  YLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120
           YLENHL+VDFRKAFRENPDSRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP
Sbjct: 61  YLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLV 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSHKDVVNMVLRSP LLTYSIQNNLVPKVDYFL 
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRL 300
           DMKGDL EL+RFPQYFSFSLE+KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTADG 308
           QS TADG
Sbjct: 301 QSSTADG 307

[Close]

BLAST of Lag0040124 vs. ExPASy TrEMBL
Match: A0A6J1HTW2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467425 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.3e-150
Identity = 276/307 (89.90%), Postives = 290/307 (94.46%), Query Frame = 0


Query: 1   MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKIL 60
           MIS++Q  PP   FLFPR S PSL  +RNPNFRKPRFT+SLNSQFS HSD+GL FRQKIL
Sbjct: 1   MISRVQNLPPCNRFLFPRSSTPSLNPMRNPNFRKPRFTISLNSQFSDHSDAGLHFRQKIL 60

Query: 61  YLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120
           YLENHLHVDFRKAFRENPDSRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLV 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSHKDVVNMVLRSP LLTYSIQNNLVPKVDYFL 
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRL 300
           DMKGDL EL+RFPQYFSFSLE+KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRL
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTADG 308
           QS TADG
Sbjct: 301 QSSTADG 307

[Close]

BLAST of Lag0040124 vs. ExPASy TrEMBL
Match: A0A6J1DAK3 (transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019187 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.5e-146
Identity = 271/313 (86.58%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MISKIQVPPPWIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYH------SDSGLL 60
           MIS++Q PPP I  LFPR S PSLK   NPNFR PRFTV++N+QFS H      SDSG+L
Sbjct: 1   MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGIL 60

Query: 61  FRQKILYLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQ 120
           FR+KILYLENHLHVD RKAF++NPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQ
Sbjct: 61  FREKILYLENHLHVDSRKAFQQNPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQ 120

Query: 121 LLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFV 180
           LLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSIIRCPRILVSDLDLQLRP L FLR+LGFV
Sbjct: 121 LLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFV 180

Query: 181 GFNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPK 240
           G NAITCQTTMLLVSS+EHTLLPKI+YLESLG SHKDVVNMVLRSPGLLTYSIQNNLVPK
Sbjct: 181 GLNAITCQTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPK 240

Query: 241 VDYFLVDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSR 300
           VDYFL DMKGDLLELKRFPQYFSFSLE+KIKPRHRLLVEHGLSLSLS+MLKVSDGEFT+R
Sbjct: 241 VDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR 300

Query: 301 LIEMRLQSLTADG 308
           +IEMRLQS TADG
Sbjct: 301 VIEMRLQSATADG 313

[Close]

BLAST of Lag0040124 vs. ExPASy TrEMBL
Match: A0A5D3D1U5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00330 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 8.2e-134
Identity = 253/307 (82.41%), Postives = 276/307 (89.90%), Query Frame = 0


Query: 1   MISKIQVPPP-WIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKI 60
           MIS++Q+PPP    F FP   A SLK L+NP+F KPRFT+SLN+QFS  SDSGLLFR+KI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSD 120
           LYLENHL+VD RKAFRENP  RSA+LS LKSVEVCLSSMGL+ SAVGRVLDMYP+LLTS+
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAI 180
           PDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVG  AI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFL 240
           TCQTT+LLVS+VEHTLLPKIQ+LESLGLSH+DVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 VDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMR 300
            DMKGDLLELK FPQYFSF+LE+KIKPRHR LVEHGLSL LSKMLKVSDGEF + L EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 LQSLTAD 307
            +SL AD
Sbjct: 301 CRSLMAD 307

[Close]

BLAST of Lag0040124 vs. ExPASy TrEMBL
Match: A0A1S3BFK9 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489133 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 8.2e-134
Identity = 253/307 (82.41%), Postives = 276/307 (89.90%), Query Frame = 0


Query: 1   MISKIQVPPP-WIPFLFPRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKI 60
           MIS++Q+PPP    F FP   A SLK L+NP+F KPRFT+SLN+QFS  SDSGLLFR+KI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSD 120
           LYLENHL+VD RKAFRENP  RSA+LS LKSVEVCLSSMGL+ SAVGRVLDMYP+LLTS+
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAI 180
           PDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVG  AI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFL 240
           TCQTT+LLVS+VEHTLLPKIQ+LESLGLSH+DVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 VDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMR 300
            DMKGDLLELK FPQYFSF+LE+KIKPRHR LVEHGLSL LSKMLKVSDGEF + L EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 LQSLTAD 307
            +SL AD
Sbjct: 301 CRSLMAD 307

[Close]

BLAST of Lag0040124 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 305.8 bits (782), Expect = 3.8e-83
Identity = 156/255 (61.18%), Postives = 203/255 (79.61%), Query Frame = 0


Query: 49  SDSGLLFRQKILYLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRV 108
           SD+G+LFR+K++YL++ L+VD  KA R NP  RSA +S++ SVE  LSS GL   AVGR+
Sbjct: 26  SDTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRI 85

Query: 109 LDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFL 168
           LDM+P LLTSDP+ ++ P+  FL NE+ I   DI KSI RCPR+L+S +D QLRPAL FL
Sbjct: 86  LDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFL 145

Query: 169 RDLGFVGFNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSHKDVVNMVLRSPGLLTYSI 228
           + LGFVG + IT + T+LLVS+VE TL+PKI+YL E LG + ++V  MV+RSP LLTYS+
Sbjct: 146 KTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSV 205

Query: 229 QNNLVPKVDYFLVDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVS 288
            NNLVPKV++F+ +M+GD+ ELKRFPQYFSFSLE+KIKPRHRLL EHG+ + LS+MLKVS
Sbjct: 206 DNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVS 265

Query: 289 DGEFTSRLIEMRLQS 303
           DG+F   L+E+RL+S
Sbjct: 266 DGQFNHWLLELRLRS 279

[Close]

BLAST of Lag0040124 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 214.9 bits (546), Expect = 8.9e-56
Identity = 117/243 (48.15%), Postives = 164/243 (67.49%), Query Frame = 0


Query: 53  LLFRQKILYLENHLHVDFRKAFRENPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMY 112
           L  ++KIL LE  + +D  KA   NP   SA L +++SV   L S G+  + + R+L M 
Sbjct: 53  LQMKEKILCLE-LMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMC 112

Query: 113 PQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLG 172
           P++LTSD   +LYP+F FL N++ +P    R+ I +CPR+L+S ++ QL+PAL +L+ LG
Sbjct: 113 PKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLG 172

Query: 173 FVGFNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLV 232
                A+  Q  +LLVSSVEHTL+PK+++LES+G S  + + M+LR P L T+SI+NN  
Sbjct: 173 LKDLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFK 232

Query: 233 PKVDYFLVDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFT 292
           PK+DYF+ ++KG L  LK FPQYF+FSLEK+IKPRH   +E GL L LS MLK +D EF 
Sbjct: 233 PKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFE 292

Query: 293 SRL 296
             L
Sbjct: 293 QLL 294

[Close]

BLAST of Lag0040124 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-35
Identity = 98/282 (34.75%), Postives = 147/282 (52.13%), Query Frame = 0


Query: 17  PRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKILYLENHLHVDFRKAFRE 76
           P  S+ S    ++P+      T +  +       S     +K++YL++ L +DF      
Sbjct: 38  PNTSSSSSSFFKSPDIPSLSSTTTTTTTTETLESS---IHEKLIYLDS-LGIDFLTLINR 97

Query: 77  NPDSRSATLSALKSVEVCLSS--MGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNE 136
           +P   S  LSA++SV   +++  +   L    R++ M P+LLTS       P+  FLL E
Sbjct: 98  HPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLRE 157

Query: 137 VQI-PFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAITCQTTMLLVSSVEH 196
           V +    D+R+++ R PR+L   +D QLRP L FL+ +G +  +    + T LL  SV++
Sbjct: 158 VGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPH----KHTYLLSCSVDN 217

Query: 197 TLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLVDMKGDLLELKRFP 256
            L+P+I Y E LG S +    M  R P L  YSI  N  PK+ Y +V+M  D+ E+  FP
Sbjct: 218 KLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFP 277

Query: 257 QYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRL 296
           QYFSFSLE +IKPRH      G+   L  MLK ++  F   L
Sbjct: 278 QYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTL 311

[Close]

BLAST of Lag0040124 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-35
Identity = 98/282 (34.75%), Postives = 147/282 (52.13%), Query Frame = 0


Query: 17  PRFSAPSLKLLRNPNFRKPRFTVSLNSQFSYHSDSGLLFRQKILYLENHLHVDFRKAFRE 76
           P  S+ S    ++P+      T +  +       S     +K++YL++ L +DF      
Sbjct: 38  PNTSSSSSSFFKSPDIPSLSSTTTTTTTTETLESS---IHEKLIYLDS-LGIDFLTLINR 97

Query: 77  NPDSRSATLSALKSVEVCLSS--MGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNE 136
           +P   S  LSA++SV   +++  +   L    R++ M P+LLTS       P+  FLL E
Sbjct: 98  HPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLRE 157

Query: 137 VQI-PFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGFNAITCQTTMLLVSSVEH 196
           V +    D+R+++ R PR+L   +D QLRP L FL+ +G +  +    + T LL  SV++
Sbjct: 158 VGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPH----KHTYLLSCSVDN 217

Query: 197 TLLPKIQYLESLGLSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLVDMKGDLLELKRFP 256
            L+P+I Y E LG S +    M  R P L  YSI  N  PK+ Y +V+M  D+ E+  FP
Sbjct: 218 KLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFP 277

Query: 257 QYFSFSLEKKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRL 296
           QYFSFSLE +IKPRH      G+   L  MLK ++  F   L
Sbjct: 278 QYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTL 311

[Close]

BLAST of Lag0040124 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.0 bits (341), Expect = 5.2e-32
Identity = 90/260 (34.62%), Postives = 143/260 (55.00%), Query Frame = 0


Query: 40  SLNSQFSYHSDSGLLFRQKILYLENHLHVDFRKAFRENP--DSRSATLSALKSVEVCLSS 99
           S +S  S  S   L  + +  + EN  H+       +NP     +  LS + S    L S
Sbjct: 15  SFSSPPSPSSSKPLYLKFQTSHRENLRHLSSLGIVPQNPRLAPPANDLSVILSAVNLLKS 74

Query: 100 MGLELSAVGRVLDMYPQLLTSDPDYD---LYPIFDFLLNEVQIPFPDIRKSIIRCPRILV 159
            G+      R++ + PQL +  P +D   L P+FDFL  E+     + R  I+ CP IL 
Sbjct: 75  KGISDEDFPRLVFLCPQLFS--PTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILF 134

Query: 160 SDLDLQLRPALKFLRDLGFVGFNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHKDVVN 219
           SD++  LRP L +L++LG    N  +     +L + VE  L  K+++L+S+G  H++   
Sbjct: 135 SDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVE-KLRAKMRFLKSIGFEHEEAAR 194

Query: 220 MVLRSPGLLTYSIQNNLVPKVDYFLVDMKGDLLELKRFPQYFSFSLEKKIKPRHRLLVEH 279
           +  R P +  YS+++NL PK ++ + DM+ +L ELK+FPQYF+FSL K+I+PRH  L + 
Sbjct: 195 VCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKK 254

Query: 280 GLSLSLSKMLKVSDGEFTSR 295
            + +SLS+ML   D +F S+
Sbjct: 255 NVRVSLSRMLMWGDQKFYSK 271

The following BLAST results are available for this feature:

BLAST of Lag0040124 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542512.1	1.5e-153	91.53	transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pep...	[more]
KAG7013135.1	1.6e-152	91.21	Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma su...	[more]
XP_022945324.1	2.4e-151	90.55	transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_0...	[more]
XP_022968085.1	1.3e-149	89.90	transcription termination factor MTEF1, chloroplastic [Cucurbita maxima] >XP_022...	[more]
XP_022151208.1	1.1e-145	86.58	transcription termination factor MTEF1, chloroplastic [Momordica charantia] >XP_...	[more]

BLAST of Lag0040124 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X53	5.4e-82	61.18	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9FM80	3.8e-19	28.91	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	3.6e-17	28.18	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	5.1e-16	31.34	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	5.0e-11	27.27	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Lag0040124 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0M2	1.1e-151	90.55	transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3...	[more]
A0A6J1HTW2	6.3e-150	89.90	transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366...	[more]
A0A6J1DAK3	5.5e-146	86.58	transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=...	[more]
A0A5D3D1U5	8.2e-134	82.41	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BFK9	8.2e-134	82.41	transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Lag0040124 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03050.1	3.8e-83	61.18	Mitochondrial transcription termination factor family protein	[more]
AT2G34620.1	8.9e-56	48.15	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.1	1.7e-35	34.75	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.2	1.7e-35	34.75	Mitochondrial transcription termination factor family protein	[more]
AT3G18870.1	5.2e-32	34.62	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 143..174 e-value: 9.6E-4 score: 28.4 coord: 246..277 e-value: 1.1E-5 score: 34.9 coord: 177..208 e-value: 0.54 score: 19.3 coord: 106..138 e-value: 5.4 score: 16.0 coord: 213..245 e-value: 0.019 score: 24.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 141..291 e-value: 5.8E-30 score: 104.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 36..303
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 69..304 e-value: 9.1E-47 score: 161.4
None	No IPR available	PANTHER	PTHR13068:SF36	TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC	coord: 36..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040124.1	Lag0040124.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding