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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTGGATTGGCGTCAAAACGGCAGAGGGATGAAGCCGAAATTGAAGAAATGAAGGAAGGGGAAGAGGTAAAGCGGCAAAAATCATACAACCAAATAGTGTCCCTGTTGGAGGAAGAGGAAGAGGAAGCCATTGAGGATCTGTCGTCAATCATGAGCACACTCCAACAAGAAATCTCAATCTCAATCTCGTCGGGTTCTCCAAAACAGAGCAGCGAAGAGAAGGGCAGGGACAGGGACAGGGACGAGTGTGCATCGAACTTTGGTTCAAGTTGTTGTTCGTCGATGAAGGAAATGGAGGAAGAAGGGGAGAGAGAGAGAGTGATGAGACATCTTCTGGAAGCTTCGGATGACGAGCTGGGGATTCCGAATGGAGAGTTTGTGGTGGGTGTGGGTGAAGGATTGGATGGAGTGGCCTTGTGTGATGCCTTGTGGGAATTGGAAGATGAGGCTGCTAATTACTACACTTTGTTTCAGTCTCAGCTTTTTATGTAG mRNA sequence ATGGCTGGATTGGCGTCAAAACGGCAGAGGGATGAAGCCGAAATTGAAGAAATGAAGGAAGGGGAAGAGGTAAAGCGGCAAAAATCATACAACCAAATAGTGTCCCTGTTGGAGGAAGAGGAAGAGGAAGCCATTGAGGATCTGTCGTCAATCATGAGCACACTCCAACAAGAAATCTCAATCTCAATCTCGTCGGGTTCTCCAAAACAGAGCAGCGAAGAGAAGGGCAGGGACAGGGACAGGGACGAGTGTGCATCGAACTTTGGTTCAAGTTGTTGTTCGTCGATGAAGGAAATGGAGGAAGAAGGGGAGAGAGAGAGAGTGATGAGACATCTTCTGGAAGCTTCGGATGACGAGCTGGGGATTCCGAATGGAGAGTTTGTGGTGGGTGTGGGTGAAGGATTGGATGGAGTGGCCTTGTGTGATGCCTTGTGGGAATTGGAAGATGAGGCTGCTAATTACTACACTTTGTTTCAGTCTCAGCTTTTTATGTAG Coding sequence (CDS) ATGGCTGGATTGGCGTCAAAACGGCAGAGGGATGAAGCCGAAATTGAAGAAATGAAGGAAGGGGAAGAGGTAAAGCGGCAAAAATCATACAACCAAATAGTGTCCCTGTTGGAGGAAGAGGAAGAGGAAGCCATTGAGGATCTGTCGTCAATCATGAGCACACTCCAACAAGAAATCTCAATCTCAATCTCGTCGGGTTCTCCAAAACAGAGCAGCGAAGAGAAGGGCAGGGACAGGGACAGGGACGAGTGTGCATCGAACTTTGGTTCAAGTTGTTGTTCGTCGATGAAGGAAATGGAGGAAGAAGGGGAGAGAGAGAGAGTGATGAGACATCTTCTGGAAGCTTCGGATGACGAGCTGGGGATTCCGAATGGAGAGTTTGTGGTGGGTGTGGGTGAAGGATTGGATGGAGTGGCCTTGTGTGATGCCTTGTGGGAATTGGAAGATGAGGCTGCTAATTACTACACTTTGTTTCAGTCTCAGCTTTTTATGTAG Protein sequence MAGLASKRQRDEAEIEEMKEGEEVKRQKSYNQIVSLLEEEEEEAIEDLSSIMSTLQQEISISISSGSPKQSSEEKGRDRDRDECASNFGSSCCSSMKEMEEEGERERVMRHLLEASDDELGIPNGEFVVGVGEGLDGVALCDALWELEDEAANYYTLFQSQLFM
Homology
BLAST of Lag0040102 vs. NCBI nr
Match: XP_022987613.1 (uncharacterized protein LOC111485117 [Cucurbita maxima]) HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46 Identity = 121/185 (65.41%), Postives = 137/185 (74.05%), Query Frame = 0
Query: 4 LASKRQRDEAEIEEMKEGEEVKRQKSYNQIVSLLEEEEEEAIEDLSSIMSTLQQEISISI 63
+ASKRQRDEA++EEM EGEE+KRQKSYNQI+SLLEEEEEEA+EDLSSI+S+LQQEIS S
Sbjct: 1 MASKRQRDEAQMEEMSEGEEIKRQKSYNQILSLLEEEEEEAVEDLSSIISSLQQEISSSS 60
Query: 64 SSGS-----------------PKQSSEEKGRDRDR---DECAS--NFGSSCCSSMKEMEE 123
SS S KQ++ +K + EC S ++ S CC S + E
Sbjct: 61 SSSSSFFSSSSSPCSTKWHPISKQNNTQKAEMEEEAATAECGSVEDYASCCCCSSSSVNE 120
Query: 124 E--GERERVMRHLLEASDDELGIPNGEFVVGVGEGLDGVALCDALWELEDEAANYYTLFQ 165
E GERERVMRHLLEASDDELGIPN EFV VGEG+DGVALCDALWELEDEAANYYTLF
Sbjct: 121 EEGGERERVMRHLLEASDDELGIPNSEFV--VGEGVDGVALCDALWELEDEAANYYTLFH 180
BLAST of Lag0040102 vs. NCBI nr
Match: XP_022957279.1 (uncharacterized protein LOC111458717 [Cucurbita moschata]) HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46 Identity = 120/180 (66.67%), Postives = 138/180 (76.67%), Query Frame = 0
Query: 4 LASKRQRDEAEIEEMKEGEEVKRQKSYNQIVSLLEEEEEEAIEDLSSIMSTLQQEISISI 63
+ASKRQRDEA++EEM EGEE+KRQKSY+QI+SLLEEEEEEA+EDLSSI+S+LQQEIS S
Sbjct: 1 MASKRQRDEAQMEEMSEGEELKRQKSYDQILSLLEEEEEEAVEDLSSIISSLQQEISSSS 60
Query: 64 SSGS------------PKQSSEEKGRDRD---RDECAS--NFGSSCCSSMKEMEEE--GE 123
SS S KQ++ +K + EC S ++ S CCSS + EE GE
Sbjct: 61 SSSSSSSPCSTKWHPISKQNNTQKAEMEEAAASAECGSVKDYASCCCSSSSSVNEEEGGE 120
Query: 124 RERVMRHLLEASDDELGIPNGEFVVGVGEGLDGVALCDALWELEDEAANYYTLFQSQLFM 165
RERVMRHLLEASDDELGIPN EFV VGEG+DGVALCDALWELEDEAANYYTLF SQLF+
Sbjct: 121 RERVMRHLLEASDDELGIPNSEFV--VGEGMDGVALCDALWELEDEAANYYTLFHSQLFV 178
BLAST of Lag0040102 vs. NCBI nr
Match: KAG7032206.1 (hypothetical protein SDJN02_06249, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195.3 bits (495), Expect = 4.2e-46 Identity = 119/178 (66.85%), Postives = 137/178 (76.97%), Query Frame = 0
Query: 4 LASKRQRDEAEIEEMKEGEEVKRQKSYNQIVSLLEEEEEEAIEDLSSIMSTLQQEISISI 63
+ASKRQRDEA++EEM EGEE+KRQKSY+QI+SLLEEEEEEA+EDLSSI+S+LQQEIS S
Sbjct: 1 MASKRQRDEAQMEEMSEGEELKRQKSYDQILSLLEEEEEEAVEDLSSIISSLQQEISSSS 60
Query: 64 SSGS----------PKQSSEEKGRDRD---RDECAS--NFGSSCCSSMKEMEEE--GERE 123
SS S KQ++ +K + EC S ++ S CC S + EE GERE
Sbjct: 61 SSSSSPCSTKWHPISKQTNTQKAEMEEAAASAECGSVEDYASCCCCSSSSVNEEEGGERE 120
Query: 124 RVMRHLLEASDDELGIPNGEFVVGVGEGLDGVALCDALWELEDEAANYYTLFQSQLFM 165
RVMRHLLEASDDELGIPN EF+ VGEG+DGVALCDALWELEDEAANYYTLF SQLFM
Sbjct: 121 RVMRHLLEASDDELGIPNSEFM--VGEGVDGVALCDALWELEDEAANYYTLFHSQLFM 176
BLAST of Lag0040102 vs. NCBI nr
Match: KAG6601423.1 (hypothetical protein SDJN03_06656, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194.9 bits (494), Expect = 5.5e-46 Identity = 119/175 (68.00%), Postives = 136/175 (77.71%), Query Frame = 0
Query: 4 LASKRQRDEAEIEEMKEGEEVKRQKSYNQIVSLLEEEEEEAIEDLSSIMSTLQQEISISI 63
+ASKRQRDEA++EEM EGEE+KRQKSY+QI+SLLEEEEEEA+EDLSSI+S+LQQEIS S
Sbjct: 1 MASKRQRDEAQMEEMSEGEELKRQKSYDQILSLLEEEEEEAVEDLSSIISSLQQEISSSS 60
Query: 64 SSGS-------PKQSSEEKGRDRD---RDECAS--NFGSSCCSSMKEMEEE--GERERVM 123
SS KQ++ +K + EC S ++ S CC S + EE GERERVM
Sbjct: 61 SSPCSTKWHPISKQNNTQKAEMEEAAASAECGSVKDYASCCCCSSSSVNEEEGGERERVM 120
Query: 124 RHLLEASDDELGIPNGEFVVGVGEGLDGVALCDALWELEDEAANYYTLFQSQLFM 165
RHLLEASDDELGIPN EFV VGEG+DGVALCDALWELEDEAANYYTLF SQLFM
Sbjct: 121 RHLLEASDDELGIPNSEFV--VGEGVDGVALCDALWELEDEAANYYTLFHSQLFM 173
BLAST of Lag0040102 vs. NCBI nr
Match: XP_023551025.1 (uncharacterized protein LOC111808979 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45 Identity = 118/181 (65.19%), Postives = 138/181 (76.24%), Query Frame = 0
Query: 4 LASKRQRDEAEIEEMKEGEEVKRQKSYNQIVSLLEEEEEEAIEDLSSIMSTLQQEISISI 63
+ASKRQRDEA++EEM EGEE+KRQKSY+QI+SLLEEEEEEA+EDLSSI+S+LQ+EIS S
Sbjct: 1 MASKRQRDEAQMEEMSEGEELKRQKSYDQILSLLEEEEEEAVEDLSSIISSLQEEISSSS 60
Query: 64 SSGS-------------PKQSSEEKGRDRD---RDECAS--NFGSSCCSSMKEMEEE--G 123
SS S KQ++ ++ + EC S ++GS CCSS + EE G
Sbjct: 61 SSSSSSSSPCSTKWHPISKQNNTQQAEMEEAAASAECGSVEDYGSCCCSSSSSVNEEEGG 120
Query: 124 ERERVMRHLLEASDDELGIPNGEFVVGVGEGLDGVALCDALWELEDEAANYYTLFQSQLF 165
ERERVMRHLLEASDDELGIPN EF+ V EG+DGVALCDALWELEDEAANYYTLF SQLF
Sbjct: 121 ERERVMRHLLEASDDELGIPNSEFM--VSEGVDGVALCDALWELEDEAANYYTLFHSQLF 179
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022987613.1 | 1.4e-46 | 65.41 | uncharacterized protein LOC111485117 [Cucurbita maxima] | [more] |
| XP_022957279.1 | 1.9e-46 | 66.67 | uncharacterized protein LOC111458717 [Cucurbita moschata] | [more] |
| KAG7032206.1 | 4.2e-46 | 66.85 | hypothetical protein SDJN02_06249, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6601423.1 | 5.5e-46 | 68.00 | hypothetical protein SDJN03_06656, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023551025.1 | 1.6e-45 | 65.19 | uncharacterized protein LOC111808979 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 38..58 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..28 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 59..106 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 71..85 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 7..27 |
| None | No IPR available | PANTHER | PTHR34539:SF3 | BNACNNG70820D PROTEIN | coord: 1..164 |
| None | No IPR available | PANTHER | PTHR34539 | T6J4.11 PROTEIN | coord: 1..164 |
Relationships
The following mRNA feature(s) are a part of this gene:
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