Lag0040000 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040000
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	pre-mRNA-processing factor 17-like
Location	chr13: 1406720 .. 1409460 (+)
RNA-Seq Expression	Lag0040000
Synteny	Lag0040000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTCTTCAGTCGTACACAGATCAAAACGGCGAAGATGGAAGCCCTAAACAGCTTACATCTTCGCCAGAAGCCTCTCCGCCTCGGCTCCTCCCTTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTAGCCCTCACGGTGGCCAACGCCAACCAGACGCTCTCGAAACCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACCTACGACCAACTCTGGGCGCCAATTTACGGCCCTTCTCATCCGTATGCGAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAACCATTTGTGTTCGATGAGCAGTACAACACTTTCCATAAATATGGATATGCTGCCGACCCCTCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAGGCTTTACAGAAGAACGATGCCATCTCCGTGTATAACATTCCACAACACGAGCAGAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAGAATGAGGATGTGGAAATGGATTTGAACCCGGCTGAAGTTGATAATCCAGCAACTGACGTGTGGTTGATGAAGAATAGGAAGAGTCCATGGTCTGGAAAGAAGGAAGGTTTGCAAACCGAGCTCACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCGGATAAGAGTACTTTTCATGGTAAAGAAGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCAAAGGATGCCAAGGCCACAAACGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGGTTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCCGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCACAGGCGGTTCGGGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAAAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAATGGGATATGAACACAGGACAGATTACTCAAGAATACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACATCAAGTGATGATAAGTCACTCCGTGTTTGGGAATTTGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCACATGCATTCCATGCCCTCCATATCCGTACACCCCAATACGAATTGGCTTGCTGCCCAAAGTTTAGACAATCAAATTCTTATTTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAAAAGAGGTTTGCTGGCCACATTGTGGCAGGATATGCTTGTCAGGTCAATTTTTCACCAGATGGACGTTTTGTTATGTCCGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACTTGCAAGGTATTCAGAACTCTCAAGTGTCATGAAGGAGTATGCATTGGGTGTGAGTGGCACCCCTTGGAGCAAAGTAAAGTGGCAACGTGTGGCTGGGATGGCCTGATAAAGTATTGGTAAGTAAATCCCTTTACCTTGGTGTGATTCTTTAGGATATATTGTTATAAACTTTTAACTCGTGTTTCTTTTACCCTTCTGTATGATATGTTTCTTTTAAATAGTTCTGCAATGAGGGTCAAATATTTGTTAAATTTGGGTTTCTGCTAACATGTGGTGTTCTTTATAACTCTTTGTATGTGATCTTCTGATTGACTTAACTCTTTAGTATTTGACTGCAACCTTAGTTACCCTCCCCATGCATGTTAAATTTTGTTCATTAGACCGTGGCATGAAAACGTTTGCTTGAAGATTTCAGGTTATTTTTGTTGTTTTCAAGAACTACCTTAGCTGTTCATAGGATTTCATACGAGTAAAGCTGTGGAGGAGGCTGACTGCATGCTTTTTTCTGTTAATGAATCCATTGCTCTACAATTGTTGAAGAAATTTCATATTGTGGCAATTACCTTCATGTCTTTTTGCAACTGCAAAGGCGGGAACCTAATGATAGTTTTGCCTTTGTAGTTATGACCGAATCTCAGGTATAAAAACCTAATGGTTTTGCCAATATCTTTTAGTTGGTTATCACGATTGTGGTCTTGGGACTTTGTAGTGCTTAGCGGGTTTTCTTTCTTTCTGACACGTCCTGCCTTTTGATGATGTGGTTCTTGGATTTTGTTCATGCTGCTAAATTTTGATTCCTCGATACTAAAAATTGTGTTATTTCACATTTTCGAACTGTAGCTGTAGGTAAGATATGGATCATTGTGGATGGTTTTCTTAGTCAATTTAAGTTGCCATGGCCATTGTTATTTTTCATTTATCTATAATGTAACAGTTTGTGTGCACTGTCATGCGTTGTTGCAATCAGTTCTCATTGTTATTTTGGTGACGAACAATGCATCTTTATGAATTGATTGACACATGATTGTATGAGACTTTTGGGTAGAAGTTCATCTATTGAGAATAGTTGTGGAATGATCTTTGTTCTGCTCTTGCAGGGACTAGATTCGAGCTTTTGA

mRNA sequence

ATGGATCTTCTTCAGTCGTACACAGATCAAAACGGCGAAGATGGAAGCCCTAAACAGCTTACATCTTCGCCAGAAGCCTCTCCGCCTCGGCTCCTCCCTTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTAGCCCTCACGGTGGCCAACGCCAACCAGACGCTCTCGAAACCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACCTACGACCAACTCTGGGCGCCAATTTACGGCCCTTCTCATCCGTATGCGAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAACCATTTGTGTTCGATGAGCAGTACAACACTTTCCATAAATATGGATATGCTGCCGACCCCTCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAGGCTTTACAGAAGAACGATGCCATCTCCGTGTATAACATTCCACAACACGAGCAGAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAGAATGAGGATGTGGAAATGGATTTGAACCCGGCTGAAGTTGATAATCCAGCAACTGACGTGTGGTTGATGAAGAATAGGAAGAGTCCATGGTCTGGAAAGAAGGAAGGTTTGCAAACCGAGCTCACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCGGATAAGAGTACTTTTCATGGTAAAGAAGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCAAAGGATGCCAAGGCCACAAACGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGGTTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCCGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCACAGGCGGTTCGGGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAAAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAATGGGATATGAACACAGGACAGATTACTCAAGAATACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACATCAAGTGATGATAAGTCACTCCGTGTTTGGGAATTTGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCACATGCATTCCATGCCCTCCATATCCGTACACCCCAATACGAATTGGCTTGCTGCCCAAAGTTTAGACAATCAAATTCTTATTTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAAAAGAGGTTTGCTGGCCACATTGTGGCAGGATATGCTTGTCAGGTCAATTTTTCACCAGATGGACGTTTTGTTATGTCCGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACTTGCAAGGTATTCAGAACTCTCAAGTGTCATGAAGGAGTATGCATTGGGTGTGAGTGGCACCCCTTGGAGCAAAGTAAAGTGGCAACGTGTGGCTGGGATGGCCTGATAAAGTATTGGCGGGAACCTAATGATAGTTTTGCCTTTGTAGTTATGACCGAATCTCAGGGACTAGATTCGAGCTTTTGA

Coding sequence (CDS)

ATGGATCTTCTTCAGTCGTACACAGATCAAAACGGCGAAGATGGAAGCCCTAAACAGCTTACATCTTCGCCAGAAGCCTCTCCGCCTCGGCTCCTCCCTTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTAGCCCTCACGGTGGCCAACGCCAACCAGACGCTCTCGAAACCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACCTACGACCAACTCTGGGCGCCAATTTACGGCCCTTCTCATCCGTATGCGAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAACCATTTGTGTTCGATGAGCAGTACAACACTTTCCATAAATATGGATATGCTGCCGACCCCTCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAGGCTTTACAGAAGAACGATGCCATCTCCGTGTATAACATTCCACAACACGAGCAGAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAGAATGAGGATGTGGAAATGGATTTGAACCCGGCTGAAGTTGATAATCCAGCAACTGACGTGTGGTTGATGAAGAATAGGAAGAGTCCATGGTCTGGAAAGAAGGAAGGTTTGCAAACCGAGCTCACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCGGATAAGAGTACTTTTCATGGTAAAGAAGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCAAAGGATGCCAAGGCCACAAACGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGGTTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCCGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCACAGGCGGTTCGGGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAAAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAATGGGATATGAACACAGGACAGATTACTCAAGAATACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACATCAAGTGATGATAAGTCACTCCGTGTTTGGGAATTTGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCACATGCATTCCATGCCCTCCATATCCGTACACCCCAATACGAATTGGCTTGCTGCCCAAAGTTTAGACAATCAAATTCTTATTTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAAAAGAGGTTTGCTGGCCACATTGTGGCAGGATATGCTTGTCAGGTCAATTTTTCACCAGATGGACGTTTTGTTATGTCCGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACTTGCAAGGTATTCAGAACTCTCAAGTGTCATGAAGGAGTATGCATTGGGTGTGAGTGGCACCCCTTGGAGCAAAGTAAAGTGGCAACGTGTGGCTGGGATGGCCTGATAAAGTATTGGCGGGAACCTAATGATAGTTTTGCCTTTGTAGTTATGACCGAATCTCAGGGACTAGATTCGAGCTTTTGA

Protein sequence

MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVEMDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWREPNDSFAFVVMTESQGLDSSF

Homology

[Close]

BLAST of Lag0040000 vs. NCBI nr
Match: XP_038893410.1 (pre-mRNA-processing factor 17 isoform X1 [Benincasa hispida])

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 575/580 (99.14%), Postives = 577/580 (99.48%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEM+ENEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMNENEDVE 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            DLN AEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EDLNTAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. NCBI nr
Match: XP_038893411.1 (pre-mRNA-processing factor 17 isoform X2 [Benincasa hispida])

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 575/580 (99.14%), Postives = 577/580 (99.48%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEM+ENEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMNENEDVE 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            DLN AEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EDLNTAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. NCBI nr
Match: XP_022966828.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 572/580 (98.62%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+EDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           MDLNPAEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. NCBI nr
Match: XP_008446212.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo] >KAA0034318.1 pre-mRNA-processing factor 17 isoform X2 [Cucumis melo var. makuwa] >TYK15602.1 pre-mRNA-processing factor 17 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 571/580 (98.45%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            ++NPAEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. NCBI nr
Match: XP_008446211.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo] >ADN33838.1 pre-mRNA splicing factor [Cucumis melo subsp. melo])

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 571/580 (98.45%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            ++NPAEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. ExPASy Swiss-Prot
Match: O60508 (Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 6.7e-153
Identity = 281/574 (48.95%), Postives = 372/574 (64.81%), Query Frame = 0


Query: 20  LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWA 79
           LT SP +S P L  +  SAP+V            +      +DP    V +NPTY+ ++A
Sbjct: 40  LTKSP-SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFA 99

Query: 80  PIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSA---SAG 139
           P +GP +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS       
Sbjct: 100 PEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVS 159

Query: 140 NNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVEMDLNPAEVDNPATDVW 199
             YIG +E  +KN  ++V+     E  ++K EK+K+  EN+   +D              
Sbjct: 160 AKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKENDASNID-------------- 219

Query: 200 LMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGEEKGGEKGEVTADKSTFHGK 259
                  PW+    ++ +     EEQK+  E  AK  KKG+++  + GE   +K+  H K
Sbjct: 220 ---GFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGE---EKTILHVK 279

Query: 260 EERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLI 319
           E  DYQGRS++  P+D      +    + CY+PK+ +H WSGHTKGVSA+R FP  GHL+
Sbjct: 280 EMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLL 339

Query: 320 LSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETG 379
           LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A YD+ +K WDTETG
Sbjct: 340 LSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETG 399

Query: 380 QVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTI 439
           Q IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I QEYD+HLGAVNTI
Sbjct: 400 QCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTI 459

Query: 440 TFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQ 499
            FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQ
Sbjct: 460 VFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQ 519

Query: 500 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFR 559
           ILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWKT K++ 
Sbjct: 520 ILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS 578

Query: 560 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
             K H+ VCIG  WHP E SKV TCGWDGLIK W
Sbjct: 580 RFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 578

[Close]

BLAST of Lag0040000 vs. ExPASy Swiss-Prot
Match: Q9DC48 (Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 1.3e-151
Identity = 283/588 (48.13%), Postives = 373/588 (63.44%), Query Frame = 0


Query: 15  GSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVA--NANQTLSKP-------IDPTQ 74
           GS     S     P     S     K     L+LTVA  +A +   K        +DP  
Sbjct: 17  GSESDSDSEGSRCPLPAADSLMHLTKSPSAKLSLTVAVDSAPEVAVKEDLETGVHLDPAV 76

Query: 75  HLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKY 134
             V +NPTY+ ++AP +GP +P+    +A   RN   G+ E A I  F+F++Q  TF  Y
Sbjct: 77  KEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATY 136

Query: 135 GYAADPSA---SAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVEMD 194
           GYA DPS         YIG +E  +KN  ++V+     E  ++K EK+K+  EN+   +D
Sbjct: 137 GYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKENDASNID 196

Query: 195 LNPAEVDNPATDVWLMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGEEKGGE 254
                                PW+    ++ +     EEQK+  E  AK  KKG+++  +
Sbjct: 197 -----------------GFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEK 256

Query: 255 KGEVTADKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKG 314
            GE   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WSGHTKG
Sbjct: 257 PGE---EKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKG 316

Query: 315 VSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA 374
           VSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A
Sbjct: 317 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA 376

Query: 375 GYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQI 434
            YD+ +K WDTETGQ IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I
Sbjct: 377 AYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEI 436

Query: 435 TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVH 494
            QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ 
Sbjct: 437 VQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLS 496

Query: 495 PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG 554
           PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG G
Sbjct: 497 PNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNG 556

Query: 555 KCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           K   WDWKT K++   K H+ VCIG  WHP E SKV TCGWDGLIK W
Sbjct: 557 KLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 578

[Close]

BLAST of Lag0040000 vs. ExPASy Swiss-Prot
Match: O43071 (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp17 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.0e-101
Identity = 218/593 (36.76%), Postives = 310/593 (52.28%), Query Frame = 0


Query: 14  DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPT 73
           D   ++ + SP   P  LL ++  AP V D        N    L          +A N  
Sbjct: 9   DSEEQENSQSPNIQP--LLHTENLAPAVVD--------NVKDDLIVSKGGNSRELARNVP 68

Query: 74  YDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSA 133
            +++  P  GP++P+        ++N   G+ E   +  FVF+++        Y A+  A
Sbjct: 69  VNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQE--------YYANTHA 128

Query: 134 SAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVEMDLNPAEVDNPAT 193
             G     D EA    D             KRK +K KE  E+       +P+ ++    
Sbjct: 129 IYGKRNFDDNEATTSTDL------------KRKSQKIKERREDPG-----DPSILEGDGA 188

Query: 194 DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEV----------- 253
                   K PW+G     Q+    E  +Y E  +     EK  E   +           
Sbjct: 189 -------YKGPWAGYGSE-QSSSPLEYSEYEEVESLDVKSEKDTESNNLGQNELLKEQLA 248

Query: 254 TADKSTFHGKEER--------DYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSG 313
           T +  T   KEE         DYQ RS++  P D       +     CYIPK+ + TW G
Sbjct: 249 TPEVETHRSKEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKG 308

Query: 314 HTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSK 373
           HTKG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  DG  
Sbjct: 309 HTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRS 368

Query: 374 FLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN 433
           FL+  +DK IK WDTE G+ ++ F++ ++   VK   D DK N  LAG +DK+I+Q+D+ 
Sbjct: 369 FLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIR 428

Query: 434 TGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS 493
           +  I Q YD HLG +N+ITF++N +RFVT+SDD S+R WE+G PV IK++++  MHSMP 
Sbjct: 429 SPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPR 488

Query: 494 ISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 553
           +++ PN   +A QSLDN I +YS  E+++ NKKK F G+  +GY+ +V FSPDGRFV SG
Sbjct: 489 VALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVFSG 548

Query: 554 DGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYW 581
           D  G   FWDWKTCK+   L  H G      +HP E SKVAT    DG IKYW
Sbjct: 549 DSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYW 557

[Close]

BLAST of Lag0040000 vs. ExPASy Swiss-Prot
Match: P40968 (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 3.8e-71
Identity = 144/458 (31.44%), Postives = 246/458 (53.71%), Query Frame = 0


Query: 130 DPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVEMDLNPAEVD 189
           D S+ +  N+       +K +  +++    +E     I K+K      +++      + D
Sbjct: 8   DTSSDSDLNFDEGKSVHEKKNG-NLHEDTSYEPSSNNIHKRKSHFTKSELKRRRKTRKGD 67

Query: 190 NPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTF 249
            P    W        WS   +   ++ +E QK+  + +     E+    +     + S F
Sbjct: 68  GP----W------GSWSSSDDE-TSQASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHF 127

Query: 250 HGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHG 309
           +GK E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F PK G
Sbjct: 128 YGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTG 187

Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDT 369
           HLILS G D  +KIWD ++  +C+R + GH++ ++ + F  D   FL++ +D+ +K WDT
Sbjct: 188 HLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDT 247

Query: 370 ETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQ---ITQEYDQHL 429
           ETG+V +       P  V+  P +  +   + G+S+ KI+ +D    +   + Q YD HL
Sbjct: 248 ETGKVKTRLHLNSTPADVESRPTNPHE--FIVGLSNSKILHYDDRVSENQGLVQTYDHHL 307

Query: 430 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 489
            ++  + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  A
Sbjct: 308 SSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCA 367

Query: 490 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 549
           QS+DN+I  +S + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW 
Sbjct: 368 QSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWN 427

Query: 550 TCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLI 578
           T ++   +K      I   +WHP E SKV   G  G I
Sbjct: 428 TSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKI 451

[Close]

BLAST of Lag0040000 vs. ExPASy Swiss-Prot
Match: E9Q349 (WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.3e-44
Identity = 95/313 (30.35%), Postives = 165/313 (52.72%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPK--HGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDGSKFLTAGYDKKIKYWDTETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +   G + L+ G+D  +   D ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
            G    +I  WDM TG++ + Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           +F     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + ++T     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIKYW 581
           + TC W G IK W
Sbjct: 525 LGTCSWGGDIKIW 534

[Close]

BLAST of Lag0040000 vs. ExPASy TrEMBL
Match: A0A5D3CVQ9 (Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00990 PE=4 SV=1)

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 571/580 (98.45%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            ++NPAEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. ExPASy TrEMBL
Match: A0A6J1HSN8 (pre-mRNA-processing factor 17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466417 PE=4 SV=1)

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 572/580 (98.62%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+EDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           MDLNPAEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. ExPASy TrEMBL
Match: A0A6J1HTD1 (pre-mRNA-processing factor 17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466417 PE=4 SV=1)

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 572/580 (98.62%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+EDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           MDLNPAEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. ExPASy TrEMBL
Match: E5GBJ7 (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 571/580 (98.45%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            ++NPAEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. ExPASy TrEMBL
Match: A0A1S3BE12 (pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 571/580 (98.45%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQN +DGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            ++NPAEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Lag0040000 vs. TAIR 10
Match: AT1G10580.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 993.8 bits (2568), Expect = 6.0e-290
Identity = 476/582 (81.79%), Postives = 523/582 (89.86%), Query Frame = 0


Query: 1   MDLLQSYTDQNGEDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDL+QSY +++      + + SSPE+SPPR+L +K+SAP+VDDT LALTVAN NQ+ SKP
Sbjct: 1   MDLIQSYEEED------EAVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP++GP+HPYAKDGIAQGMRNHKLG VEDASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHK GYAADPS   G NY+GD+EA +KND +SV+NIPQ EQK+RKIE+ KE  E E+ +
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIERSKEEREGEEKK 180

Query: 181 MDLNPAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGE--EKGGE 240
            ++ P E +NP T+ WL KNRKSPWS KKE +Q ELTEEQKKYAE++AKKK E  ++G  
Sbjct: 181 EEIEP-EAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQGET 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGE  ADKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360
           FPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F NDGSKFLTAGYDK I
Sbjct: 301 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD+NTG++TQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPN NWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 480

Query: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           WK+CKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYW 572

[Close]

BLAST of Lag0040000 vs. TAIR 10
Match: AT5G54520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 206.8 bits (525), Expect = 4.7e-53
Identity = 102/308 (33.12%), Postives = 167/308 (54.22%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 337
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 338 VRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 397
           V+D+ +   G   L+ GYD   + +D E G    +F   ++  VVK +PD+   N+ L+G
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDN--CNVFLSG 267

Query: 398 MSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEF 457
            S   +  WD+   +   EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 458 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 517
              V +        ++ P I  HP      AQS  N   I+ST   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 518 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVA 577
           AG+  + NFSPDG  + SG  +G  + +D+K+  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

[Close]

BLAST of Lag0040000 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 3.7e-29
Identity = 73/307 (23.78%), Postives = 143/307 (46.58%), Query Frame = 0


Query: 285 TWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFN----SGKCMRTYMGHSQAVRDI 344
           T + H + VS+++ F   G L+ SA  D  ++ + +        + ++ + GH   + D+
Sbjct: 19  TLTSHNRAVSSVK-FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 78

Query: 345 SFCNDGSKFLTAGYDKKIKYWDTETGQVIST-FSTGKIPYVVKLNPDDDKQNILLAGMSD 404
           +F +D    ++A  DK +K WD ETG +I T        + V  NP   + N++++G  D
Sbjct: 79  AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP---QSNMIVSGSFD 138

Query: 405 KKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 464
           + +  WD+ TG+  +    H   V  + F  +    V+SS D   R+W+ G    +K + 
Sbjct: 139 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 198

Query: 465 EPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 524
           +     +  +   PN  ++   +LDN + +++      L   K + GH+ A Y     FS
Sbjct: 199 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL---KTYTGHVNAQYCISSAFS 258

Query: 525 -PDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 584
             +G+ ++SG  +     W+  + K+ + L+ H    +    HP E + +A+   D  ++
Sbjct: 259 VTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE-NLIASGSLDKTVR 317

Query: 585 YWREPND 586
            W +  +
Sbjct: 319 IWTQKKE 317

[Close]

BLAST of Lag0040000 vs. TAIR 10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 7.6e-27
Identity = 83/311 (26.69%), Postives = 145/311 (46.62%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAV 337
           +P +  H   GH   V A R F   G+  L+ G D  +++W+  + G  ++TY  H + V
Sbjct: 6   LPTKEAHILKGHEGAVLAAR-FNGDGNYALTCGKDRTIRLWNP-HRGILIKTYKSHGREV 65

Query: 338 RDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTF--STGKIPYVVKLNPDDDKQNILLA 397
           RD+   +D +KF + G D+++ YWD  TG+VI  F    G++   VK N   D  +++++
Sbjct: 66  RDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEV-NAVKFN---DSSSVVVS 125

Query: 398 GMSDKKIVQWDMNTGQI--TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 457
              D+ +  WD  +  +   Q  D  L  V ++  V      +  S D ++R ++  I  
Sbjct: 126 AGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSV--VLTKTEIIGGSVDGTVRTFDMRIG- 185

Query: 458 VIKYISEPHMHSMPSISVHPNTNWLAAQSLDN--QILIYSTRERFQLNKKKRFAGHIVAG 517
             + +S+     +  IS+  + N + A  LD+  ++L  +T E  Q+ K     GHI   
Sbjct: 186 --REMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYK-----GHISKS 245

Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
           +      +     V+ G  +G  +FWD    KV    + H+ V     +HP E   + T 
Sbjct: 246 FKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDC-MLTS 299

Query: 578 GWDGLIKYWRE 583
             DG I+ W++
Sbjct: 306 SVDGTIRVWKK 299

[Close]

BLAST of Lag0040000 vs. TAIR 10
Match: AT4G15900.1 (pleiotropic regulatory locus 1 )

HSP 1 Score: 117.1 bits (292), Expect = 4.9e-26
Identity = 85/313 (27.16%), Postives = 142/313 (45.37%), Query Frame = 0


Query: 288 GHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGS 347
           GH   V ++ F P +     +   D  +KIWDV  +G    T  GH + VR ++  N  +
Sbjct: 174 GHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDV-ATGVLKLTLTGHIEQVRGLAVSNRHT 233

Query: 348 KFLTAGYDKKIKYWDTETGQVISTFSTGKIP--YVVKLNPDDDKQNILLAGMSDKKIVQW 407
              +AG DK++K WD E  +VI ++  G +   Y + L+P  D   +LL G  D     W
Sbjct: 234 YMFSAGDDKQVKCWDLEQNKVIRSYH-GHLSGVYCLALHPTLD---VLLTGGRDSVCRVW 293

Query: 408 DMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 467
           D+ T         H   V ++     + + VT S D +++ W+      +  ++  H  S
Sbjct: 294 DIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTH-HKKS 353

Query: 468 MPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN---FSPDG 527
           + ++++HP  N  A+ S DN        ++F L  K  F  ++++     +N    + DG
Sbjct: 354 VRAMTLHPKENAFASASADN-------TKKFSL-PKGEFCHNMLSQQKTIINAMAVNEDG 413

Query: 528 RFVMSGDGEGKCWFWDWKTCKVFR---------TLKCHEGVCIGCEWHPLEQSKVATCGW 587
             V  GD  G  WFWDWK+   F+         +L+   G+   C  +    S++ TC  
Sbjct: 414 VMVTGGD-NGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAAC--YDNTGSRLVTCEA 468

The following BLAST results are available for this feature:

BLAST of Lag0040000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893410.1	0.0e+00	99.14	pre-mRNA-processing factor 17 isoform X1 [Benincasa hispida]	[more]
XP_038893411.1	0.0e+00	99.14	pre-mRNA-processing factor 17 isoform X2 [Benincasa hispida]	[more]
XP_022966828.1	0.0e+00	98.62	pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima]	[more]
XP_008446212.1	0.0e+00	98.45	PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo] >KAA0034318.1...	[more]
XP_008446211.1	0.0e+00	98.45	PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo] >ADN33838.1 p...	[more]

BLAST of Lag0040000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O60508	6.7e-153	48.95	Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1	[more]
Q9DC48	1.3e-151	48.13	Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1	[more]
O43071	6.0e-101	36.76	Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P40968	3.8e-71	31.44	Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]
E9Q349	2.3e-44	30.35	WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1	[more]

BLAST of Lag0040000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVQ9	0.0e+00	98.45	Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1HSN8	0.0e+00	98.62	pre-mRNA-processing factor 17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HTD1	0.0e+00	98.62	pre-mRNA-processing factor 17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
E5GBJ7	0.0e+00	98.45	Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BE12	0.0e+00	98.45	pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012...	[more]

BLAST of Lag0040000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10580.1	6.0e-290	81.79	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G54520.1	4.7e-53	33.12	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	3.7e-29	23.78	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64730.1	7.6e-27	26.69	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G15900.1	4.9e-26	27.16	pleiotropic regulatory locus 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 209..229
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 330..367 score: 11.5765
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 416..448 score: 10.495596
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 286..320 score: 10.706503
None	No IPR available	CDD	cd00200	WD40	coord: 282..581 e-value: 1.26275E-69 score: 225.292
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 306..320 score: 33.9 coord: 349..363 score: 29.88 coord: 435..449 score: 29.36
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 409..448 e-value: 2.6E-6 score: 37.0 coord: 541..581 e-value: 3.5E-5 score: 33.2 coord: 323..362 e-value: 4.4E-10 score: 49.5 coord: 497..538 e-value: 0.14 score: 21.2 coord: 365..406 e-value: 3.6 score: 13.5 coord: 452..491 e-value: 10.0 score: 10.6 coord: 279..319 e-value: 6.9E-9 score: 45.5
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 324..362 e-value: 5.1E-6 score: 27.1 coord: 410..447 e-value: 0.0014 score: 19.4 coord: 503..538 e-value: 0.031 score: 15.2 coord: 281..319 e-value: 4.9E-6 score: 27.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 416..448 score: 12.613797
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 286..320 score: 12.881143
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 330..371 score: 15.420926
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 266..581 e-value: 3.2E-96 score: 324.2
IPR032847	Pre-mRNA-processing factor 17	PANTHER	PTHR43979	PRE-MRNA-PROCESSING FACTOR 17	coord: 48..581
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 306..320
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 277..580

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0040000.1	Lag0040000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding