Lag0039958 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039958
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein DETOXIFICATION
Location	chr13: 1141168 .. 1141527 (-)
RNA-Seq Expression	Lag0039958
Synteny	Lag0039958

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATCTTTCTCAGCCACTTCTCTCACCGAGAGAGGAGAATGAACGGATCAAATCGCCGGAGTCCGGCCGAAAAGAAACGAAGGCTGTTTTTGCTCCCGACGCCGATGACATCCCTCCGATCAACGGCGCCCGTGATTTCTACAGAGAATTCCGTGTTGAATTAAAGAAGCTGTGGTACCTTGCAGCTCCGGCGGTGTTCACGTCCGTTTGCCAGTACTCTTTCGGCGCCATCACTCAACTCTTCGCCGGCCAAGTCAGCACGATTGCCCTCGCCGCCGTCTCCATCGAGAACTCCGTCATCGCCGGCTTTTCGTTCGGCGTCATGGCACGTACCTTACCCTATCTGCAAACCTAA

mRNA sequence

ATGGCGGATCTTTCTCAGCCACTTCTCTCACCGAGAGAGGAGAATGAACGGATCAAATCGCCGGAGTCCGGCCGAAAAGAAACGAAGGCTGTTTTTGCTCCCGACGCCGATGACATCCCTCCGATCAACGGCGCCCGTGATTTCTACAGAGAATTCCGTGTTGAATTAAAGAAGCTGTGGTACCTTGCAGCTCCGGCGGTGTTCACGTCCGTTTGCCAGTACTCTTTCGGCGCCATCACTCAACTCTTCGCCGGCCAAGTCAGCACGATTGCCCTCGCCGCCGTCTCCATCGAGAACTCCGTCATCGCCGGCTTTTCGTTCGGCGTCATGGCACGTACCTTACCCTATCTGCAAACCTAA

Coding sequence (CDS)

ATGGCGGATCTTTCTCAGCCACTTCTCTCACCGAGAGAGGAGAATGAACGGATCAAATCGCCGGAGTCCGGCCGAAAAGAAACGAAGGCTGTTTTTGCTCCCGACGCCGATGACATCCCTCCGATCAACGGCGCCCGTGATTTCTACAGAGAATTCCGTGTTGAATTAAAGAAGCTGTGGTACCTTGCAGCTCCGGCGGTGTTCACGTCCGTTTGCCAGTACTCTTTCGGCGCCATCACTCAACTCTTCGCCGGCCAAGTCAGCACGATTGCCCTCGCCGCCGTCTCCATCGAGAACTCCGTCATCGCCGGCTTTTCGTTCGGCGTCATGGCACGTACCTTACCCTATCTGCAAACCTAA

Protein sequence

MADLSQPLLSPREENERIKSPESGRKETKAVFAPDADDIPPINGARDFYREFRVELKKLWYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVMARTLPYLQT

Homology

[Close]

BLAST of Lag0039958 vs. NCBI nr
Match: XP_038893145.1 (protein DETOXIFICATION 29 [Benincasa hispida])

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MADLSQPLLSPREENERIKSPESGRKETKAVFAPDADDIPPINGARDFYREFRVELKKLW 60
           MAD SQPLLS REEN++I  PESGRK TK VFAPDADDIPPIN ARDFYREF VELKKLW
Sbjct: 1   MADFSQPLLSQREENKQIHQPESGRKGTKVVFAPDADDIPPINTARDFYREFCVELKKLW 60

Query: 61  YLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVM 111
           YLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVM
Sbjct: 61  YLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVM 110

[Close]

BLAST of Lag0039958 vs. NCBI nr
Match: TYK15640.1 (protein DETOXIFICATION 29 [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 7.5e-45
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MADLSQPLLSPREENERI-KSPESGRKETKAVFAPDADDIPPINGARDFYREFRVELKKL 60
           MADLSQPLLS REEN+ I  SPESGRK+TKA+FAPDADDIPPIN  RDFYREF +ELKKL
Sbjct: 1   MADLSQPLLSQREENKPIDHSPESGRKDTKALFAPDADDIPPINTTRDFYREFCIELKKL 60

Query: 61  WYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVMARTL 115
           WYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVS+ENSVIAGFSFG+MA  L
Sbjct: 61  WYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSVENSVIAGFSFGIMALQL 115

[Close]

BLAST of Lag0039958 vs. NCBI nr
Match: KAA0034279.1 (protein DETOXIFICATION 29 [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 7.5e-45
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MADLSQPLLSPREENERI-KSPESGRKETKAVFAPDADDIPPINGARDFYREFRVELKKL 60
           MADLSQPLLS REEN+ I  SPESGRK+TKA+FAPDADDIPPIN  RDFYREF +ELKKL
Sbjct: 1   MADLSQPLLSQREENKPIDHSPESGRKDTKALFAPDADDIPPINTTRDFYREFCIELKKL 60

Query: 61  WYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVMARTL 115
           WYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVS+ENSVIAGFSFG+MA  L
Sbjct: 61  WYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSVENSVIAGFSFGIMALQL 115

[Close]

BLAST of Lag0039958 vs. NCBI nr
Match: XP_004135268.1 (protein DETOXIFICATION 29 [Cucumis sativus] >KGN51764.1 hypothetical protein Csa_008817 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 1.7e-44
Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MADLSQPLLSPREENERIKSPESGRKETKAVFAPDADDIPPINGARDFYREFRVELKKLW 60
           MA+LSQPLLS  EEN+ I SPESGRK+TK +FAPDADDIPPIN ARDFYREF +ELKKLW
Sbjct: 1   MAELSQPLLSQSEENKLIDSPESGRKDTKVLFAPDADDIPPINTARDFYREFCIELKKLW 60

Query: 61  YLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVM 111
           YLAAPAVFTS+CQYSFGAITQLFAGQVSTIALAAVS+ENSVIAGFSFG+M
Sbjct: 61  YLAAPAVFTSICQYSFGAITQLFAGQVSTIALAAVSVENSVIAGFSFGIM 110

[Close]

BLAST of Lag0039958 vs. NCBI nr
Match: KAG6601533.1 (Protein DETOXIFICATION 31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.5 bits (480), Expect = 1.7e-44
Identity = 97/111 (87.39%), Postives = 101/111 (90.99%), Query Frame = 0


Query: 1   MADLSQPLLSPREENERIKSPESGRKETKAVFAPDADDIPPINGARDFYREFRVELKKLW 60
           MADLSQPLLSP E+ + I SPESGRKETKA+F PD  DIPPINGARDFYREF VE KKLW
Sbjct: 1   MADLSQPLLSPTEKTKWIHSPESGRKETKAIFVPDGGDIPPINGARDFYREFYVEFKKLW 60

Query: 61  YLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVMA 112
           YLAAPAVFT +CQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVMA
Sbjct: 61  YLAAPAVFTFICQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVMA 111

[Close]

BLAST of Lag0039958 vs. ExPASy Swiss-Prot
Match: Q9LPV4 (Protein DETOXIFICATION 31 OS=Arabidopsis thaliana OX=3702 GN=DTX31 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-25
Identity = 63/117 (53.85%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 3   DLSQPLLSPREENERIKSPESGRKETKAV---------FAPDADDIPPINGARDFYREFR 62
           D   P L+  EE E   + +    E   V         F+  A DIPPI+G  DF REFR
Sbjct: 6   DFKDPFLASTEEEELDPATQKALMEYLGVGSRASSLVSFSSTAVDIPPISGVGDFVREFR 65

Query: 63  VELKKLWYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVM 111
           +E +KLW LA PA+FT++ QYS GA+TQ+FAG +ST+ALAAVSIENSVIAGFSFG+M
Sbjct: 66  IESRKLWKLAGPAIFTTMSQYSLGAVTQVFAGHISTLALAAVSIENSVIAGFSFGIM 122

[Close]

BLAST of Lag0039958 vs. ExPASy Swiss-Prot
Match: Q38956 (Protein DETOXIFICATION 29 OS=Arabidopsis thaliana OX=3702 GN=DTX29 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 0


Query: 37  DDIPPINGARDFYREFRVELKKLWYLAAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVS 96
           DDIPPI     F REF VE KKLWYLA PA+FTSV QYS GAITQ+FAG +STIALAAVS
Sbjct: 27  DDIPPITTVGGFVREFNVETKKLWYLAGPAIFTSVNQYSLGAITQVFAGHISTIALAAVS 86

Query: 97  IENSVIAGFSFGVM 111
           +ENSV+AGFSFG+M
Sbjct: 87  VENSVVAGFSFGIM 100

[Close]

BLAST of Lag0039958 vs. ExPASy Swiss-Prot
Match: Q9LS19 (Protein DETOXIFICATION 30 OS=Arabidopsis thaliana OX=3702 GN=DTX30 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.9e-24
Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 23  SGRKETKAVFAPDADDIPPINGARDFYREFRVELKKLWYLAAPAVFTSVCQYSFGAITQL 82
           S  +E  A+     +DIPPI     F +EF VE+KKLWYLA PA+F S+ QYS GA TQ+
Sbjct: 13  SAAEEPPALPFSSVEDIPPITTVGGFVKEFNVEVKKLWYLAGPAIFMSITQYSLGAATQV 72

Query: 83  FAGQVSTIALAAVSIENSVIAGFSFGVM 111
           FAG +STIALAAVS+ENSVIAGFSFGVM
Sbjct: 73  FAGHISTIALAAVSVENSVIAGFSFGVM 100

[Close]

BLAST of Lag0039958 vs. ExPASy Swiss-Prot
Match: F4I4Q3 (Protein DETOXIFICATION 32 OS=Arabidopsis thaliana OX=3702 GN=DTX32 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.7e-23
Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 13  EENERIKSPESGRKETKAVFAPDADDIPPINGARDFYREFRVELKKLWYLAAPAVFTSVC 72
           +  + I S +  R  TK+       D+PPI+G RDF R+F  E KKLW+LA PA+FTS C
Sbjct: 7   DHEDTISSEQEHRAHTKS-----DTDMPPISGGRDFIRQFAAESKKLWWLAGPAIFTSFC 66

Query: 73  QYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVM 111
           QYS GA+TQ+ AG V+T+ALAAVSI+NSVI+GFS G+M
Sbjct: 67  QYSLGAVTQILAGHVNTLALAAVSIQNSVISGFSVGIM 99

[Close]

BLAST of Lag0039958 vs. ExPASy Swiss-Prot
Match: Q9SX83 (Protein DETOXIFICATION 33 OS=Arabidopsis thaliana OX=3702 GN=DTX33 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-14
Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 3   DLSQPLLSPREENERIKSPESGRKETKAVFAPDADDIPPINGARDFYREFRVELKKLWYL 62
           D + PLL PRE  E      +G K    V+A                +EF  E K+LW L
Sbjct: 4   DKTLPLLDPREPPEL-----TGTKSASKVWA----------------KEFGEESKRLWEL 63

Query: 63  AAPAVFTSVCQYSFGAITQLFAGQVSTIALAAVSIENSVIAGFSFGVM 111
           A PA+FT++ QYS GA+TQ F+G++  + LAAVS+ENSVI+G +FGVM
Sbjct: 64  AGPAIFTAISQYSLGALTQTFSGRLGELELAAVSVENSVISGLAFGVM 90

The following BLAST results are available for this feature:

BLAST of Lag0039958 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893145.1	2.0e-45	90.91	protein DETOXIFICATION 29 [Benincasa hispida]	[more]
TYK15640.1	7.5e-45	86.96	protein DETOXIFICATION 29 [Cucumis melo var. makuwa]	[more]
KAA0034279.1	7.5e-45	86.96	protein DETOXIFICATION 29 [Cucumis melo var. makuwa]	[more]
XP_004135268.1	1.7e-44	86.36	protein DETOXIFICATION 29 [Cucumis sativus] >KGN51764.1 hypothetical protein Csa...	[more]
KAG6601533.1	1.7e-44	87.39	Protein DETOXIFICATION 31, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lag0039958 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPV4	2.3e-25	53.85	Protein DETOXIFICATION 31 OS=Arabidopsis thaliana OX=3702 GN=DTX31 PE=2 SV=1	[more]
Q38956	1.2e-24	75.68	Protein DETOXIFICATION 29 OS=Arabidopsis thaliana OX=3702 GN=DTX29 PE=1 SV=1	[more]
Q9LS19	9.9e-24	63.64	Protein DETOXIFICATION 30 OS=Arabidopsis thaliana OX=3702 GN=DTX30 PE=2 SV=1	[more]
F4I4Q3	3.7e-23	56.12	Protein DETOXIFICATION 32 OS=Arabidopsis thaliana OX=3702 GN=DTX32 PE=3 SV=1	[more]
Q9SX83	1.9e-14	44.44	Protein DETOXIFICATION 33 OS=Arabidopsis thaliana OX=3702 GN=DTX33 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR11206	MULTIDRUG RESISTANCE PROTEIN	coord: 24..111
None	No IPR available	PANTHER	PTHR11206:SF275	PROTEIN DETOXIFICATION 31	coord: 24..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039958.1	Lag0039958.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0042910	xenobiotic transmembrane transporter activity