Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGACAAGCTTATGAAGGAAGAAAGGAGCATAGCAACTCTTATCCTATGGAATTTGTGGACTTACAGAAACATAGTCCTTTTCAATGGCTCTAAAGCAGACAAAGGGATGATCATCAACATAATTGAAAAAAGCATCGAAGAGCACTTGAAGGTTAGAAATGATAACCTGAATATTCCCAGACCGGAGAGCCATCGGAGTCAAGCTTTTTGGTCCCCCCATTCCCCCGTTCCTAAAGCTAAACGCAGACGCATCTTGGAGCAACTCAAAGCAGACCAGAGGTATGGGTTAGACAGTGTGTGACTCCGTGGGGTCTTTGATTATAGCTGGTAACAAGAAAGTCAAAAGGAAGTGGTCAATTTTAGCTCTCGAAGCTTTGACAGTGAAGGAAGGTTTAAAATCGTACCTCAATCATACTTCGTGCAAAGCCCTCCCTGTGGTGGTGGAATCGGATTCCATAACACTGATTAAGCTTCTAAACAAGCAATATTTTGTCCTCTCAGAGGCCAAGAACGTAGTTGACGATATAGAAGACCTAGCAAGAGAGACGACAACTTTTGATTTTCGTTGGTGCCCAAGATCGAGCAATTGGGCAGCTCACTCCCTGGCGATTAATGCAAGAAATTCGCCTTCAACGGATTCTCAATCGAGATAATTTTTTGCTAATTGCAGTAGGCCGTTAGTTTTTTGTGTTTCTGACCCTTCCCACCTGAGGGAAGATAATATATTTTTTGGGAAAGATTATTTGCCTAGCTGGCTATCCTCACGTATTAACGATGATTGTATGAATTTGGTTGGTGGTTAGTTGAATGAAGTTATTTCCATTTTTTTTTAAAGCTTGCACCTAGATGTCCATCAATGGACACGACACATATCTTCACAATGGTATGATATTATCAACTTTGGGCATAAGCCCTCATGGATTTGTTTTTGGTTCACCCCAAAATGCCTCATACCAATTGAGATACTCGTTATCCCTTATAAGCCTATGATCATCCTCTTGTCTAGCCAATGTGAGACTTTGGCTGCACTCTATAATTCACAACAATCCTCCCCTCGAACAAAGTACCACGAACGAGCCTCCCTTCAAATAGTCATCTATCCGTCAAACACTCCTTCACCAAGAAGTTTGCTCTTATCTAGGCCAAACGCCTACCCAATAGTGCCTAAATATGGATCTCCACCAAGACTATGTTTTTCAAGGCTCCCAAATTCTTTGTTTGACACTCGAGGAATTTACAAAACGGCTACATTAGGGGCATGACTCTGATACCACTTGTAAGGGACTACCGGATAACCCAATATCTCAACAAATGGTATGATATTGTCCACTTTGGGCATAAGCCCTCATGACTTTGTATTTGGTTCACCCCAAAAGGCCTCATACCAATGGAGATACTTGTCATCCCTTATAAACCTATGCAATCCCCATCTTGTCTAGCCAGTGTGGGACTTTGGTTACACTGTATAATTCACAATAGGAACCTATACATTCAATCATGTGTCTAATGAATATGTAAATTTGAATGAATCTCAAATATACCAAACACTAAATTTATAATAATCAACGTACAAGTTACAAAGTTAAAGTGAGTATAACTCAACGATCATTGACATTTATGTCAAACTAAAAAGGTAGTTAAAGTGATTATAACTCAGCGGTCATTGACATTTATGCCAAACTAAAAATGTAGTTAAAGTGAGTATAACTCAGCGGTTATTCACATTCATGTCAAACTAAAAAGTTTGAAGTTGGAATCTCTCATCTTAATTGCTGTTGAACCGAAAGAAAGGAAAAAAAAAAAGAAAGAAAAAAAGAAAAAAAGAAAAAGAAAAAGAAAAACCTACAAGTTACAAGCCGAGCAACCCAACTTATTGAATATGGGCCAGATCCGGAAAATTTGGACGCCCATGGATCCATGTTGAACTTCGAGCAGGACTCGGTGGGGCGGGAGCGAGGGACATTTTACAGCGGCTGAACCTCCTACGACTGCCCGTGGCCATTTGACGACTGACGAGGGACTGACATCGCCAAGGGGTTTAACAAGTTCGAAACTCTGCACTTCATTGTTCCGATTTCGAGTTCTACGTTCTTCCCCGCCATTTCTTTCTCTTTGGTGCACGATGGAGGCTGTGAGGCTGCGAGTTTTGTTCAAAGACAAGGACGTACTGACCGAGTCGCTCTCGGGATTGAGCCGGAGCTGGATTGTCCTTAAACCTCATCTCCGAACTATCTCCGACCTCTCCTCCTACATCCTTTCCGTTTTCCGTCTTCACGATGCCTGCCCCAACGGTCTAATCCTCTCTGTAAGATCTCTCTCTCTGATCAGGTTACCTTACTGAATGATTGTCTGCGGATGAAGGTCGTAGGAGGAAGTATTTGCGATTATATGTGCTAGTAGCAGTGTAGCACTGGCCTAATTGTACTATCTTTAGAAGTTCACTGCTGACAGTTTCAATTGCTTGTAGAAACGAACACGTTTCTCCCCTTTATTCGCTTGCTTTACTTTTCATTGTCTTCACTCTTCATAATGGCGGCACATTGCCCTAACTTTGTTTTTCTGGTAGATGGATGGCTTTGTGTTACCTCCATTTGAGTCGGTTTGTATCTTGAAGGATAAGGACATTGTCAGGTTGGTTTGTGTGTGACATTTGTTTGTGTATATTCCATTGTTTTTATTTGCTCTTTTGCTGGAAATTAGAGCTTTATTTGTTGACCAGAGTGAAGAAGAAAAAATGTAAGGCAATCAGTCTTGAGGTCGGCAACAGATTGATCGAAGCTGAGGAATTCAGGGAGAGGAAACCAGTTGACAAAGGAGTGAAGCTTCTGGCTTACAAGGAGTTTGAAAATGAATCTAATGGCTATGGGAGTGAATCAGAGGAAGATGAACCTAAGGCTACTTCGCCGATGAAAGCTGCTCCAGTAGAAAAGAAAGTGTCCAAGAAAAGAAAAGCTTCAAAGATAATTCGCAACTCAAAGTATGTATAGTGCCCGTATTAACTCTGATATTCTGATGCCGGTTGGAGGGCGGAGGCTTATGTATTGTGTATTTTTTTTTACCAACACTAAGAGAAAAATGATCATCTTCTGGCATTGAAGATGGGTACTTGGTCAGCTCCTCCTACTAAAAATGGCTGCGGAGATATCATGCTTTCTAGCAATACTTCCATGTTTTTTATACTTCTCATAATCTTCTTTAACATAACCGACGCAGTACATTTTTTTGTCCAACTCCTTTTCTTTCTCCGTTCTTATAAATGATAATTATTGCAACTGATATATTTACTCTGGTTAATTCCATTTTCTCCTTTATGCTTATAATTTTTTGCAATCAGTCTATTTATTCTGGTCTTATTTCAAAATTAAAAAATTACAGGAGGAAGAAAAATAAATCTTGCCCTTCTGAAGAATTTCCAACTATCATAGCAGATGTTCAGCACACTACTGAAGAGCATGAAGAAAGAAATCATCCGAAGTCTGGCCTACCACAAAAGGTCCTAGTCAGTGCAAATGATTCATCCAGCAGTTCTAGTGAATGTGAATCGGATACATCCAACAGCATTGAAATTGATGGAAGAAGCAACAACATCATTAAGACAACTGCCAATGCAGAGAGGTGGTTCCTGCAGCTTTATTATAACAATGGCAATGAACTTCCAAGCCTCATGAAATTTGTTTATCTGATTTATTGGGTAGTGAATCTGCAAAATTGAAATATTTAGCATCTTCTACTGCTGCATCCTAATTCCCATTTTAGATTTACCTATGCTTATCTCTTAGCATCTCATTCGTATTTTGATCTGGGAATGGCCTGTTAATAGGGCCTGGATTTTGTACTTTATTATCATTGTTGACAATTTGTCAAACTTTGCTATGTTCCTTGACCACGGGTCTTTATGAATGTGATAATTATTGTTAGTGAAATCACCATGTAGGCTCTATTTTTGTTTTTATATACTATTGCAACATGGTTATAGTTGGAGAATGATAAGATATGTTGATTGTCTCGTTGCAACATTGTAAAAACCTTGAACACCCCCCTCCCTCTATTGTTGCACTGATTTATTTTTCATCTGCCTGCTTGGTTAGAAAAATGTCTTACAATTCATAGTTGTTTAGGGTTGATCAGCTTGGAGTTGGCGGGAGACATATTGAGTTGTCTGACACAGCTGGTGGAAGTAAAAAGGTTTCTATTTATTATGACTATCATCATTATATGGCTATAAAAAATTGTTGATTACTTGTTAGCAGTTTTTACTATTTTTAATTTTGATATCGATCGGACTTATAAAATATAATTTTTTTCCGTATGCAATGACTGGCTGTAACTCGCATTAGTTATACTCCAGTATTACATCTGCAAGTATGATAAATTTACTGCTAATAGATATATCAGATCTGGTTCAATTTGATTTGACGAGAATTTATAATTTTGTTTGTTTGGATGGCTTTTTGTTTTAAAAAAATTATTTTGTTTATTTATTTTTCAATATCAAGGTATGGCGCTAGGATGAGTGAAGAGAATGAAAGAGAGTTTCAACTTTGTTATTCCCTCTTGTTTGAATTTGGCAACAGAGAGAAAGATGAAATACTTTGTAACTGGATCCAAGGATTTTAAACCCTTCTTTCAGAAAATTAGTATTAAAGATTCAATTGTTTAATCATTTATTCTATTTTGGTTGTTGAATTGTCATTCATTAAATCTCTCTCTTCTTTGTGTTCTTTTCTTTTCTCGTTAGGGTCCTAGTAGAAGTAGTCGCCGTAAGAAGGCAAAAAGACGTTGGTTGAGGGAAAAAGCTCAAAATGAAGAGGTATATTGGTGCCACAAATGGCAGTTTTTCATTGCAAATATCTGTATTAATTCCTTTTACACTGAAAAATTATACCATGTATCAATTCTTTATTTTTATCATTTTGAATGTGTGAAGCTCAAGTTCTACTTGGTTTGATCATACATATATTTCATGTGTATGTCCTTCTGAACTGACAATTATGCTCATATAGAATTAGAATTAGCGTTGGCAAATATGCTCATAATTGTTTTGAGATGTGGTCGCCTGGTTCCTATATTTTTGCAGCCACAGCAGCAGTTATTTGAAACAAGTATTGATCAAGCTCCTAGTCAAAATGGTGATGTTGATATGGACGACGACGATGACACTGTTCCTGTGGTAGTCAAGCCAGGACACATTCGCTTTGAGCCAGTTGGAAAAGGTTTGATGATTTATTTCTATTTGAGACTCAGTATGCATGTGAATCGGTGGGAACAGTATTATATGAGGCTCAAAAGAGGGTGGGGAAGTATCTTGCGGAAGCTTGCTTGTTATATTTGTTTGATTTCATATTTTTACAACATGGAGCACACAATTATGAGTTCCCTGATTGCTCTTATATCATTACAGTTGCTGCGGATCAGTCTGGGCAACAAAAGCAAAACCATTTCCCTAAGGTATCCATGCTGTTCCGATATCTTATGCTGCCTCTTGAAGTTTGCAATAGCTAATTATTATTGTTTTGTTATGCTTTAGGAAACATTGCATTGGAATGGCATAACCAACAAGAAGAAAGGTCAAAAATGGGGCAAAGAGAAAACTCCATCTTGGAAGAGGAACAATTCTAACAATTGTACAAGCGAAACTCTTCAGTTGCCTACTTCTGAAACTGAGCAACCTACAACGCCAGCACCTGTAATTGGTCCCATAAATTTTGATGAACTTAGACCATGCACTGGCTTGCCTCAGGTTTGGTTTGCACAGTTAGCTTCATCTGCTTGCTTAATTATGTGTTTAGTTGGGCATGAATGGCTTGCGAAATGGAATGATCAAGTCATGTTAACAGTTCTCATTAAATTAAATGTTTATCATTTCCCAAGTCTTAACTTTTTCTTTAGGGCCAATTTCATAAGTCATAAAATTTATATATAATTTTATGTAGGCAGTTACTTTTCATACTTACAGAAATAGGAAAAGTTACTTGATAATTATCAAAGTTTTTATTTAAATGCATGTCAAACGTGTTAAATTAGTAGCATATTGGGCCAATTAAAATTTGATTATATATGTTATGTTTAATGCAAAAAATTTATATAATTTGTGTTTTATTTATTGCAGGAAGGTGATTTAGTTGCGTGTTAAATTAGTAGCATATTGGGCCAATTAAAATTTGATTATATATGTTATGTTTAATGCAAAAAATTTATATAATTTGTGTTTTATGTTATTTTTATTTAAATGCATGTCAAACGTGTTAAATTAGTAGCATATTGGGCCAATTAAAATTTGATTATATATGTTATGTTTAATGCAAAAAAATTATATAATTTGTGTTTTATTTATTGCAGGAAGGTGATTTAGTTGCGTATCGTTTGATTGAGTTATCCTCAACCTGGACACCTGAGATTTCCTCCTTCCGAGTAAAATTCTTCTTCTCTGTAATTTTCTGCCTGATTCCTTGTTTTAACCACCTATATTTTATTCTAGTTCCTTTTCCTATTTCAGGCTGGAAAAGTATCATGGTATGACATTGAATCCAATCGAATTATGCTAATACCAGTTCCAGAATACCCATTACCTGTCAAAAAAGAGATAGACGAGGATTCTGGACTACAATTAGATACAACCCCATATGGGGAAGATGGCTCTTTAAAGGTACTTGTGCCAAGCATAATCTTTGGTTTGCAATTATCCAAATTATTTTCCCCCTCAATTTGTCACATAGTCAAAGTATTTTATATATATGTATAAAATAAACAGTCGGTCTGTAGTTTATGTTCACCTGTGTTCTTTGTAAGCAATGGTATAGTTATTTATAGGAACTACTAATTCTAGTATGTACATGCTAAACATGCTGCTTATCCTTGTTTGCAATGAACTGACAAATGGAGATCTTCAACAGATAGATTTTGCCTCTCTTGTTGATCTTCGGCTTATCAAGCAAGGAAACTTGGATTCTTCAAAAACTGCAGTTAACCAGGAAATCACTTCCGCTAAACAAAGTGCAGAAAGTTCCAGGCTCGCCCATGACAAGGGAGATGCCAACGACACTAAACAAGGTATCCTTCATAGTTTGTAGCCATTCTAGGAATAGTTTAGTAGGGAGCTGGTTACGTTTAATGGGCTATTTTATGATTGGTCTTCAGGTAATGGAAAAGTAAGTGCGTGGGATGAAATCAGCAAGGCTCTTAGTGCAAAGAAAGCGGAACTTTCTAAGAATGATGGTTGGAATCGAGAAGAAACTTCAGTAAGGAGGTCAGATGATTGGAATCAAGAAGAAAGTTCAGGAAGGAGGTCATGGTCCTATAGGTCACTCAGAGGCAGCGCCCTCGGTCCAACAATGGCTCTATTAAGAGCTCAGAATGAACTCTAA
mRNA sequence
ATGATGGACAAGCTTATGAAGGAAGAAAGGAGCATAGCAACTCTTATCCTATGGAATTTGTGGACTTACAGAAACATAGTCCTTTTCAATGGCTCTAAAGCAGACAAAGGGATGATCATCAACATAATTGAAAAAAGCATCGAAGAGCACTTGAAGGTTAGAAATGATAACCTGAATATTCCCAGACCGGAGAGCCATCGGAGTCAAGCTTTTTGGTCCCCCCATTCCCCCGTTCCTAAAGCTAAACGCAGACGCATCTTGGAGCAACTCAAAGCAGACCAGAGGACTCGGTGGGGCGGGAGCGAGGGACATTTTACAGCGGCTGAACCTCCTACGACTGCCCGTGGCCATTTGACGACTGACGAGGGACTGACATCGCCAAGGGGTTTAACAAGTTCGAAACTCTGCACTTCATTGTTCCGATTTCGAGTTCTACGTTCTTCCCCGCCATTTCTTTCTCTTTGGTGCACGATGGAGGCTGTGAGGCTGCGAGTTTTGTTCAAAGACAAGGACGTACTGACCGAGTCGCTCTCGGGATTGAGCCGGAGCTGGATTGTCCTTAAACCTCATCTCCGAACTATCTCCGACCTCTCCTCCTACATCCTTTCCGTTTTCCGTCTTCACGATGCCTGCCCCAACGGTCTAATCCTCTCTATGGATGGCTTTGTGTTACCTCCATTTGAGTCGGTTTGTATCTTGAAGGATAAGGACATTGTCAGAGTGAAGAAGAAAAAATGTAAGGCAATCAGTCTTGAGGTCGGCAACAGATTGATCGAAGCTGAGGAATTCAGGGAGAGGAAACCAGTTGACAAAGGAGTGAAGCTTCTGGCTTACAAGGAGTTTGAAAATGAATCTAATGGCTATGGGAGTGAATCAGAGGAAGATGAACCTAAGGCTACTTCGCCGATGAAAGCTGCTCCAGTAGAAAAGAAAGTGTCCAAGAAAAGAAAAGCTTCAAAGATAATTCGCAACTCAAAGAGGAAGAAAAATAAATCTTGCCCTTCTGAAGAATTTCCAACTATCATAGCAGATGTTCAGCACACTACTGAAGAGCATGAAGAAAGAAATCATCCGAAGTCTGGCCTACCACAAAAGGTCCTAGTCAGTGCAAATGATTCATCCAGCAGTTCTAGTGAATGTGAATCGGATACATCCAACAGCATTGAAATTGATGGAAGAAGCAACAACATCATTAAGACAACTGCCAATGCAGAGAGGGTTGATCAGCTTGGAGTTGGCGGGAGACATATTGAGTTGTCTGACACAGCTGGTGGAAGTAAAAAGGGTCCTAGTAGAAGTAGTCGCCGTAAGAAGGCAAAAAGACGTTGGTTGAGGGAAAAAGCTCAAAATGAAGAGCCACAGCAGCAGTTATTTGAAACAAGTATTGATCAAGCTCCTAGTCAAAATGGTGATGTTGATATGGACGACGACGATGACACTGTTCCTGTGGTAGTCAAGCCAGGACACATTCGCTTTGAGCCAGTTGGAAAAGTTGCTGCGGATCAGTCTGGGCAACAAAAGCAAAACCATTTCCCTAAGGAAACATTGCATTGGAATGGCATAACCAACAAGAAGAAAGGTCAAAAATGGGGCAAAGAGAAAACTCCATCTTGGAAGAGGAACAATTCTAACAATTGTACAAGCGAAACTCTTCAGTTGCCTACTTCTGAAACTGAGCAACCTACAACGCCAGCACCTGTAATTGGTCCCATAAATTTTGATGAACTTAGACCATGCACTGGCTTGCCTCAGGAAGGTGATTTAGTTGCGTATCGTTTGATTGAGTTATCCTCAACCTGGACACCTGAGATTTCCTCCTTCCGAGCTGGAAAAGTATCATGGTATGACATTGAATCCAATCGAATTATGCTAATACCAGTTCCAGAATACCCATTACCTGTCAAAAAAGAGATAGACGAGGATTCTGGACTACAATTAGATACAACCCCATATGGGGAAGATGGCTCTTTAAAGATAGATTTTGCCTCTCTTGTTGATCTTCGGCTTATCAAGCAAGGAAACTTGGATTCTTCAAAAACTGCAGTTAACCAGGAAATCACTTCCGCTAAACAAAGTGCAGAAAGTTCCAGGCTCGCCCATGACAAGGGAGATGCCAACGACACTAAACAAGGTAATGGAAAAGTAAGTGCGTGGGATGAAATCAGCAAGGCTCTTAGTGCAAAGAAAGCGGAACTTTCTAAGAATGATGGTTGGAATCGAGAAGAAACTTCAGTAAGGAGGTCAGATGATTGGAATCAAGAAGAAAGTTCAGGAAGGAGGTCATGGTCCTATAGGTCACTCAGAGGCAGCGCCCTCGGTCCAACAATGGCTCTATTAAGAGCTCAGAATGAACTCTAA
Coding sequence (CDS)
ATGATGGACAAGCTTATGAAGGAAGAAAGGAGCATAGCAACTCTTATCCTATGGAATTTGTGGACTTACAGAAACATAGTCCTTTTCAATGGCTCTAAAGCAGACAAAGGGATGATCATCAACATAATTGAAAAAAGCATCGAAGAGCACTTGAAGGTTAGAAATGATAACCTGAATATTCCCAGACCGGAGAGCCATCGGAGTCAAGCTTTTTGGTCCCCCCATTCCCCCGTTCCTAAAGCTAAACGCAGACGCATCTTGGAGCAACTCAAAGCAGACCAGAGGACTCGGTGGGGCGGGAGCGAGGGACATTTTACAGCGGCTGAACCTCCTACGACTGCCCGTGGCCATTTGACGACTGACGAGGGACTGACATCGCCAAGGGGTTTAACAAGTTCGAAACTCTGCACTTCATTGTTCCGATTTCGAGTTCTACGTTCTTCCCCGCCATTTCTTTCTCTTTGGTGCACGATGGAGGCTGTGAGGCTGCGAGTTTTGTTCAAAGACAAGGACGTACTGACCGAGTCGCTCTCGGGATTGAGCCGGAGCTGGATTGTCCTTAAACCTCATCTCCGAACTATCTCCGACCTCTCCTCCTACATCCTTTCCGTTTTCCGTCTTCACGATGCCTGCCCCAACGGTCTAATCCTCTCTATGGATGGCTTTGTGTTACCTCCATTTGAGTCGGTTTGTATCTTGAAGGATAAGGACATTGTCAGAGTGAAGAAGAAAAAATGTAAGGCAATCAGTCTTGAGGTCGGCAACAGATTGATCGAAGCTGAGGAATTCAGGGAGAGGAAACCAGTTGACAAAGGAGTGAAGCTTCTGGCTTACAAGGAGTTTGAAAATGAATCTAATGGCTATGGGAGTGAATCAGAGGAAGATGAACCTAAGGCTACTTCGCCGATGAAAGCTGCTCCAGTAGAAAAGAAAGTGTCCAAGAAAAGAAAAGCTTCAAAGATAATTCGCAACTCAAAGAGGAAGAAAAATAAATCTTGCCCTTCTGAAGAATTTCCAACTATCATAGCAGATGTTCAGCACACTACTGAAGAGCATGAAGAAAGAAATCATCCGAAGTCTGGCCTACCACAAAAGGTCCTAGTCAGTGCAAATGATTCATCCAGCAGTTCTAGTGAATGTGAATCGGATACATCCAACAGCATTGAAATTGATGGAAGAAGCAACAACATCATTAAGACAACTGCCAATGCAGAGAGGGTTGATCAGCTTGGAGTTGGCGGGAGACATATTGAGTTGTCTGACACAGCTGGTGGAAGTAAAAAGGGTCCTAGTAGAAGTAGTCGCCGTAAGAAGGCAAAAAGACGTTGGTTGAGGGAAAAAGCTCAAAATGAAGAGCCACAGCAGCAGTTATTTGAAACAAGTATTGATCAAGCTCCTAGTCAAAATGGTGATGTTGATATGGACGACGACGATGACACTGTTCCTGTGGTAGTCAAGCCAGGACACATTCGCTTTGAGCCAGTTGGAAAAGTTGCTGCGGATCAGTCTGGGCAACAAAAGCAAAACCATTTCCCTAAGGAAACATTGCATTGGAATGGCATAACCAACAAGAAGAAAGGTCAAAAATGGGGCAAAGAGAAAACTCCATCTTGGAAGAGGAACAATTCTAACAATTGTACAAGCGAAACTCTTCAGTTGCCTACTTCTGAAACTGAGCAACCTACAACGCCAGCACCTGTAATTGGTCCCATAAATTTTGATGAACTTAGACCATGCACTGGCTTGCCTCAGGAAGGTGATTTAGTTGCGTATCGTTTGATTGAGTTATCCTCAACCTGGACACCTGAGATTTCCTCCTTCCGAGCTGGAAAAGTATCATGGTATGACATTGAATCCAATCGAATTATGCTAATACCAGTTCCAGAATACCCATTACCTGTCAAAAAAGAGATAGACGAGGATTCTGGACTACAATTAGATACAACCCCATATGGGGAAGATGGCTCTTTAAAGATAGATTTTGCCTCTCTTGTTGATCTTCGGCTTATCAAGCAAGGAAACTTGGATTCTTCAAAAACTGCAGTTAACCAGGAAATCACTTCCGCTAAACAAAGTGCAGAAAGTTCCAGGCTCGCCCATGACAAGGGAGATGCCAACGACACTAAACAAGGTAATGGAAAAGTAAGTGCGTGGGATGAAATCAGCAAGGCTCTTAGTGCAAAGAAAGCGGAACTTTCTAAGAATGATGGTTGGAATCGAGAAGAAACTTCAGTAAGGAGGTCAGATGATTGGAATCAAGAAGAAAGTTCAGGAAGGAGGTCATGGTCCTATAGGTCACTCAGAGGCAGCGCCCTCGGTCCAACAATGGCTCTATTAAGAGCTCAGAATGAACTCTAA
Protein sequence
MMDKLMKEERSIATLILWNLWTYRNIVLFNGSKADKGMIINIIEKSIEEHLKVRNDNLNIPRPESHRSQAFWSPHSPVPKAKRRRILEQLKADQRTRWGGSEGHFTAAEPPTTARGHLTTDEGLTSPRGLTSSKLCTSLFRFRVLRSSPPFLSLWCTMEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLAYKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEEFPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNIIKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQLFETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPINFDELRPCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPLPVKKEIDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQSAESSRLAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWNQEESSGRRSWSYRSLRGSALGPTMALLRAQNEL
Homology
BLAST of Lag0039942 vs. NCBI nr
Match:
XP_038892497.1 (coilin isoform X1 [Benincasa hispida])
HSP 1 Score: 997.7 bits (2578), Expect = 5.8e-287
Identity = 534/655 (81.53%), Postives = 566/655 (86.41%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRVLFKDKD+LTESL+GLSRSWIVLKPHLRTISDLS+YILSVF L DACPNGLIL
Sbjct: 4 MEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSAYILSVFLLDDACPNGLIL 63
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKDKDIVRVKKKK KAISL GN LIE EEFRERKPVDKGVKLLA
Sbjct: 64 SMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLSDGNGLIETEEFRERKPVDKGVKLLA 123
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENESNGY ++SEEDEP AT P+K+ PVEKKVSKKRKASKIIRNSKRKKNK PSEE
Sbjct: 124 DKEFENESNGYETQSEEDEPNATLPVKSVPVEKKVSKKRKASKIIRNSKRKKNKRSPSEE 183
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FPTI+ADVQH E+ EERNH KS L QKVLVS NDS+SSSS+CE DTS+S+EI+GRSNNI
Sbjct: 184 FPTIVADVQHANEKREERNHLKSNLLQKVLVSKNDSTSSSSKCELDTSSSLEIEGRSNNI 243
Query: 398 IKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQL 457
IK+T NAERVDQLG GGRH+ELSDTAG SKKGPSRSSRRKKAKRRWLRE+AQNEE QQQL
Sbjct: 244 IKSTNNAERVDQLGAGGRHVELSDTAGDSKKGPSRSSRRKKAKRRWLRERAQNEEQQQQL 303
Query: 458 FETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETLH 517
FETS+DQ SQN DVDM DDDTVPVVVKPGHIRFEPVGKV DQ+ QQKQNHFPKETLH
Sbjct: 304 FETSLDQGASQNDDVDM--DDDTVPVVVKPGHIRFEPVGKVITDQARQQKQNHFPKETLH 363
Query: 518 WNGITNKKKGQKWGKEKTPSWKRNNSNNCT---------------------------SET 577
WNGITNKKKGQKWGKEKTPSWKRNNSNNCT E
Sbjct: 364 WNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSSETEQPKTPVPVAGPINFDGEP 423
Query: 578 LQLPTSETEQPTTPAPVIGPINFDELRPCTGLPQEGDLVAYRLIELSSTWTPEISSFRAG 637
LQLP+SETEQP TP PV GPINFDEL+PCTGLPQEGDL+AYRLIELSSTWTPEISSFRAG
Sbjct: 424 LQLPSSETEQPKTPVPVAGPINFDELQPCTGLPQEGDLIAYRLIELSSTWTPEISSFRAG 483
Query: 638 KVSWYDIESNRIMLIPVPEYPLPVKKEIDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLI 697
KVSWY+ +SNRIMLIPVPEYPLPVKKEI+EDS L LDTTPYGEDGSLKIDFASLVDLRLI
Sbjct: 484 KVSWYEADSNRIMLIPVPEYPLPVKKEIEEDSELHLDTTPYGEDGSLKIDFASLVDLRLI 543
Query: 698 KQGNLDSSKTAVNQEITSAKQSAESSRLAHDKGDANDTKQGNGKVSAWDEISKALSAKKA 757
+QGNLDSS+TAVNQEI S KQ+ ESS+L GDANDT+QGNGKVSAWDEIS+ALSAKKA
Sbjct: 544 RQGNLDSSRTAVNQEIISTKQTVESSKLVQINGDANDTRQGNGKVSAWDEISEALSAKKA 603
Query: 758 ELSKNDGWNREETSVRRSDDWNQEESSGRRSWSYRSLRGSALGPTMALLRAQNEL 786
ELSKNDG WNQEESSGRRSWSYR+LRGSALGPTMALLRAQNEL
Sbjct: 604 ELSKNDG-------------WNQEESSGRRSWSYRALRGSALGPTMALLRAQNEL 643
BLAST of Lag0039942 vs. NCBI nr
Match:
XP_038892498.1 (coilin isoform X2 [Benincasa hispida])
HSP 1 Score: 991.5 bits (2562), Expect = 4.2e-285
Identity = 533/655 (81.37%), Postives = 565/655 (86.26%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRVLFKDKD+LTESL+GLSRSWIVLKPHLRTISDLS+YILSVF L DACPNGLIL
Sbjct: 4 MEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSAYILSVFLLDDACPNGLIL 63
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKDKDIVRVKKKK KAISL GN LIE EEFRERKPVDKGVKLLA
Sbjct: 64 SMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLSDGNGLIETEEFRERKPVDKGVKLLA 123
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENESNGY ++SEEDEP AT P+K+ PVEKKVSKKRKASKIIRNSKRKKNK PSEE
Sbjct: 124 DKEFENESNGYETQSEEDEPNATLPVKSVPVEKKVSKKRKASKIIRNSKRKKNKRSPSEE 183
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FPTI+ADVQH E+ EERNH KS L QKVLVS NDS+SSSS+CE DTS+S+EI+GRSNNI
Sbjct: 184 FPTIVADVQHANEKREERNHLKSNLLQKVLVSKNDSTSSSSKCELDTSSSLEIEGRSNNI 243
Query: 398 IKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQL 457
IK+T NAERVDQLG GGRH+ELSDTAG SKKGPSRSSRRKKAKRRWLRE+AQNEE QQL
Sbjct: 244 IKSTNNAERVDQLGAGGRHVELSDTAGDSKKGPSRSSRRKKAKRRWLRERAQNEE--QQL 303
Query: 458 FETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETLH 517
FETS+DQ SQN DVDM DDDTVPVVVKPGHIRFEPVGKV DQ+ QQKQNHFPKETLH
Sbjct: 304 FETSLDQGASQNDDVDM--DDDTVPVVVKPGHIRFEPVGKVITDQARQQKQNHFPKETLH 363
Query: 518 WNGITNKKKGQKWGKEKTPSWKRNNSNNCT---------------------------SET 577
WNGITNKKKGQKWGKEKTPSWKRNNSNNCT E
Sbjct: 364 WNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSSETEQPKTPVPVAGPINFDGEP 423
Query: 578 LQLPTSETEQPTTPAPVIGPINFDELRPCTGLPQEGDLVAYRLIELSSTWTPEISSFRAG 637
LQLP+SETEQP TP PV GPINFDEL+PCTGLPQEGDL+AYRLIELSSTWTPEISSFRAG
Sbjct: 424 LQLPSSETEQPKTPVPVAGPINFDELQPCTGLPQEGDLIAYRLIELSSTWTPEISSFRAG 483
Query: 638 KVSWYDIESNRIMLIPVPEYPLPVKKEIDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLI 697
KVSWY+ +SNRIMLIPVPEYPLPVKKEI+EDS L LDTTPYGEDGSLKIDFASLVDLRLI
Sbjct: 484 KVSWYEADSNRIMLIPVPEYPLPVKKEIEEDSELHLDTTPYGEDGSLKIDFASLVDLRLI 543
Query: 698 KQGNLDSSKTAVNQEITSAKQSAESSRLAHDKGDANDTKQGNGKVSAWDEISKALSAKKA 757
+QGNLDSS+TAVNQEI S KQ+ ESS+L GDANDT+QGNGKVSAWDEIS+ALSAKKA
Sbjct: 544 RQGNLDSSRTAVNQEIISTKQTVESSKLVQINGDANDTRQGNGKVSAWDEISEALSAKKA 603
Query: 758 ELSKNDGWNREETSVRRSDDWNQEESSGRRSWSYRSLRGSALGPTMALLRAQNEL 786
ELSKNDG WNQEESSGRRSWSYR+LRGSALGPTMALLRAQNEL
Sbjct: 604 ELSKNDG-------------WNQEESSGRRSWSYRALRGSALGPTMALLRAQNEL 641
BLAST of Lag0039942 vs. NCBI nr
Match:
XP_008446142.1 (PREDICTED: coilin isoform X1 [Cucumis melo])
HSP 1 Score: 985.3 bits (2546), Expect = 3.0e-283
Identity = 524/628 (83.44%), Postives = 560/628 (89.17%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRV FKDKD+LT+SL+GLSRSWI LKPHLRTISDLSSYILSVFRLHDACPNG+IL
Sbjct: 2 MEAVRLRVSFKDKDLLTDSLTGLSRSWIFLKPHLRTISDLSSYILSVFRLHDACPNGVIL 61
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKD+DIVRVKKKK KA L G+RLIE EEFRERKPVD GVK LA
Sbjct: 62 SMDGFVLPPFESVCILKDRDIVRVKKKKSKATILGEGDRLIETEEFRERKPVDNGVKFLA 121
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENESNGY S+SEEDE AT P+KA PV KKVSKKRKASKII NSKRKKNKS P+EE
Sbjct: 122 DKEFENESNGYESQSEEDETNATLPVKAVPVGKKVSKKRKASKIIHNSKRKKNKSSPTEE 181
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FPTIIADV+HT E+HEERNH KS LPQKVLVS DSSSSSSEC+SDTS+SIEI G+SNNI
Sbjct: 182 FPTIIADVRHTDEKHEERNHLKSNLPQKVLVSKKDSSSSSSECDSDTSSSIEIGGKSNNI 241
Query: 398 IKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQL 457
IK+T NAERVDQLG G H+ELSDTAG SKKGPSRS+RRKKAKRRWLRE+AQNEE QQQL
Sbjct: 242 IKSTTNAERVDQLGAGRTHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQQL 301
Query: 458 FETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETLH 517
FET++DQ PSQN DVDM DDDTVPVVVKPGHIRFEPVGKV DQ+GQ+K+NHFPKETLH
Sbjct: 302 FETNLDQGPSQNDDVDM--DDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKENHFPKETLH 361
Query: 518 WNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPINFDELR 577
WNGITNKKKGQKWGKEKTPSWKRNNSN CTSE LQL SETEQP TP PV+G INFDELR
Sbjct: 362 WNGITNKKKGQKWGKEKTPSWKRNNSNVCTSEPLQL-LSETEQPKTPVPVVGSINFDELR 421
Query: 578 PCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPLPVKKE 637
P TGLPQEGDL+AYRLIELSSTWTPEISSFRAGKVSWYD ESNRIMLIPVPEYP+PVKKE
Sbjct: 422 PYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPIPVKKE 481
Query: 638 IDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQSAESSR 697
IDEDS LQ DTTPYGEDGSLKIDFASLVDLRLI+QGNLDSS+TAVNQEITS KQ AESS+
Sbjct: 482 IDEDSELQSDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS-KQIAESSK 541
Query: 698 LAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWNQEESS 757
H+ GDANDT+QGNGKVSAWDEIS+ALSAKK ELSKN+G WNQEESS
Sbjct: 542 HVHNNGDANDTRQGNGKVSAWDEISEALSAKKVELSKNNG-------------WNQEESS 601
Query: 758 GRRSWSYRSLRGSALGPTMALLRAQNEL 786
GR+SWSYR+LRGSALGPTMALLR+Q EL
Sbjct: 602 GRKSWSYRALRGSALGPTMALLRSQKEL 612
BLAST of Lag0039942 vs. NCBI nr
Match:
KAA0034262.1 (coilin isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 980.7 bits (2534), Expect = 7.3e-282
Identity = 524/629 (83.31%), Postives = 560/629 (89.03%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRV FKDKD+LT+SL+GLSRSWI LKPHLRTISDLSSYILSVFRLHDACPNG+IL
Sbjct: 2 MEAVRLRVSFKDKDLLTDSLTGLSRSWIFLKPHLRTISDLSSYILSVFRLHDACPNGVIL 61
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKD+DIVRVKKKK KA L G+RLIE EEFRERKPVD GVK LA
Sbjct: 62 SMDGFVLPPFESVCILKDRDIVRVKKKKSKATILGEGDRLIETEEFRERKPVDNGVKFLA 121
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENESNGY S+SEEDE AT P+KA PV KKVSKKRKASKII NSKRKKNKS P+EE
Sbjct: 122 DKEFENESNGYESQSEEDETNATLPVKAVPVGKKVSKKRKASKIIHNSKRKKNKSSPTEE 181
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FPTIIADV+HT E+HEERNH KS LPQKVLVS DSSSSSSEC+SDTS+SIEI G+SNNI
Sbjct: 182 FPTIIADVRHTDEKHEERNHLKSNLPQKVLVSKKDSSSSSSECDSDTSSSIEIGGKSNNI 241
Query: 398 IKTTANAER-VDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQ 457
IK+T NAER VDQLG G H+ELSDTAG SKKGPSRS+RRKKAKRRWLRE+AQNEE QQQ
Sbjct: 242 IKSTTNAERWVDQLGAGRTHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQQ 301
Query: 458 LFETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETL 517
LFET++DQ PSQN DVDM DDDTVPVVVKPGHIRFEPVGKV DQ+GQ+K+NHFPKETL
Sbjct: 302 LFETNLDQGPSQNDDVDM--DDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKENHFPKETL 361
Query: 518 HWNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPINFDEL 577
HWNGITNKKKGQKWGKEKTPSWKRNNSN CTSE LQL SETEQP TP PV+G INFDEL
Sbjct: 362 HWNGITNKKKGQKWGKEKTPSWKRNNSNVCTSEPLQL-LSETEQPKTPVPVVGSINFDEL 421
Query: 578 RPCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPLPVKK 637
RP TGLPQEGDL+AYRLIELSSTWTPEISSFRAGKVSWYD ESNRIMLIPVPEYP+PVKK
Sbjct: 422 RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPIPVKK 481
Query: 638 EIDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQSAESS 697
EIDEDS LQ DTTPYGEDGSLKIDFASLVDLRLI+QGNLDSS+TAVNQEITS KQ AESS
Sbjct: 482 EIDEDSELQSDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS-KQIAESS 541
Query: 698 RLAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWNQEES 757
+ H+ GDANDT+QGNGKVSAWDEIS+ALSAKK ELSKN+G WNQEES
Sbjct: 542 KHVHNNGDANDTRQGNGKVSAWDEISEALSAKKVELSKNNG-------------WNQEES 601
Query: 758 SGRRSWSYRSLRGSALGPTMALLRAQNEL 786
SGR+SWSYR+LRGSALGPTMALLR+Q EL
Sbjct: 602 SGRKSWSYRALRGSALGPTMALLRSQKEL 613
BLAST of Lag0039942 vs. NCBI nr
Match:
XP_008446143.1 (PREDICTED: coilin isoform X2 [Cucumis melo])
HSP 1 Score: 979.2 bits (2530), Expect = 2.1e-281
Identity = 523/628 (83.28%), Postives = 559/628 (89.01%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRV FKDKD+LT+SL+GLSRSWI LKPHLRTISDLSSYILSVFRLHDACPNG+IL
Sbjct: 2 MEAVRLRVSFKDKDLLTDSLTGLSRSWIFLKPHLRTISDLSSYILSVFRLHDACPNGVIL 61
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKD+DIVRVKKKK KA L G+RLIE EEFRERKPVD GVK LA
Sbjct: 62 SMDGFVLPPFESVCILKDRDIVRVKKKKSKATILGEGDRLIETEEFRERKPVDNGVKFLA 121
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENESNGY S+SEEDE AT P+KA PV KKVSKKRKASKII NSKRKKNKS P+EE
Sbjct: 122 DKEFENESNGYESQSEEDETNATLPVKAVPVGKKVSKKRKASKIIHNSKRKKNKSSPTEE 181
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FPTIIADV+HT E+HEERNH KS LPQKVLVS DSSSSSSEC+SDTS+SIEI G+SNNI
Sbjct: 182 FPTIIADVRHTDEKHEERNHLKSNLPQKVLVSKKDSSSSSSECDSDTSSSIEIGGKSNNI 241
Query: 398 IKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQL 457
IK+T NAERVDQLG G H+ELSDTAG SKKGPSRS+RRKKAKRRWLRE+AQNEE QQL
Sbjct: 242 IKSTTNAERVDQLGAGRTHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEE--QQL 301
Query: 458 FETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETLH 517
FET++DQ PSQN DVDM DDDTVPVVVKPGHIRFEPVGKV DQ+GQ+K+NHFPKETLH
Sbjct: 302 FETNLDQGPSQNDDVDM--DDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKENHFPKETLH 361
Query: 518 WNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPINFDELR 577
WNGITNKKKGQKWGKEKTPSWKRNNSN CTSE LQL SETEQP TP PV+G INFDELR
Sbjct: 362 WNGITNKKKGQKWGKEKTPSWKRNNSNVCTSEPLQL-LSETEQPKTPVPVVGSINFDELR 421
Query: 578 PCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPLPVKKE 637
P TGLPQEGDL+AYRLIELSSTWTPEISSFRAGKVSWYD ESNRIMLIPVPEYP+PVKKE
Sbjct: 422 PYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPIPVKKE 481
Query: 638 IDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQSAESSR 697
IDEDS LQ DTTPYGEDGSLKIDFASLVDLRLI+QGNLDSS+TAVNQEITS KQ AESS+
Sbjct: 482 IDEDSELQSDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS-KQIAESSK 541
Query: 698 LAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWNQEESS 757
H+ GDANDT+QGNGKVSAWDEIS+ALSAKK ELSKN+G WNQEESS
Sbjct: 542 HVHNNGDANDTRQGNGKVSAWDEISEALSAKKVELSKNNG-------------WNQEESS 601
Query: 758 GRRSWSYRSLRGSALGPTMALLRAQNEL 786
GR+SWSYR+LRGSALGPTMALLR+Q EL
Sbjct: 602 GRKSWSYRALRGSALGPTMALLRSQKEL 610
BLAST of Lag0039942 vs. ExPASy Swiss-Prot
Match:
Q8RWK8 (Coilin OS=Arabidopsis thaliana OX=3702 GN=COIL PE=1 SV=1)
HSP 1 Score: 363.6 bits (932), Expect = 5.6e-99
Identity = 262/658 (39.82%), Postives = 380/658 (57.75%), Query Frame = 0
Query: 159 EAVRLRVLFKDKDVLT--ESLSGLSRSWIVL--KPHLRTISDLSSYILSVFRLHDACPNG 218
E VR+R++F+D+ +L+ + GL+RSW+VL K H RTIS+ S +I F L +ACP+G
Sbjct: 4 EKVRVRLVFEDRRILSKYQKKQGLTRSWVVLNRKCH-RTISEFSDHIFHTFSLCEACPHG 63
Query: 219 LILSMDGFVLPPFESVCILKDKDIVRVKKKK---CKAISLEVGNRLIEAEEFRERKPVDK 278
L LSM+GFVLPPFES C+LKDKDIV VKKKK + + + + A E ER +
Sbjct: 64 LSLSMEGFVLPPFESSCVLKDKDIVCVKKKKESLLEIVGEDSDENVYNAIEVEERPQIRP 123
Query: 279 GVKLLAYKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNK 338
G LLA +EF+ E+ GY SESEEDE + + + EKK SKKRK S +++KRKK K
Sbjct: 124 GEMLLANEEFQKETGGYESESEEDELEEEA--EEFVPEKKASKKRKTSSKNQSTKRKKCK 183
Query: 339 SCPSEEFPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEID 398
+EE P +E E + + +K + D S+++ D
Sbjct: 184 LDTTEESP----------DERENTAVVSNVVKKKKKKKSLDVQSANN------------D 243
Query: 399 GRSNNIIKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNE 458
++N+ K ++R Q H +L + +KK PSRS+RRKKAKR+WLREK + E
Sbjct: 244 EQNNDSTKPMTKSKRSSQQEESKEHNDLCQLSAETKKTPSRSARRKKAKRQWLREKTKLE 303
Query: 459 EPQQQLFETSIDQAPSQNGDVDMDDD-----------------------DDTVPVVVKPG 518
+++L +T + APSQ + +D D+ VPV V+PG
Sbjct: 304 --KEELLQTQLVVAPSQKPVITIDHQATKEKHCETLENQQAEEVSDGFGDEVVPVEVRPG 363
Query: 519 HIRFEPVGKVAADQSGQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTS 578
HIRF+P+ D++ + E + WNG KKKGQKWG EK+ KR +
Sbjct: 364 HIRFKPL--AGTDEASLDSEPLV--ENVLWNGNMTKKKGQKWGTEKSGFSKRYAQDFNED 423
Query: 579 ETLQLPTSETEQPTTPAPVIGPINFDELRPCTGLPQEGDLVAYRLIELSSTWTPEISSFR 638
T Q +ET PI++++L TG ++GD++AYRLIEL+S+WTPE+SSFR
Sbjct: 424 ATTQPAEAETLANC-------PIDYEQLVAYTGSVKKGDVIAYRLIELTSSWTPEVSSFR 483
Query: 639 AGKVSWYDIESNRIMLIPVPEYPLPVKKEIDEDSGLQLDTTPYGEDGSLKIDFASLVDLR 698
GK+S+YD +S + L+PV E+P+ K E D+D +Q DT+ Y EDGSL+I+F++L+D+R
Sbjct: 484 VGKISYYDPDSKMVTLMPVQEFPIEKKTEEDDDFCMQPDTSLYKEDGSLEIEFSALLDVR 543
Query: 699 LIKQGNLDSSKTAVNQEITSAKQSAESSRLAHDKGDANDTKQGNGKVSAWDEISKALSAK 758
+K + DS++ A + QSA+ +L+ +K K+ NG+VS W+E+S+ALSAK
Sbjct: 544 SVKTSSSDSAEVA-KSALPEPDQSAKKPKLSANKELQTPAKE-NGEVSPWEELSEALSAK 603
Query: 759 KAELSK-NDGWNREETSVRRSDDWNQEESSGRRSWSYRSLRGSALGPTMALLRAQNEL 786
KA LS+ N+GWN+ + SS SWSY++LRGSA+GP M LR+Q E+
Sbjct: 604 KAALSQANNGWNK-------------KGSSSGGSWSYKALRGSAMGPVMNYLRSQKEI 608
BLAST of Lag0039942 vs. ExPASy TrEMBL
Match:
A0A1S3BF15 (Coilin OS=Cucumis melo OX=3656 GN=LOC103488955 PE=3 SV=1)
HSP 1 Score: 985.3 bits (2546), Expect = 1.4e-283
Identity = 524/628 (83.44%), Postives = 560/628 (89.17%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRV FKDKD+LT+SL+GLSRSWI LKPHLRTISDLSSYILSVFRLHDACPNG+IL
Sbjct: 2 MEAVRLRVSFKDKDLLTDSLTGLSRSWIFLKPHLRTISDLSSYILSVFRLHDACPNGVIL 61
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKD+DIVRVKKKK KA L G+RLIE EEFRERKPVD GVK LA
Sbjct: 62 SMDGFVLPPFESVCILKDRDIVRVKKKKSKATILGEGDRLIETEEFRERKPVDNGVKFLA 121
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENESNGY S+SEEDE AT P+KA PV KKVSKKRKASKII NSKRKKNKS P+EE
Sbjct: 122 DKEFENESNGYESQSEEDETNATLPVKAVPVGKKVSKKRKASKIIHNSKRKKNKSSPTEE 181
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FPTIIADV+HT E+HEERNH KS LPQKVLVS DSSSSSSEC+SDTS+SIEI G+SNNI
Sbjct: 182 FPTIIADVRHTDEKHEERNHLKSNLPQKVLVSKKDSSSSSSECDSDTSSSIEIGGKSNNI 241
Query: 398 IKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQL 457
IK+T NAERVDQLG G H+ELSDTAG SKKGPSRS+RRKKAKRRWLRE+AQNEE QQQL
Sbjct: 242 IKSTTNAERVDQLGAGRTHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQQL 301
Query: 458 FETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETLH 517
FET++DQ PSQN DVDM DDDTVPVVVKPGHIRFEPVGKV DQ+GQ+K+NHFPKETLH
Sbjct: 302 FETNLDQGPSQNDDVDM--DDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKENHFPKETLH 361
Query: 518 WNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPINFDELR 577
WNGITNKKKGQKWGKEKTPSWKRNNSN CTSE LQL SETEQP TP PV+G INFDELR
Sbjct: 362 WNGITNKKKGQKWGKEKTPSWKRNNSNVCTSEPLQL-LSETEQPKTPVPVVGSINFDELR 421
Query: 578 PCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPLPVKKE 637
P TGLPQEGDL+AYRLIELSSTWTPEISSFRAGKVSWYD ESNRIMLIPVPEYP+PVKKE
Sbjct: 422 PYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPIPVKKE 481
Query: 638 IDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQSAESSR 697
IDEDS LQ DTTPYGEDGSLKIDFASLVDLRLI+QGNLDSS+TAVNQEITS KQ AESS+
Sbjct: 482 IDEDSELQSDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS-KQIAESSK 541
Query: 698 LAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWNQEESS 757
H+ GDANDT+QGNGKVSAWDEIS+ALSAKK ELSKN+G WNQEESS
Sbjct: 542 HVHNNGDANDTRQGNGKVSAWDEISEALSAKKVELSKNNG-------------WNQEESS 601
Query: 758 GRRSWSYRSLRGSALGPTMALLRAQNEL 786
GR+SWSYR+LRGSALGPTMALLR+Q EL
Sbjct: 602 GRKSWSYRALRGSALGPTMALLRSQKEL 612
BLAST of Lag0039942 vs. ExPASy TrEMBL
Match:
A0A5A7ST29 (Coilin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G002610 PE=3 SV=1)
HSP 1 Score: 980.7 bits (2534), Expect = 3.5e-282
Identity = 524/629 (83.31%), Postives = 560/629 (89.03%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRV FKDKD+LT+SL+GLSRSWI LKPHLRTISDLSSYILSVFRLHDACPNG+IL
Sbjct: 2 MEAVRLRVSFKDKDLLTDSLTGLSRSWIFLKPHLRTISDLSSYILSVFRLHDACPNGVIL 61
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKD+DIVRVKKKK KA L G+RLIE EEFRERKPVD GVK LA
Sbjct: 62 SMDGFVLPPFESVCILKDRDIVRVKKKKSKATILGEGDRLIETEEFRERKPVDNGVKFLA 121
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENESNGY S+SEEDE AT P+KA PV KKVSKKRKASKII NSKRKKNKS P+EE
Sbjct: 122 DKEFENESNGYESQSEEDETNATLPVKAVPVGKKVSKKRKASKIIHNSKRKKNKSSPTEE 181
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FPTIIADV+HT E+HEERNH KS LPQKVLVS DSSSSSSEC+SDTS+SIEI G+SNNI
Sbjct: 182 FPTIIADVRHTDEKHEERNHLKSNLPQKVLVSKKDSSSSSSECDSDTSSSIEIGGKSNNI 241
Query: 398 IKTTANAER-VDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQ 457
IK+T NAER VDQLG G H+ELSDTAG SKKGPSRS+RRKKAKRRWLRE+AQNEE QQQ
Sbjct: 242 IKSTTNAERWVDQLGAGRTHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQQ 301
Query: 458 LFETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETL 517
LFET++DQ PSQN DVDM DDDTVPVVVKPGHIRFEPVGKV DQ+GQ+K+NHFPKETL
Sbjct: 302 LFETNLDQGPSQNDDVDM--DDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKENHFPKETL 361
Query: 518 HWNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPINFDEL 577
HWNGITNKKKGQKWGKEKTPSWKRNNSN CTSE LQL SETEQP TP PV+G INFDEL
Sbjct: 362 HWNGITNKKKGQKWGKEKTPSWKRNNSNVCTSEPLQL-LSETEQPKTPVPVVGSINFDEL 421
Query: 578 RPCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPLPVKK 637
RP TGLPQEGDL+AYRLIELSSTWTPEISSFRAGKVSWYD ESNRIMLIPVPEYP+PVKK
Sbjct: 422 RPYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPIPVKK 481
Query: 638 EIDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQSAESS 697
EIDEDS LQ DTTPYGEDGSLKIDFASLVDLRLI+QGNLDSS+TAVNQEITS KQ AESS
Sbjct: 482 EIDEDSELQSDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS-KQIAESS 541
Query: 698 RLAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWNQEES 757
+ H+ GDANDT+QGNGKVSAWDEIS+ALSAKK ELSKN+G WNQEES
Sbjct: 542 KHVHNNGDANDTRQGNGKVSAWDEISEALSAKKVELSKNNG-------------WNQEES 601
Query: 758 SGRRSWSYRSLRGSALGPTMALLRAQNEL 786
SGR+SWSYR+LRGSALGPTMALLR+Q EL
Sbjct: 602 SGRKSWSYRALRGSALGPTMALLRSQKEL 613
BLAST of Lag0039942 vs. ExPASy TrEMBL
Match:
A0A1S3BF70 (Coilin OS=Cucumis melo OX=3656 GN=LOC103488955 PE=3 SV=1)
HSP 1 Score: 979.2 bits (2530), Expect = 1.0e-281
Identity = 523/628 (83.28%), Postives = 559/628 (89.01%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRV FKDKD+LT+SL+GLSRSWI LKPHLRTISDLSSYILSVFRLHDACPNG+IL
Sbjct: 2 MEAVRLRVSFKDKDLLTDSLTGLSRSWIFLKPHLRTISDLSSYILSVFRLHDACPNGVIL 61
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKD+DIVRVKKKK KA L G+RLIE EEFRERKPVD GVK LA
Sbjct: 62 SMDGFVLPPFESVCILKDRDIVRVKKKKSKATILGEGDRLIETEEFRERKPVDNGVKFLA 121
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENESNGY S+SEEDE AT P+KA PV KKVSKKRKASKII NSKRKKNKS P+EE
Sbjct: 122 DKEFENESNGYESQSEEDETNATLPVKAVPVGKKVSKKRKASKIIHNSKRKKNKSSPTEE 181
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FPTIIADV+HT E+HEERNH KS LPQKVLVS DSSSSSSEC+SDTS+SIEI G+SNNI
Sbjct: 182 FPTIIADVRHTDEKHEERNHLKSNLPQKVLVSKKDSSSSSSECDSDTSSSIEIGGKSNNI 241
Query: 398 IKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQL 457
IK+T NAERVDQLG G H+ELSDTAG SKKGPSRS+RRKKAKRRWLRE+AQNEE QQL
Sbjct: 242 IKSTTNAERVDQLGAGRTHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEE--QQL 301
Query: 458 FETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETLH 517
FET++DQ PSQN DVDM DDDTVPVVVKPGHIRFEPVGKV DQ+GQ+K+NHFPKETLH
Sbjct: 302 FETNLDQGPSQNDDVDM--DDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKENHFPKETLH 361
Query: 518 WNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPINFDELR 577
WNGITNKKKGQKWGKEKTPSWKRNNSN CTSE LQL SETEQP TP PV+G INFDELR
Sbjct: 362 WNGITNKKKGQKWGKEKTPSWKRNNSNVCTSEPLQL-LSETEQPKTPVPVVGSINFDELR 421
Query: 578 PCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPLPVKKE 637
P TGLPQEGDL+AYRLIELSSTWTPEISSFRAGKVSWYD ESNRIMLIPVPEYP+PVKKE
Sbjct: 422 PYTGLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPIPVKKE 481
Query: 638 IDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQSAESSR 697
IDEDS LQ DTTPYGEDGSLKIDFASLVDLRLI+QGNLDSS+TAVNQEITS KQ AESS+
Sbjct: 482 IDEDSELQSDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS-KQIAESSK 541
Query: 698 LAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWNQEESS 757
H+ GDANDT+QGNGKVSAWDEIS+ALSAKK ELSKN+G WNQEESS
Sbjct: 542 HVHNNGDANDTRQGNGKVSAWDEISEALSAKKVELSKNNG-------------WNQEESS 601
Query: 758 GRRSWSYRSLRGSALGPTMALLRAQNEL 786
GR+SWSYR+LRGSALGPTMALLR+Q EL
Sbjct: 602 GRKSWSYRALRGSALGPTMALLRSQKEL 610
BLAST of Lag0039942 vs. ExPASy TrEMBL
Match:
A0A6J1DEE4 (Coilin OS=Momordica charantia OX=3673 GN=LOC111019678 PE=3 SV=1)
HSP 1 Score: 972.6 bits (2513), Expect = 9.7e-280
Identity = 523/633 (82.62%), Postives = 556/633 (87.84%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLS--GLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGL 217
ME VRLRVLF+DKD+LTESLS GLSRSWIVLK HLRTISDLSSYILSVFRL DACP GL
Sbjct: 2 METVRLRVLFRDKDLLTESLSKEGLSRSWIVLKSHLRTISDLSSYILSVFRLQDACPCGL 61
Query: 218 ILSMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKL 277
ILSMDGFVLPPFESVCILKDKDIVRVKK+K KAI+L+VGN LI EEFRERKPVD GVKL
Sbjct: 62 ILSMDGFVLPPFESVCILKDKDIVRVKKRKSKAINLKVGNGLIVTEEFRERKPVDNGVKL 121
Query: 278 LAYKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPS 337
LA KEFENES+GY SESEE++PKAT P++A+PV KKVSKKRKASKIIRNSKRKKNKS P+
Sbjct: 122 LADKEFENESDGYESESEEEKPKATLPVEASPVMKKVSKKRKASKIIRNSKRKKNKSSPT 181
Query: 338 EEFPTIIADVQHTTEEHEERNH---PKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDG 397
EEFPTIIADVQH E+HEE H KS LPQKVLV+ NDSSSSSSECESDTSN+ EIDG
Sbjct: 182 EEFPTIIADVQHANEKHEEIKHLKSNKSNLPQKVLVNKNDSSSSSSECESDTSNTTEIDG 241
Query: 398 RSNNIIKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEE 457
RS N I++TANA+R+DQLGVG RH+E S TA SKKGPSRSSRRKKAKRRWLREKAQNEE
Sbjct: 242 RSKNTIESTANADRIDQLGVGRRHVESSKTASESKKGPSRSSRRKKAKRRWLREKAQNEE 301
Query: 458 PQQQLFETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFP 517
QQQL ETSIDQ PSQN DVDM DD+TVPVVVKPGHIRFEP+GKVAADQ+G+QKQ+HFP
Sbjct: 302 RQQQLLETSIDQGPSQNDDVDM--DDETVPVVVKPGHIRFEPIGKVAADQAGEQKQDHFP 361
Query: 518 KETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPIN 577
ETLHWNGITNKKKGQKWGKEKTPSWKRNNSNN T E LQLPTSETEQP P PV+GPIN
Sbjct: 362 TETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNFTGEPLQLPTSETEQPKAPEPVVGPIN 421
Query: 578 FDELRPCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPL 637
FDELRPCTG PQEGDLVAYRLIELSSTWTPEISSFR GKVSWYDIESNRIMLIPVPEYPL
Sbjct: 422 FDELRPCTGSPQEGDLVAYRLIELSSTWTPEISSFRVGKVSWYDIESNRIMLIPVPEYPL 481
Query: 638 PVKKEIDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQS 697
KKEIDEDS Q DTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSK AVN+EITS Q+
Sbjct: 482 SFKKEIDEDSASQSDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKAAVNKEITSVNQT 541
Query: 698 AESSRLAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWN 757
AESS H+ GDAN+ KQGNGKVSAWDEIS+ALSAKKAELS+NDG WN
Sbjct: 542 AESSMPIHNNGDANNAKQGNGKVSAWDEISEALSAKKAELSQNDG-------------WN 601
Query: 758 QEESSGRRSWSYRSLRGSALGPTMALLRAQNEL 786
QEESSGRRSWS+R LRGSALGP MALLRAQNEL
Sbjct: 602 QEESSGRRSWSHRGLRGSALGPVMALLRAQNEL 619
BLAST of Lag0039942 vs. ExPASy TrEMBL
Match:
A0A6J1H0F7 (Coilin OS=Cucurbita moschata OX=3662 GN=LOC111458457 PE=3 SV=1)
HSP 1 Score: 965.3 bits (2494), Expect = 1.5e-277
Identity = 519/628 (82.64%), Postives = 553/628 (88.06%), Query Frame = 0
Query: 158 MEAVRLRVLFKDKDVLTESLSGLSRSWIVLKPHLRTISDLSSYILSVFRLHDACPNGLIL 217
MEAVRLRV FKDKD+LTESL+GL RSWIVLKPHLRTISDLSSYILSVF LHDACPNGL L
Sbjct: 2 MEAVRLRVSFKDKDLLTESLTGLRRSWIVLKPHLRTISDLSSYILSVFHLHDACPNGLAL 61
Query: 218 SMDGFVLPPFESVCILKDKDIVRVKKKKCKAISLEVGNRLIEAEEFRERKPVDKGVKLLA 277
SMDGFVLPPFESVCILKDKDIVRVKKKK KAI +EFRE+K VD+GVKLLA
Sbjct: 62 SMDGFVLPPFESVCILKDKDIVRVKKKKSKAI-----------KEFREKKLVDEGVKLLA 121
Query: 278 YKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNKSCPSEE 337
KEFENES+GY SE EEDEP+AT P+ APVEKKVSKKRKASKI NSKRKK KS +EE
Sbjct: 122 DKEFENESDGYESEPEEDEPQATLPVTTAPVEKKVSKKRKASKITPNSKRKKTKSSRTEE 181
Query: 338 FPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEIDGRSNNI 397
FP+IIADVQ ++HEERNH K LPQKV+V NDSS SSSEC+S + IEIDGRSNNI
Sbjct: 182 FPSIIADVQPANKKHEERNHLKFELPQKVVVRKNDSSRSSSECQSHSLKIIEIDGRSNNI 241
Query: 398 IKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNEEPQQQL 457
IK+TANAERVDQLGVGGR +ELSDTAG +KKGPSRS+RRKKAKR+WLRE+AQ+EE QQQL
Sbjct: 242 IKSTANAERVDQLGVGGRKVELSDTAGENKKGPSRSTRRKKAKRQWLRERAQSEEQQQQL 301
Query: 458 FETSIDQAPSQNGDVDMDDDDDTVPVVVKPGHIRFEPVGKVAADQSGQQKQNHFPKETLH 517
FETSI Q PS N DVDM D+DTVPVVVKPGHIRFEPVGKVAAD +GQQKQNHFPKETLH
Sbjct: 302 FETSIYQGPSHNDDVDM--DEDTVPVVVKPGHIRFEPVGKVAADPAGQQKQNHFPKETLH 361
Query: 518 WNGITNKKKGQKWGKEKTPSWKRNNSNNCTSETLQLPTSETEQPTTPAPVIGPINFDELR 577
WNGITNKKKGQKWGKEKTPSWKRNNSN+CT E LQLPTSETEQPTTPAPV+GPINFDELR
Sbjct: 362 WNGITNKKKGQKWGKEKTPSWKRNNSNSCTDEPLQLPTSETEQPTTPAPVVGPINFDELR 421
Query: 578 PCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVSWYDIESNRIMLIPVPEYPLPVKKE 637
PCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKV+WYDIESNRIML+PVPEYPLPVKKE
Sbjct: 422 PCTGLPQEGDLVAYRLIELSSTWTPEISSFRAGKVAWYDIESNRIMLVPVPEYPLPVKKE 481
Query: 638 IDEDSGLQLDTTPYGEDGSLKIDFASLVDLRLIKQGNLDSSKTAVNQEITSAKQSAESSR 697
IDEDS QLDT PYGEDGSLKIDFASLVDLRLI QGNLDSS+TAVNQEIT AKQ+AESS+
Sbjct: 482 IDEDSASQLDTNPYGEDGSLKIDFASLVDLRLIGQGNLDSSRTAVNQEITPAKQTAESSK 541
Query: 698 LAHDKGDANDTKQGNGKVSAWDEISKALSAKKAELSKNDGWNREETSVRRSDDWNQEESS 757
LAH+ GDANDTKQGNGKVSAWDEIS ALSAKKAELSK+DG NQEESS
Sbjct: 542 LAHNNGDANDTKQGNGKVSAWDEISDALSAKKAELSKDDG-------------LNQEESS 601
Query: 758 GRRSWSYRSLRGSALGPTMALLRAQNEL 786
G RSWSYR+LRGSALGPTMALLRAQNEL
Sbjct: 602 GWRSWSYRALRGSALGPTMALLRAQNEL 603
BLAST of Lag0039942 vs. TAIR 10
Match:
AT1G13030.1 (sphere organelles protein-related )
HSP 1 Score: 363.6 bits (932), Expect = 4.0e-100
Identity = 262/658 (39.82%), Postives = 380/658 (57.75%), Query Frame = 0
Query: 159 EAVRLRVLFKDKDVLT--ESLSGLSRSWIVL--KPHLRTISDLSSYILSVFRLHDACPNG 218
E VR+R++F+D+ +L+ + GL+RSW+VL K H RTIS+ S +I F L +ACP+G
Sbjct: 4 EKVRVRLVFEDRRILSKYQKKQGLTRSWVVLNRKCH-RTISEFSDHIFHTFSLCEACPHG 63
Query: 219 LILSMDGFVLPPFESVCILKDKDIVRVKKKK---CKAISLEVGNRLIEAEEFRERKPVDK 278
L LSM+GFVLPPFES C+LKDKDIV VKKKK + + + + A E ER +
Sbjct: 64 LSLSMEGFVLPPFESSCVLKDKDIVCVKKKKESLLEIVGEDSDENVYNAIEVEERPQIRP 123
Query: 279 GVKLLAYKEFENESNGYGSESEEDEPKATSPMKAAPVEKKVSKKRKASKIIRNSKRKKNK 338
G LLA +EF+ E+ GY SESEEDE + + + EKK SKKRK S +++KRKK K
Sbjct: 124 GEMLLANEEFQKETGGYESESEEDELEEEA--EEFVPEKKASKKRKTSSKNQSTKRKKCK 183
Query: 339 SCPSEEFPTIIADVQHTTEEHEERNHPKSGLPQKVLVSANDSSSSSSECESDTSNSIEID 398
+EE P +E E + + +K + D S+++ D
Sbjct: 184 LDTTEESP----------DERENTAVVSNVVKKKKKKKSLDVQSANN------------D 243
Query: 399 GRSNNIIKTTANAERVDQLGVGGRHIELSDTAGGSKKGPSRSSRRKKAKRRWLREKAQNE 458
++N+ K ++R Q H +L + +KK PSRS+RRKKAKR+WLREK + E
Sbjct: 244 EQNNDSTKPMTKSKRSSQQEESKEHNDLCQLSAETKKTPSRSARRKKAKRQWLREKTKLE 303
Query: 459 EPQQQLFETSIDQAPSQNGDVDMDDD-----------------------DDTVPVVVKPG 518
+++L +T + APSQ + +D D+ VPV V+PG
Sbjct: 304 --KEELLQTQLVVAPSQKPVITIDHQATKEKHCETLENQQAEEVSDGFGDEVVPVEVRPG 363
Query: 519 HIRFEPVGKVAADQSGQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTS 578
HIRF+P+ D++ + E + WNG KKKGQKWG EK+ KR +
Sbjct: 364 HIRFKPL--AGTDEASLDSEPLV--ENVLWNGNMTKKKGQKWGTEKSGFSKRYAQDFNED 423
Query: 579 ETLQLPTSETEQPTTPAPVIGPINFDELRPCTGLPQEGDLVAYRLIELSSTWTPEISSFR 638
T Q +ET PI++++L TG ++GD++AYRLIEL+S+WTPE+SSFR
Sbjct: 424 ATTQPAEAETLANC-------PIDYEQLVAYTGSVKKGDVIAYRLIELTSSWTPEVSSFR 483
Query: 639 AGKVSWYDIESNRIMLIPVPEYPLPVKKEIDEDSGLQLDTTPYGEDGSLKIDFASLVDLR 698
GK+S+YD +S + L+PV E+P+ K E D+D +Q DT+ Y EDGSL+I+F++L+D+R
Sbjct: 484 VGKISYYDPDSKMVTLMPVQEFPIEKKTEEDDDFCMQPDTSLYKEDGSLEIEFSALLDVR 543
Query: 699 LIKQGNLDSSKTAVNQEITSAKQSAESSRLAHDKGDANDTKQGNGKVSAWDEISKALSAK 758
+K + DS++ A + QSA+ +L+ +K K+ NG+VS W+E+S+ALSAK
Sbjct: 544 SVKTSSSDSAEVA-KSALPEPDQSAKKPKLSANKELQTPAKE-NGEVSPWEELSEALSAK 603
Query: 759 KAELSK-NDGWNREETSVRRSDDWNQEESSGRRSWSYRSLRGSALGPTMALLRAQNEL 786
KA LS+ N+GWN+ + SS SWSY++LRGSA+GP M LR+Q E+
Sbjct: 604 KAALSQANNGWNK-------------KGSSSGGSWSYKALRGSAMGPVMNYLRSQKEI 608
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8RWK8 | 5.6e-99 | 39.82 | Coilin OS=Arabidopsis thaliana OX=3702 GN=COIL PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BF15 | 1.4e-283 | 83.44 | Coilin OS=Cucumis melo OX=3656 GN=LOC103488955 PE=3 SV=1 | [more] |
A0A5A7ST29 | 3.5e-282 | 83.31 | Coilin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G002610 PE=3 SV... | [more] |
A0A1S3BF70 | 1.0e-281 | 83.28 | Coilin OS=Cucumis melo OX=3656 GN=LOC103488955 PE=3 SV=1 | [more] |
A0A6J1DEE4 | 9.7e-280 | 82.62 | Coilin OS=Momordica charantia OX=3673 GN=LOC111019678 PE=3 SV=1 | [more] |
A0A6J1H0F7 | 1.5e-277 | 82.64 | Coilin OS=Cucurbita moschata OX=3662 GN=LOC111458457 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G13030.1 | 4.0e-100 | 39.82 | sphere organelles protein-related | [more] |