Lag0039876 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039876
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Acid phosphatase/vanadium-dependent haloperoxidase-related protein
Location	chr13: 590461 .. 592534 (-)
RNA-Seq Expression	Lag0039876
Synteny	Lag0039876

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATGTGACGGCTTCATCAGGGTCGTTGATCAATGGGCCTCCTTCCAGGACGCCCTCTTCCTTTTTTTCTTCCATTTTCACGAATTTCCCACTCATTTCTGCTCTCGTTGCCTTCGCTATTGCCCAGTCCATCAAGTTCTTCACCTCCTGGTATGTTCTCTATCTCTTTCTTTTTCAAGTTTCGATTATAATCATGGAACTCGGATCCGATCGATCCAATTCTTGGTTTTCACTCAATATCGCGTACGAGCTTTCTTACTAATTAATTCTGGACTGGTTGGCTGATAATGCAAACCCCATATGACGTCGAACAATTCTTCTTTAGCTTTCGTGAATCTTGCTTTCTCTTTTGTTCAATCCTGCCCTGCGCCGCCGATCTTGAGAATATGGATAGTTTATTTAATAAAATAATTTTTCAAGACTCGTCTCTGTTATTTCGTGGGATTGTGCAATTCTTGTTCAATATTAGGTTTTCTTTAAATTTATATAGCCCATTTAATTATGAGTCGTCCGTGTACTGTTCTTGCATCTACCATCAGATTCTGGGAAGTGGAAAATGAAAAGCCGTCTGTACCCATGTGATCTGTTATTCCTCCGTCGTCCTAATCAGAAAATTGTTTCGTTTGTAGCTTTATCAACAAGACTTTAAAGAAGCTTTTGTGTTTTTTTTTTTCCCTTCTTTTGAGGGGTAAGGGGGTTAGTAGTAGCCGTTGTTCCCATGAAAGCTGGATTCTTTTTTCTTCTTCAAGACTTTAATCATGACAATGCAGACCAAATCAATTTATTGTTCTTTAACCTCTCGCAACATTGCAGGTATAAGGAAAGACGATGGGATTTTAAGAAACTAGTTGGATCTGGTGGAATGCCTTCATCTCATTCATCAACTGTTTCCGCTCTTGCTGTAGCCATTGGGCTCCAAGAAGGCTTTGGTGAATCAATCTTTGCTGTTGCATTGATCTTAGCATGTGTTGTATGGTCTCCCTACCATAAAATTCTAAAGATCCTGGAACCATTCTAATAAGATGACGTATGACATTAAGATTTTTGTGGCAGGTAATGTACGATGCAACTGGTGTAAGATTACAAGCTGGACGCCAAGCCGAGGTTATATGCTTCTTCTACTTCTTTGTTCATAACCCCCCACCCAAAAAGAAAAGCCTCCTCCTCCCTTTTTCCTTTTCTACTCAATTTCTTTCATTTGGATATTATTTTGATATCTTAAAGCTCATCTTCTTCCTTGACTGTGTTTCATTTTTTAGGTATTGAATCAAATCGTTTATGAGCTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTTGATGACATTGTGAAGTCTATAATAGATTCTTGTCTATGAAATTGATATGTTAATTAATTTGTCAATATCATATTAAATAGGCTGTATAGGTTATGCTAAACGTGGCCTTTTTACAGTTCTTTAAATTGATTTGTATTTGTTTCCTTGGTTCCTTCCTCTGGGAAAAATCAACTTTGAGATAAAAAGGGAGATTGTTCCTTTACTGCAAATTCAGGCTTCCATGACCTTATATGCATGTTGAAGATTAGGAAAACTTGATGAACCTGGTATTATGGTAAGACAGATGTTGAAAAGACTGCTTAGCTAATCATTGTCCTTTAACTATTGACTTTGGTATAATATGGAACTGGAGATGATGTAGACATGTGGGTTGCCCTTTGAATAACTGGTTTCATGAATGCTTAACAATTTCTTGGCACTTTTTGGTTTGGCTGGGAAAGTTTCAAAGAGAACCTAACTTGATGGATATTCATTTGTAGCTTTTTATGTCTACAAGAGAAGTCAGGATTACAAAAATTGTCTCACTTGAATCGGTTTGGTAGTGTAGTTGAGAATCGCTTGTTCAGTATTCACCTTCATTGAGAAAAAGATACGAGGCCTTTCTTTCTAACGTGCGGCTACATTCTATTGTATTACAGGTTATAGCTGGAGGCTTGCTTGGTATTGTCACCTCTTCAATTGGCCATTTGATGATCATACTGACTAGGTCTTGA

mRNA sequence

ATGGATGATGTGACGGCTTCATCAGGGTCGTTGATCAATGGGCCTCCTTCCAGGACGCCCTCTTCCTTTTTTTCTTCCATTTTCACGAATTTCCCACTCATTTCTGCTCTCGTTGCCTTCGCTATTGCCCAGTCCATCAAGTTCTTCACCTCCTGGTATAAGGAAAGACGATGGGATTTTAAGAAACTAGTTGGATCTGGTGGAATGCCTTCATCTCATTCATCAACTGTTTCCGCTCTTGCTGTAGCCATTGGGCTCCAAGAAGGCTTTGGTGAATCAATCTTTGCTGTTGCATTGATCTTAGCATGTGTTGTAATGTACGATGCAACTGGTGTAAGATTACAAGCTGGACGCCAAGCCGAGGTATTGAATCAAATCGTTTATGAGCTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTATAGCTGGAGGCTTGCTTGGTATTGTCACCTCTTCAATTGGCCATTTGATGATCATACTGACTAGGTCTTGA

Coding sequence (CDS)

ATGGATGATGTGACGGCTTCATCAGGGTCGTTGATCAATGGGCCTCCTTCCAGGACGCCCTCTTCCTTTTTTTCTTCCATTTTCACGAATTTCCCACTCATTTCTGCTCTCGTTGCCTTCGCTATTGCCCAGTCCATCAAGTTCTTCACCTCCTGGTATAAGGAAAGACGATGGGATTTTAAGAAACTAGTTGGATCTGGTGGAATGCCTTCATCTCATTCATCAACTGTTTCCGCTCTTGCTGTAGCCATTGGGCTCCAAGAAGGCTTTGGTGAATCAATCTTTGCTGTTGCATTGATCTTAGCATGTGTTGTAATGTACGATGCAACTGGTGTAAGATTACAAGCTGGACGCCAAGCCGAGGTATTGAATCAAATCGTTTATGAGCTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTATAGCTGGAGGCTTGCTTGGTATTGTCACCTCTTCAATTGGCCATTTGATGATCATACTGACTAGGTCTTGA

Protein sequence

MDDVTASSGSLINGPPSRTPSSFFSSIFTNFPLISALVAFAIAQSIKFFTSWYKERRWDFKKLVGSGGMPSSHSSTVSALAVAIGLQEGFGESIFAVALILACVVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMIILTRS

Homology

[Close]

BLAST of Lag0039876 vs. NCBI nr
Match: XP_008446081.1 (PREDICTED: uncharacterized membrane protein YuiD isoform X2 [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 8.4e-85
Identity = 167/176 (94.89%), Postives = 173/176 (98.30%), Query Frame = 0


Query: 1   MDDVTASSGSLINGPPSRTPSSFFSSIFTNFPLISALVAFAIAQSIKFFTSWYKERRWDF 60
           MDDVTASSGSLINGPPS TPSSF S+IFTN+PLISAL+AFAIAQSIKFFTSWYKERRWDF
Sbjct: 1   MDDVTASSGSLINGPPSHTPSSFSSTIFTNYPLISALLAFAIAQSIKFFTSWYKERRWDF 60

Query: 61  KKLVGSGGMPSSHSSTVSALAVAIGLQEGFGESIFAVALILACVVMYDATGVRLQAGRQA 120
           KKLVGSGGMPSSHSSTVSALA+AIGLQEGFG S+FAVALILACVVMYDATGVRLQAGRQA
Sbjct: 61  KKLVGSGGMPSSHSSTVSALAIAIGLQEGFGASVFAVALILACVVMYDATGVRLQAGRQA 120

Query: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMIILTRS 177
           EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMII+TRS
Sbjct: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMIIMTRS 176

[Close]

BLAST of Lag0039876 vs. NCBI nr
Match: XP_004135303.1 (uncharacterized protein LOC101208855 isoform X2 [Cucumis sativus] >KGN51694.1 hypothetical protein Csa_008259 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 166/176 (94.32%), Postives = 173/176 (98.30%), Query Frame = 0


Query: 1   MDDVTASSGSLINGPPSRTPSSFFSSIFTNFPLISALVAFAIAQSIKFFTSWYKERRWDF 60
           MDDVTASSGSLINGPPS TPSSF S+IFTN+PLISAL+AFAIAQSIKFFTSWYKERRWDF
Sbjct: 1   MDDVTASSGSLINGPPSHTPSSFSSTIFTNYPLISALLAFAIAQSIKFFTSWYKERRWDF 60

Query: 61  KKLVGSGGMPSSHSSTVSALAVAIGLQEGFGESIFAVALILACVVMYDATGVRLQAGRQA 120
           KKLVGSGGMPSSHSSTVSALA+AIGLQEGFG S+FAVALILACVVMYDATGVRLQAGRQA
Sbjct: 61  KKLVGSGGMPSSHSSTVSALAIAIGLQEGFGASVFAVALILACVVMYDATGVRLQAGRQA 120

Query: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMIILTRS 177
           EVLNQIVYELPAEHPLAESRPLRELLGHTPPQV+AGGLLGIVTSSIGHLMII+TRS
Sbjct: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVVAGGLLGIVTSSIGHLMIIMTRS 176

[Close]

BLAST of Lag0039876 vs. NCBI nr
Match: KAA0034212.1 (putative membrane protein YuiD isoform X2 [Cucumis melo var. makuwa] >TYK15708.1 putative membrane protein YuiD isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 165/174 (94.83%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MDDVTASSGSLINGPPSRTPSSFFSSIFTNFPLISALVAFAIAQSIKFFTSWYKERRWDF 60
           MDDVTASSGSLINGPPS TPSSF S+IFTN+PLISAL+AFAIAQSIKFFTSWYKERRWDF
Sbjct: 1   MDDVTASSGSLINGPPSHTPSSFSSTIFTNYPLISALLAFAIAQSIKFFTSWYKERRWDF 60

Query: 61  KKLVGSGGMPSSHSSTVSALAVAIGLQEGFGESIFAVALILACVVMYDATGVRLQAGRQA 120
           KKLVGSGGMPSSHSSTVSALA+AIGLQEGFG S+FAVALILACVVMYDATGVRLQAGRQA
Sbjct: 61  KKLVGSGGMPSSHSSTVSALAIAIGLQEGFGASVFAVALILACVVMYDATGVRLQAGRQA 120

Query: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMIILT 175
           EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMII+T
Sbjct: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMIIMT 174

[Close]

BLAST of Lag0039876 vs. NCBI nr
Match: XP_038891333.1 (uncharacterized membrane protein YuiD-like isoform X1 [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 1.0e-82
Identity = 163/176 (92.61%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MDDVTASSGSLINGPPSRTPSSFFSSIFTNFPLISALVAFAIAQSIKFFTSWYKERRWDF 60
           MDD TASSGSLINGPPSR+PSSF S+IFTN+PLIS+L+AFAIAQSIKFFTSWYKERRWDF
Sbjct: 1   MDDATASSGSLINGPPSRSPSSFSSTIFTNYPLISSLLAFAIAQSIKFFTSWYKERRWDF 60

Query: 61  KKLVGSGGMPSSHSSTVSALAVAIGLQEGFGESIFAVALILACVVMYDATGVRLQAGRQA 120
           KKLVGSGGMPSSHSS VSALA+AIGLQEGFG S+FAVALILACVVMYDATGVRLQAGRQA
Sbjct: 61  KKLVGSGGMPSSHSSAVSALAIAIGLQEGFGASVFAVALILACVVMYDATGVRLQAGRQA 120

Query: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMIILTRS 177
           EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGI+TSSIG LMIILTRS
Sbjct: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIITSSIGQLMIILTRS 176

[Close]

BLAST of Lag0039876 vs. NCBI nr
Match: XP_022998709.1 (uncharacterized protein LOC111493291 isoform X1 [Cucurbita maxima])

HSP 1 Score: 307.4 bits (786), Expect = 8.1e-80
Identity = 157/175 (89.71%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MDDVTASSGSLINGPPSRTPSSFFSSIFTNFPLISALVAFAIAQSIKFFTSWYKERRWDF 60
           M  VTASSGS INGPPSR PSSF S+ FTNFPLISAL++FA+AQ IKFFTSWYKERRWDF
Sbjct: 1   MGHVTASSGSSINGPPSRAPSSFSSTAFTNFPLISALISFAVAQFIKFFTSWYKERRWDF 60

Query: 61  KKLVGSGGMPSSHSSTVSALAVAIGLQEGFGESIFAVALILACVVMYDATGVRLQAGRQA 120
           K+LVGSGGMPSSHSSTVSALAVAIGLQEGFG S+FAVALILAC+VMYDATGVRL AGRQA
Sbjct: 61  KRLVGSGGMPSSHSSTVSALAVAIGLQEGFGASVFAVALILACIVMYDATGVRLHAGRQA 120

Query: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIAGGLLGIVTSSIGHLMIILTR 176
           EVLNQIVYELPAEHPLAESRPLRELLGHTPPQV+AGGLLGIVTSSIGHLMII+TR
Sbjct: 121 EVLNQIVYELPAEHPLAESRPLRELLGHTPPQVVAGGLLGIVTSSIGHLMIIMTR 175

[Close]

BLAST of Lag0039876 vs. ExPASy Swiss-Prot
Match: O32107 (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) OX=224308 GN=yuiD PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-23
Identity = 61/150 (40.67%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 27  IFTNFPLISALVAFAIAQSIKFFTSWYKERRWDFKKLVGSGGMPSSHSSTVSALAVAIGL 86
           + TNFPL+S+L A   AQ IK    +   R+ D+  +  +GGMPSSHS+ V+AL+  + L
Sbjct: 3   LLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVAL 62

Query: 87  QEGFGESIFAVALILACVVMYDATGVRLQAGRQAEVLNQIVY----------ELPAEHPL 146
           + G   S+FAV+ I A + M+DATGVR  AG QA V+N++V           + P     
Sbjct: 63  EHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDFNRFVNEAKDFPKAAEK 122

Query: 147 AESRPLRELLGHTPPQVIAGGLLGIVTSSI 167
            + + L+ELLGH P +V  GGL GI+ + +
Sbjct: 123 EKQKKLKELLGHQPIEVFFGGLTGILLTLV 152

The following BLAST results are available for this feature:

BLAST of Lag0039876 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446081.1	8.4e-85	94.89	PREDICTED: uncharacterized membrane protein YuiD isoform X2 [Cucumis melo]	[more]
XP_004135303.1	1.1e-84	94.32	uncharacterized protein LOC101208855 isoform X2 [Cucumis sativus] >KGN51694.1 hy...	[more]
KAA0034212.1	1.2e-83	94.83	putative membrane protein YuiD isoform X2 [Cucumis melo var. makuwa] >TYK15708.1...	[more]
XP_038891333.1	1.0e-82	92.61	uncharacterized membrane protein YuiD-like isoform X1 [Benincasa hispida]	[more]
XP_022998709.1	8.1e-80	89.71	uncharacterized protein LOC111493291 isoform X1 [Cucurbita maxima]	[more]

BLAST of Lag0039876 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O32107	1.5e-23	40.67	Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) OX=22430...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003832	Protein of unknown function DUF212	PFAM	PF02681	DUF212	coord: 29..162 e-value: 4.7E-50 score: 169.0
IPR003832	Protein of unknown function DUF212	PANTHER	PTHR31446	ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN	coord: 24..170
None	No IPR available	PANTHER	PTHR31446:SF26	SUBFAMILY NOT NAMED	coord: 24..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039876.1	Lag0039876.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane