Lag0039869 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039869
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr13: 530237 .. 535904 (-)
RNA-Seq Expression	Lag0039869
Synteny	Lag0039869

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAGCGTCACCTCCACCGGAAATCCTGCCTATGTTACCGGAACAACCAGCTTCAACAGTCCTCCGCTCAATCAGCTGTTGAATCAAATCACAACCATCAAATTGGATCGAGGTAATTTTTTGCTTTGGAAAAACCTCGCGTTACCTATCCTTCGATCGTATAAATTAGAAGGGCATTTGTCTGGAGCTTCTCCGTGCCCTGAGAAATTTGTTCAAGCCGCATCTGCAAGTGTCAATCCCACGACAACTGAAGCAGGAGCAACAAGCTCAGGAGCTGTTGCAAGTGAAGCGGCTGAGTCTACTCCAGCGAGAGAATTAAATCCGCTGTATGAGTCATGGGTAGCAGTAGATCAACTGCTCCTGGGGTGGTTATACAATTCCATGACCTCTGAGGTTGCTACACAAGTCATGGGGTATGAAAATGCTCAAGAGTTATGGGCAGCGATTCAAGAGTTGTTCGGTGTTCAATCTCGGGCAGAGGAGGACTATCTTCGTCAGGTATTCCAACAATCTCGTAAGGGAAATTCTAAAATGACTGACTATTTGCGTATAATGAAAAATCACGCAGATAATCTGGGGCAAGCAGGAAGTCCGGTGAATACCAGGTCATTAATTTCTCAAGTTCTTCTTGGCCTTGATGAAGAATACAATCCGGTAGTAGCTATGATTCAAGACAGAGCTGGAATTTCATGGTCTGAGATGCAAGCTGAATTGCTTGTGTTTGAGAAGAGGTTGGAGCTGCAGAACAATCTGAAAAGTTCCTTATCCTTGAGTCCTGGAGCATCTGTAAACATGGCAAATAGCAGAGACAGTGGAAATCAAAGAAACCAAAGTTATGGTGGTCGAACCAATAATGGCTTTGGTCGAGGAAATCAAAGAGGTGCTGGAGGACGAGGTAGAGGAAGAGCTAGAGGATATGGATCATTCAGTAACAAACCAGTTTGCCAGGTATGTGGGAAGACAGGCCATACGGCATTAATGTGTTATCAAAGGTTTAACAAAGAGTTTGTAGGACCTATTTACAATCAGAACAGGGGAGAAGGAGCAAATCGACAGAATAATCAAAATGGCCAAGGGCAACCTGCTGCTTTTGTTGCAAATCAGAATGTTAATTCCTGTGTGGCAGCACCTGAGACTGTCATTGATCCAAATTGGTACGCTGACAGTGGGGCTTCAAATCACGTAACAGCAGACTACAACAACTTGGCCAACCCAGTTGAATATGAAGGTAAAGAAAGTGTAACCATTGGTGATGGAAACAAACTTAAAATTGCATTCATTGGAAACTCTTGTTTGGCTGCTGAGCATAAGAATTTTAAGCTTAAGAAAGTCTTATGTGTTCCTAGTATTGCCAAGAATCTTGTTAGTGTATCCAAACTTGCTAAAGATAATGAAGTATTTGTTGAATTTCATGATGGTTTTTGCCTTGTAAAGGACAAGGATACGGGCAAGGTGCTGCTGAAAGGAGTACTTGATGAAGGTCTGTACCGTTTTGATGGAGTCAAGGCTGTCACGACAGATACAAATGAGTTACCAATCTGCAATCTGGTTAATTCCAAGGATATAAATAATGAGCTGTCTGGGTTTGTTTTATCTAGTACGTTAAATGTTGCTATCTCAAAAGCCATATGGCACAAACGTTTAGGTCACCCATCTGAGGAAGTTCTTAAGTCTGTTGTTAAGAGTTGTAATCTTCCCTTAAGTGTTAATGAAAGTTTTAAGTTCTGTGAAGCATGCCAATATGGAAAGTCACATGCCCTGCCTTTTCCTAACTCTACCTCTCATGCATTAGACAAATTTGATCTTGTTCATACAGATCTTTGGGGGCCAGCACCATTAGATTCAGTAAATGGTTTTAAATACTACATATTGTTCATTGATGATTTCAGTAGATTCGTGTGGATATATCCATTAAAACGAAAGAATGAGGCACTTGAAGCATTTGTTCACTTTACTGCCCTTGTTAAAAATCAATTCAACAGTTCTATAAAAGCATTGCAGACTGACAATGGAGGAGAGTATGTTAAGATACATCAACTATGTAATGAAATGGGGGTTAAAATCAGATTGTCCTGCCCACATACCTCTCAGCAAAATGGAAGGGCTGAAAGAAAACATCGACACGTTGTTGAGACAGGATTAACTCTTCTAGCTCAAGCCTCAATGCCCCTAAAATTCTGGGTGGATGCATTTCTTGTTGCTGTATTATTAATAAATGGTCTTCCTTCTCAGGTTCTTGGAGGAAAATCACCCATGGAGCTGTTGTATGGCAAGAAAATTGACTTTCAAGCTTTACGAGTATTTGGATCAGCTTGTTTTCCATGTCTCAGAAAGTATCAAGCACATAAGTTCCAATATCACACTGAGAAGTGTGTTTATTTGGGACCAAGTCCGTTGCACAAAGGACACAAGTGCCTCAGTTCCAGTGGTAGATTGTTTATTTCCCGACATGTTCGATTCAATGAAGAGGAGTTCCCGTTTGCCTCTGGTTTTCAGCAAGTAGTAACAACAGCTGCCTCAAGTTCTAATGTGTCACCTTCAATTCCTCTGTGGTTCTCTAATATCTCCGGCCCAGACATTAAAACCACTCAGCAAAATCGTGAGGTTCCTTCTACTGGAGTGTCTCCAAATGAGTGCCCACCCACCACTCCCTCAAATTCATCCACGGATGTTCAACCTCTGCCAGCTGAATTATCTCCTCAATCTTCACTAATGCCAACTCATGAGGATTCTCCACCTTCTCAAGTTGAAGTTGCTGAAAATCATTGTTCAGCATCTGAGTCTTCTGCCTCTACACAGTCATCAAATCTTCCTCCAACACCGTCCACAGTGCAGGCTGGTCATCCCATGGTCACTAGAGGAAAGGCTGGGATATTCAAACCAAAGTTGTGGTTAACGCACGCCTGCACTGATTGGTCAGTCACTGAACCTACGAGAATTGCTGATGCTCTAGCTACTCCTCAATGGCGGGAGGCGATGGACATTGAGTAGATGGCCTTGATGAAAAATAGAACATGGCATCTAGTTCCCTCATCTCCGTCTATGAATATCATTGGCTGCAAGTGGATATTTAGAATCAAGAAAAACTCAGATGGCTCCATTCAACGTTATAAGGCCCGCCTCGTAGCTAAGGGATTTAATCAAAATCGGGGATCGACTTCTTTGAGACATTCAGCCCGGTTGTCAAGGCATCTACGATTCGTGTAATCCTCAGTATTGCTGTTACCAAAGGATGGCAGCTTCGTCAGTTGGACTTCAACAATGCGTTTCTCAATGGAAGGCTTGATGAGGATGTGTATATGCGTCAACCCCCGGGATATGAGGATGCAAAGTGTTCAAACTATGTATGCAAACTTGACAAGGCGATTTATGGCCTTAAACAGGCTCCAAGAGCATGGAATAATACATTGAAGGCTACTCTATTATCATGGGGCTACTCTATTATCTTTAAATACAGGGACTCCTCTTACAGATCCTCTAATATATCGTAGTGTTATTGGTGCTCTTCAATACTTGACACATACACGTCCTGACATTGCTTACATAGTAAACCAATTAAGTCAATTCCTCAAGGCTCCTACTGATGTACATTGGCAGTCAGTTAAAAGATTCTCCGATATATCAGTGGCACTCGTAACTTTGGGTTATTTATCCAGCCTAGTGATAATTTGGATATTATTGCATACTCTGACGCTGATTGGGCTTCTAGCATTGACGATAGAAAATCTGTGGCAGCATACTGTGCGTTTGTTGGCAATAATATTGTTTCGTGGGCCTCCAAAAGCAAAGTGCAGTAGCTAGATCCAGTACTGAGTCTGAATACAGGGCGTTGGCATTAGCATCTACTGAAGTTATTTGGTTAAGACAGTTGATGACTGAAATTGGCTTCCCATGTTGTTCAAAATCTGTTCTGTGGTGCGACAATGTGAGTGCTGGTGCCTTGGCTGCGAACCCGGTGTTTCATGCCCGGACCAAACACATCGAAATAGATGTTCACTTTGTTCGTGATCAGGTTCTTCAAGGGAAACTTGAAGTTAGATATATTCCCTCAAATGAGCAGCCAGCTGATTGTCTTACCAAGACACTGTCGCATTCCCAGTTTGCTTATCTACGTTGCAAACTTGGAGTAGCTGAGCTACCCTCAAGTTTGAGGGAGGATATCAAGGATAAAAGGCCTAAAGGCCCAGACAAGCAAGAAAGCAAGTTGGATCAACCAAAGCCCATCAACAGTAGGGTAATGTCATCAACATTCCAGAAGGATCCACCAACGATTTCTGTCTGCTCTTAATATTCTTCTGTTATATGTTATTCAATGAGATTGCTCCATCTGTCCCTATATTATTCTTTACAATCTTTATTTGTTAATTGTTGAGGTAAATCCTCTGATGTATAAGAAGGGATTCTCCTTCCATTATTTGGTGAATGAAAACGAGTATTATCTCAGAGATTGTCTTTCAGCTTATATTCAAATTTTAAGTCTCCCATGTTTGTATCTTCTCGTCAGCGCCCACATCTACCTCTTCATACCCACGGCCTAAATCCTAATGTCCCCCCCTTTTCAACCCAAATCCCTCAGCATCCAAATACTTCGACCTTCCCTTTTCCACAAAATGCCTCAACTACTACTCCTGTTGGTTTTCCTTACCCTCCGACTGCTCAATCGTCACTCCCCTTTTTCCCAAATAACCCTGGTGCTCTTCCACTCTTCCCCCCCACCGCAACTTCTCCTTACCCTACCTTAACTCCTCCCCTCAACATCAAACTTTCAGACTCAAATTACATGCTATGGAAGAACCAGCTACTGAATCACATAATTGCTTTTGATATGGAAAGTTTCATTGATGGCACTCCTCCTCCGGTAAAGTACTTGGATCCGACACAAACTCAGGTGAATCCACATTTTCTCATCTGGCAGAAATTTAATAGAACTTTGATGAGCTGGATATATTCTTCACTGACTGAGGATAAAATTGGCGAGATTATTGGTTGCTCCTCTGCTTTTGAAATTTGGGAACAGTTGCGTATCGTGTATGAATCTTCATCTACTGCTAGAATCATGACTCTTAGGTCCTAGTTGCAAAAGATTCGTAAGGATAGTCTTCCAGTCTCCCAATATTTAGCTCAGATTAAGGATATATCAGATAAGTTCTCTGCTATAGATGAGCCCCTGTCTTATCGTGATCATCTGGCTTATATACTTGAAGGTTTTGGTCCAGAATATAATCCCTTCGTCACTTCTATACAAAATCGAACCGACAGGCCATCTCTTGTTGATGTTAGGAGCTTACTGCTTGCTTATGATGCTAAGTTAGAGAAACAGTCATCGGTTGATACTCTGAATGCTATTCAAGCCAATATTGCCAATCTTTCAAGCTCTAACACCTATAAACGCTCTTCTCGACCTCCCAATACCCAGTGTTCCAACTCTGCCTCGGTCCCCTGCCCCTTGTTCATTCCCTTCCTCATTTCCAACGCCGCCCACAATTCACTCCCAATTCTTTTCAACAAGCTCGACCTCCACGCTGGAATTCCCCTTCCTCTCAATCTCGACCACAATGTCAAATTTGTGGTAAGATGGGTCATATTGCTCAAATTTGTCTCAATCCAACCGTCATTGGTTGGCCTAATGGAAAAAAAGATTAGGGAAGGAACTCGAGAACTTTAG

mRNA sequence

ATGACTAGCGTCACCTCCACCGGAAATCCTGCCTATGTTACCGGAACAACCAGCTTCAACAGTCCTCCGCTCAATCAGCTGTTGAATCAAATCACAACCATCAAATTGGATCGAGGTAATTTTTTGCTTTGGAAAAACCTCGCGTTACCTATCCTTCGATCGTATAAATTAGAAGGGCATTTGTCTGGAGCTTCTCCGTGCCCTGAGAAATTTGTTCAAGCCGCATCTGCAAGTGTCAATCCCACGACAACTGAAGCAGGAGCAACAAGCTCAGGAGCTGTTGCAAGTGAAGCGGCTGAGTCTACTCCAGCGAGAGAATTAAATCCGCTGTATGAGTCATGGGTAGCAGTAGATCAACTGCTCCTGGGGTGGTTATACAATTCCATGACCTCTGAGGTTGCTACACAAGTCATGGGGTATGAAAATGCTCAAGAGTTATGGGCAGCGATTCAAGAGTTGTTCGGTGTTCAATCTCGGGCAGAGGAGGACTATCTTCGTCAGGTATTCCAACAATCTCGTAAGGGAAATTCTAAAATGACTGACTATTTGCGTATAATGAAAAATCACGCAGATAATCTGGGGCAAGCAGGAAGTCCGGTGAATACCAGGTCATTAATTTCTCAAGTTCTTCTTGGCCTTGATGAAGAATACAATCCGGTAGTAGCTATGATTCAAGACAGAGCTGGAATTTCATGGTCTGAGATGCAAGCTGAATTGCTTGTGTTTGAGAAGAGGTTGGAGCTGCAGAACAATCTGAAAAGTTCCTTATCCTTGAGTCCTGGAGCATCTGTAAACATGGCAAATAGCAGAGACAGTGGAAATCAAAGAAACCAAAGTTATGGTGGTCGAACCAATAATGGCTTTGGTCGAGGAAATCAAAGAGGTGCTGGAGGACGAGGTAGAGGAAGAGCTAGAGGATATGGATCATTCAGTAACAAACCAGTTTGCCAGGTATGTGGGAAGACAGGCCATACGGCATTAATGTGTTATCAAAGGTTTAACAAAGAGTTTGTAGGACCTATTTACAATCAGAACAGGGGAGAAGGAGCAAATCGACAGAATAATCAAAATGGCCAAGGGCAACCTGCTGCTTTTGTTGCAAATCAGAATGTTAATTCCTGTGTGGCAGCACCTGAGACTGTCATTGATCCAAATTGGTACGCTGACAGTGGGGCTTCAAATCACGTAACAGCAGACTACAACAACTTGGCCAACCCAGTTGAATATGAAGGTAAAGAAAGTGTAACCATTGGTGATGGAAACAAACTTAAAATTGCATTCATTGGAAACTCTTGTTTGGCTGCTGAGCATAAGAATTTTAAGCTTAAGAAAGTCTTATGTGTTCCTAGTATTGCCAAGAATCTTGTTAGTGTATCCAAACTTGCTAAAGATAATGAAGTATTTGTTGAATTTCATGATGGTTTTTGCCTTGTAAAGGACAAGGATACGGGCAAGGTGCTGCTGAAAGGAGTACTTGATGAAGGTCTGTACCGTTTTGATGGAGTCAAGGCTGTCACGACAGATACAAATGAGTTACCAATCTGCAATCTGGTTAATTCCAAGGATATAAATAATGAGCTGTCTGGGTTTGTTTTATCTAGTACGTTAAATGTTGCTATCTCAAAAGCCATATGGCACAAACGTTTAGGTCACCCATCTGAGGAAGTTCTTAAGTCTGTTGTTAAGAGTTGTAATCTTCCCTTAAGTGTTAATGAAAGTTTTAAGTTCTGTGAAGCATGCCAATATGGAAAGTCACATGCCCTGCCTTTTCCTAACTCTACCTCTCATGCATTAGACAAATTTGATCTTGTTCATACAGATCTTTGGGGGCCAGCACCATTAGATTCAGTAAATGGTTTTAAATACTACATATTGTTCATTGATGATTTCAGTAGATTCGTGTGGATATATCCATTAAAACGAAAGAATGAGGCACTTGAAGCATTTGTTCACTTTACTGCCCTTGTTAAAAATCAATTCAACAGTTCTATAAAAGCATTGCAGACTGACAATGGAGGAGAGTATGTTAAGATACATCAACTATGTAATGAAATGGGGGTTAAAATCAGATTGTCCTGCCCACATACCTCTCAGCAAAATGGAAGGGCTGAAAGAAAACATCGACACGTTGTTGAGACAGGATTAACTCTTCTAGCTCAAGCCTCAATGCCCCTAAAATTCTGGGTGGATGCATTTCTTGTTGCTGTATTATTAATAAATGGTCTTCCTTCTCAGGTTCTTGGAGGAAAATCACCCATGGAGCTGTTGTATGGCAAGAAAATTGACTTTCAAGCTTTACGAGTATTTGGATCAGCTTGTTTTCCATGTCTCAGAAAGTATCAAGCACATAAGTTCCAATATCACACTGAGAAGTGTGTTTATTTGGGACCAAGTCCGTTGCACAAAGGACACAAGTGCCTCAGTTCCAGTGGTAGATTGTTTATTTCCCGACATGTTCGATTCAATGAAGAGGAGTTCCCGTTTGCCTCTGGTTTTCAGCAAGTAGTAACAACAGCTGCCTCAAGTTCTAATGTGTCACCTTCAATTCCTCTGTGGTTCTCTAATATCTCCGGCCCAGACATTAAAACCACTCAGCAAAATCGTGAGGTTCCTTCTACTGGAGTGTCTCCAAATGAGTGCCCACCCACCACTCCCTCAAATTCATCCACGGATGTTCAACCTCTGCCAGCTGAATTATCTCCTCAATCTTCACTAATGCCAACTCATGAGGATTCTCCACCTTCTCAAGTTGAAGTTGCTGAAAATCATTGTTCAGCATCTGAGTCTTCTGCCTCTACACAGTCATCAAATCTTCCTCCAACACCGTCCACAGTGCAGGCTGGTCATCCCATGGTCACTAGAGGAAAGGCTGGGATATTCAAACCAAAGTTGTGGTTAACGCACGCCTGCACTGATTGGTCAGTCACTGAACCTACGAGAATTGCTGATGCTCTAGCTACTCCTCAATGGCGGGAGGCGATGGACATTGACCCGGTTGTCAAGGCATCTACGATTCGTGTAATCCTCAGTATTGCTGTTACCAAAGGATGGCAGCTTCGTCAGTTGGACTTCAACAATGCGTTTCTCAATGGAAGGCTTGATGAGGATGTGTATATGCGTCAACCCCCGGGATATGAGGATGCAAAGTGTTCAAACTATGTATGCAAACTTGACAAGGCGATTTATGGCCTTAAACAGGCTCCAAGAGCATGGAATAATACATTGAAGGCTACTCTATTATCATGGGGCTACTCTATTATCTTTAAATACAGGGACTCCTCTTACAGATCCTCTAATATATCGGCGTTGGCATTAGCATCTACTGAAGTTATTTGGTTAAGACAGTTGATGACTGAAATTGGCTTCCCATGTTGTTCAAAATCTGTTCTGTGGTGCGACAATGTGAGTGCTGGTGCCTTGGCTGCGAACCCGGTGTTTCATGCCCGGACCAAACACATCGAAATAGATGTTCACTTTGTTCGTGATCAGGTTCTTCAAGGGAAACTTGAAGTTAGATATATTCCCTCAAATGAGCAGCCAGCTGATTGTCTTACCAAGACACTGTCGCATTCCCAGTTTGCTTATCTACGTTGCAAACTTGGAGTAGCTGAGCTACCCTCAAGTTTGAGGGAGGATATCAAGGATAAAAGGCCTAAAGGCCCAGACAAGCAAGAAAGCAAGTTGGATCAACCAAAGCCCATCAACAGTAGGCGCCCACATCTACCTCTTCATACCCACGGCCTAAATCCTAATGTCCCCCCCTTTTCAACCCAAATCCCTCAGCATCCAAATACTTCGACCTTCCCTTTTCCACAAAATGCCTCAACTACTACTCCTGTTGGTTTTCCTTACCCTCCGACTGCTCAATCGTCACTCCCCTTTTTCCCAAATAACCCTGGTGCTCTTCCACTCTTCCCCCCCACCGCAACTTCTCCTTACCCTACCTTAACTCCTCCCCTCAACATCAAACTTTCAGACTCAAATTACATGCTATGGAAGAACCAGCTACTGAATCACATAATTGCTTTTGATATGGAAAGTTTCATTGATGGCACTCCTCCTCCGGTAAAGTACTTGGATCCGACACAAACTCAGTTGCAAAAGATTCGTAAGGATAGTCTTCCAGTCTCCCAATATTTAGCTCAGATTAAGGATATATCAGATAAGTTCTCTGCTATAGATGAGCCCCTGTCTTATCGTGATCATCTGGCTTATATACTTGAAGGTTTTGGTCCAGAATATAATCCCTTCGTCACTTCTATACAAAATCGAACCGACAGGCCATCTCTTGTTGATGTTAGGAGCTTACTGCTTGCTTATGATGCTAAGTTAGAGAAACAGTCATCGGTTGATACTCTGAATGCTATTCAAGCCAATATTGCCAATCTTTCAAGCTCTAACACCTATAAACGCTCTTCTCGACCTCCCAATACCCAGTGTTCCAACTCTGCCTCGGTCCCCTGCCCCTTGTTCATTCCCTTCCTCATTTCCAACGCCGCCCACAATTCACTCCCAATTCTTTTCAACAAGCTCGACCTCCACGCTGGAATTCCCCTTCCTCTCAATCTCGACCACAATGTCAAATTTGTGGTAAGATGGGTCATATTGCTCAAATTTGTCTCAATCCAACCGTCATTGGTTGGCCTAATGGAAAAAAAGATTAGGGAAGGAACTCGAGAACTTTAG

Coding sequence (CDS)

ATGACTAGCGTCACCTCCACCGGAAATCCTGCCTATGTTACCGGAACAACCAGCTTCAACAGTCCTCCGCTCAATCAGCTGTTGAATCAAATCACAACCATCAAATTGGATCGAGGTAATTTTTTGCTTTGGAAAAACCTCGCGTTACCTATCCTTCGATCGTATAAATTAGAAGGGCATTTGTCTGGAGCTTCTCCGTGCCCTGAGAAATTTGTTCAAGCCGCATCTGCAAGTGTCAATCCCACGACAACTGAAGCAGGAGCAACAAGCTCAGGAGCTGTTGCAAGTGAAGCGGCTGAGTCTACTCCAGCGAGAGAATTAAATCCGCTGTATGAGTCATGGGTAGCAGTAGATCAACTGCTCCTGGGGTGGTTATACAATTCCATGACCTCTGAGGTTGCTACACAAGTCATGGGGTATGAAAATGCTCAAGAGTTATGGGCAGCGATTCAAGAGTTGTTCGGTGTTCAATCTCGGGCAGAGGAGGACTATCTTCGTCAGGTATTCCAACAATCTCGTAAGGGAAATTCTAAAATGACTGACTATTTGCGTATAATGAAAAATCACGCAGATAATCTGGGGCAAGCAGGAAGTCCGGTGAATACCAGGTCATTAATTTCTCAAGTTCTTCTTGGCCTTGATGAAGAATACAATCCGGTAGTAGCTATGATTCAAGACAGAGCTGGAATTTCATGGTCTGAGATGCAAGCTGAATTGCTTGTGTTTGAGAAGAGGTTGGAGCTGCAGAACAATCTGAAAAGTTCCTTATCCTTGAGTCCTGGAGCATCTGTAAACATGGCAAATAGCAGAGACAGTGGAAATCAAAGAAACCAAAGTTATGGTGGTCGAACCAATAATGGCTTTGGTCGAGGAAATCAAAGAGGTGCTGGAGGACGAGGTAGAGGAAGAGCTAGAGGATATGGATCATTCAGTAACAAACCAGTTTGCCAGGTATGTGGGAAGACAGGCCATACGGCATTAATGTGTTATCAAAGGTTTAACAAAGAGTTTGTAGGACCTATTTACAATCAGAACAGGGGAGAAGGAGCAAATCGACAGAATAATCAAAATGGCCAAGGGCAACCTGCTGCTTTTGTTGCAAATCAGAATGTTAATTCCTGTGTGGCAGCACCTGAGACTGTCATTGATCCAAATTGGTACGCTGACAGTGGGGCTTCAAATCACGTAACAGCAGACTACAACAACTTGGCCAACCCAGTTGAATATGAAGGTAAAGAAAGTGTAACCATTGGTGATGGAAACAAACTTAAAATTGCATTCATTGGAAACTCTTGTTTGGCTGCTGAGCATAAGAATTTTAAGCTTAAGAAAGTCTTATGTGTTCCTAGTATTGCCAAGAATCTTGTTAGTGTATCCAAACTTGCTAAAGATAATGAAGTATTTGTTGAATTTCATGATGGTTTTTGCCTTGTAAAGGACAAGGATACGGGCAAGGTGCTGCTGAAAGGAGTACTTGATGAAGGTCTGTACCGTTTTGATGGAGTCAAGGCTGTCACGACAGATACAAATGAGTTACCAATCTGCAATCTGGTTAATTCCAAGGATATAAATAATGAGCTGTCTGGGTTTGTTTTATCTAGTACGTTAAATGTTGCTATCTCAAAAGCCATATGGCACAAACGTTTAGGTCACCCATCTGAGGAAGTTCTTAAGTCTGTTGTTAAGAGTTGTAATCTTCCCTTAAGTGTTAATGAAAGTTTTAAGTTCTGTGAAGCATGCCAATATGGAAAGTCACATGCCCTGCCTTTTCCTAACTCTACCTCTCATGCATTAGACAAATTTGATCTTGTTCATACAGATCTTTGGGGGCCAGCACCATTAGATTCAGTAAATGGTTTTAAATACTACATATTGTTCATTGATGATTTCAGTAGATTCGTGTGGATATATCCATTAAAACGAAAGAATGAGGCACTTGAAGCATTTGTTCACTTTACTGCCCTTGTTAAAAATCAATTCAACAGTTCTATAAAAGCATTGCAGACTGACAATGGAGGAGAGTATGTTAAGATACATCAACTATGTAATGAAATGGGGGTTAAAATCAGATTGTCCTGCCCACATACCTCTCAGCAAAATGGAAGGGCTGAAAGAAAACATCGACACGTTGTTGAGACAGGATTAACTCTTCTAGCTCAAGCCTCAATGCCCCTAAAATTCTGGGTGGATGCATTTCTTGTTGCTGTATTATTAATAAATGGTCTTCCTTCTCAGGTTCTTGGAGGAAAATCACCCATGGAGCTGTTGTATGGCAAGAAAATTGACTTTCAAGCTTTACGAGTATTTGGATCAGCTTGTTTTCCATGTCTCAGAAAGTATCAAGCACATAAGTTCCAATATCACACTGAGAAGTGTGTTTATTTGGGACCAAGTCCGTTGCACAAAGGACACAAGTGCCTCAGTTCCAGTGGTAGATTGTTTATTTCCCGACATGTTCGATTCAATGAAGAGGAGTTCCCGTTTGCCTCTGGTTTTCAGCAAGTAGTAACAACAGCTGCCTCAAGTTCTAATGTGTCACCTTCAATTCCTCTGTGGTTCTCTAATATCTCCGGCCCAGACATTAAAACCACTCAGCAAAATCGTGAGGTTCCTTCTACTGGAGTGTCTCCAAATGAGTGCCCACCCACCACTCCCTCAAATTCATCCACGGATGTTCAACCTCTGCCAGCTGAATTATCTCCTCAATCTTCACTAATGCCAACTCATGAGGATTCTCCACCTTCTCAAGTTGAAGTTGCTGAAAATCATTGTTCAGCATCTGAGTCTTCTGCCTCTACACAGTCATCAAATCTTCCTCCAACACCGTCCACAGTGCAGGCTGGTCATCCCATGGTCACTAGAGGAAAGGCTGGGATATTCAAACCAAAGTTGTGGTTAACGCACGCCTGCACTGATTGGTCAGTCACTGAACCTACGAGAATTGCTGATGCTCTAGCTACTCCTCAATGGCGGGAGGCGATGGACATTGACCCGGTTGTCAAGGCATCTACGATTCGTGTAATCCTCAGTATTGCTGTTACCAAAGGATGGCAGCTTCGTCAGTTGGACTTCAACAATGCGTTTCTCAATGGAAGGCTTGATGAGGATGTGTATATGCGTCAACCCCCGGGATATGAGGATGCAAAGTGTTCAAACTATGTATGCAAACTTGACAAGGCGATTTATGGCCTTAAACAGGCTCCAAGAGCATGGAATAATACATTGAAGGCTACTCTATTATCATGGGGCTACTCTATTATCTTTAAATACAGGGACTCCTCTTACAGATCCTCTAATATATCGGCGTTGGCATTAGCATCTACTGAAGTTATTTGGTTAAGACAGTTGATGACTGAAATTGGCTTCCCATGTTGTTCAAAATCTGTTCTGTGGTGCGACAATGTGAGTGCTGGTGCCTTGGCTGCGAACCCGGTGTTTCATGCCCGGACCAAACACATCGAAATAGATGTTCACTTTGTTCGTGATCAGGTTCTTCAAGGGAAACTTGAAGTTAGATATATTCCCTCAAATGAGCAGCCAGCTGATTGTCTTACCAAGACACTGTCGCATTCCCAGTTTGCTTATCTACGTTGCAAACTTGGAGTAGCTGAGCTACCCTCAAGTTTGAGGGAGGATATCAAGGATAAAAGGCCTAAAGGCCCAGACAAGCAAGAAAGCAAGTTGGATCAACCAAAGCCCATCAACAGTAGGCGCCCACATCTACCTCTTCATACCCACGGCCTAAATCCTAATGTCCCCCCCTTTTCAACCCAAATCCCTCAGCATCCAAATACTTCGACCTTCCCTTTTCCACAAAATGCCTCAACTACTACTCCTGTTGGTTTTCCTTACCCTCCGACTGCTCAATCGTCACTCCCCTTTTTCCCAAATAACCCTGGTGCTCTTCCACTCTTCCCCCCCACCGCAACTTCTCCTTACCCTACCTTAACTCCTCCCCTCAACATCAAACTTTCAGACTCAAATTACATGCTATGGAAGAACCAGCTACTGAATCACATAATTGCTTTTGATATGGAAAGTTTCATTGATGGCACTCCTCCTCCGGTAAAGTACTTGGATCCGACACAAACTCAGTTGCAAAAGATTCGTAAGGATAGTCTTCCAGTCTCCCAATATTTAGCTCAGATTAAGGATATATCAGATAAGTTCTCTGCTATAGATGAGCCCCTGTCTTATCGTGATCATCTGGCTTATATACTTGAAGGTTTTGGTCCAGAATATAATCCCTTCGTCACTTCTATACAAAATCGAACCGACAGGCCATCTCTTGTTGATGTTAGGAGCTTACTGCTTGCTTATGATGCTAAGTTAGAGAAACAGTCATCGGTTGATACTCTGAATGCTATTCAAGCCAATATTGCCAATCTTTCAAGCTCTAACACCTATAAACGCTCTTCTCGACCTCCCAATACCCAGTGTTCCAACTCTGCCTCGGTCCCCTGCCCCTTGTTCATTCCCTTCCTCATTTCCAACGCCGCCCACAATTCACTCCCAATTCTTTTCAACAAGCTCGACCTCCACGCTGGAATTCCCCTTCCTCTCAATCTCGACCACAATGTCAAATTTGTGGTAAGATGGGTCATATTGCTCAAATTTGTCTCAATCCAACCGTCATTGGTTGGCCTAATGGAAAAAAAGATTAGGGAAGGAACTCGAGAACTTTAG

Protein sequence

MTSVTSTGNPAYVTGTTSFNSPPLNQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASVNPTTTEAGATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYENAQELWAAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLISQVLLGLDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSSLSLSPGASVNMANSRDSGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGYGSFSNKPVCQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSCVAAPETVIDPNWYADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLAAEHKNFKLKKVLCVPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTTDTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSEEVLKSVVKSCNLPLSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFIDDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGEYVKIHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVLGGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCLSSSGRLFISRHVRFNEEEFPFASGFQQVVTTAASSSNVSPSIPLWFSNISGPDIKTTQQNREVPSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHEDSPPSQVEVAENHCSASESSASTQSSNLPPTPSTVQAGHPMVTRGKAGIFKPKLWLTHACTDWSVTEPTRIADALATPQWREAMDIDPVVKASTIRVILSIAVTKGWQLRQLDFNNAFLNGRLDEDVYMRQPPGYEDAKCSNYVCKLDKAIYGLKQAPRAWNNTLKATLLSWGYSIIFKYRDSSYRSSNISALALASTEVIWLRQLMTEIGFPCCSKSVLWCDNVSAGALAANPVFHARTKHIEIDVHFVRDQVLQGKLEVRYIPSNEQPADCLTKTLSHSQFAYLRCKLGVAELPSSLREDIKDKRPKGPDKQESKLDQPKPINSRRPHLPLHTHGLNPNVPPFSTQIPQHPNTSTFPFPQNASTTTPVGFPYPPTAQSSLPFFPNNPGALPLFPPTATSPYPTLTPPLNIKLSDSNYMLWKNQLLNHIIAFDMESFIDGTPPPVKYLDPTQTQLQKIRKDSLPVSQYLAQIKDISDKFSAIDEPLSYRDHLAYILEGFGPEYNPFVTSIQNRTDRPSLVDVRSLLLAYDAKLEKQSSVDTLNAIQANIANLSSSNTYKRSSRPPNTQCSNSASVPCPLFIPFLISNAAHNSLPILFNKLDLHAGIPLPLNLDHNVKFVVRWVILLKFVSIQPSLVGLMEKKIREGTREL

Homology

[Close]

BLAST of Lag0039869 vs. NCBI nr
Match: GAU19483.1 (hypothetical protein TSUD_77270 [Trifolium subterraneum])

HSP 1 Score: 847.4 bits (2188), Expect = 1.9e-241
Identity = 536/1457 (36.79%), Postives = 714/1457 (49.00%), Query Frame = 0


Query: 33   TIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASVNPTTTEAGATSSG 92
            ++KLDR N+ LWK+L LP++R  KL+G++ G   CPE+F+ ++ +S N            
Sbjct: 18   SVKLDRNNYPLWKSLVLPVIRGCKLDGYMLGTEGCPEEFITSSDSSKNK----------- 77

Query: 93   AVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYENAQELWAAIQE 152
                           N  +  W A DQ LLGW+ NSMT+E+ATQ++  E +++LW   Q 
Sbjct: 78   ---------------NSAFVEWQANDQRLLGWMLNSMTTEIATQLLHCETSKQLWDEAQS 137

Query: 153  LFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLISQVLLG 212
            L G  +R++  YL+  F   RKG  KM DYL  MKN  D L  AG+PV+T  LI Q L G
Sbjct: 138  LAGAHTRSQIIYLKSEFHSIRKGEMKMEDYLIKMKNLVDKLKLAGNPVSTSDLIIQTLNG 197

Query: 213  LDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSSLSLSPGASVNMANSRDS 272
            LD EYNPVV  + D+  +SW ++QA+LL FE R+E  NNL    +L+  A+ N+AN    
Sbjct: 198  LDSEYNPVVVKLSDQTTLSWVDLQAQLLTFESRIEQLNNL---TNLTLNATANVAN---- 257

Query: 273  GNQRNQSYGGRTNNGFGRGNQRG-AGGRGRGRARGYGSFSNKPVCQVCGKTGHTALMCYQ 332
               R+   G  +NN +   N RG  GGRGRG+       S K  CQVCG + H A+ C+ 
Sbjct: 258  ---RSDHRGKSSNNNWRGSNSRGWRGGRGRGK-------SGKNPCQVCGLSNHIAIDCFH 317

Query: 333  RFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSCVAAPETVIDPNWYADSG 392
            RF+K +       N   G ++Q + N      AF+A+QN         +V D +WY DSG
Sbjct: 318  RFDKTY----SRSNHSAGHDKQGSHN------AFLASQN---------SVEDYDWYFDSG 377

Query: 393  ASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLAAEHKNFKLKKVLCVPSI 452
            ASNHVT       +  E+ GK S+ +G+G KL I   G+S L    K+  L  +L VP+I
Sbjct: 378  ASNHVTHQTEKFQDLTEHHGKNSLVVGNGEKLAILATGSSKL----KSLNLHDILYVPNI 437

Query: 453  AKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTTDTNE 512
             KNL+SVSKLA DN + VEF +  C VKDK TGKV+LKG+L +GLY+  G K        
Sbjct: 438  TKNLLSVSKLAADNNILVEFDENCCFVKDKLTGKVILKGLLKDGLYQLSGTK-------- 497

Query: 513  LPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSEEVLKSVVKSCNLPLSVN 572
                            S FV          K  WH+RLGHP+ +VL  V++SC + +  +
Sbjct: 498  -------------RNPSAFV--------SVKESWHRRLGHPNNKVLDKVLESCKVKVPPS 557

Query: 573  ESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFIDDFS 632
            ++F FCEACQYGK H LPF +S+SHA +  +LVHTD+WGPAP+ + +GFKYY+ F+DDFS
Sbjct: 558  DNFSFCEACQYGKMHLLPFKSSSSHAQEPLELVHTDVWGPAPIMTSSGFKYYVHFVDDFS 617

Query: 633  RFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGEYVKIHQLCNEMGVKIRL 692
            RF WIYPLK+K+E ++AF+ F  L +NQFN  IK +Q D GGEY  + +L  E G++ R+
Sbjct: 618  RFTWIYPLKQKSETVQAFIQFKNLTENQFNKRIKVIQCDGGGEYKPVQKLAVEAGIQFRM 677

Query: 693  SCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVLGGKS 752
            SCP+TSQQNGRAERKHRH+ E GLTLLAQA MPL +W +AF  AV LIN LPSQV   +S
Sbjct: 678  SCPYTSQQNGRAERKHRHITEFGLTLLAQAQMPLHYWWEAFSTAVYLINRLPSQVTQNES 737

Query: 753  PMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCLSSSG 812
            P  L+  K+ D++ L+ FG AC+PCL+ Y  HK QYHT +CV+LG S  HKG+KCL+S G
Sbjct: 738  PYSLMLQKEPDYKLLKTFGCACYPCLKPYNQHKLQYHTTRCVFLGYSNSHKGYKCLNSHG 797

Query: 813  RLFISRHVRFNEEEFPFASGFQQVVTTAASSSNV-SPSIPLWFSNISGPDIKTTQQNREV 872
            R+FISRHV FNE+ FPF  GF    +   ++ NV S S PL           T     + 
Sbjct: 798  RIFISRHVIFNEDHFPFHDGFLNTRSPLKTTINVPSTSFPLC----------TAGNVIDD 857

Query: 873  PSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHEDSPPSQVEVAENHCSASESS 932
             S  +   E P  T +  S DV                + D+  +    +E++ +  E+ 
Sbjct: 858  ASMPILEAENPAETNTEDSQDV----------------NSDTEQTNNGPSEDNTTHEETL 917

Query: 933  ASTQSSNLPPTPSTVQAGHPMVTRGKAGIFKPKL---WLTHACTDWSVTEPTRIADALAT 992
              TQ  ++          H + TR K+GI KPKL    LT    D    EP    +AL+ 
Sbjct: 918  DITQQQSVGEASQNTNTSHAIHTRSKSGIHKPKLPYIGLTETYKD--TMEPANAKEALSR 977

Query: 993  PQWREAMD---------------------------------------------------- 1052
            P W+EAM                                                     
Sbjct: 978  PLWKEAMQKEFEALMSNKTWILVPYQNQENIVDSKWVFKTKYKPDGSLERRKARLVAKGF 1037

Query: 1053 -----------IDPVVKASTIRVILSIAVTKGWQLRQLDFNNAFLNGRLDEDVYMRQPPG 1112
                         PV+KAST+R+ILSIAV   W++RQLD NNAFLNG L E V+M QP G
Sbjct: 1038 QQTAGIDYEETFSPVIKASTVRIILSIAVHLNWEVRQLDINNAFLNGHLKETVFMHQPEG 1097

Query: 1113 YEDAKCSNYVCKLDKAIYGLKQAPRAWNNTLKATLLSWGYS--------IIFKYRD---- 1172
            + D+   N++CKL KAIYGLKQAPRAW ++LK  LL+WG+          + K +D    
Sbjct: 1098 FVDSTKPNHICKLSKAIYGLKQAPRAWFDSLKTALLNWGFQNTKSDSSLFLLKGKDHITF 1157

Query: 1173 ------------------------------------------------------------ 1207
                                                                        
Sbjct: 1158 LLIYVDDIIVTGSNGKFLQAFIKQLNDAFSLKDLGHLHYFLGIEVQRDASGMYLKQSKYI 1217

[Close]

BLAST of Lag0039869 vs. NCBI nr
Match: GAU51268.1 (hypothetical protein TSUD_412550 [Trifolium subterraneum])

HSP 1 Score: 789.6 bits (2038), Expect = 4.8e-224
Identity = 524/1496 (35.03%), Postives = 717/1496 (47.93%), Query Frame = 0


Query: 16   TTSFNSPPLNQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAA 75
            +++ NSP  N  L  I ++KLDR N+ LWK+L L ++R  KL+G++ G + CPE+FV +A
Sbjct: 2    SSAANSPKKND-LPSIISVKLDRDNYPLWKSLVLSLIRGCKLDGYILGTTECPEQFVTSA 61

Query: 76   SASVNPTTTEAGATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVAT 135
              S                          +++NP +  W+A DQ LLGWL NSM  ++AT
Sbjct: 62   DKS--------------------------KKVNPDFGDWIANDQALLGWLMNSMAIDIAT 121

Query: 136  QVMGYENAQELWAAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQ 195
            Q++  E +++LW   Q L G  +++   YL+  F  +RKG  KM +YL  MKN +D L  
Sbjct: 122  QLLHCETSKQLWDETQSLAGAHTKSRITYLKSEFHNTRKGEMKMEEYLIKMKNLSDKLKL 181

Query: 196  AGSPVNTRSLISQVLLGLDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSS 255
            AGSP++   L+ Q L GLD EYNPVV  + D+  +SW ++QA+LL FE RL+  NN  S 
Sbjct: 182  AGSPISNSDLMIQTLNGLDAEYNPVVVKLSDQINLSWVDVQAQLLAFESRLDQFNNF-SG 241

Query: 256  LSLSPGASVNMANSRD-SGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGYGSFSNKP 315
            L+L+  AS N AN  +  GN+ N            RGN R +  RG    RG G  SN  
Sbjct: 242  LTLN--ASANFANKTEFRGNKFN-----------SRGNWRRSNFRGMRGGRGKGRMSNTK 301

Query: 316  VCQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSC 375
             CQVC  TGH A+ C  RF++ +           G N     + QG  +AF         
Sbjct: 302  -CQVCNGTGHIAVDCSYRFDRPYT----------GRNYSTEADKQGSHSAF--------- 361

Query: 376  VAAPETVIDPNWYADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLA 435
            +A+P    D  WY DSGA+NHVT   +      E+ GK S+ +G+G KLKI   G++ L 
Sbjct: 362  IASPYHGQDYEWYFDSGANNHVTHQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKL- 421

Query: 436  AEHKNFKLKKVLCVPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDE 495
                N  L  VL VP I KNL+SVSKL  DN + VEF    C VKDK TG+ LLKG L +
Sbjct: 422  ---NNLNLHDVLYVPQITKNLLSVSKLTADNNILVEFDANCCSVKDKLTGQTLLKGRLKD 481

Query: 496  GLYRFDGVKAVTTDTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSE 555
            GLY+          +N+ P C  ++ K+                      WH++LGHP+ 
Sbjct: 482  GLYQL---------SNKEP-CVYMSVKE---------------------SWHRKLGHPNN 541

Query: 556  EVLKSVVKSCNLPLSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAPL 615
            +VL  V+K CN+ +S ++ F FCEACQ+GK H LPF  S+SH  +   L+H+D+WGPAP+
Sbjct: 542  KVLDKVLKDCNVKISHSDQFSFCEACQFGKLHLLPFKPSSSHVQEPLALIHSDVWGPAPI 601

Query: 616  DSVNGFKYYILFIDDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGE 675
             S +GFKYY+ FIDDFSRF WI+PLK+K++ + AF+ F  L +NQFN  IK +Q D GGE
Sbjct: 602  LSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKKIKIIQCDGGGE 661

Query: 676  YVKIHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLV 735
            Y  + ++  E G++ R+SCP+TSQQNGRAERKHRHV E GLTLLAQA MPL++W +AF  
Sbjct: 662  YKAVQKVSIEAGIQFRMSCPYTSQQNGRAERKHRHVAELGLTLLAQAKMPLRYWWEAFST 721

Query: 736  AVLLINGLPSQVLGGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVY 795
            AV LIN LPS V   +SP  L++ ++ D+ AL+ FG AC+PCL+ Y  HK Q+HT +CV+
Sbjct: 722  AVYLINRLPSSVNPNESPYSLMFKREPDYNALKPFGCACYPCLKPYNQHKLQFHTTRCVF 781

Query: 796  LGPSPLHKGHKCLSSSGRLFISRHVRFNEEEFPFASGF----QQVVTTAASSSNVSPSIP 855
            +G S  HKG+KC++S GR+F+SRHV FNE  FPF  GF      + T   +SS + P+  
Sbjct: 782  VGYSNSHKGYKCINSHGRIFVSRHVIFNENHFPFHGGFLDTKNPLKTLTDNSSILLPTC- 841

Query: 856  LWFSNISGPDIKTTQQNREVPSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHE 915
                         T Q+   P    + ++    T S  S+D      ++      + T+ 
Sbjct: 842  ---------SAGATTQDAIEPDNNTTSDQ---NTHSIESSDNNENEEQVDSSEFFVNTNN 901

Query: 916  DSPPSQVEVAENHCSASESSASTQSSNLPPTPSTVQAG-HPMVTRGKAGIFKPKL-WLTH 975
             S  +Q   A+N   + + + ST +  +        +  H M TR K GI KPK+ ++  
Sbjct: 902  SS--TQDIEADNSVDSEDRNNSTMTGTIQQQAQQDNSNTHWMRTRSKDGIHKPKIPYVGM 961

Query: 976  ACTDWSVTEPTRIADALATPQWREAMD--------------------------------- 1035
            A TD    EP  + +AL  P W+EAMD                                 
Sbjct: 962  AETDSEEKEPKSVKEALGRPMWKEAMDKEYKALVSNHTWTLVPYQEQENIIDSKWIFKTK 1021

Query: 1036 ------------------------------IDPVVKASTIRVILSIAVTKGWQLRQLDFN 1095
                                            PVVK+ST+R+IL+IAV   W++RQLD N
Sbjct: 1022 YKSDGSIERRKARLVAKGFQQTAGLDFGETFSPVVKSSTVRIILTIAVHFNWEVRQLDIN 1081

Query: 1096 NAFLNGRLDEDVYMRQPPGYEDAKCSNYVCKLDKAIYGLKQAPRAWNNTLKATLLSWGY- 1155
            NAFLNG+L E V+M QP GY DA   N++CKL KAIYGLKQAPRAW ++L++TL++WG+ 
Sbjct: 1082 NAFLNGKLKETVFMHQPEGYIDAAKPNHICKLSKAIYGLKQAPRAWYDSLRSTLVNWGFQ 1141

Query: 1156 ------SIIF-------------------------------------------------- 1208
                  S+ F                                                  
Sbjct: 1142 NAKNDTSLFFLKGADHTTFLLIYVDDIIVTGSNIKFLEAFTNQLNTAYSLKDLGPLHYFL 1201

[Close]

BLAST of Lag0039869 vs. NCBI nr
Match: PNX94503.1 (putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense])

HSP 1 Score: 775.8 bits (2002), Expect = 7.1e-220
Identity = 463/1123 (41.23%), Postives = 618/1123 (55.03%), Query Frame = 0


Query: 28   LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASVNPTTTEAG 87
            L    ++KLDR NF LWK+L LP++R  K +G++ G   CP++FV     S++ T     
Sbjct: 12   LPSTVSVKLDRDNFPLWKSLVLPLIRGCKYDGYMLGTKKCPDQFV----TSIDNT----- 71

Query: 88   ATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYENAQELW 147
                              ++NP Y+ W A DQ LLGWL NSMT ++ATQV+  E +++LW
Sbjct: 72   -----------------EKINPDYQDWQADDQALLGWLMNSMTVDIATQVLHCETSKQLW 131

Query: 148  AAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLIS 207
               Q L G  +R+   YL+  F  + K   KM  YL  MKN AD L  AGSP+++  L+ 
Sbjct: 132  DEAQSLAGAHTRSRIIYLKSEFHNTHKREMKMEQYLAKMKNLADKLKLAGSPISSSDLMI 191

Query: 208  QVLLGLDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSSLSLSPGASVNMA 267
            Q L GLD EYNPVV  + D+  ISW + QA+LL FE RL+  NN     +++  AS N A
Sbjct: 192  QTLNGLDSEYNPVVVKLSDQTNISWVDFQAQLLAFESRLDQLNNFN---NINLNASANFA 251

Query: 268  NSRDSGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGYGSFSNKPVCQVCGKTGHTAL 327
            +  +SG  +   +G R   G+   N RG  G GRGRAR   S   +P+CQ+CGK GHTA 
Sbjct: 252  SKNESGGNK---FGSR--GGWRGSNSRGMRG-GRGRAR--MSKPPRPICQICGKFGHTAA 311

Query: 328  MCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSCVAAPETVIDPNWY 387
             CY RF+K +              + +   G+G  +AF         VA+P    D  WY
Sbjct: 312  QCYYRFDKSY------------TEKNHYAEGEGSHSAF---------VASPYHGQDYEWY 371

Query: 388  ADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLAAEHKNFKLKKVLC 447
             DSGASNHVT     L +  E  GK S+ +G+G KLKI   G++ L     +  L+ VL 
Sbjct: 372  FDSGASNHVTHQSGQLQDLNENNGKNSLLVGNGEKLKILASGSTKL----NDVNLRNVLY 431

Query: 448  VPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTT 507
            VP I KNL+SVSKL  DN   VEF + +C VKDK TGK LLKG L +GLY+    K   T
Sbjct: 432  VPEITKNLLSVSKLTIDNNALVEFDENYCYVKDKLTGKALLKGRLKDGLYQLSANKEPPT 491

Query: 508  DTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSEEVLKSVVKSCNLP 567
            + +     +L                        K IWH++LGHP+ +VL+ V+K  N+ 
Sbjct: 492  NKDPCAYISL------------------------KEIWHRKLGHPNNKVLEKVLKDNNVK 551

Query: 568  LSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFI 627
            +S ++ F FCEACQ+GK H LPF  S+SHA +  DL+HTD+WGPAP+ S + FKYY+ F+
Sbjct: 552  ISPSDKFTFCEACQFGKLHLLPFKTSSSHAKEPLDLIHTDVWGPAPILSQSNFKYYVHFL 611

Query: 628  DDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGEYVKIHQLCNEMGV 687
            DDFSRF WI+PLK+K+E + AF  F  LV+NQFN  IK ++ D GGEY  + +   + G+
Sbjct: 612  DDFSRFTWIFPLKQKSETIHAFNQFKNLVENQFNKKIKVIRCDGGGEYKPVQKCAIDSGI 671

Query: 688  KIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVL 747
            + ++SCP+TSQQNGRAERKHRHV E GLTLLAQA MPL +W +AF  AV LIN LPS V 
Sbjct: 672  QFQMSCPYTSQQNGRAERKHRHVTELGLTLLAQAKMPLSYWWEAFSTAVYLINRLPSSVN 731

Query: 748  GGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCL 807
              +SP  L++ K+ D+ AL+ FG AC+PCL+ Y  HK Q+HT +CV+LG S  HKG+KC+
Sbjct: 732  PNESPYTLVFKKEPDYTALKPFGCACYPCLKPYNQHKLQFHTTRCVFLGYSNSHKGYKCV 791

Query: 808  SSSGRLFISRHVRFNEEEFPFASGFQQVVTTAASSSNVSPSIPLWFSNISGPDIKTTQQN 867
            +S GR+F+SRHV FNE  FPF  GF   + T      V+   P+ F   S P   TT   
Sbjct: 792  NSHGRVFVSRHVVFNENHFPFQEGF---LDTRNPIKVVTNDTPIGFP--SFPAGITTNNT 851

Query: 868  REVPSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHEDSPPSQVEVAENHCSAS 927
             E     V   E P     N+  D Q + ++    +              E A       
Sbjct: 852  AEATDNIVDQQE-PELNDINTVAD-QSVESDTFEHTDENNFSNGETEDSTEAAGRESMEE 911

Query: 928  ESSASTQSSNLPPTPSTVQAGHPMVTRGKAGIFKPKL---WLTHACTDWSVTEPTRIADA 987
             S   T+++  PP    +   H M TR KAG++KPKL    LT    +    EP  +++A
Sbjct: 912  ISQPITETN--PPPQQDITNTHWMRTRSKAGVYKPKLPYIGLTEEAKEGK--EPESVSEA 971

Query: 988  LATPQWREAMDID----------------------------------------------- 1047
            L+ P+W  AMD +                                               
Sbjct: 972  LSIPEWLNAMDAEYKALMNNKTWTLVPFEGQENVISSKWIFKTKYKADGTIERRKARLVA 1031

Query: 1048 ----------------PVVKASTIRVILSIAVTKGWQLRQLDFNNAFLNGRLDEDVYMRQ 1085
                            PVVK+ST+R+ILSIAV   W++RQLD NNAFLNG L E V+M Q
Sbjct: 1032 RGFQQTAGVDYDETFSPVVKSSTVRIILSIAVHLSWEVRQLDINNAFLNGNLKESVFMHQ 1037

[Close]

BLAST of Lag0039869 vs. NCBI nr
Match: KYP50444.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 753.8 bits (1945), Expect = 2.9e-213
Identity = 438/1025 (42.73%), Postives = 589/1025 (57.46%), Query Frame = 0


Query: 129  MTSEVATQVMGYENAQELWAAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKN 188
            MT EVATQ++  E +Q++W   Q L G  +R+   +L+  F ++RKG  KM +YL  MK 
Sbjct: 1    MTQEVATQLLHCETSQQIWEDAQSLAGAHTRSRITFLKTEFHRTRKGGLKMEEYLTKMKE 60

Query: 189  HADNLGQAGSPVNTRSLISQVLLGLDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLEL 248
             AD+L  AGS V+T  L++Q L GLD EYNP+V  + D+  ++W EMQA+LL +E RLE 
Sbjct: 61   IADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQLLTYENRLEQ 120

Query: 249  QNNLKSSLSLSPGASVN--MANSRDSGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARG 308
             NN +S+L+L+P ++++  + N R   N      GG+ N G         GGRGRGRA  
Sbjct: 121  INN-QSNLTLNPSSNISTILYNRRGKSNAFGGGRGGQINRG-------ARGGRGRGRAT- 180

Query: 309  YGSFSNKPVCQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFV 368
                 ++ VCQVC K GH A  CY RFNK ++G    QN  E  + ++ +          
Sbjct: 181  ----KDRIVCQVCCKPGHAASHCYHRFNKNYIG----QNSDEQKSEKDKEQ--------- 240

Query: 369  ANQNVNSCVAAPETVIDPNWYADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIA 428
             N N N+ VA+P TV D +WY DSGASNHVT D N +    E +GK  +T+G+G  LKI 
Sbjct: 241  -NYNFNAYVASPSTVEDLDWYFDSGASNHVTYDQNKVQEVNENDGKSFLTVGNGANLKII 300

Query: 429  FIGNSCLAAEHKNFKLKKVLCVPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKV 488
              G+S L  + K+  LK +L VP I KNL+S+SKL  DN+++VEFHD  C VKDK TG++
Sbjct: 301  ACGDSSLDTQQKSLNLKDILYVPKITKNLLSISKLTFDNDIYVEFHDVACFVKDKLTGRI 360

Query: 489  LLKGVLDEGLYRFDGVKAVTTDTNELPICNLVNSKDINNELSGFVLSSTLNVAIS-KAIW 548
            LL+G + +GLY+  G    +T TN+ P                       +V  S K  W
Sbjct: 361  LLEGKIKDGLYQLPG---GSTSTNKRP-----------------------HVFFSIKETW 420

Query: 549  HKRLGHPSEEVLKSVVKSCNLPLSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDLVH 608
            H++LGHP+ +VL  V+K CN+  S  E+F+FCEACQ+GK+H LPF NS S A +  DLVH
Sbjct: 421  HRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPLDLVH 480

Query: 609  TDLWGPAPLDSVNGFKYYILFIDDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIK 668
            +D+WGPAP+ SV+GFKYY+LF+DD+SRF WIYPLK+K++  +AF+ F  LV+NQFN  IK
Sbjct: 481  SDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIK 540

Query: 669  ALQTDNGGEYVKIHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPL 728
             LQ D GGE+  + ++  + G+++R SCP+TS QNGRAERKHRHVVE+GLTLLAQA MPL
Sbjct: 541  TLQCDGGGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMPL 600

Query: 729  KFWVDAFLVAVLLINGLPSQVLGGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKF 788
             +W +AF  AV LIN LP+QV+  KSP + L+ K  D+ A++ FG AC+PCL+ Y  HK 
Sbjct: 601  HYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKL 660

Query: 789  QYHTEKCVYLGPSPLHKGHKCLSSSGRLFISRHVRFNEEEFPFASGFQQVVTTAASSSNV 848
            Q+HT KCV+LG S  HKG+KCL+S+GR+FISRHV FNE  FPF  GF   + T   +  +
Sbjct: 661  QFHTTKCVFLGYSGSHKGYKCLNSTGRIFISRHVVFNEHHFPFHDGF---LNTRKPAEII 720

Query: 849  SPSIPLWFSNISGPDIKTTQQNREVPSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSL 908
            +    L F                     +SP      T SN + + Q L    +  S+ 
Sbjct: 721  TDPTSLLFP--------------------ISP------TGSNVANEEQRLHTNNNSSSNT 780

Query: 909  MPTHEDSPPSQVEVAENH--CSASESSASTQSSNLPPTPSTVQAGHPMVTRGKAGIFKPK 968
               H      QVE AEN     A+ S  +  +S +     ++   H M TR K GI KPK
Sbjct: 781  KSKH------QVEQAENQNTIDATISQNTFANSRIENNIESINQ-HQMTTRSKMGIIKPK 840

Query: 969  LWLTHAC-TDWSVTEPTRIADALATPQWREAM---------------------------- 1028
                 A        EP    +AL  P+W++AM                            
Sbjct: 841  KPYVGAVEKTLEEQEPETTYEALENPEWKKAMIAEFKALMMNKTWTLVPYQGQKNIIDCK 900

Query: 1029 -------------------------------DID----PVVKASTIRVILSIAVTKGWQL 1085
                                           D D    PV+KA T+R+ILSIAV   W++
Sbjct: 901  WVFKTKYKADGTIERRKARLVAKGFQQTLGLDYDETFSPVIKAITVRIILSIAVHFNWEI 936

[Close]

BLAST of Lag0039869 vs. NCBI nr
Match: PNY01489.1 (copia-like polyprotein, partial [Trifolium pratense])

HSP 1 Score: 713.4 bits (1840), Expect = 4.3e-201
Identity = 435/1121 (38.80%), Postives = 604/1121 (53.88%), Query Frame = 0


Query: 28   LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASVNPTTTEAG 87
            L  I ++KLDR N+ LWK+L LP++R  K +G++ G   CPE+FV +A  S         
Sbjct: 13   LPSIISVKLDRDNYPLWKSLVLPLIRGCKFDGYILGTKECPEQFVTSADKS--------- 72

Query: 88   ATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYENAQELW 147
                             +++NP ++ W+A DQ LLGWL NSM  ++ATQ++  E +++LW
Sbjct: 73   -----------------KKVNPDFQDWMADDQALLGWLMNSMAIDIATQLLHCETSKQLW 132

Query: 148  AAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLIS 207
               Q L G  +++   YL+  F  +RKG  KM +YL  MKN +D L  +GSP++   L+ 
Sbjct: 133  DEAQSLAGAHTKSRIIYLKSEFHNTRKGEMKMEEYLIKMKNLSDKLKLSGSPISNSDLMI 192

Query: 208  QVLLGLDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSSLSLSPGASVNMA 267
            Q L GLD EYNPVV  + D+  +SW ++QA+LL FE RL+  NN  S L+L+  AS N A
Sbjct: 193  QTLNGLDAEYNPVVVKLSDQINLSWVDVQAQLLAFESRLDQLNNF-SGLTLN--ASANFA 252

Query: 268  NSRDSGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGYGSFSNKPVCQVCGKTGHTAL 327
            N  +           R N    RGN R +  RG    RG G  SN   CQVC  TGHTA+
Sbjct: 253  NKTEF----------RGNKFHSRGNWRRSNFRGMRGGRGKGRMSNTK-CQVCSGTGHTAV 312

Query: 328  MCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSCVAAPETVIDPNWY 387
             C  RF++ +           G N     + QG  +AF         VA+P    D  WY
Sbjct: 313  DCSYRFDRSYT----------GRNYSTEADKQGSHSAF---------VASPYHGQDYEWY 372

Query: 388  ADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLAAEHKNFKLKKVLC 447
             DSGASNHVT   +      E+ GK S+ +G+G KLKI   G++ L        L  VL 
Sbjct: 373  FDSGASNHVTHQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKL----NTLNLHDVLY 432

Query: 448  VPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTT 507
            VP I KNL+SVSKL  DN +FVEF    C VKDK TG+ LLKG L +GLY+   +  V+ 
Sbjct: 433  VPQITKNLLSVSKLTADNNIFVEFDANCCSVKDKLTGQTLLKGRLKDGLYQ---LSDVSP 492

Query: 508  DTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSEEVLKSVVKSCNLP 567
             +N+ P C  ++ K+                      WH++LGHP+ +VL+ V+K CN+ 
Sbjct: 493  QSNKDP-CVYMSVKE---------------------SWHRKLGHPNNKVLEKVLKDCNVK 552

Query: 568  LSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFI 627
            +S ++ F FCEACQ+GK H LPF +S+SH  +   L+H+D+WGPAP+ S +GFKYY+ FI
Sbjct: 553  ISPSDQFSFCEACQFGKLHLLPFKSSSSHVQEPLGLIHSDVWGPAPILSPSGFKYYVHFI 612

Query: 628  DDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGEYVKIHQLCNEMGV 687
            DDFSRF WI+PLK+K++ + AF+ F  L +NQFN  IK +Q D GGEY  + ++  E G+
Sbjct: 613  DDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKKIKIIQCDGGGEYKAVQKVSIEAGI 672

Query: 688  KIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVL 747
            + R+SCP+TSQQNGRAERKHRHVVE GLTLLAQA MPL++W +AF  AV LIN L S V 
Sbjct: 673  QFRMSCPYTSQQNGRAERKHRHVVELGLTLLAQAKMPLRYWWEAFSTAVYLINRLSSSVN 732

Query: 748  GGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCL 807
              +SP  L++ ++ D+ AL+ FG AC+PCL+ Y  HK Q+HT +CV++G S  HKG    
Sbjct: 733  PNESPYSLMFKREPDYNALKPFGCACYPCLKPYNQHKLQFHTTRCVFMGYSNSHKGSTTQ 792

Query: 808  SSSGRLFISRHVRFNEEEFPFASGFQQVVTTAASSSNVSPSIPLWFSNISGPDIKTTQQN 867
             + G    S +   N+++    +  Q   +T +S +N                    +++
Sbjct: 793  DAIG----SDNNIVNDQD---TTNDQNTHSTESSDNN-------------------EEEH 852

Query: 868  REVPSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHEDSPPSQVEVAENHCSAS 927
             +   + V+ N        N ST                   +D        +E+  S +
Sbjct: 853  ADNSESFVNTN--------NGST-------------------QDIEVDNFVDSEDRNSPT 912

Query: 928  ESSASTQSSNLPPTPSTVQAGHPMVTRGKAGIFKPKL-WLTHACTDWSVTEPTRIADALA 987
             +  S Q ++   T +     H + TR K GI KPKL ++    TD    EP  + +AL 
Sbjct: 913  ITGTSQQQAHQDNTNT-----HGIRTRSKNGIHKPKLPYVGMTETDSEEKEPESVKEALD 972

Query: 988  TPQWREAMD--------------------------------------------------- 1047
             P W+EAMD                                                   
Sbjct: 973  KPMWKEAMDKEYKALMSNYTWTLVPFQAQENIIDSKWIFKTKYKSDGSIERRKARLVAKG 987

Query: 1048 ------------IDPVVKASTIRVILSIAVTKGWQLRQLDFNNAFLNGRLDEDVYMRQPP 1085
                          PVVK+ST+R+IL+IAV   W++RQLD NNAFLNG+L E V+M QP 
Sbjct: 1033 FQQTAGLDFHETFSPVVKSSTVRIILTIAVHFNWEVRQLDINNAFLNGKLKETVFMHQPE 987

[Close]

BLAST of Lag0039869 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 2.4e-138
Identity = 421/1540 (27.34%), Postives = 641/1540 (41.62%), Query Frame = 0


Query: 20   NSPPLNQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASV 79
            N+  LN  ++ +T  KL   N+L+W      +   Y+L G L G++  P           
Sbjct: 12   NTSILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMP----------- 71

Query: 80   NPTTTEAGATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMG 139
             P T    A               A  +NP Y  W   D+L+   +  +++  V   V  
Sbjct: 72   -PATIGTDA---------------APRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSR 131

Query: 140  YENAQELWAAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSP 199
               A ++W  +++++   S      LR   +Q  KG   + DY++ +    D L   G P
Sbjct: 132  ATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKP 191

Query: 200  VNTRSLISQVLLGLDEEYNPVVAMIQDR-AGISWSEMQAELLVFEKRLELQNNLKSSLSL 259
            ++    + +VL  L EEY PV+  I  +    + +E+   LL  E ++       SS ++
Sbjct: 192  MDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKI----LAVSSATV 251

Query: 260  SPGASVNMANSRDSGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGY-GSFSNKPV-- 319
             P  + N  + R++    N + G R N    R N   +    +     +  +  +KP   
Sbjct: 252  IP-ITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLG 311

Query: 320  -CQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQ-NVNS 379
             CQ+CG  GH+A  C Q   + F+  +               N Q  P+ F   Q   N 
Sbjct: 312  KCQICGVQGHSAKRCSQL--QHFLSSV---------------NSQQPPSPFTPWQPRANL 371

Query: 380  CVAAPETVIDPNWYADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCL 439
             + +P +    NW  DSGA++H+T+D+NNL+    Y G + V + DG+ + I+  G++ L
Sbjct: 372  ALGSPYS--SNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSL 431

Query: 440  AAEHKNFKLKKVLCVPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLD 499
            + + +   L  +L VP+I KNL+SV +L   N V VEF      VKD +TG  LL+G   
Sbjct: 432  STKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTK 491

Query: 500  EGLYRFDGVKAVTTDTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPS 559
            + LY             E PI +       +  +S F   S+     + + WH RLGHP+
Sbjct: 492  DELY-------------EWPIAS-------SQPVSLFASPSS---KATHSSWHARLGHPA 551

Query: 560  EEVLKSVVKSCNLPLSVNESFKF--CEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGP 619
              +L SV+ + +L + +N S KF  C  C   KS+ +PF  ST ++    + +++D+W  
Sbjct: 552  PSILNSVISNYSLSV-LNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS- 611

Query: 620  APLDSVNGFKYYILFIDDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDN 679
            +P+ S + ++YY++F+D F+R+ W+YPLK+K++  E F+ F  L++N+F + I    +DN
Sbjct: 612  SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDN 671

Query: 680  GGEYVKIHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDA 739
            GGE+V + +  ++ G+    S PHT + NG +ERKHRH+VETGLTLL+ AS+P  +W  A
Sbjct: 672  GGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYA 731

Query: 740  FLVAVLLINGLPSQVLGGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEK 799
            F VAV LIN LP+ +L  +SP + L+G   ++  LRVFG AC+P LR Y  HK    + +
Sbjct: 732  FAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQ 791

Query: 800  CVYLGPSPLHKGHKCLS-SSGRLFISRHVRFNEEEFPFASGFQQV--------------- 859
            CV+LG S     + CL   + RL+ISRHVRF+E  FPF++    +               
Sbjct: 792  CVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWS 851

Query: 860  ----------VTTAASSSN--------VSPSIPLWFSNISGPDIKTTQQNREVPSTGVSP 919
                      V  A S S+         SPS P   S +S         N +   +   P
Sbjct: 852  PHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVS-------SSNLDSSFSSSFP 911

Query: 920  NECPPTTPSNSSTDVQPLPAELSPQS-SLMPTHEDSP----PSQV-----EVAENHCSAS 979
            +   PT P  +       P +   Q+ S   T +++P    PSQ+       A++  S+ 
Sbjct: 912  SSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSP 971

Query: 980  ESSASTQSSNLPPTPSTV----------------QA---GHPMVTRGKAGIFKPKLWLTH 1039
              + S  SS+  PTP ++                QA    H M TR KAGI KP    + 
Sbjct: 972  SPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSL 1031

Query: 1040 ACTDWSVTEPTRIADALATPQWREAM---------------------------------- 1099
            A +  + +EP     AL   +WR AM                                  
Sbjct: 1032 AVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTK 1091

Query: 1100 ------------------------------DIDPVVKASTIRVILSIAVTKGWQLRQLDF 1159
                                             PV+K+++IR++L +AV + W +RQLD 
Sbjct: 1092 KYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1151

Query: 1160 NNAFLNGRLDEDVYMRQPPGYEDAKCSNYVCKLDKAIYGLKQAPRAWNNTLKATLLSWGY 1209
            NNAFL G L +DVYM QPPG+ D    NYVCKL KA+YGLKQAPRAW   L+  LL+ G+
Sbjct: 1152 NNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGF 1211

[Close]

BLAST of Lag0039869 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 1.1e-135
Identity = 410/1535 (26.71%), Postives = 628/1535 (40.91%), Query Frame = 0


Query: 20   NSPPLNQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASV 79
            N+  LN  ++ +T  KL   N+L+W      +   Y+L G L G++P P           
Sbjct: 12   NTNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPP---------- 71

Query: 80   NPTTTEAGATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMG 139
                           A+   ++ P   +NP Y  W   D+L+   +  +++  V   V  
Sbjct: 72   ---------------ATIGTDAVP--RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSR 131

Query: 140  YENAQELWAAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSP 199
               A ++W  +++++   S      LR +                      D L   G P
Sbjct: 132  ATTAAQIWETLRKIYANPSYGHVTQLRFI-------------------TRFDQLALLGKP 191

Query: 200  VNTRSLISQVLLGLDEEYNPVVAMIQDR-AGISWSEMQAELLVFEKRLELQNNLKSSLSL 259
            ++    + +VL  L ++Y PV+  I  +    S +E+   L+  E +L   N    S  +
Sbjct: 192  MDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALN----SAEV 251

Query: 260  SPGASVNMANSRDSGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGYGSFSNKPV--- 319
             P  + N+   R++   RNQ+  G  N  +   N R    +         +   KP    
Sbjct: 252  VP-ITANVVTHRNTNTNRNQNNRG-DNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGR 311

Query: 320  CQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSCV 379
            CQ+C   GH+A  C Q             ++ +    Q        P    AN  VNS  
Sbjct: 312  CQICSVQGHSAKRCPQ------------LHQFQSTTNQQQSTSPFTPWQPRANLAVNSPY 371

Query: 380  AAPETVIDPNWYADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLAA 439
             A       NW  DSGA++H+T+D+NNL+    Y G + V I DG+ + I   G++ L  
Sbjct: 372  NA------NNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPT 431

Query: 440  EHKNFKLKKVLCVPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDEG 499
              ++  L KVL VP+I KNL+SV +L   N V VEF      VKD +TG  LL+G   + 
Sbjct: 432  SSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDE 491

Query: 500  LYRFDGVKAVTTDTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSEE 559
            LY +    +        P     +S                        WH RLGHPS  
Sbjct: 492  LYEWPIASSQAVSMFASPCSKATHSS-----------------------WHSRLGHPSLA 551

Query: 560  VLKSVVKSCNLPLSVNESFKF--CEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAP 619
            +L SV+ + +LP+ +N S K   C  C   KSH +PF NST  +    + +++D+W  +P
Sbjct: 552  ILNSVISNHSLPV-LNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SP 611

Query: 620  LDSVNGFKYYILFIDDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGG 679
            + S++ ++YY++F+D F+R+ W+YPLK+K++  + F+ F +LV+N+F + I  L +DNGG
Sbjct: 612  ILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGG 671

Query: 680  EYVKIHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFL 739
            E+V +    ++ G+    S PHT + NG +ERKHRH+VE GLTLL+ AS+P  +W  AF 
Sbjct: 672  EFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFS 731

Query: 740  VAVLLINGLPSQVLGGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCV 799
            VAV LIN LP+ +L  +SP + L+G+  +++ L+VFG AC+P LR Y  HK +  +++C 
Sbjct: 732  VAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCA 791

Query: 800  YLGPSPLHKGHKCLS-SSGRLFISRHVRFNEEEFPFASGFQQVVTTAASSSNVSPSIP-- 859
            ++G S     + CL   +GRL+ SRHV+F+E  FPF++    V T+    S+ +P+ P  
Sbjct: 792  FMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSH 851

Query: 860  ---------LWFSNISGPDIKTTQQNREVPS----TGVSPNECPPTTPSNSSTDVQPLPA 919
                     L      GP + T+ +    PS    T VS +  P ++ S+ S+     P+
Sbjct: 852  TTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPS 911

Query: 920  ELSPQSSLMP-------------------------THEDSPPSQVEVAENHCSA------ 979
               PQ +  P                          +++SP  Q  ++  H         
Sbjct: 912  HNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSIS 971

Query: 980  ---SESSASTQSSNLP---PTPSTVQAG-------HPMVTRGKAGIFKPKLWLTHACTDW 1039
               S SS+ST +  LP   P P  +Q         H M TR K GI KP    ++A +  
Sbjct: 972  EPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLA 1031

Query: 1040 SVTEPTRIADALATPQWREAM--------------------------------------- 1099
            + +EP     A+   +WR+AM                                       
Sbjct: 1032 ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD 1091

Query: 1100 -------------------------DIDPVVKASTIRVILSIAVTKGWQLRQLDFNNAFL 1159
                                        PV+K+++IR++L +AV + W +RQLD NNAFL
Sbjct: 1092 GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1151

Query: 1160 NGRLDEDVYMRQPPGYEDAKCSNYVCKLDKAIYGLKQAPRAWNNTLKATLLSWGY----- 1209
             G L ++VYM QPPG+ D    +YVC+L KAIYGLKQAPRAW   L+  LL+ G+     
Sbjct: 1152 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1211

[Close]

BLAST of Lag0039869 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 4.7e-73
Identity = 273/1014 (26.92%), Postives = 433/1014 (42.70%), Query Frame = 0


Query: 112  ESWVAVDQLLLGWLYNSMTSEVATQVMGYENAQELWAAIQELFGVQSRAEEDYL-RQVFQ 171
            E W  +D+     +   ++ +V   ++  + A+ +W  ++ L+  ++   + YL +Q++ 
Sbjct: 50   EDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYA 109

Query: 172  QSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLISQVLLGLDEEY-NPVVAMIQDRAG 231
                  +    +L +       L   G  +        +L  L   Y N    ++  +  
Sbjct: 110  LHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTT 169

Query: 232  ISWSEMQAELLVFEKRLELQNNLKSSLSLSPGASVNMANSRDSGNQRNQSYGGRTNNGFG 291
            I   ++ + LL+ EK  +   N   +L ++ G              R +SY  R++N +G
Sbjct: 170  IELKDVTSALLLNEKMRKKPENQGQAL-ITEG--------------RGRSY-QRSSNNYG 229

Query: 292  RGNQRGAGGRGRGRARGYGSFSNKPVCQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEG 351
            R     +G RG+ + R      N   C  C + GH    C          P   + +GE 
Sbjct: 230  R-----SGARGKSKNRSKSRVRN---CYNCNQPGHFKRDC----------PNPRKGKGET 289

Query: 352  ANRQNNQNGQGQPAAFVA-NQNVNSCVAAPETVI-----DPNWYADSGASNHVTADYNNL 411
            + ++N+ N     AA V  N NV   +   E  +     +  W  D+ AS+H T   +  
Sbjct: 290  SGQKNDDN----TAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLF 349

Query: 412  ANPVEYEGKESVTIGDGNKLKIAFIGNSCLAAE-HKNFKLKKVLCVPSIAKNLVSVSKLA 471
               V  +   +V +G+ +  KIA IG+ C+         LK V  VP +  NL+S   L 
Sbjct: 350  CRYVAGD-FGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALD 409

Query: 472  KDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTTDTNELPICNLVNSKD 531
            +D       +  + L K      V+ KGV    LYR                    N++ 
Sbjct: 410  RDGYESYFANQKWRLTKG---SLVIAKGVARGTLYR-------------------TNAEI 469

Query: 532  INNELSGFVLSSTLNVAISKAIWHKRLGHPSEEVLKSVVKSCNLPLSVNESFKFCEACQY 591
               EL      +     IS  +WHKR+GH SE+ L+ + K   +  +   + K C+ C +
Sbjct: 470  CQGEL------NAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLF 529

Query: 592  GKSHALPFPNSTSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFIDDFSRFVWIYPLKRK 651
            GK H + F  S+   L+  DLV++D+ GP  ++S+ G KY++ FIDD SR +W+Y LK K
Sbjct: 530  GKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTK 589

Query: 652  NEALEAFVHFTALVKNQFNSSIKALQTDNGGEYV--KIHQLCNEMGVKIRLSCPHTSQQN 711
            ++  + F  F ALV+ +    +K L++DNGGEY   +  + C+  G++   + P T Q N
Sbjct: 590  DQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHN 649

Query: 712  GRAERKHRHVVETGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVLGGKSPMELLYGKK 771
            G AER +R +VE   ++L  A +P  FW +A   A  LIN  PS  L  + P  +   K+
Sbjct: 650  GVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKE 709

Query: 772  IDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCLSSSGRLFI-SRHV 831
            + +  L+VFG   F  + K Q  K    +  C+++G      G++      +  I SR V
Sbjct: 710  VSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDV 769

Query: 832  RFNEEEFPFASGFQQVVTTAASSSNVSPSIPLWFSNISGPDIKTTQQNREVPSTGVSPNE 891
             F E E         V T A  S  V   I         P+  T      +PST  +P  
Sbjct: 770  VFRESE---------VRTAADMSEKVKNGII--------PNFVT------IPSTSNNPTS 829

Query: 892  CPPTTPSNSSTDVQPLPAELSPQSSLM---------PTHEDSPPSQVEVAENHCSASESS 951
               TT   S    Q  P E+  Q   +         PT  +     +  +E     S   
Sbjct: 830  AESTTDEVSEQGEQ--PGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRY 889

Query: 952  ASTQ----SSNLPPTPSTVQAGHP------------MVTRGKAGIFK----PK------- 1011
             ST+    S +  P        HP            M +  K G +K    PK       
Sbjct: 890  PSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKC 949

Query: 1012 LWLTHACTDWSVTEPTRIADALATPQWREAMDID------PVVKASTIRVILSIAVTKGW 1071
             W+     D    +  R    L    + +   ID      PVVK ++IR ILS+A +   
Sbjct: 950  KWVFKLKKDGD-CKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDL 970

HSP 2 Score: 77.0 bits (188), Expect = 2.1e-12
Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 1081 SWGYSIIFKYRDSSYRSSNISALALAST------------EVIWLRQLMTEIGFPCCSKS 1140
            S GY   F     S++S     +AL++T            E+IWL++ + E+G     + 
Sbjct: 1193 STGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEY 1252

Query: 1141 VLWCDNVSAGALAANPVFHARTKHIEIDVHFVRDQVLQGKLEVRYIPSNEQPADCLTKTL 1200
            V++CD+ SA  L+ N ++HARTKHI++  H++R+ V    L+V  I +NE PAD LTK +
Sbjct: 1253 VVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVV 1312

Query: 1201 SHSQFAYLRCKLGV 1203
              ++F   +  +G+
Sbjct: 1313 PRNKFELCKELVGM 1325

[Close]

BLAST of Lag0039869 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 171.8 bits (434), Expect = 6.2e-41
Identity = 240/1092 (21.98%), Postives = 416/1092 (38.10%), Query Frame = 0


Query: 108  NPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYENAQELWAAIQELFGVQSRAEEDYLR- 167
            N + +SW   ++     +   ++            A+++   +  ++  +S A +  LR 
Sbjct: 42   NEVDDSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRK 101

Query: 168  QVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLISQVLLGLDEEYNPVVAMIQD 227
            ++          +  +  I       L  AG+ +     IS +L+ L   Y+ ++  I+ 
Sbjct: 102  RLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIE- 161

Query: 228  RAGISWSEMQAELLVFEKR-LELQNNLKSSLSLSPGASVNMANSRDSGNQRNQSYGGRTN 287
                + SE    L   + R L+ +  +K+  + +    +N     ++   +N  +  R  
Sbjct: 162  ----TLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVT 221

Query: 288  NGFGRGNQRGAGGRGRGRARGYGSFSNKPVCQVCGKTGHTALMCYQRFNKEFVGPIYNQN 347
                           + +    G+   K  C  CG+ GH    C+      +   + N+N
Sbjct: 222  ---------------KPKKIFKGNSKYKVKCHHCGREGHIKKDCF-----HYKRILNNKN 281

Query: 348  RGEGANRQNNQNGQGQPAAFVANQNVNSCVAAPETVIDPNWYADSGASNHVTADYNNLAN 407
            +    N +  Q       AF+  +  N+ V     + +  +  DSGAS+H+  D +   +
Sbjct: 282  K---ENEKQVQTATSHGIAFMVKEVNNTSV-----MDNCGFVLDSGASDHLINDESLYTD 341

Query: 408  PVEYEGKESVTIGDGNKLKIAFIGNSCLAAEHKNFKLKKVLCVPSIAKNLVSVSKLAKDN 467
             VE      + +    +   A               L+ VL     A NL+SV +L ++ 
Sbjct: 342  SVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRL-QEA 401

Query: 468  EVFVEFHDGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTTDTNELPICNL----VNSK 527
             + +EF      +       V   G+L                 N +P+ N     +N+K
Sbjct: 402  GMSIEFDKSGVTISKNGLMVVKNSGML-----------------NNVPVINFQAYSINAK 461

Query: 528  DINNELSGFVLSSTLNVAISKAIWHKRLGHPSEEVL-----KSVVKSCNLPLSVNESFKF 587
              NN                  +WH+R GH S+  L     K++    +L  ++  S + 
Sbjct: 462  HKNN----------------FRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEI 521

Query: 588  CEACQYGKSHALPFP--NSTSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFIDDFSRFV 647
            CE C  GK   LPF      +H      +VH+D+ GP    +++   Y+++F+D F+ + 
Sbjct: 522  CEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYC 581

Query: 648  WIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGEYV--KIHQLCNEMGVKIRLS 707
              Y +K K++    F  F A  +  FN  +  L  DNG EY+  ++ Q C + G+   L+
Sbjct: 582  VTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLT 641

Query: 708  CPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVL--GGK 767
             PHT Q NG +ER  R + E   T+++ A +   FW +A L A  LIN +PS+ L    K
Sbjct: 642  VPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSK 701

Query: 768  SPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCLSSS 827
            +P E+ + KK   + LRVFG+  +  ++  Q  KF   + K +++G  P   G K   + 
Sbjct: 702  TPYEMWHNKKPYLKHLRVFGATVYVHIKNKQG-KFDDKSFKSIFVGYEP--NGFKLWDAV 761

Query: 828  GRLFI-SRHVRFNEEEFPFASGFQ-QVVTTAASSSNVSPSIPLWFSNISGPDIKTTQQNR 887
               FI +R V  +E     +   + + V    S  + + + P    N S   I+T   N 
Sbjct: 762  NEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFP----NDSRKIIQTEFPNE 821

Query: 888  EVPSTGV-----SPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHEDSP--------PS 947
                  +     S        P++S   +Q      S +   +   +DS          S
Sbjct: 822  SKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNES 881

Query: 948  QVEVAENHCSASESSASTQSSNLPPTPS----------TVQAGHPMVTRGKAGI-FKPKL 1007
            +    ++H + S+ S +   S    T            T   G  ++ R    +  KP++
Sbjct: 882  KKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQI 941

Query: 1008 --------------------------------------WLTHACTD---------WSVTE 1067
                                                  W     T+         W++T+
Sbjct: 942  SYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITK 1001

Query: 1068 -----------------------PTRIADALATPQWREAMDID------PVVKASTIRVI 1080
                                   P R    L    + +   ID      PV + S+ R I
Sbjct: 1002 RPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFI 1056

HSP 2 Score: 74.7 bits (182), Expect = 1.0e-11
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 1093 SSYRSSNISALALASTEVIWLRQLMTEIGFPCCSKSVLWCDNVSAGALAANPVFHARTKH 1152
            +S   +   AL  A  E +WL+ L+T I     +   ++ DN    ++A NP  H R KH
Sbjct: 1291 ASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKH 1350

Query: 1153 IEIDVHFVRDQVLQGKLEVRYIPSNEQPADCLTKTLSHSQFAYLRCKLGVAE 1205
            I+I  HF R+QV    + + YIP+  Q AD  TK L  ++F  LR KLG+ +
Sbjct: 1351 IDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQ 1402

[Close]

BLAST of Lag0039869 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-22
Identity = 102/378 (26.98%), Postives = 159/378 (42.06%), Query Frame = 0


Query: 389 DSGASNHV--TADYNNLANPVEYEGKESVTIGDGNK--LKIAFIGNSCLAAEHKNFKLKK 448
           DSGAS  +  +A Y + A P        + I D  K  + I  IGN     ++      K
Sbjct: 457 DSGASQTLVRSAHYLHHATP-----NSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIK 516

Query: 449 VLCVPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVK---DKDTGKVLLKGVLDEGLYRFDG 508
            L  P+IA +L+S+S+LA  N          C  +   ++  G VL   V     Y    
Sbjct: 517 ALHTPNIAYDLLSLSELANQNIT-------ACFTRNTLERSDGTVLAPIVKHGDFYWLSK 576

Query: 509 VKAVTTDTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPS-EEVLKSV 568
              + +  ++L I N+  SK +N                   + H+ LGH +   + KS+
Sbjct: 577 KYLIPSHISKLTINNVNKSKSVNK--------------YPYPLIHRMLGHANFRSIQKSL 636

Query: 569 VKSCNLPLS------VNESFKFCEACQYGKS----HALPFPNSTSHALDKFDLVHTDLWG 628
            K+    L        N S   C  C  GKS    H          + + F  +HTD++G
Sbjct: 637 KKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFG 696

Query: 629 PAPLDSVNGFKYYILFIDDFSRFVWIYPL--KRKNEALEAFVHFTALVKNQFNSSIKALQ 688
           P      +   Y+I F D+ +RF W+YPL  +R+   L  F    A +KNQFN+ +  +Q
Sbjct: 697 PVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQ 756

Query: 689 TDNGGEYVK--IHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLK 745
            D G EY    +H+     G+    +    S+ +G AER +R ++    TLL  + +P  
Sbjct: 757 MDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNH 808

[Close]

BLAST of Lag0039869 vs. ExPASy TrEMBL
Match: A0A2Z6MBG6 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_77270 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 9.3e-242
Identity = 536/1457 (36.79%), Postives = 714/1457 (49.00%), Query Frame = 0


Query: 33   TIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASVNPTTTEAGATSSG 92
            ++KLDR N+ LWK+L LP++R  KL+G++ G   CPE+F+ ++ +S N            
Sbjct: 18   SVKLDRNNYPLWKSLVLPVIRGCKLDGYMLGTEGCPEEFITSSDSSKNK----------- 77

Query: 93   AVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYENAQELWAAIQE 152
                           N  +  W A DQ LLGW+ NSMT+E+ATQ++  E +++LW   Q 
Sbjct: 78   ---------------NSAFVEWQANDQRLLGWMLNSMTTEIATQLLHCETSKQLWDEAQS 137

Query: 153  LFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLISQVLLG 212
            L G  +R++  YL+  F   RKG  KM DYL  MKN  D L  AG+PV+T  LI Q L G
Sbjct: 138  LAGAHTRSQIIYLKSEFHSIRKGEMKMEDYLIKMKNLVDKLKLAGNPVSTSDLIIQTLNG 197

Query: 213  LDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSSLSLSPGASVNMANSRDS 272
            LD EYNPVV  + D+  +SW ++QA+LL FE R+E  NNL    +L+  A+ N+AN    
Sbjct: 198  LDSEYNPVVVKLSDQTTLSWVDLQAQLLTFESRIEQLNNL---TNLTLNATANVAN---- 257

Query: 273  GNQRNQSYGGRTNNGFGRGNQRG-AGGRGRGRARGYGSFSNKPVCQVCGKTGHTALMCYQ 332
               R+   G  +NN +   N RG  GGRGRG+       S K  CQVCG + H A+ C+ 
Sbjct: 258  ---RSDHRGKSSNNNWRGSNSRGWRGGRGRGK-------SGKNPCQVCGLSNHIAIDCFH 317

Query: 333  RFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSCVAAPETVIDPNWYADSG 392
            RF+K +       N   G ++Q + N      AF+A+QN         +V D +WY DSG
Sbjct: 318  RFDKTY----SRSNHSAGHDKQGSHN------AFLASQN---------SVEDYDWYFDSG 377

Query: 393  ASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLAAEHKNFKLKKVLCVPSI 452
            ASNHVT       +  E+ GK S+ +G+G KL I   G+S L    K+  L  +L VP+I
Sbjct: 378  ASNHVTHQTEKFQDLTEHHGKNSLVVGNGEKLAILATGSSKL----KSLNLHDILYVPNI 437

Query: 453  AKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTTDTNE 512
             KNL+SVSKLA DN + VEF +  C VKDK TGKV+LKG+L +GLY+  G K        
Sbjct: 438  TKNLLSVSKLAADNNILVEFDENCCFVKDKLTGKVILKGLLKDGLYQLSGTK-------- 497

Query: 513  LPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSEEVLKSVVKSCNLPLSVN 572
                            S FV          K  WH+RLGHP+ +VL  V++SC + +  +
Sbjct: 498  -------------RNPSAFV--------SVKESWHRRLGHPNNKVLDKVLESCKVKVPPS 557

Query: 573  ESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFIDDFS 632
            ++F FCEACQYGK H LPF +S+SHA +  +LVHTD+WGPAP+ + +GFKYY+ F+DDFS
Sbjct: 558  DNFSFCEACQYGKMHLLPFKSSSSHAQEPLELVHTDVWGPAPIMTSSGFKYYVHFVDDFS 617

Query: 633  RFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGEYVKIHQLCNEMGVKIRL 692
            RF WIYPLK+K+E ++AF+ F  L +NQFN  IK +Q D GGEY  + +L  E G++ R+
Sbjct: 618  RFTWIYPLKQKSETVQAFIQFKNLTENQFNKRIKVIQCDGGGEYKPVQKLAVEAGIQFRM 677

Query: 693  SCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVLGGKS 752
            SCP+TSQQNGRAERKHRH+ E GLTLLAQA MPL +W +AF  AV LIN LPSQV   +S
Sbjct: 678  SCPYTSQQNGRAERKHRHITEFGLTLLAQAQMPLHYWWEAFSTAVYLINRLPSQVTQNES 737

Query: 753  PMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCLSSSG 812
            P  L+  K+ D++ L+ FG AC+PCL+ Y  HK QYHT +CV+LG S  HKG+KCL+S G
Sbjct: 738  PYSLMLQKEPDYKLLKTFGCACYPCLKPYNQHKLQYHTTRCVFLGYSNSHKGYKCLNSHG 797

Query: 813  RLFISRHVRFNEEEFPFASGFQQVVTTAASSSNV-SPSIPLWFSNISGPDIKTTQQNREV 872
            R+FISRHV FNE+ FPF  GF    +   ++ NV S S PL           T     + 
Sbjct: 798  RIFISRHVIFNEDHFPFHDGFLNTRSPLKTTINVPSTSFPLC----------TAGNVIDD 857

Query: 873  PSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHEDSPPSQVEVAENHCSASESS 932
             S  +   E P  T +  S DV                + D+  +    +E++ +  E+ 
Sbjct: 858  ASMPILEAENPAETNTEDSQDV----------------NSDTEQTNNGPSEDNTTHEETL 917

Query: 933  ASTQSSNLPPTPSTVQAGHPMVTRGKAGIFKPKL---WLTHACTDWSVTEPTRIADALAT 992
              TQ  ++          H + TR K+GI KPKL    LT    D    EP    +AL+ 
Sbjct: 918  DITQQQSVGEASQNTNTSHAIHTRSKSGIHKPKLPYIGLTETYKD--TMEPANAKEALSR 977

Query: 993  PQWREAMD---------------------------------------------------- 1052
            P W+EAM                                                     
Sbjct: 978  PLWKEAMQKEFEALMSNKTWILVPYQNQENIVDSKWVFKTKYKPDGSLERRKARLVAKGF 1037

Query: 1053 -----------IDPVVKASTIRVILSIAVTKGWQLRQLDFNNAFLNGRLDEDVYMRQPPG 1112
                         PV+KAST+R+ILSIAV   W++RQLD NNAFLNG L E V+M QP G
Sbjct: 1038 QQTAGIDYEETFSPVIKASTVRIILSIAVHLNWEVRQLDINNAFLNGHLKETVFMHQPEG 1097

Query: 1113 YEDAKCSNYVCKLDKAIYGLKQAPRAWNNTLKATLLSWGYS--------IIFKYRD---- 1172
            + D+   N++CKL KAIYGLKQAPRAW ++LK  LL+WG+          + K +D    
Sbjct: 1098 FVDSTKPNHICKLSKAIYGLKQAPRAWFDSLKTALLNWGFQNTKSDSSLFLLKGKDHITF 1157

Query: 1173 ------------------------------------------------------------ 1207
                                                                        
Sbjct: 1158 LLIYVDDIIVTGSNGKFLQAFIKQLNDAFSLKDLGHLHYFLGIEVQRDASGMYLKQSKYI 1217

[Close]

BLAST of Lag0039869 vs. ExPASy TrEMBL
Match: A0A803PM38 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 4.3e-239
Identity = 534/1434 (37.24%), Postives = 718/1434 (50.07%), Query Frame = 0


Query: 22   PPLNQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASVNP 81
            P     LNQ   +KLDR NF LW+ +   I+R ++L+G+L G  P P++F+ +       
Sbjct: 38   PQFGSTLNQPFALKLDRNNFSLWRTMVSAIVRGHRLDGYLKGTLPKPQEFLSS------- 97

Query: 82   TTTEAGATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYE 141
            T  +   +S G             ++NP +E W+  DQLLLGWLY SMT  +A +VMG +
Sbjct: 98   TDLDGSVSSVG-------------QVNPAFEQWIVNDQLLLGWLYGSMTEGIACEVMGCD 157

Query: 142  NAQELWAAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVN 201
            ++  LW A++ELFG  S+A+ D  R   Q +RKG   M DYLR  +  AD L  AG P  
Sbjct: 158  SSASLWTALEELFGAHSKAKMDEYRTKIQTARKGALSMADYLRQKRQWADVLALAGEPYP 217

Query: 202  TRSLISQVLLGLDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSSLSLS-- 261
               L+S VL GLD EY P+V +I+ R   +W ++Q  LL  + ++E  ++   S  L+  
Sbjct: 218  ENQLVSNVLSGLDIEYLPMVLLIEARGSTTWQQLQDMLLSLDSKMERLHSFSGSSKLTGV 277

Query: 262  -PGASVNMAN-----SRDSGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGYGSFSNK 321
                S ++AN       + GN  N + GG +NN       RG GGR  G          +
Sbjct: 278  PMNPSASLANKGPHPGANRGNHNNNNRGGHSNNRGSNNRSRGRGGRTSG---------PR 337

Query: 322  PVCQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNS 381
            P CQVCGK GH+A  CY R                                         
Sbjct: 338  PTCQVCGKYGHSAAHCYNR----------------------------------------- 397

Query: 382  CVAAPETVIDPNWYADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIG-NSC 441
                             GASNH+T++ N +    EY GKE VT+ +GN+L I  IG  S 
Sbjct: 398  -----------------GASNHITSEINKMNLKEEYNGKEKVTVANGNRLPIHHIGLGSL 457

Query: 442  LAAEHKNFKLKKVLCVPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVL 501
                     LK++L VPSI KNL+S+SKL  DN V VEF    C VKDK+TG+V+LKG L
Sbjct: 458  QTLSASPLILKEILHVPSITKNLLSISKLTSDNNVCVEFLSDLCFVKDKETGQVVLKGKL 517

Query: 502  DEGLYRFDGVKAVTT-DTNELPICNLVNSKDINNELSGFVLSSTLNVAIS--KAIWHKRL 561
             +GLY+FD   + T+  +N    C    S  + + +   V     N  +   K  WH+RL
Sbjct: 518  KDGLYQFDAPTSTTSMSSNRSISCPTSFSGLVVSAVESNVTKPMANQLLCSIKDRWHRRL 577

Query: 562  GHPSEEVLKSVVKSCNLPLSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLW 621
            GHPS  VL +V+   N+  ++N S  FC+ACQ GKSH+LPF  +   A    +LVHTD+W
Sbjct: 578  GHPSIRVLDTVLHKINVK-NINSSLSFCDACQLGKSHSLPFKVNPKRATAPLELVHTDIW 637

Query: 622  GPAPLDSVNGFKYYILFIDDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQT 681
            GP+P+ S   F+YYI FIDDFSR+ WIYPLK K+EAL AFV F  LV+NQFNS +K +QT
Sbjct: 638  GPSPIMSNTNFRYYIHFIDDFSRYTWIYPLKAKSEALAAFVQFKLLVENQFNSRVKRVQT 697

Query: 682  DNGGEYVKIHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWV 741
            D GGEY    +  ++ G+  +  CPHTS QNGRAERKHRH+VE GLTLLAQA +P K+W 
Sbjct: 698  DWGGEYQGFPRFGSDHGIGFQHPCPHTSGQNGRAERKHRHIVEMGLTLLAQAHVPQKYWW 757

Query: 742  DAFLVAVLLINGLPSQVLGGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHT 801
            DAF  AV LIN LP+ VL  K+P E+L+ ++ D++ L+VFG +CFPCLR YQ HKFQ+H+
Sbjct: 758  DAFQTAVYLINRLPTPVLKLKTPFEVLFKQQPDYKFLKVFGVSCFPCLRAYQNHKFQFHS 817

Query: 802  EKCVYLGPSPLHKGHKCLSSSGRLFISRHVRFNEEEFPFASGFQQVVTTAASSSNVSPSI 861
             KCV LG S  HKG+KCLSS+GRL+ISR V FNE+EFPF SGF   + T    + VS  +
Sbjct: 818  TKCVNLGYSDKHKGYKCLSSTGRLYISRDVIFNEDEFPFKSGF---LNTNKPETPVSVLV 877

Query: 862  PLWFSNISGPDIKTTQQNREVPSTGVSPNE----CPPTT----PSNSSTDVQPLPAELSP 921
            P W ++ S  + +++ QN    S G +  +      PTT    P  S+         +S 
Sbjct: 878  PFWTAS-SFVNSQSSSQNDFSSSIGNNQTDEVDHGTPTTSRVVPDLSTFQGNDTDHVISD 937

Query: 922  QSSLMPTHEDSPPSQVEVAENHCSASESSASTQSSNLPPTPSTVQAGHPMVTRGKAGIFK 981
              ++    +       +      +A     S    NL    ST    HPM+TR KAGIFK
Sbjct: 938  FGNIDRISDVQIQQHADTTTLESAADPIDTSASDHNLKAVVST----HPMITRAKAGIFK 997

Query: 982  PKLWLTHACTDWSVTEPTRIADALATPQWREAMD-------------------------- 1041
            PK +LT      + +EP  I +AL    W  AM                           
Sbjct: 998  PKTYLTQTKWIGNSSEPQSIEEALQHKGWNNAMSSEVHALARNGTWKLVPRLPHMHIIDN 1057

Query: 1042 -------------------------------------IDPVVKASTIRVILSIAVTKGWQ 1101
                                                   PV+KAST+R++LSIAVTK W+
Sbjct: 1058 KWVYKEKRNADGSFQRLKARLVAKGFTQRPGVDFSETFSPVIKASTVRIVLSIAVTKEWE 1117

Query: 1102 LRQLDFNNAFLNGRLDEDVYMRQPPGYEDAKCSNYVCKLDKAIYGLKQAPRAWNNTLKAT 1161
            +RQLD NNAFLNG + ED+YM+QP G+ED    N+VCKL K+IYGL+QAPRAW + LKAT
Sbjct: 1118 VRQLDINNAFLNGHITEDIYMKQPLGFEDKNKPNHVCKLIKSIYGLRQAPRAWFDKLKAT 1177

Query: 1162 LLSWGY------SIIFKYRDSSY------------------------------------- 1221
            L SW +      S +F  + SSY                                     
Sbjct: 1178 LASWKFKNSKADSSLFFLKTSSYIILVLIYVDDIIITGNNSAVMQTFINKLNQQFALKDL 1237

Query: 1222 ------------------------------------------------------------ 1232
                                                                        
Sbjct: 1238 GKLHYFLGIEVNRDATGMYLSQPKYIEELLKKMNMINLKACPTPMATGKVLSIEDGDSLR 1297

[Close]

BLAST of Lag0039869 vs. ExPASy TrEMBL
Match: A0A803QCY3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 7.9e-225
Identity = 516/1336 (38.62%), Postives = 696/1336 (52.10%), Query Frame = 0


Query: 5    TSTGNPAYVTGTTSFN------SPPLN-----QLLNQITTIKLDRGNFLLWKNLALPILR 64
            T+ GNP  VT   S N      +P L+       L Q  ++KLD  N+ LWK +   I+R
Sbjct: 3    TNAGNPT-VTAAVSTNTGARSTNPQLHVPHHFSTLKQPFSLKLDMNNYSLWKTMVSTIVR 62

Query: 65   SYKLEGHLSGASPCPEKFVQAASASVNPTTTEAGATSSGAVASEAAESTPARELNPLYES 124
             ++L+G L+G + CP ++V              G+T  G        S   + LNP +E+
Sbjct: 63   GHRLDGFLNGTNVCPSEYVY------------TGSTEDG--------SKTIKTLNPEFEN 122

Query: 125  WVAVDQLLLGWLYNSMTSEVATQVMGYENAQELWAAIQELFGVQSRAEEDYLRQVFQQSR 184
            W+  DQLL+GWLY+SMT  +AT+VMG  +A  LW A+++L+G  S+++ D  R + Q ++
Sbjct: 123  WIVNDQLLMGWLYSSMTETIATEVMGSTSAAGLWHALEQLYGAHSKSKMDDTRTLIQTTK 182

Query: 185  KGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLISQVLLGLDEEYNPVVAMIQDRAGISWS 244
            KG + M +YLR  K+ AD+L  AG P     L + VL  LD  Y  +V  I+ R   SW 
Sbjct: 183  KGGTPMIEYLRQKKSWADSLALAGEPYPEAQLATNVLSRLDINYLTLVLQIKARTKTSWQ 242

Query: 245  EMQAELLVFEKRLELQNNLKSSLSLSPGASVNMANSRDSGNQRNQSYGGRTNNGFGRGNQ 304
            E+Q  LL FE ++E                                 G   NN  GR   
Sbjct: 243  ELQELLLSFESKVE-------------------------------RLGRGNNNSRGRHFN 302

Query: 305  RGAGGRGRGRARGYGSFSNKPVCQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEGANRQ 364
            RG GGR RGR R   + ++KP CQVCGK  H+A++CY  F+  ++G              
Sbjct: 303  RGNGGRSRGRGR---TNNSKPTCQVCGKYDHSAVVCYNWFDDSYMG---------SDPHS 362

Query: 365  NNQNGQGQPAAFVANQNVNSCVAAPETVIDPNWYADSGASNHVTADYNNLANPVEYEGKE 424
            +NQN  GQ      N N ++ +A PE +    W+ADSGASN++TAD + +    EY GKE
Sbjct: 363  SNQNKTGQ-----NNNNPSAFIATPEFLDSEAWFADSGASNNITADPSVIPQKQEYGGKE 422

Query: 425  SVTIGDGNKLKIAFIGNSCLAAEHKNF-KLKKVLCVPSIAKNLVSVSKLAKDNEVFVEFH 484
             VT+G+G+KL I+  GN  L  +   + KL ++L VP IAKN +SVSKL  DN+V +EFH
Sbjct: 423  KVTVGNGDKLVISHFGNGKLYTKTGQWLKLNEMLLVPIIAKNFLSVSKLTTDNDVIIEFH 482

Query: 485  DGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTTDTNELPICNLVNSKDINNELSGFVL 544
               C VKD  T +VLL+G+L +GLY+      + T  N+                S ++ 
Sbjct: 483  SNSCFVKDIATRRVLLQGMLKDGLYQ------LQTPRNK----------------SAYLR 542

Query: 545  SSTLNVAISKAIWHKRLGHPSEEVLKSVVKSCNLPLSVNESFKFCEACQYGKSHALPFPN 604
             ST                      K +V  CN P +V+    FC+ACQYGKSH+LPF +
Sbjct: 543  FST---------------------SKFIVSDCN-PFTVDH---FCDACQYGKSHSLPFKH 602

Query: 605  STSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFIDDFSRFVWIYPLKRKNEALEAFVHF 664
            S S AL   DLVHTDLWGP+P+ S   FKYY+ F+DD +RF WIYPLK K+EA +AF+ F
Sbjct: 603  SNSKALKVLDLVHTDLWGPSPITSNQDFKYYVHFVDDCTRFTWIYPLKNKSEACDAFLAF 662

Query: 665  TALVKNQFNSSIKALQTDNGGEYVKIHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVE 724
             +L +NQF   IKAL+TD GGEY  +       G+    SCPHTS QNGRAERKHRH+VE
Sbjct: 663  KSLAENQFERKIKALRTDGGGEYQVLSDFVVTHGINFHHSCPHTSSQNGRAERKHRHIVE 722

Query: 725  TGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVLGGKSPMELLYGKKIDFQALRVFGSA 784
             GLTLLAQ+ MPLK+W DAF  AV LIN LP+ +L  K+P E+L+ K  D++ L+ FG A
Sbjct: 723  MGLTLLAQSIMPLKYWWDAFSTAVYLINRLPTPILDHKTPFEMLHKKIPDYKFLKTFGVA 782

Query: 785  CFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCLSSSGRLFISRHVRFNEEEFPFASGF 844
            CFPCLR YQAHKFQ+H+ KCV LG S  HKG+KCLS +GR++I R V FNE EFPF   F
Sbjct: 783  CFPCLRPYQAHKFQFHSIKCVNLGYSDAHKGYKCLSPTGRIYILRDVVFNELEFPFQISF 842

Query: 845  ------QQVVTTAASSSNVSPSIPLWFSNISGPDIKTTQQNREVPSTGVSPNECPPTTPS 904
                  + +V   +S+ +V PS+                     P+TG   +      PS
Sbjct: 843  LNNYQSENLVIIQSSTWSVLPSVS--------------------PATG---SRFTSANPS 902

Query: 905  NSSTDVQPLPAELSPQSSLMPTHEDSPPSQVEVA-----ENHCSASESSASTQSSN---L 964
            +SS + +P     +PQS          P+ V  A      N     E +A   +     +
Sbjct: 903  SSSQEAEP----STPQSRNFQNPNSREPTSVAEALAQKGWNKAMNEEIAALKTNKTYVLV 962

Query: 965  PPTPSTVQAGHPMVTRGKAGIFKPKLWLTHACTDWSVTEPTRIADALATPQWREAMDID- 1024
            PP PS    G+  V R K  +            D ++    R+   L    + + + ID 
Sbjct: 963  PPAPSQNLIGNKWVFREKFNL------------DGTL---QRLKARLVAKGFHQRLGIDF 1022

Query: 1025 -----PVVKASTIRVILSIAVTKGWQLRQLDFNNAFLNGRLDEDVYMRQPPGYEDAKCSN 1084
                 PV+KAST+R+IL+IAV+KGW +RQLD NNAFLNG L+EDV+M QP G+E+    +
Sbjct: 1023 GETYSPVIKASTVRIILAIAVSKGWDIRQLDINNAFLNGTLEEDVFMAQPEGFEEKGKEH 1082

Query: 1085 YVCKLDKAIYGLKQAPRAWNNT-------------------------------------- 1144
            +VCKL+K++YGLKQA RAW+ T                                      
Sbjct: 1083 FVCKLNKSLYGLKQALRAWDETGLFLTQTKYIEDLLKRTKFINLKSCPTPAIAGKPMSQN 1142

Query: 1145 -------------------------------------------------------LKATL 1204
                                                                   L  TL
Sbjct: 1143 DGEPLRDITTYKSIIGRLQYLCHTRPDIAYAVNKLNTDWACCPDDRKSVAGYCVYLGNTL 1178

Query: 1205 LSWGYSIIFKYRDSSYRSSNISALALASTEVIWLRQLMTEIGFPCCSKSVLWCDNVSAGA 1216
            +SW          SS   S   AL   S ++ W+  L+ EIGFP     V WCDN+ A A
Sbjct: 1203 VSWSSKKQHVVSRSS-TESEYRALPHVSAKISWIESLLKEIGFP-LKTVVTWCDNLGASA 1178

[Close]

BLAST of Lag0039869 vs. ExPASy TrEMBL
Match: A0A2Z6P4D5 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_412550 PE=4 SV=1)

HSP 1 Score: 789.6 bits (2038), Expect = 2.3e-224
Identity = 524/1496 (35.03%), Postives = 717/1496 (47.93%), Query Frame = 0


Query: 16   TTSFNSPPLNQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAA 75
            +++ NSP  N  L  I ++KLDR N+ LWK+L L ++R  KL+G++ G + CPE+FV +A
Sbjct: 2    SSAANSPKKND-LPSIISVKLDRDNYPLWKSLVLSLIRGCKLDGYILGTTECPEQFVTSA 61

Query: 76   SASVNPTTTEAGATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVAT 135
              S                          +++NP +  W+A DQ LLGWL NSM  ++AT
Sbjct: 62   DKS--------------------------KKVNPDFGDWIANDQALLGWLMNSMAIDIAT 121

Query: 136  QVMGYENAQELWAAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQ 195
            Q++  E +++LW   Q L G  +++   YL+  F  +RKG  KM +YL  MKN +D L  
Sbjct: 122  QLLHCETSKQLWDETQSLAGAHTKSRITYLKSEFHNTRKGEMKMEEYLIKMKNLSDKLKL 181

Query: 196  AGSPVNTRSLISQVLLGLDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSS 255
            AGSP++   L+ Q L GLD EYNPVV  + D+  +SW ++QA+LL FE RL+  NN  S 
Sbjct: 182  AGSPISNSDLMIQTLNGLDAEYNPVVVKLSDQINLSWVDVQAQLLAFESRLDQFNNF-SG 241

Query: 256  LSLSPGASVNMANSRD-SGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGYGSFSNKP 315
            L+L+  AS N AN  +  GN+ N            RGN R +  RG    RG G  SN  
Sbjct: 242  LTLN--ASANFANKTEFRGNKFN-----------SRGNWRRSNFRGMRGGRGKGRMSNTK 301

Query: 316  VCQVCGKTGHTALMCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSC 375
             CQVC  TGH A+ C  RF++ +           G N     + QG  +AF         
Sbjct: 302  -CQVCNGTGHIAVDCSYRFDRPYT----------GRNYSTEADKQGSHSAF--------- 361

Query: 376  VAAPETVIDPNWYADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLA 435
            +A+P    D  WY DSGA+NHVT   +      E+ GK S+ +G+G KLKI   G++ L 
Sbjct: 362  IASPYHGQDYEWYFDSGANNHVTHQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKL- 421

Query: 436  AEHKNFKLKKVLCVPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDE 495
                N  L  VL VP I KNL+SVSKL  DN + VEF    C VKDK TG+ LLKG L +
Sbjct: 422  ---NNLNLHDVLYVPQITKNLLSVSKLTADNNILVEFDANCCSVKDKLTGQTLLKGRLKD 481

Query: 496  GLYRFDGVKAVTTDTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSE 555
            GLY+          +N+ P C  ++ K+                      WH++LGHP+ 
Sbjct: 482  GLYQL---------SNKEP-CVYMSVKE---------------------SWHRKLGHPNN 541

Query: 556  EVLKSVVKSCNLPLSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAPL 615
            +VL  V+K CN+ +S ++ F FCEACQ+GK H LPF  S+SH  +   L+H+D+WGPAP+
Sbjct: 542  KVLDKVLKDCNVKISHSDQFSFCEACQFGKLHLLPFKPSSSHVQEPLALIHSDVWGPAPI 601

Query: 616  DSVNGFKYYILFIDDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGE 675
             S +GFKYY+ FIDDFSRF WI+PLK+K++ + AF+ F  L +NQFN  IK +Q D GGE
Sbjct: 602  LSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKKIKIIQCDGGGE 661

Query: 676  YVKIHQLCNEMGVKIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLV 735
            Y  + ++  E G++ R+SCP+TSQQNGRAERKHRHV E GLTLLAQA MPL++W +AF  
Sbjct: 662  YKAVQKVSIEAGIQFRMSCPYTSQQNGRAERKHRHVAELGLTLLAQAKMPLRYWWEAFST 721

Query: 736  AVLLINGLPSQVLGGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVY 795
            AV LIN LPS V   +SP  L++ ++ D+ AL+ FG AC+PCL+ Y  HK Q+HT +CV+
Sbjct: 722  AVYLINRLPSSVNPNESPYSLMFKREPDYNALKPFGCACYPCLKPYNQHKLQFHTTRCVF 781

Query: 796  LGPSPLHKGHKCLSSSGRLFISRHVRFNEEEFPFASGF----QQVVTTAASSSNVSPSIP 855
            +G S  HKG+KC++S GR+F+SRHV FNE  FPF  GF      + T   +SS + P+  
Sbjct: 782  VGYSNSHKGYKCINSHGRIFVSRHVIFNENHFPFHGGFLDTKNPLKTLTDNSSILLPTC- 841

Query: 856  LWFSNISGPDIKTTQQNREVPSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHE 915
                         T Q+   P    + ++    T S  S+D      ++      + T+ 
Sbjct: 842  ---------SAGATTQDAIEPDNNTTSDQ---NTHSIESSDNNENEEQVDSSEFFVNTNN 901

Query: 916  DSPPSQVEVAENHCSASESSASTQSSNLPPTPSTVQAG-HPMVTRGKAGIFKPKL-WLTH 975
             S  +Q   A+N   + + + ST +  +        +  H M TR K GI KPK+ ++  
Sbjct: 902  SS--TQDIEADNSVDSEDRNNSTMTGTIQQQAQQDNSNTHWMRTRSKDGIHKPKIPYVGM 961

Query: 976  ACTDWSVTEPTRIADALATPQWREAMD--------------------------------- 1035
            A TD    EP  + +AL  P W+EAMD                                 
Sbjct: 962  AETDSEEKEPKSVKEALGRPMWKEAMDKEYKALVSNHTWTLVPYQEQENIIDSKWIFKTK 1021

Query: 1036 ------------------------------IDPVVKASTIRVILSIAVTKGWQLRQLDFN 1095
                                            PVVK+ST+R+IL+IAV   W++RQLD N
Sbjct: 1022 YKSDGSIERRKARLVAKGFQQTAGLDFGETFSPVVKSSTVRIILTIAVHFNWEVRQLDIN 1081

Query: 1096 NAFLNGRLDEDVYMRQPPGYEDAKCSNYVCKLDKAIYGLKQAPRAWNNTLKATLLSWGY- 1155
            NAFLNG+L E V+M QP GY DA   N++CKL KAIYGLKQAPRAW ++L++TL++WG+ 
Sbjct: 1082 NAFLNGKLKETVFMHQPEGYIDAAKPNHICKLSKAIYGLKQAPRAWYDSLRSTLVNWGFQ 1141

Query: 1156 ------SIIF-------------------------------------------------- 1208
                  S+ F                                                  
Sbjct: 1142 NAKNDTSLFFLKGADHTTFLLIYVDDIIVTGSNIKFLEAFTNQLNTAYSLKDLGPLHYFL 1201

[Close]

BLAST of Lag0039869 vs. ExPASy TrEMBL
Match: A0A2K3MUJ9 (Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g017679 PE=4 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 3.4e-220
Identity = 463/1123 (41.23%), Postives = 618/1123 (55.03%), Query Frame = 0


Query: 28   LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASVNPTTTEAG 87
            L    ++KLDR NF LWK+L LP++R  K +G++ G   CP++FV     S++ T     
Sbjct: 12   LPSTVSVKLDRDNFPLWKSLVLPLIRGCKYDGYMLGTKKCPDQFV----TSIDNT----- 71

Query: 88   ATSSGAVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYENAQELW 147
                              ++NP Y+ W A DQ LLGWL NSMT ++ATQV+  E +++LW
Sbjct: 72   -----------------EKINPDYQDWQADDQALLGWLMNSMTVDIATQVLHCETSKQLW 131

Query: 148  AAIQELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLIS 207
               Q L G  +R+   YL+  F  + K   KM  YL  MKN AD L  AGSP+++  L+ 
Sbjct: 132  DEAQSLAGAHTRSRIIYLKSEFHNTHKREMKMEQYLAKMKNLADKLKLAGSPISSSDLMI 191

Query: 208  QVLLGLDEEYNPVVAMIQDRAGISWSEMQAELLVFEKRLELQNNLKSSLSLSPGASVNMA 267
            Q L GLD EYNPVV  + D+  ISW + QA+LL FE RL+  NN     +++  AS N A
Sbjct: 192  QTLNGLDSEYNPVVVKLSDQTNISWVDFQAQLLAFESRLDQLNNFN---NINLNASANFA 251

Query: 268  NSRDSGNQRNQSYGGRTNNGFGRGNQRGAGGRGRGRARGYGSFSNKPVCQVCGKTGHTAL 327
            +  +SG  +   +G R   G+   N RG  G GRGRAR   S   +P+CQ+CGK GHTA 
Sbjct: 252  SKNESGGNK---FGSR--GGWRGSNSRGMRG-GRGRAR--MSKPPRPICQICGKFGHTAA 311

Query: 328  MCYQRFNKEFVGPIYNQNRGEGANRQNNQNGQGQPAAFVANQNVNSCVAAPETVIDPNWY 387
             CY RF+K +              + +   G+G  +AF         VA+P    D  WY
Sbjct: 312  QCYYRFDKSY------------TEKNHYAEGEGSHSAF---------VASPYHGQDYEWY 371

Query: 388  ADSGASNHVTADYNNLANPVEYEGKESVTIGDGNKLKIAFIGNSCLAAEHKNFKLKKVLC 447
             DSGASNHVT     L +  E  GK S+ +G+G KLKI   G++ L     +  L+ VL 
Sbjct: 372  FDSGASNHVTHQSGQLQDLNENNGKNSLLVGNGEKLKILASGSTKL----NDVNLRNVLY 431

Query: 448  VPSIAKNLVSVSKLAKDNEVFVEFHDGFCLVKDKDTGKVLLKGVLDEGLYRFDGVKAVTT 507
            VP I KNL+SVSKL  DN   VEF + +C VKDK TGK LLKG L +GLY+    K   T
Sbjct: 432  VPEITKNLLSVSKLTIDNNALVEFDENYCYVKDKLTGKALLKGRLKDGLYQLSANKEPPT 491

Query: 508  DTNELPICNLVNSKDINNELSGFVLSSTLNVAISKAIWHKRLGHPSEEVLKSVVKSCNLP 567
            + +     +L                        K IWH++LGHP+ +VL+ V+K  N+ 
Sbjct: 492  NKDPCAYISL------------------------KEIWHRKLGHPNNKVLEKVLKDNNVK 551

Query: 568  LSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDLVHTDLWGPAPLDSVNGFKYYILFI 627
            +S ++ F FCEACQ+GK H LPF  S+SHA +  DL+HTD+WGPAP+ S + FKYY+ F+
Sbjct: 552  ISPSDKFTFCEACQFGKLHLLPFKTSSSHAKEPLDLIHTDVWGPAPILSQSNFKYYVHFL 611

Query: 628  DDFSRFVWIYPLKRKNEALEAFVHFTALVKNQFNSSIKALQTDNGGEYVKIHQLCNEMGV 687
            DDFSRF WI+PLK+K+E + AF  F  LV+NQFN  IK ++ D GGEY  + +   + G+
Sbjct: 612  DDFSRFTWIFPLKQKSETIHAFNQFKNLVENQFNKKIKVIRCDGGGEYKPVQKCAIDSGI 671

Query: 688  KIRLSCPHTSQQNGRAERKHRHVVETGLTLLAQASMPLKFWVDAFLVAVLLINGLPSQVL 747
            + ++SCP+TSQQNGRAERKHRHV E GLTLLAQA MPL +W +AF  AV LIN LPS V 
Sbjct: 672  QFQMSCPYTSQQNGRAERKHRHVTELGLTLLAQAKMPLSYWWEAFSTAVYLINRLPSSVN 731

Query: 748  GGKSPMELLYGKKIDFQALRVFGSACFPCLRKYQAHKFQYHTEKCVYLGPSPLHKGHKCL 807
              +SP  L++ K+ D+ AL+ FG AC+PCL+ Y  HK Q+HT +CV+LG S  HKG+KC+
Sbjct: 732  PNESPYTLVFKKEPDYTALKPFGCACYPCLKPYNQHKLQFHTTRCVFLGYSNSHKGYKCV 791

Query: 808  SSSGRLFISRHVRFNEEEFPFASGFQQVVTTAASSSNVSPSIPLWFSNISGPDIKTTQQN 867
            +S GR+F+SRHV FNE  FPF  GF   + T      V+   P+ F   S P   TT   
Sbjct: 792  NSHGRVFVSRHVVFNENHFPFQEGF---LDTRNPIKVVTNDTPIGFP--SFPAGITTNNT 851

Query: 868  REVPSTGVSPNECPPTTPSNSSTDVQPLPAELSPQSSLMPTHEDSPPSQVEVAENHCSAS 927
             E     V   E P     N+  D Q + ++    +              E A       
Sbjct: 852  AEATDNIVDQQE-PELNDINTVAD-QSVESDTFEHTDENNFSNGETEDSTEAAGRESMEE 911

Query: 928  ESSASTQSSNLPPTPSTVQAGHPMVTRGKAGIFKPKL---WLTHACTDWSVTEPTRIADA 987
             S   T+++  PP    +   H M TR KAG++KPKL    LT    +    EP  +++A
Sbjct: 912  ISQPITETN--PPPQQDITNTHWMRTRSKAGVYKPKLPYIGLTEEAKEGK--EPESVSEA 971

Query: 988  LATPQWREAMDID----------------------------------------------- 1047
            L+ P+W  AMD +                                               
Sbjct: 972  LSIPEWLNAMDAEYKALMNNKTWTLVPFEGQENVISSKWIFKTKYKADGTIERRKARLVA 1031

Query: 1048 ----------------PVVKASTIRVILSIAVTKGWQLRQLDFNNAFLNGRLDEDVYMRQ 1085
                            PVVK+ST+R+ILSIAV   W++RQLD NNAFLNG L E V+M Q
Sbjct: 1032 RGFQQTAGVDYDETFSPVVKSSTVRIILSIAVHLSWEVRQLDINNAFLNGNLKESVFMHQ 1037

[Close]

BLAST of Lag0039869 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 998  PVVKASTIRVILSIAVTKGWQLRQLDFNNAFLNGRLDEDVYMRQPPGYE----DAKCSNY 1057
            PV K +++++IL+I+    + L QLD +NAFLNG LDE++YM+ PPGY     D+   N 
Sbjct: 169  PVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNA 228

Query: 1058 VCKLDKAIYGLKQAPRAWNNTLKATLLSWGYSIIFKYRDSSY 1096
            VC L K+IYGLKQA R W      TL+ +G+  +  + D +Y
Sbjct: 229  VCYLKKSIYGLKQASRQWFLKFSVTLIGFGF--VQSHSDHTY 268

HSP 2 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 0


Query: 1058 DKAIYGLKQAPRAWNN---TLKATLLSWGYSIIFKYRDSSYRSSNISALALASTEVIWLR 1117
            D +    K   R+ N     L  +L+SW  S   +    S   +   AL+ A+ E++WL 
Sbjct: 447  DASFQSCKDTRRSTNGYCMFLGTSLISW-KSKKQQVVSKSSAEAEYRALSFATDEMMWLA 506

Query: 1118 QLMTEIGFPCCSKSVLWCDNVSAGALAANPVFHARTKHIEIDVHFVRDQ-VLQGKLEVRY 1177
            Q   E+  P    ++L+CDN +A  +A N VFH RTKHIE D H VR++ V Q  L   +
Sbjct: 507  QFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSF 566

Query: 1178 IPSNEQPADCLTKTLS---HSQFAYLRCKLGVAEL 1206
               +EQ  D  T+ LS        Y+    G+A L
Sbjct: 567  QAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGL 598

[Close]

BLAST of Lag0039869 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09
Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = 0


Query: 544 IWHKRLGHPSEEVLKSVVKSCNLPLSVNESFKFCEACQYGKSHALPFPNSTSHALDKFDL 603
           +WH RL H S+  ++ +VK   L  S   S KFCE C YGK+H + F        +  D 
Sbjct: 71  LWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDY 130

Query: 604 VHTDLWG 611
           VH+DLWG
Sbjct: 131 VHSDLWG 137

[Close]

BLAST of Lag0039869 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-06
Identity = 47/218 (21.56%), Postives = 85/218 (38.99%), Query Frame = 0


Query: 1319 PLNIKLSDSNYMLWKNQLLNHIIAFDMESFIDGTPPPVK-------------------YL 1378
            P+ + + +SNY  W+   L H ++FD+   IDGT  P                      L
Sbjct: 21   PVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLPTNANDVNWQKRDGIVKLSLYGTL 80

Query: 1379 DPTQTQ-------------------------LQKIRKDS---------LPVSQYLAQIKD 1438
             P Q Q                          + +R DS         + V+ Y  ++K 
Sbjct: 81   TPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDMRVADYYRKMKK 140

Query: 1439 ISDKFSAIDEPLSYRDHLAYILEGFGPEYNPFVTSIQNRTDRPSLVDVRSLLLAYDAKLE 1484
            ++D    +D P++ R+ + Y+L G  P+++  +  I++R   PS  D  ++L   + +L+
Sbjct: 141  LADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAATMLQEEEDRLK 200

[Close]

BLAST of Lag0039869 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 6.6e-06
Identity = 60/271 (22.14%), Postives = 118/271 (43.54%), Query Frame = 0


Query: 33  TIKLDRGNFLLWKNLALPILRSYKLEGHLSGASPCPEKFVQAASASVNPTTTEAGATSSG 92
           T+ L++ N+ +W+ L   +  S+ + GH+ G+S                           
Sbjct: 25  TLDLNKLNYDVWRELFETLCLSFGVLGHIDGSS--------------------------- 84

Query: 93  AVASEAAESTPARELNPLYESWVAVDQLLLGWLYNSMTSEVATQVMGYE-NAQELWAAIQ 152
                    TP  E     + W   D L+  W+Y ++T  +   ++     A++LW +++
Sbjct: 85  -------TPTPMTE-----KRWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLE 144

Query: 153 ELFGVQSRAEEDYLRQVFQQSRKGNSKMTDYLRIMKNHADNLGQAGSPVNTRSLISQVLL 212
            LF     A         + +   +  + +Y + +K+ +D L    SP++ R L+  +L 
Sbjct: 145 NLFRDNKEARALQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLN 204

Query: 213 GLDEEYNPVVAMIQDRAGI-SWSEMQAELLVFEKRLELQNNLKSSLSLSPGASVN---MA 272
           GL E+Y+ ++ +I+ ++   S++E ++ LL+ E R  L N  KSSLS +   S++     
Sbjct: 205 GLTEKYDYILNVIKHKSPFPSFTEARSMLLMEESR--LSNKSKSSLSHTNHPSLSNVLFT 254

Query: 273 NSRDSGNQRNQSYGGRTNNGFGRGNQRGAGG 299
             R       + +   +N G GR  ++  GG
Sbjct: 265 VPRQQERYPQEYHNNNSNMGRGRSKKKNRGG 254

The following BLAST results are available for this feature:

BLAST of Lag0039869 vs. NCBI nr


Match Name	E-value	Identity	Description
GAU19483.1	1.9e-241	36.79	hypothetical protein TSUD_77270 [Trifolium subterraneum]	[more]
GAU51268.1	4.8e-224	35.03	hypothetical protein TSUD_412550 [Trifolium subterraneum]	[more]
PNX94503.1	7.1e-220	41.23	putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense...	[more]
KYP50444.1	2.9e-213	42.73	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
PNY01489.1	4.3e-201	38.80	copia-like polyprotein, partial [Trifolium pratense]	[more]

BLAST of Lag0039869 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.4e-138	27.34	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.1e-135	26.71	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	4.7e-73	26.92	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	6.2e-41	21.98	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q12491	2.2e-22	26.98	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Lag0039869 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2Z6MBG6	9.3e-242	36.79	Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 ...	[more]
A0A803PM38	4.3e-239	37.24	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QCY3	7.9e-225	38.62	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2Z6P4D5	2.3e-224	35.03	Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 ...	[more]
A0A2K3MUJ9	3.4e-220	41.23	Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium prat...	[more]

BLAST of Lag0039869 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.2e-17	44.12	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00300.1	2.2e-09	41.79	Gag-Pol-related retrotransposon family protein	[more]
AT1G34070.1	2.3e-06	21.56	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]
AT5G48050.1	6.6e-06	22.14	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 602..696 e-value: 1.8E-12 score: 47.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 587..760 score: 22.68998
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 593..768 e-value: 7.0E-35 score: 122.1
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 1366..1445 e-value: 4.5E-7 score: 29.7 coord: 116..246 e-value: 3.5E-11 score: 43.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 860..949
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1209..1234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 860..911
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 918..948
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1209..1249
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 28..456 coord: 1320..1479
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1102..1189 e-value: 3.24969E-38 score: 137.985
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 542..585 e-value: 4.6E-13 score: 48.8
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 997..1084 e-value: 9.8E-26 score: 90.8
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 601..769
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 998..1158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039869.1	Lag0039869.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding