Lag0039855 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039855
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	60S ribosomal protein L17
Location	chr13: 427397 .. 430538 (+)
RNA-Seq Expression	Lag0039855
Synteny	Lag0039855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATATATATATTTTTCCAATAAATTTATTAAATGGCATAAAATAGTGCACAGAGGAAAGATGATAGTGGGCCATTTAAGCCCGGCCCAACATAAAGTCCCGTGGTCAAGATTAGGGTTTCCCTCTTTACTATAAGAAACTCGAAACTCGTCTTCACAGTTCTCTTGCTCGCAGGAGGGACTCAAGTTGGCAGCAGAAGCTGAAGAATTAGCATCCGCCGCCATGGTACCCTCCCCTCTTCTAGCGTTTCAATCTCCTTCTTCACCTCTTATTGTCTGTTCAATGCTCAAAATTCTACAATCTTAGCAAGTTTCTGATTCAGATTTATATGCATGTCCTGTTTTACAGGTTAAGTACTCAAGGGAGCCCGATAACCCCACCAAGTGTAAGTTTATTCTCCAATCCATATTCCCTTTTGTATCTCATTGGTTTTAGTTATGCAGTTCTTATGTGTTTCACTCTTTCTGAAGTTTCGGAGTTAGGTTAGAAGTACACAATCTAATACTTGTTTTTGATTTCTGTTCAGCCTGCAAAGCGCGAGGCTCCGACCTCAGAGTCCACTTCAAGGTAACATATTAGCACTAACTGCTTTCTCCTTTCACTGTTTTTCCCCATTGAAACCCGTCAATTCTACGCAAAATGTATGGGTTTTCAATACATTGCTCATTTTAATGCATACTACTGTGAAATCTCTTACTCTTAGAGTGCTGCCGTATTGTTTTGACAATTTGTTCACTGAGTTAGACAATTTGTAATTAATTTGTAGTTGTTAAATTTTGGATCAAGAGCAATGACATATATGAAATTGTTAACGTCGCACTAATCTAGTATGTTGTCGTGTATGTTATGATTATTTGAGACTGCCTGTAACAAACCTGATGAAAAAAGCAGGGCTCTGTTGCCTCTTTTGTGAATAGTGCTCTCGTAAACTTCAGGAAAACTGAATGTATCATTATTGGGTGAACCTGTGTATAGATAATTGCTTAAGGTTCAGTAAATGATGCTACATAATGTATGTAGCTTCTTGTAACAATATATATTTGGTTGATAATGTTTGGATCGTGCTTATAAGATTTATAATTTTGCACTATGTAACTTTGTATGGATAGTGTGGTGATCATCTGAGATTGCCTGTAACATACCTGATGAAAAAAGCAGGGCTCTGTTGCCTCTTTGTGAATAGTGCTCTTGTAAACTTCAGGAAAACTGAAGGAATCATTATTGGGTGAACCTCTGTACAATTAATTGCTGAAGGTTCAGTAAATGATGCTACATAAGCTTTGTAGCTTCTTGTCATAGTGGATATTTGGTTGATAGTTTTTGGATTGTAAGATTTATAATTTTCCACTTAATGTAATTTTTTATATCGTGAATGTGGTGATTATCTGAGACTGCCTGTACCCAACCTGATGAAAAAAGCAGGGCTCTGTTGCCTGTTTTGTGAATAGTGCTCTCGTAAACTTCAGGAAAAATGAATGTATTGTTATTGGGTGAACCTCTGTAAATATAATTGCCGAAGGTTCAGTAAATGATGCAACATACTCTCTATAGCATTTTTCATTATACAAAGAGAGGTTGATGGTCCTTGGAGCCTCAAACTTTTATTGCAGATTGGCCTCTTTTTTGTTTGACTCAGGGTAAATGTTAAATGAATTCTATTTTAGAACTATTTATTAGTAAATACAACTCAATTCTACATAATATGTAGAAACTGTTGAATTTTTACTGCATTTAAGAATGATTTTCTGAAACTGGCCTTGTTTGTAACCTGATGAAAAAAGCAGGGCTTTGTTGCCTCTCGTGAATAAGGCTCTCGTAAACTTCAGGGAAACTAAGTGCATTGTTATTGGGTGAACCTCTGTAGAGATGGTTGCTGAAGGTTCAGTAAATGATGCTACATTTGTAAAATAGCACATTGATCTTAAAGGTGATATATAAAATAAGTGAATCAAGAGAGACTTTTGTATATGGAGCATTGCATTTTTATTACTGATGATGTACATAAGTTAATGGTATTGTTTTATGTTTTCCAACTCTTTGGTTAACAATATTGCCTCCACTATATACCAAATACACCATTATGCTTCACTTACTTGCAATTATAAGAGTTGTCTTGATTATTTAACCTGATGAAAAAAGCAGGGCTCTGTTGCCTTTTATGAATGGTGGCTCTTGTTAAATTCAGGGAAACTGAATGCATTGTTATTGGGTGAACCTCTGTAAAACTAGTTGCTAAAGGTTCAGTAAATGATGTTACAGGAAAATTATATAGATTATAAAAATTCAGTCTCTGGCATTTGAAATTATATTGCAATTTTTTTGGTAATTTCAAAGGTTTCACATATAGTAATTCCTTTACATTTTTAACTTATTGTATCCATCATCAATTTTTGTGTCTTTAGAATACGAGAGAGACTGCTCATGCCCTCAGAAAGTTGCCCTTGGCCAAGGCAAAAAGGTACTTGGAGGATGTTCTCGCCCACAAGCAAGCTATTCCATTCCGACGTTTCTGTGGAGGTGTTGGACGAACTGCTCAGGCCAAAAATAGGCACTCAAATGGACAAGGTCGCTGGCCAGTTAAATCTGCAAAATTTATTCTAGATCTTCTTAAGAATGCTGAGAGCAACGCCGAAGTATGTATTGCCATCCCTACAAGTTACGTATTGGCCCTTCTGTTTTTTTTTTTCTCTTTGATTCTGACAATGGTAAATCTTCATTCAGGTGAAAGGACTGGACGTTGATTCTCTCATTGTATCCCACATTCAGGTGAATCAAGCTCAGAAGCAAAGGCGTCGTACATACCGTGCTCACGGAAGAATTAACCGTGAGTTTCTCAAAATCTATTCTACTCTTTACTGTTTCTGGTTAGATCATTACTTAAATTATGAATTTGATGTTTTGTTTTGCAGCCTATATGTCATCTCCATGCCACATTGAGCTTATTTTGTCAGAGAAGGAAGAACCCGTCAAGAAAGAGGTAAATTCAAGATTGTAAAATTTGATGGGTATATTATATTTGTTTATATGGTTTAGGGCTTCTTCTTGAATCCTTTTCTTTTTCTGGTGACAGCCTGAGACCCAGTTGGCAACGAGTAAAACCAAGAAAGGTCAAGCTCTCCGCAGTGGTGCTTCATCTTGA

mRNA sequence

ATGGAGGGACTCAAGTTGGCAGCAGAAGCTGAAGAATTAGCATCCGCCGCCATGGTACCCTCCCCTCTTCTAGCGTTTCAATCTCCTTCTTCACCTCTTATTGTTAAGTACTCAAGGGAGCCCGATAACCCCACCAAGTCCTGCAAAGCGCGAGGCTCCGACCTCAGAGTCCACTTCAAGAATACGAGAGAGACTGCTCATGCCCTCAGAAAGTTGCCCTTGGCCAAGGCAAAAAGGTACTTGGAGGATGTTCTCGCCCACAAGCAAGCTATTCCATTCCGACGTTTCTGTGGAGGTGTTGGACGAACTGCTCAGGCCAAAAATAGGCACTCAAATGGACAAGGTCGCTGGCCAGTTAAATCTGCAAAATTTATTCTAGATCTTCTTAAGAATGCTGAGAGCAACGCCGAAGTGAAAGGACTGGACGTTGATTCTCTCATTGTATCCCACATTCAGGTGAATCAAGCTCAGAAGCAAAGGCGTCGTACATACCGTGCTCACGGAAGAATTAACCCCTATATGTCATCTCCATGCCACATTGAGCTTATTTTGTCAGAGAAGGAAGAACCCGTCAAGAAAGAGCCTGAGACCCAGTTGGCAACGAGTAAAACCAAGAAAGGTCAAGCTCTCCGCAGTGGTGCTTCATCTTGA

Coding sequence (CDS)

ATGGAGGGACTCAAGTTGGCAGCAGAAGCTGAAGAATTAGCATCCGCCGCCATGGTACCCTCCCCTCTTCTAGCGTTTCAATCTCCTTCTTCACCTCTTATTGTTAAGTACTCAAGGGAGCCCGATAACCCCACCAAGTCCTGCAAAGCGCGAGGCTCCGACCTCAGAGTCCACTTCAAGAATACGAGAGAGACTGCTCATGCCCTCAGAAAGTTGCCCTTGGCCAAGGCAAAAAGGTACTTGGAGGATGTTCTCGCCCACAAGCAAGCTATTCCATTCCGACGTTTCTGTGGAGGTGTTGGACGAACTGCTCAGGCCAAAAATAGGCACTCAAATGGACAAGGTCGCTGGCCAGTTAAATCTGCAAAATTTATTCTAGATCTTCTTAAGAATGCTGAGAGCAACGCCGAAGTGAAAGGACTGGACGTTGATTCTCTCATTGTATCCCACATTCAGGTGAATCAAGCTCAGAAGCAAAGGCGTCGTACATACCGTGCTCACGGAAGAATTAACCCCTATATGTCATCTCCATGCCACATTGAGCTTATTTTGTCAGAGAAGGAAGAACCCGTCAAGAAAGAGCCTGAGACCCAGTTGGCAACGAGTAAAACCAAGAAAGGTCAAGCTCTCCGCAGTGGTGCTTCATCTTGA

Protein sequence

MEGLKLAAEAEELASAAMVPSPLLAFQSPSSPLIVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSGASS

Homology

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BLAST of Lag0039855 vs. NCBI nr
Match: XP_008446047.1 (PREDICTED: 60S ribosomal protein L17-2 [Cucumis melo] >XP_011655562.1 60S ribosomal protein L17-2 [Cucumis sativus] >KAA0034200.1 60S ribosomal protein L17-2 [Cucumis melo var. makuwa] >KGN51678.1 hypothetical protein Csa_007731 [Cucumis sativus] >TYK15720.1 60S ribosomal protein L17-2 [Cucumis melo var. makuwa])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK+KK QALRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKSQALRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. NCBI nr
Match: XP_022945920.1 (60S ribosomal protein L17-2 [Cucurbita moschata] >XP_022966986.1 60S ribosomal protein L17-2-like [Cucurbita maxima] >XP_023541703.1 60S ribosomal protein L17-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.1 bits (910), Expect = 4.2e-94
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK+KKGQALRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

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BLAST of Lag0039855 vs. NCBI nr
Match: XP_038891549.1 (60S ribosomal protein L17-2 [Benincasa hispida])

HSP 1 Score: 354.0 bits (907), Expect = 9.3e-94
Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPE QLATSK KK QALRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPEIQLATSKAKKSQALRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. NCBI nr
Match: XP_022151946.1 (60S ribosomal protein L17-2 [Momordica charantia])

HSP 1 Score: 350.5 bits (898), Expect = 1.0e-92
Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNSTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLI+SHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIISHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA SK K+GQ LRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLAASKAKRGQVLRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. NCBI nr
Match: XP_038885177.1 (60S ribosomal protein L17-2-like [Benincasa hispida])

HSP 1 Score: 350.1 bits (897), Expect = 1.3e-92
Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDNPTKSCKARGSDLRVHFKNTRETAHA+RKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVD L VSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLAT K KKGQA+RSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. ExPASy Swiss-Prot
Match: P51413 (60S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2)

HSP 1 Score: 312.4 bits (799), Expect = 4.0e-84
Identity = 155/176 (88.07%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYS+EPDN TKSCKARGSDLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQA 210
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA +K+KK  A
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKSAA 175

[Close]

BLAST of Lag0039855 vs. ExPASy Swiss-Prot
Match: Q93VI3 (60S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 6.9e-84
Identity = 154/174 (88.51%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYS+EPDN TKSCKARG+DLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKG 208
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA +K+KKG
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKG 173

[Close]

BLAST of Lag0039855 vs. ExPASy Swiss-Prot
Match: O48557 (60S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.5e-80
Identity = 148/170 (87.06%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYS+EP NPTKS KA G DLRVHFKNTRETA ALRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RR+CGGVGRTAQAK+RHSNGQGRWPVKSA+FILDLLKNAESNA+VKGLDVD+L VSHIQV
Sbjct: 61  RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK 204
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKE +  +A  K
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 170

[Close]

BLAST of Lag0039855 vs. ExPASy Swiss-Prot
Match: P35266 (60S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.7e-77
Identity = 142/167 (85.03%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYS +P NPTKS KA G DLRVHFKNTRETA ALRK+PL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RR+C GVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAESNAEVKGLDVD+L +SHIQV
Sbjct: 61  RRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESNAEVKGLDVDALYISHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA 201
           NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE E+ +A
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIA 167

[Close]

BLAST of Lag0039855 vs. ExPASy Swiss-Prot
Match: P35267 (60S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.2e-77
Identity = 141/170 (82.94%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSR+P NPTKS KA G DLRVHFKNTRETA ALR++PL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSRDPSNPTKSAKACGKDLRVHFKNTRETAFALRRMPLGKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RR+C GVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQV
Sbjct: 61  RRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDNLYISHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK 204
           NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE +  +A  K
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRK 170

[Close]

BLAST of Lag0039855 vs. ExPASy TrEMBL
Match: A0A5A7STA3 (60S ribosomal protein L17-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002190 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.9e-95
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK+KK QALRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKSQALRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. ExPASy TrEMBL
Match: A0A0A0KPZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589950 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.9e-95
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK+KK QALRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKSQALRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. ExPASy TrEMBL
Match: A0A1S3BDN4 (60S ribosomal protein L17-2 OS=Cucumis melo OX=3656 GN=LOC103488896 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.9e-95
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK+KK QALRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKSQALRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. ExPASy TrEMBL
Match: A0A6J1HQT9 (60S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111466530 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.0e-94
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK+KKGQALRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. ExPASy TrEMBL
Match: A0A6J1G2C7 (60S ribosomal protein L17-2 OS=Cucurbita moschata OX=3662 GN=LOC111450019 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.0e-94
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQALRSG 213
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK+KKGQALRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSG 180

Query: 214 ASS 217
           ASS
Sbjct: 181 ASS 183

[Close]

BLAST of Lag0039855 vs. TAIR 10
Match: AT1G67430.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 312.4 bits (799), Expect = 2.9e-85
Identity = 155/176 (88.07%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYS+EPDN TKSCKARGSDLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQA 210
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA +K+KK  A
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKSAA 175

[Close]

BLAST of Lag0039855 vs. TAIR 10
Match: AT1G27400.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 311.6 bits (797), Expect = 4.9e-85
Identity = 154/174 (88.51%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYS+EPDN TKSCKARG+DLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD+L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKG 208
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA +K+KKG
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKG 173

[Close]

BLAST of Lag0039855 vs. TAIR 10
Match: AT1G67430.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 209.5 bits (532), Expect = 2.6e-54
Identity = 116/176 (65.91%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 34  IVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 93
           +VKYS+EPDN TKSCKARGSDLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 94  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQV 153
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNA                 
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNA----------------- 120

Query: 154 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKTKKGQA 210
                                      ELILSEKEEPVKKEPETQLA +K+KK  A
Sbjct: 121 ---------------------------ELILSEKEEPVKKEPETQLA-AKSKKSAA 131

The following BLAST results are available for this feature:

BLAST of Lag0039855 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446047.1	1.4e-94	98.36	PREDICTED: 60S ribosomal protein L17-2 [Cucumis melo] >XP_011655562.1 60S riboso...	[more]
XP_022945920.1	4.2e-94	98.36	60S ribosomal protein L17-2 [Cucurbita moschata] >XP_022966986.1 60S ribosomal p...	[more]
XP_038891549.1	9.3e-94	97.81	60S ribosomal protein L17-2 [Benincasa hispida]	[more]
XP_022151946.1	1.0e-92	96.17	60S ribosomal protein L17-2 [Momordica charantia]	[more]
XP_038885177.1	1.3e-92	96.17	60S ribosomal protein L17-2-like [Benincasa hispida]	[more]

BLAST of Lag0039855 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51413	4.0e-84	88.07	60S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2	[more]
Q93VI3	6.9e-84	88.51	60S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1	[more]
O48557	3.5e-80	87.06	60S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1	[more]
P35266	3.7e-77	85.03	60S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35267	8.2e-77	82.94	60S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]

BLAST of Lag0039855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7STA3	6.9e-95	98.36	60S ribosomal protein L17-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0KPZ4	6.9e-95	98.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589950 PE=3 SV=1	[more]
A0A1S3BDN4	6.9e-95	98.36	60S ribosomal protein L17-2 OS=Cucumis melo OX=3656 GN=LOC103488896 PE=3 SV=1	[more]
A0A6J1HQT9	2.0e-94	98.36	60S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111466530 PE=...	[more]
A0A6J1G2C7	2.0e-94	98.36	60S ribosomal protein L17-2 OS=Cucurbita moschata OX=3662 GN=LOC111450019 PE=3 S...	[more]

BLAST of Lag0039855 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67430.1	2.9e-85	88.07	Ribosomal protein L22p/L17e family protein	[more]
AT1G27400.1	4.9e-85	88.51	Ribosomal protein L22p/L17e family protein	[more]
AT1G67430.2	2.6e-54	65.91	Ribosomal protein L22p/L17e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 50..185 e-value: 3.9E-39 score: 133.1
IPR001063	Ribosomal protein L22/L17	CDD	cd00336	Ribosomal_L22	coord: 48..184 e-value: 2.56018E-37 score: 124.14
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	TIGRFAM	TIGR01038	TIGR01038	coord: 37..187 e-value: 1.2E-60 score: 201.7
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	PANTHER	PTHR11593	60S RIBOSOMAL PROTEIN L17	coord: 34..216
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	HAMAP	MF_01331_A	Ribosomal_L22_A	coord: 33..187 score: 24.528027
IPR036394	Ribosomal protein L22/L17 superfamily	GENE3D	3.90.470.10	Ribosomal protein L22/L17	coord: 34..215 e-value: 6.3E-77 score: 259.4
IPR036394	Ribosomal protein L22/L17 superfamily	SUPERFAMILY	54843	Ribosomal protein L22	coord: 35..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..216
None	No IPR available	PANTHER	PTHR11593:SF35	60S RIBOSOMAL PROTEIN L17-2-LIKE	coord: 34..216
IPR018260	Ribosomal protein L22/L17, conserved site	PROSITE	PS00464	RIBOSOMAL_L22	coord: 160..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039855.1	Lag0039855.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome