Lag0039834 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039834
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	U5 small nuclear ribonucleoprotein 40 kDa protein
Location	chr13: 306157 .. 307191 (+)
RNA-Seq Expression	Lag0039834
Synteny	Lag0039834

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCCCCTTCAGAAGGAGAAAATGCTTTGGCTACAGTTGGTCCGCGTCCAATGGAGTGGTCCACCGTTCCATATCATGCGCCTCAAGGACCTGGGCCAAATGGGAAACAACGAACATCAAGTCTGGAATCACCGATCATGTTGTTGACAGGCCATCAAAGTGCAATATATACATTAAAGTTTAATCCAGCTGGAGATGTGATTGCATCTGGGTCTCATGACAAGGAGATTTTCCTGTGGAACGTACATGGAGATTGCAAGAACTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTCGATCTTCATTGGACTACTGATGGATCTCAGATAGTTAGTGCCAGCCCCGATAAAACGCTGAGAGCATGGGATGTCGAGACTGGAAAACAAGTTAAGAAGATGGCAGAGCACTCCTCCTTTGTCAATTCATGTTGTCCCACGAGAAGAGGGCCACCACTAATTGTCAGTGGATCCGACGATGGAACTGCGAAACTTTGGGATATGCGTCAAAGGGGTGCCATTCAAACTTTTCCAGATAAATATCAGATTACAGCAGTAAGTTTCTCGGATGCATCAGATAAGATCTTCACAGGTGGAATCGACAACGATGTTAAGGTCTGGGATTTGCGCAAAGGTGAAGTGATGATGACTCTTCAAGGCCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCCTATCTCCTCACTAATGGAATGGACTGCAAGCTCTGCATATGGGACATGCGCCCATATGCGCCCCAAAACCGATGTGTCAAGATATTTGAAGGGCACCAACATAACTTCGAAAAGAACCTACTGAAATGTAGTTGGTCTCCGGACGGTAGCAAGGTCACTGCAGGCAGTTCAGATCGGATGGTTTACGTATGGGATACAACCTCTCGACGAATCTTGTTTAAGCTTCCTGGCCATACCGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTGTTGGATCTTGCAGTAGTGATAAACAGATATATCTTGGGGAGATTTAA

mRNA sequence

ATGCAAGCCCCTTCAGAAGGAGAAAATGCTTTGGCTACAGTTGGTCCGCGTCCAATGGAGTGGTCCACCGTTCCATATCATGCGCCTCAAGGACCTGGGCCAAATGGGAAACAACGAACATCAAGTCTGGAATCACCGATCATGTTGTTGACAGGCCATCAAAGTGCAATATATACATTAAAGTTTAATCCAGCTGGAGATGTGATTGCATCTGGGTCTCATGACAAGGAGATTTTCCTGTGGAACGTACATGGAGATTGCAAGAACTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTCGATCTTCATTGGACTACTGATGGATCTCAGATAGTTAGTGCCAGCCCCGATAAAACGCTGAGAGCATGGGATGTCGAGACTGGAAAACAAGTTAAGAAGATGGCAGAGCACTCCTCCTTTGTCAATTCATGTTGTCCCACGAGAAGAGGGCCACCACTAATTGTCAGTGGATCCGACGATGGAACTGCGAAACTTTGGGATATGCGTCAAAGGGGTGCCATTCAAACTTTTCCAGATAAATATCAGATTACAGCAGTAAGTTTCTCGGATGCATCAGATAAGATCTTCACAGGTGGAATCGACAACGATGTTAAGGTCTGGGATTTGCGCAAAGGTGAAGTGATGATGACTCTTCAAGGCCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCCTATCTCCTCACTAATGGAATGGACTGCAAGCTCTGCATATGGGACATGCGCCCATATGCGCCCCAAAACCGATGTGTCAAGATATTTGAAGGGCACCAACATAACTTCGAAAAGAACCTACTGAAATGTAGTTGGTCTCCGGACGGTAGCAAGGTCACTGCAGGCAGTTCAGATCGGATGGTTTACGTATGGGATACAACCTCTCGACGAATCTTGTTTAAGCTTCCTGGCCATACCGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTGTTGGATCTTGCAGTAGTGATAAACAGATATATCTTGGGGAGATTTAA

Coding sequence (CDS)

ATGCAAGCCCCTTCAGAAGGAGAAAATGCTTTGGCTACAGTTGGTCCGCGTCCAATGGAGTGGTCCACCGTTCCATATCATGCGCCTCAAGGACCTGGGCCAAATGGGAAACAACGAACATCAAGTCTGGAATCACCGATCATGTTGTTGACAGGCCATCAAAGTGCAATATATACATTAAAGTTTAATCCAGCTGGAGATGTGATTGCATCTGGGTCTCATGACAAGGAGATTTTCCTGTGGAACGTACATGGAGATTGCAAGAACTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTCGATCTTCATTGGACTACTGATGGATCTCAGATAGTTAGTGCCAGCCCCGATAAAACGCTGAGAGCATGGGATGTCGAGACTGGAAAACAAGTTAAGAAGATGGCAGAGCACTCCTCCTTTGTCAATTCATGTTGTCCCACGAGAAGAGGGCCACCACTAATTGTCAGTGGATCCGACGATGGAACTGCGAAACTTTGGGATATGCGTCAAAGGGGTGCCATTCAAACTTTTCCAGATAAATATCAGATTACAGCAGTAAGTTTCTCGGATGCATCAGATAAGATCTTCACAGGTGGAATCGACAACGATGTTAAGGTCTGGGATTTGCGCAAAGGTGAAGTGATGATGACTCTTCAAGGCCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCCTATCTCCTCACTAATGGAATGGACTGCAAGCTCTGCATATGGGACATGCGCCCATATGCGCCCCAAAACCGATGTGTCAAGATATTTGAAGGGCACCAACATAACTTCGAAAAGAACCTACTGAAATGTAGTTGGTCTCCGGACGGTAGCAAGGTCACTGCAGGCAGTTCAGATCGGATGGTTTACGTATGGGATACAACCTCTCGACGAATCTTGTTTAAGCTTCCTGGCCATACCGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTGTTGGATCTTGCAGTAGTGATAAACAGATATATCTTGGGGAGATTTAA

Protein sequence

MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI

Homology

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BLAST of Lag0039834 vs. NCBI nr
Match: XP_022945717.1 (U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] >KAG6573599.1 U5 small nuclear ribonucleoprotein 40 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012682.1 U5 small nuclear ribonucleoprotein 40 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 724.2 bits (1868), Expect = 5.4e-205
Identity = 337/344 (97.97%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60
           MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60

Query: 61  KFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120
           KFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 301 DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]

BLAST of Lag0039834 vs. NCBI nr
Match: XP_023542336.1 (U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 722.6 bits (1864), Expect = 1.6e-204
Identity = 336/344 (97.67%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60
           MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60

Query: 61  KFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120
           KFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVM+TLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMITLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 301 DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]

BLAST of Lag0039834 vs. NCBI nr
Match: XP_022966914.1 (U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima])

HSP 1 Score: 722.2 bits (1863), Expect = 2.1e-204
Identity = 336/344 (97.67%), Postives = 340/344 (98.84%), Query Frame = 0


Query: 1   MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60
           MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLL GHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLAGHQSAIYTL 60

Query: 61  KFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120
           KFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 301 DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

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BLAST of Lag0039834 vs. NCBI nr
Match: XP_008446018.1 (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] >KAA0034179.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo var. makuwa] >TYK15740.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 714.9 bits (1844), Expect = 3.3e-202
Identity = 332/344 (96.51%), Postives = 338/344 (98.26%), Query Frame = 0


Query: 1   MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60
           MQ PSEGENALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 61  KFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120
           KFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWT DGSQIVSASPDKT
Sbjct: 61  KFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 301 DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           DTTSRRIL+KLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI 344

[Close]

BLAST of Lag0039834 vs. NCBI nr
Match: XP_022151978.1 (U5 small nuclear ribonucleoprotein 40 kDa protein [Momordica charantia])

HSP 1 Score: 714.5 bits (1843), Expect = 4.3e-202
Identity = 334/341 (97.95%), Postives = 336/341 (98.53%), Query Frame = 0


Query: 4   PSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFN 63
           PSEG NALATVGPRPMEWSTVPY APQGPGPNGKQRTSSLES IMLLTGHQSAIYTLKFN
Sbjct: 5   PSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESSIMLLTGHQSAIYTLKFN 64

Query: 64  PAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRA 123
           PAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDG QIV+ASPDKTLRA
Sbjct: 65  PAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRA 124

Query: 124 WDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ 183
           WDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ
Sbjct: 125 WDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ 184

Query: 184 ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM 243
           ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Sbjct: 185 ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM 244

Query: 244 DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT 303
           DCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT
Sbjct: 245 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT 304

Query: 304 SRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           SRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Sbjct: 305 SRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345

[Close]

BLAST of Lag0039834 vs. ExPASy Swiss-Prot
Match: Q96DI7 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP40 PE=1 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 6.4e-124
Identity = 190/309 (61.49%), Postives = 248/309 (80.26%), Query Frame = 0


Query: 36  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRG 95
           G  R SSL++PIMLL+GH+  +Y  KF+P G  +AS   D+ I LWNV+GDC N+  L+G
Sbjct: 48  GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG 107

Query: 96  HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLI 155
           H  AV++LH+ TDGS + SAS DKT+  WD ETG++VK++  H+SFVNSC P RRGP L+
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167

Query: 156 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV 215
            +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 227

Query: 216 MMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKN 275
             T++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKN
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN 287

Query: 276 LLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS 335
           LL+CSWSPDGSK+ AGS+DR VYVWDTTSRRIL+KLPGH GS+NE  FHP EPI+ S SS
Sbjct: 288 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASS 347

Query: 336 DKQIYLGEI 345
           DK++Y+GEI
Sbjct: 348 DKRLYMGEI 356

[Close]

BLAST of Lag0039834 vs. ExPASy Swiss-Prot
Match: Q6PE01 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-123
Identity = 188/309 (60.84%), Postives = 248/309 (80.26%), Query Frame = 0


Query: 36  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRG 95
           G  R SSL++PIMLL+GH+  +Y  KF+P G  +AS   D+ I LWNV+GDC N+  L+G
Sbjct: 49  GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG 108

Query: 96  HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLI 155
           H  AV++LH+ TDGS + SAS DKT+  WD ETG++VK++  H+SFVNSC P RRGP L+
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168

Query: 156 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV 215
            +GSDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 169 CTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228

Query: 216 MMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKN 275
             T++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKN
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN 288

Query: 276 LLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS 335
           LL+CSWSPDGSK+ AGS+DR VYVWDTTSRR+L+KLPGH GS+NE  FHP EPI+ S SS
Sbjct: 289 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASS 348

Query: 336 DKQIYLGEI 345
           DK++Y+GEI
Sbjct: 349 DKRLYMGEI 357

[Close]

BLAST of Lag0039834 vs. ExPASy Swiss-Prot
Match: Q2HJH6 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus OX=9913 GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.4e-123
Identity = 189/309 (61.17%), Postives = 248/309 (80.26%), Query Frame = 0


Query: 36  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRG 95
           G  R SSL++PIMLL+GH+  +Y  KF+P G  +AS   D+ I LWNV+GDC N+  L+G
Sbjct: 49  GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG 108

Query: 96  HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLI 155
           H  AV++LH+ TDGS + SAS DKT+  WD ETG++VK++  H+SFVNSC P RRGP L+
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168

Query: 156 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV 215
            +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228

Query: 216 MMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKN 275
             T++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCV+IF+G+ HNFEKN
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKN 288

Query: 276 LLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS 335
           LL+CSWSPDGSK+ AGS+DR VYVWDTTSRRIL+KLPGH GS+NE  FHP EPI+ S SS
Sbjct: 289 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASS 348

Query: 336 DKQIYLGEI 345
           DK++Y+GEI
Sbjct: 349 DKRLYMGEI 357

[Close]

BLAST of Lag0039834 vs. ExPASy Swiss-Prot
Match: Q5RF51 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii OX=9601 GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 6.0e-122
Identity = 188/309 (60.84%), Postives = 247/309 (79.94%), Query Frame = 0


Query: 36  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRG 95
           G  R SSL++PIMLL+GH+  +Y  KF+P G  +AS   D+ I LWNV+GDC N+  L+G
Sbjct: 48  GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCGNYATLKG 107

Query: 96  HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLI 155
           +  AV++LH+ TDGS + SAS DKT+  WD ETG++VK++  H+SFVNSC P RRGP L+
Sbjct: 108 YSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167

Query: 156 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV 215
            +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 227

Query: 216 MMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKN 275
             T++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKN
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN 287

Query: 276 LLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS 335
           LL+CSWSPDGSK+ AGS+DR V VWDTTSRRIL+KLPGH GS+NE  FHP EPI+ S SS
Sbjct: 288 LLRCSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASS 347

Query: 336 DKQIYLGEI 345
           DK++Y+GEI
Sbjct: 348 DKRLYMGEI 356

[Close]

BLAST of Lag0039834 vs. ExPASy Swiss-Prot
Match: Q55AR8 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum OX=44689 GN=snrnp40 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.6e-111
Identity = 176/310 (56.77%), Postives = 230/310 (74.19%), Query Frame = 0


Query: 36  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRG 95
           G +RTS LE PIM L GH+  IY+ KFN  G  +ASG  DKEIFLWNV+G+C N+ VL+G
Sbjct: 44  GTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKG 103

Query: 96  HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLI 155
           HK  +L+LHW+TD ++I +A  DK++  WD   G+ +K++ EHS  VNSCCP RRGPPL+
Sbjct: 104 HKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLV 163

Query: 156 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE- 215
            SGSDD +A+++D R +G+   F  KY +T+V FSDASD++ TGGIDN ++VWD+R  E 
Sbjct: 164 ASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQED 223

Query: 216 VMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEK 275
            + TL  HQD IT   +S DG+YLL+N MD    IWD+RPYAP NR +K F G Q+NFEK
Sbjct: 224 PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEK 283

Query: 276 NLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCS 335
           NL+K SWS DG ++  GSSDR VY+WDT ++++ + LPGH+G+VNE  FHP+EPI+ SCS
Sbjct: 284 NLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCS 343

Query: 336 SDKQIYLGEI 345
           SDK IYLGEI
Sbjct: 344 SDKTIYLGEI 353

[Close]

BLAST of Lag0039834 vs. ExPASy TrEMBL
Match: A0A6J1G1Q0 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111449859 PE=4 SV=1)

HSP 1 Score: 724.2 bits (1868), Expect = 2.6e-205
Identity = 337/344 (97.97%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60
           MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60

Query: 61  KFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120
           KFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 301 DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]

BLAST of Lag0039834 vs. ExPASy TrEMBL
Match: A0A6J1HV60 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111466479 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.0e-204
Identity = 336/344 (97.67%), Postives = 340/344 (98.84%), Query Frame = 0


Query: 1   MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60
           MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLL GHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLAGHQSAIYTL 60

Query: 61  KFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120
           KFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 301 DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]

BLAST of Lag0039834 vs. ExPASy TrEMBL
Match: A0A5A7SYI1 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002400 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.6e-202
Identity = 332/344 (96.51%), Postives = 338/344 (98.26%), Query Frame = 0


Query: 1   MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60
           MQ PSEGENALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 61  KFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120
           KFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWT DGSQIVSASPDKT
Sbjct: 61  KFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 301 DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           DTTSRRIL+KLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI 344

[Close]

BLAST of Lag0039834 vs. ExPASy TrEMBL
Match: A0A1S3BDK5 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucumis melo OX=3656 GN=LOC103488871 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.6e-202
Identity = 332/344 (96.51%), Postives = 338/344 (98.26%), Query Frame = 0


Query: 1   MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60
           MQ PSEGENALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 61  KFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120
           KFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWT DGSQIVSASPDKT
Sbjct: 61  KFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 121 LRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180
           LRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 301 DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           DTTSRRIL+KLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI 344

[Close]

BLAST of Lag0039834 vs. ExPASy TrEMBL
Match: A0A6J1DDM1 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Momordica charantia OX=3673 GN=LOC111019808 PE=4 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 2.1e-202
Identity = 334/341 (97.95%), Postives = 336/341 (98.53%), Query Frame = 0


Query: 4   PSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFN 63
           PSEG NALATVGPRPMEWSTVPY APQGPGPNGKQRTSSLES IMLLTGHQSAIYTLKFN
Sbjct: 5   PSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESSIMLLTGHQSAIYTLKFN 64

Query: 64  PAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRA 123
           PAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDG QIV+ASPDKTLRA
Sbjct: 65  PAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRA 124

Query: 124 WDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ 183
           WDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ
Sbjct: 125 WDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ 184

Query: 184 ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM 243
           ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Sbjct: 185 ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM 244

Query: 244 DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT 303
           DCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT
Sbjct: 245 DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT 304

Query: 304 SRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           SRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Sbjct: 305 SRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345

[Close]

BLAST of Lag0039834 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 658.7 bits (1698), Expect = 2.6e-189
Identity = 296/337 (87.83%), Postives = 320/337 (94.96%), Query Frame = 0


Query: 8   ENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGD 67
           EN  A  GPRPMEWSTVP+ A QGPGPNGK RTSSLE+PIMLL+GH SA+YT+KFNPAG 
Sbjct: 7   ENETALSGPRPMEWSTVPHSASQGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGT 66

Query: 68  VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVE 127
           +IASGSHD+EIFLW VHGDCKNFMVL+GHKNA+LDLHWT+DGSQIVSASPDKT+RAWDVE
Sbjct: 67  LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVE 126

Query: 128 TGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAV 187
           TGKQ+KKMAEHSSFVNSCCPTRRGPPLI+SGSDDGTAKLWDMRQRGAIQTFPDKYQITAV
Sbjct: 127 TGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAV 186

Query: 188 SFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKL 247
           SFSDA+DKIFTGG+DNDVKVWDLRKGE  MTL+GHQD ITGM LSPDGSYLLTNGMD KL
Sbjct: 187 SFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246

Query: 248 CIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRI 307
           C+WDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDG+KVTAGSSDRMV++WDTTSRR 
Sbjct: 247 CVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRT 306

Query: 308 LFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 345
           ++KLPGHTGSVNECVFHP+EPI+GSCSSDK IYLGEI
Sbjct: 307 IYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343

[Close]

BLAST of Lag0039834 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-39
Identity = 89/296 (30.07%), Postives = 154/296 (52.03%), Query Frame = 0


Query: 50  LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHW 109
           LT H  A+ ++KF+  G ++AS S DK I  + ++       +      GH+N + D+ +
Sbjct: 20  LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79

Query: 110 TTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAK 169
           ++D   IVSAS DKTL+ WDVETG  +K +  H+++   C        +IVSGS D T +
Sbjct: 80  SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYA-FCVNFNPQSNMIVSGSFDETVR 139

Query: 170 LWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQ 229
           +WD+     ++  P     +TAV F+     I +   D   ++WD   G  + TL     
Sbjct: 140 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 199

Query: 230 DMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 289
             ++ ++ SP+G ++L   +D  L +W++       + +K + GH  N +  +       
Sbjct: 200 PPVSFVRFSPNGKFILVGTLDNTLRLWNI----SSAKFLKTYTGHV-NAQYCISSAFSVT 259

Query: 290 DGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQI 340
           +G ++ +GS D  V++W+  S+++L KL GHT +V     HP+E ++ S S DK +
Sbjct: 260 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309

[Close]

BLAST of Lag0039834 vs. TAIR 10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 2.3e-28
Identity = 79/296 (26.69%), Postives = 129/296 (43.58%), Query Frame = 0


Query: 49  LLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTD 108
           +L GH+ A+   +FN  G+   +   D+ I LWN H         + H   V D+H T+D
Sbjct: 13  ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGIL-IKTYKSHGREVRDVHVTSD 72

Query: 109 GSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWD 168
            ++  S   D+ +  WDV TG+ ++K   H   VN+         ++VS   D + ++WD
Sbjct: 73  NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNA-VKFNDSSSVVVSAGFDRSLRVWD 132

Query: 169 MRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQ 228
            R         I TF D    T +S      +I  G +D  V+ +D+R G  M    G  
Sbjct: 133 CRSHSVEPVQIIDTFLD----TVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQP 192

Query: 229 DMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 288
             +  + +S DG+ +L   +D  L + D          +++++GH     K    C  + 
Sbjct: 193 --VNCISISNDGNCVLAGCLDSTLRLLD----RTTGELLQVYKGHISKSFKT--DCCLTN 252

Query: 289 DGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQI 340
             + V  GS D +V+ WD    ++L K   H   V    +HP E  + + S D  I
Sbjct: 253 SDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTI 294

[Close]

BLAST of Lag0039834 vs. TAIR 10
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative )

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-27
Identity = 85/301 (28.24%), Postives = 144/301 (47.84%), Query Frame = 0


Query: 50  LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDG 109
           + GH  A+  + F+P G  +ASGS D  + LW+++ +   F   +GHKN VL + W+ DG
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLF-TCKGHKNWVLTVAWSPDG 164

Query: 110 SQIVSASPDKTLRAWDVETGK-QVKKMAEHSSFVN--SCCPTRRGPPL--IVSGSDDGTA 169
             +VS S    +  W+ + G+ +   +  H  ++   S  P     P    V+ S DG A
Sbjct: 165 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 224

Query: 170 KLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQ 229
           ++WD+  ++  I        +T V +      I+TG  D  +K+W+  +G+++  L+GH 
Sbjct: 225 RIWDITLKKSIICLSGHTLAVTCVKWG-GDGIIYTGSQDCTIKMWETTQGKLIRELKGHG 284

Query: 230 DMITGMQLSPDGSYLLTNGMDCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSW 289
             I  + LS +  Y+L  G       +D   R Y P     K  E  ++N  K       
Sbjct: 285 HWINSLALSTE--YVLRTG------AFDHTGRQYPPNEEKQKALE--RYNKTK-----GD 344

Query: 290 SPDGSKVTAGSSDRMVYVWD-TTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIY 342
           SP+  ++ +GS D  +++W+ + S++   +L GH   VN   F P    + S S DK + 
Sbjct: 345 SPE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 386

[Close]

BLAST of Lag0039834 vs. TAIR 10
Match: AT5G08560.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 73/297 (24.58%), Postives = 146/297 (49.16%), Query Frame = 0


Query: 49  LLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFM--VLRGHKNAVLDLHWT 108
           +L  H   ++ L+F+  G  +AS S D+   +W +  D    +   L GH   V+ + W+
Sbjct: 269 ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWS 328

Query: 109 TDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSC--CPTRRGPPLIVSGSDDGTA 168
            D  Q+++   ++ +R WDV++G  V    +      SC   P  +G   I++G  D + 
Sbjct: 329 PDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQG---IIAGMTDRSI 388

Query: 169 KLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQ 228
            +WD+  R        + Q ++ ++ +D    + +   D+ + ++D R+  V   ++  +
Sbjct: 389 CMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD-REATVERLIE-EE 448

Query: 229 DMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 288
           DMIT   LS D  Y+L N ++ ++ +W++       + V  ++GH+ +    +  C    
Sbjct: 449 DMITSFSLSNDNKYILVNLLNQEIRLWNIE---GDPKIVSRYKGHKRS-RFIIRSCFGGY 508

Query: 289 DGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSE-PIVGSCSSDKQI 340
             + + +GS D  VY+W  ++ +++ +LPGH G+VN   + P+   ++ S S D  I
Sbjct: 509 KQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTI 556

The following BLAST results are available for this feature:

BLAST of Lag0039834 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945717.1	5.4e-205	97.97	U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] >KAG65735...	[more]
XP_023542336.1	1.6e-204	97.67	U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita pepo subsp. pepo]	[more]
XP_022966914.1	2.1e-204	97.67	U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima]	[more]
XP_008446018.1	3.3e-202	96.51	PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] >KAA...	[more]
XP_022151978.1	4.3e-202	97.95	U5 small nuclear ribonucleoprotein 40 kDa protein [Momordica charantia]	[more]

BLAST of Lag0039834 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96DI7	6.4e-124	61.49	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens OX=9606 GN=SNR...	[more]
Q6PE01	1.1e-123	60.84	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Sn...	[more]
Q2HJH6	1.4e-123	61.17	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus OX=9913 GN=SNRNP...	[more]
Q5RF51	6.0e-122	60.84	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii OX=9601 GN=SNR...	[more]
Q55AR8	3.6e-111	56.77	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum OX...	[more]

BLAST of Lag0039834 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1Q0	2.6e-205	97.97	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HV60	1.0e-204	97.67	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucurbita maxima OX=3661 GN...	[more]
A0A5A7SYI1	1.6e-202	96.51	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BDK5	1.6e-202	96.51	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1DDM1	2.1e-202	97.95	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Momordica charantia OX=3673...	[more]

BLAST of Lag0039834 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43770.1	2.6e-189	87.83	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	1.3e-39	30.07	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64730.1	2.3e-28	26.69	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G52820.1	2.0e-27	28.24	WD-40 repeat family protein / notchless protein, putative	[more]
AT5G08560.1	1.1e-25	24.58	transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 155..169 score: 41.82 coord: 112..126 score: 37.9 coord: 69..83 score: 35.64
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 304..343 e-value: 0.0023 score: 27.2 coord: 43..82 e-value: 6.2E-8 score: 42.4 coord: 258..301 e-value: 1.1E-6 score: 38.2 coord: 128..168 e-value: 1.4E-7 score: 41.2 coord: 212..251 e-value: 1.6E-8 score: 44.3 coord: 171..209 e-value: 3.2E-4 score: 30.0 coord: 86..125 e-value: 4.4E-8 score: 42.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 130..168 e-value: 3.7E-4 score: 21.2 coord: 88..125 e-value: 2.4E-4 score: 21.8 coord: 308..341 e-value: 0.094 score: 13.6 coord: 46..82 e-value: 2.5E-6 score: 28.1 coord: 260..301 e-value: 2.4E-6 score: 28.1 coord: 184..209 e-value: 0.0089 score: 16.9 coord: 214..251 e-value: 7.2E-6 score: 26.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 311..344 score: 8.870959
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 135..177 score: 10.541869
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 93..134 score: 16.557146
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 50..83 score: 15.186998
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 184..218 score: 12.580379
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 219..253 score: 13.516088
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 280..310 score: 10.742378
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 42..344 e-value: 2.3E-121 score: 406.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR44006	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN	coord: 30..344
None	No IPR available	PANTHER	PTHR44006:SF1	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN	coord: 30..344
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 50..83 score: 12.525585
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 219..253 score: 11.207411
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 93..130 score: 12.578312
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 177..214 score: 9.151057
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 311..344 score: 8.861059
None	No IPR available	CDD	cd00200	WD40	coord: 50..341 e-value: 1.89797E-73 score: 227.218
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 69..83
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 155..169
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 196..210
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 288..302
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 112..126
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 47..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039834.1	Lag0039834.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0071013	catalytic step 2 spliceosome
molecular_function	GO:0005515	protein binding