Lag0039724 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039724
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr2: 48953516 .. 48955042 (+)
RNA-Seq ExpressionLag0039724
SyntenyLag0039724
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATGAGAGAGGAGGCTGAATTAGCTAAGCAATTAGCAGAGATGCATGTCACTCCGGCGGAAAAATCTAGCGTATTCCAATTGCCAGATAGTGAGATCGACCGATCAGATAAAAAACTGATGAATACGATTTTGTGCAAAGTATATACAAAGAAGAAGATTAACCCTGAAATGTTCAGTTCAAAGATGCCGAAAATATGGAATCAAGAACATACGATCATTAATATGGTGGGATTCAATATTTTTGTATGCAAGTTCAAGAATGAAAAAATCAAAGGATGGATCGTGGAGTCGGGTCCATGGTTTTACGATAAAGCGATGCTACTATTTGAAGAGCCTAAAGCAGGAATCAGCAGCGATGATATGGAATTCAGGTATGTTTCTCTATGGACTCACTTTCATAAATTACCATATGCTTGTTTTTCTAGGACATCGGCAGTTGCTATTGGAAACTTGTTAGGACATGTGGAAAAAGTGGATATTCAAGACGATGCTGATCCTTCATGGGGTTGTTCCTTGCGGATTAAAATTCAAATAGATGTGTATGTTCCGCTGAAAAGAGGTATCTTTTTGAAGTCCGACAGTAAGGGGAAGGACAAATGGATTCCAGTTACATATGAAAAGCTCCCCGATTTTTGCTATGGTTGTGGTTGTTTGGGACACACTATTAAAGAATGCGAGGATATAGCAGGATCCAAAGACGGGGAGTTAAGCTATGGGGCATGGATGAGAGAGCCCATAAGAATATGGAACTTAGAGGGAGGCGATCTGATGATTAGGAATGCCTATGGTCGTGGGAGGGGTGGTTCGTGGAGCGGGGTTAGAGGTAGGGGCAGATCGAATTATTTTGAGTATGGAGATGAGGGGGAAGGCCAACAACAATCTCCGGTCAACGACCAAGGTGGCACGTCAATCCCAACACCGGCGACGAAAAGTACAGACTCACCGACGGTCAAGGCCTCTATGTCAGGTAAGGAAAGAGTAACGGTTGTTTCTCGCGAGGTTGACTTGGAGGAAAATAAGGAATGTGGTATTAATGGACATGTTGGATTCAAAGGTAAGGAGAAAGTTTTAATTGATATGGATGGAAACCAAGAGCTGGAGGATTCCTTTTCCATAAACGATGAGCTGATTTTGGGGGATGATGACAAAATAAAGGGACCCACCCTATTAATGGAGATTGATCCGTTGGAGTTGGGGGAAAGGGAAGCGGTTGATTTCATTAACATGGAAGATAATAAAATTAAAGATCCTAAAGGAAAGAAGGCGGTCAGTGGGTCTGCAGTTAAAGATAAGTCTGAGATTAAGGATGTTAGTAAATCTAGAAAATGGAAAAGAGTCCCACGAGAGAATCATAATAAGGGAGAAATCAGAGAAAAGTATCAGCCTCTTAGTGGTTCAAAGCATAAGGCTGAAATGAATGTGAGTCAGACGGAACCAAACAAGAAAAGGGTGGTGATTGTGGATATCGAATCAAACGCGCGATCGATGGAGGCTGCTGGACAGCCCCGCCGGGCACAATGA

mRNA sequence

ATGGCTATGAGAGAGGAGGCTGAATTAGCTAAGCAATTAGCAGAGATGCATGTCACTCCGGCGGAAAAATCTAGCGTATTCCAATTGCCAGATAGTGAGATCGACCGATCAGATAAAAAACTGATGAATACGATTTTGTGCAAAGTATATACAAAGAAGAAGATTAACCCTGAAATGTTCAGTTCAAAGATGCCGAAAATATGGAATCAAGAACATACGATCATTAATATGGTGGGATTCAATATTTTTGTATGCAAGTTCAAGAATGAAAAAATCAAAGGATGGATCGTGGAGTCGGGTCCATGGTTTTACGATAAAGCGATGCTACTATTTGAAGAGCCTAAAGCAGGAATCAGCAGCGATGATATGGAATTCAGGTATGTTTCTCTATGGACTCACTTTCATAAATTACCATATGCTTGTTTTTCTAGGACATCGGCAGTTGCTATTGGAAACTTGTTAGGACATGTGGAAAAAGTGGATATTCAAGACGATGCTGATCCTTCATGGGGTTGTTCCTTGCGGATTAAAATTCAAATAGATGTGTATGTTCCGCTGAAAAGAGGTATCTTTTTGAAGTCCGACAGTAAGGGGAAGGACAAATGGATTCCAGTTACATATGAAAAGCTCCCCGATTTTTGCTATGGTTGTGGTTGTTTGGGACACACTATTAAAGAATGCGAGGATATAGCAGGATCCAAAGACGGGGAGTTAAGCTATGGGGCATGGATGAGAGAGCCCATAAGAATATGGAACTTAGAGGGAGGCGATCTGATGATTAGGAATGCCTATGGTCGTGGGAGGGGTGGTTCGTGGAGCGGGGTTAGAGGTAGGGGCAGATCGAATTATTTTGAGTATGGAGATGAGGGGGAAGGCCAACAACAATCTCCGGTCAACGACCAAGGTGGCACGTCAATCCCAACACCGGCGACGAAAAGTACAGACTCACCGACGGTCAAGGCCTCTATGTCAGGTAAGGAAAGAGTAACGGTTGTTTCTCGCGAGGTTGACTTGGAGGAAAATAAGGAATGTGGTATTAATGGACATGTTGGATTCAAAGGTAAGGAGAAAGTTTTAATTGATATGGATGGAAACCAAGAGCTGGAGGATTCCTTTTCCATAAACGATGAGCTGATTTTGGGGGATGATGACAAAATAAAGGGACCCACCCTATTAATGGAGATTGATCCGTTGGAGTTGGGGGAAAGGGAAGCGGTTGATTTCATTAACATGGAAGATAATAAAATTAAAGATCCTAAAGGAAAGAAGGCGGTCAGTGGGTCTGCAGTTAAAGATAAGTCTGAGATTAAGGATGTTAGTAAATCTAGAAAATGGAAAAGAGTCCCACGAGAGAATCATAATAAGGGAGAAATCAGAGAAAAGTATCAGCCTCTTAGTGGTTCAAAGCATAAGGCTGAAATGAATGTGAGTCAGACGGAACCAAACAAGAAAAGGGTGGTGATTGTGGATATCGAATCAAACGCGCGATCGATGGAGGCTGCTGGACAGCCCCGCCGGGCACAATGA

Coding sequence (CDS)

ATGGCTATGAGAGAGGAGGCTGAATTAGCTAAGCAATTAGCAGAGATGCATGTCACTCCGGCGGAAAAATCTAGCGTATTCCAATTGCCAGATAGTGAGATCGACCGATCAGATAAAAAACTGATGAATACGATTTTGTGCAAAGTATATACAAAGAAGAAGATTAACCCTGAAATGTTCAGTTCAAAGATGCCGAAAATATGGAATCAAGAACATACGATCATTAATATGGTGGGATTCAATATTTTTGTATGCAAGTTCAAGAATGAAAAAATCAAAGGATGGATCGTGGAGTCGGGTCCATGGTTTTACGATAAAGCGATGCTACTATTTGAAGAGCCTAAAGCAGGAATCAGCAGCGATGATATGGAATTCAGGTATGTTTCTCTATGGACTCACTTTCATAAATTACCATATGCTTGTTTTTCTAGGACATCGGCAGTTGCTATTGGAAACTTGTTAGGACATGTGGAAAAAGTGGATATTCAAGACGATGCTGATCCTTCATGGGGTTGTTCCTTGCGGATTAAAATTCAAATAGATGTGTATGTTCCGCTGAAAAGAGGTATCTTTTTGAAGTCCGACAGTAAGGGGAAGGACAAATGGATTCCAGTTACATATGAAAAGCTCCCCGATTTTTGCTATGGTTGTGGTTGTTTGGGACACACTATTAAAGAATGCGAGGATATAGCAGGATCCAAAGACGGGGAGTTAAGCTATGGGGCATGGATGAGAGAGCCCATAAGAATATGGAACTTAGAGGGAGGCGATCTGATGATTAGGAATGCCTATGGTCGTGGGAGGGGTGGTTCGTGGAGCGGGGTTAGAGGTAGGGGCAGATCGAATTATTTTGAGTATGGAGATGAGGGGGAAGGCCAACAACAATCTCCGGTCAACGACCAAGGTGGCACGTCAATCCCAACACCGGCGACGAAAAGTACAGACTCACCGACGGTCAAGGCCTCTATGTCAGGTAAGGAAAGAGTAACGGTTGTTTCTCGCGAGGTTGACTTGGAGGAAAATAAGGAATGTGGTATTAATGGACATGTTGGATTCAAAGGTAAGGAGAAAGTTTTAATTGATATGGATGGAAACCAAGAGCTGGAGGATTCCTTTTCCATAAACGATGAGCTGATTTTGGGGGATGATGACAAAATAAAGGGACCCACCCTATTAATGGAGATTGATCCGTTGGAGTTGGGGGAAAGGGAAGCGGTTGATTTCATTAACATGGAAGATAATAAAATTAAAGATCCTAAAGGAAAGAAGGCGGTCAGTGGGTCTGCAGTTAAAGATAAGTCTGAGATTAAGGATGTTAGTAAATCTAGAAAATGGAAAAGAGTCCCACGAGAGAATCATAATAAGGGAGAAATCAGAGAAAAGTATCAGCCTCTTAGTGGTTCAAAGCATAAGGCTGAAATGAATGTGAGTCAGACGGAACCAAACAAGAAAAGGGTGGTGATTGTGGATATCGAATCAAACGCGCGATCGATGGAGGCTGCTGGACAGCCCCGCCGGGCACAATGA

Protein sequence

MAMREEAELAKQLAEMHVTPAEKSSVFQLPDSEIDRSDKKLMNTILCKVYTKKKINPEMFSSKMPKIWNQEHTIINMVGFNIFVCKFKNEKIKGWIVESGPWFYDKAMLLFEEPKAGISSDDMEFRYVSLWTHFHKLPYACFSRTSAVAIGNLLGHVEKVDIQDDADPSWGCSLRIKIQIDVYVPLKRGIFLKSDSKGKDKWIPVTYEKLPDFCYGCGCLGHTIKECEDIAGSKDGELSYGAWMREPIRIWNLEGGDLMIRNAYGRGRGGSWSGVRGRGRSNYFEYGDEGEGQQQSPVNDQGGTSIPTPATKSTDSPTVKASMSGKERVTVVSREVDLEENKECGINGHVGFKGKEKVLIDMDGNQELEDSFSINDELILGDDDKIKGPTLLMEIDPLELGEREAVDFINMEDNKIKDPKGKKAVSGSAVKDKSEIKDVSKSRKWKRVPRENHNKGEIREKYQPLSGSKHKAEMNVSQTEPNKKRVVIVDIESNARSMEAAGQPRRAQ
Homology
BLAST of Lag0039724 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 3.2e-36
Identity = 81/243 (33.33%), Postives = 132/243 (54.32%), Query Frame = 0

Query: 7   AELAKQLAEMHVTPAEKSSVFQLPDSEIDRSDKKLMNTILCKVYTKKKINPEMFSSKMPK 66
           + L ++     +T  E      +  S ++ + K L  +++CK+ +K+ I+  +  + +  
Sbjct: 4   SNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKI 63

Query: 67  IWNQEHTI--INMVGFNIFVCKFKNEKIKGWIVESGPWFYDKAMLLFEEPKAGISSDDME 126
            W  +     ++++GFNIF+  F     +  I+  GPW +D+A+++ + P +     DM+
Sbjct: 64  AWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMD 123

Query: 127 FRYVSLWTHFHKLPYACFSRTSAVAIGNLLGHVEKVDIQDDADP-SWGCSLRIKIQIDVY 186
           FR VSLW HF  L  AC ++T A  +GN +G  E  D++ +A+   WG  LR++++ DV 
Sbjct: 124 FRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFE--DVESNANNFCWGSCLRVRVRFDVM 183

Query: 187 VPLKRGIFLKSDSKGKDKWIPVTYEKLPDFCYGCGCLGHTIKECED-IAGSKDGELSYGA 246
            PL RGI L  D      WIP+ YE+LPDF Y CG L H +K+C D    S    L YG 
Sbjct: 184 KPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGP 243

BLAST of Lag0039724 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-35
Identity = 89/243 (36.63%), Postives = 137/243 (56.38%), Query Frame = 0

Query: 45  ILCKVYTKKKINPEMFSSKMPKIWN-QEHTIINMVGFNIFVCKFKNEKIKGWIVESGPWF 104
           ++ K++T K+I+ E   S M  +W     T    +G NI+V  FK+   K  ++ SGPW 
Sbjct: 39  VVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWT 98

Query: 105 YDKAMLLFEEPKAGISSDDMEFRYVSLWTHFHKLPYACFSRTSAVAIGNLLGHVEKVDIQ 164
           ++K++L+   P A     DM F + + W   H +P+ C S   A  +G  LG VE+++  
Sbjct: 99  FNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIE-G 158

Query: 165 DDADPSWGCSLRIKIQIDVYVPLKRGIFLKSDSKGKDKWIPVTYEKLPDFCYGCGCLGHT 224
           D AD   G  +R++++IDV  PL+RGI LK +S GKD W P+ YEKLPDFCY CG +GH+
Sbjct: 159 DGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDGKDIWCPLRYEKLPDFCYECGKIGHS 218

Query: 225 IKECEDIAG--SKDGELSYGAWMREPIRIWNLEGGDLMIRNAYGR-GRGGSWSGVRGRGR 284
            +ECE  +   + +    YG W+R  +   ++   +  +    GR GRG   +G RG GR
Sbjct: 219 GRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRG-GR 278

BLAST of Lag0039724 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 153.3 bits (386), Expect = 5.6e-33
Identity = 80/242 (33.06%), Postives = 130/242 (53.72%), Query Frame = 0

Query: 35  DRSDKKLMNTILCKVYTKKKINPEMFSSKMPKIWNQEHTI-INMVGFNIFVCKFKNEKIK 94
           +R ++ L  +++ K  T K IN E F S +  IW  ++ + + ++G NIF  +F+N   +
Sbjct: 31  ERGEQSLSLSLIGKAITNKVINREAFKSTISTIWQTKNEVTMELMGINIFKFRFQNYWDR 90

Query: 95  GWIVESGPWFYDKAMLLFEEPKAGISSDDMEFRYVSLWTHFHKLPYACFSRTSAVAIGNL 154
             I+E GPW +DK +L+  E        D++FRYV  W   H LP AC +R   + +G L
Sbjct: 91  KRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGL 150

Query: 155 LGHVEKVDIQDDADPSWGCSLRIKIQIDVYVPLKRGIFLKSDSKGKDKWIPVTYEKLPDF 214
           +G V+++D  +  +   G  +RI++ IDV  PLKRG+ +      K   + + YE+LP+F
Sbjct: 151 VGQVKEIDAGESGE-CVGQFIRIRVLIDVMNPLKRGLRVALGDDEKVNEVMICYERLPNF 210

Query: 215 CYGCGCLGHTIKEC----EDIAGSKDGELSYGAWMREPIRIWNLEGGDLMIRNAYGRGRG 272
           CY CG +GH +++C    ++I  S      +G WMR   R  +   G+    +  G   G
Sbjct: 211 CYYCGKIGHLVRDCPLNTKEITSS--SSFKFGPWMRAVSRTRSKGTGEKK-NSPEGSREG 268

BLAST of Lag0039724 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-32
Identity = 88/304 (28.95%), Postives = 152/304 (50.00%), Query Frame = 0

Query: 18  VTPAEKSSVFQLPDSEIDRSDKKLMNTILCKVYTKKKINPEMFSSKMPKIWNQEHTI-IN 77
           +T  E      +    +  +++ L  +++ K+  K+ I+ ++ S  +   W  EH + + 
Sbjct: 15  LTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVE 74

Query: 78  MVGFNIFVCKFKNEKIKGWIVESGPWFYDKAMLLFEEPKAGISSDDMEFRYVSLWTHFHK 137
            +G N+F+  F  E     ++++GPWF+DKA+++ ++P +  +  ++EF  V+ W H   
Sbjct: 75  SIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFD 134

Query: 138 LPYACFSRTSAVAIGNLLGHVEKVDIQDDADPSWGCSLRIKIQIDVYVPLKRGIFLKSDS 197
           LP +  ++T A+ +GN +G+   VD  +    SWG SLRI++ ID+  PL+RGI +  D 
Sbjct: 135 LPMSWLNKTMAIRLGNAIGNFVDVDCNEKGF-SWGASLRIRVLIDITKPLRRGIKINIDG 194

Query: 198 KGKDKWIPVTYEKLPDFCYGCGCLGHTIKECED--IAGSKDGELS--YGAWMREPIRIWN 257
                WIP+ YE+LPDFCY CG +GH+  +C+   +A   D   +  YG W+R       
Sbjct: 195 PMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFV----- 254

Query: 258 LEGGDLMIRNAYGRGRGGSWSGVRGRGRSNYFEYGDEGEGQQQSPVNDQGGTSIPTPATK 317
              G         +G+  +     G    N  E G E   QQ S   +Q G      A +
Sbjct: 255 ---GSKAGAQKGRKGKSPAREDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQAAAEQ 309

BLAST of Lag0039724 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense])

HSP 1 Score: 151.4 bits (381), Expect = 2.1e-32
Identity = 75/245 (30.61%), Postives = 133/245 (54.29%), Query Frame = 0

Query: 6   EAELAKQLAEMHVTPAEKSSVFQLPDSEIDRSDKKLMNTILCKVYTKKKINPEMFSSKMP 65
           EAE+  QL E      E ++V ++ +  I   D+ +   ++ KV T KK+N E F   + 
Sbjct: 3   EAEIT-QLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIE 62

Query: 66  KIWNQEHTI-INMVGFNIFVCKFKNEKIKGWIVESGPWFYDKAMLLFEEPKAGISSDDME 125
           +IWNQ   + + +VG N F+  F N++ +  +   GPW + K++++ E+PK       ++
Sbjct: 63  QIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLK 122

Query: 126 FRYVSLWTHFHKLPYACFSRTSAVAIGNLLGHVEKVDIQDDADPSWGCSLRIKIQIDVYV 185
           F     W   H +P  C ++ +   +   +G V  V+I  ++   WG  +R+K+Q+D+  
Sbjct: 123 FNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEV--VEIPTESRECWGKYVRVKVQVDITK 182

Query: 186 PLKRGIFLKSDSKGKDKWIPVTYEKLPDFCYGCGCLGHTIKECEDIAGSK---DG-ELSY 245
           PLKR + +K     +   + + YE+LPDFC+ CG +GH+++EC D    +   DG +  +
Sbjct: 183 PLKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKF 242

BLAST of Lag0039724 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-36
Identity = 81/243 (33.33%), Postives = 132/243 (54.32%), Query Frame = 0

Query: 7   AELAKQLAEMHVTPAEKSSVFQLPDSEIDRSDKKLMNTILCKVYTKKKINPEMFSSKMPK 66
           + L ++     +T  E      +  S ++ + K L  +++CK+ +K+ I+  +  + +  
Sbjct: 4   SNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKI 63

Query: 67  IWNQEHTI--INMVGFNIFVCKFKNEKIKGWIVESGPWFYDKAMLLFEEPKAGISSDDME 126
            W  +     ++++GFNIF+  F     +  I+  GPW +D+A+++ + P +     DM+
Sbjct: 64  AWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMD 123

Query: 127 FRYVSLWTHFHKLPYACFSRTSAVAIGNLLGHVEKVDIQDDADP-SWGCSLRIKIQIDVY 186
           FR VSLW HF  L  AC ++T A  +GN +G  E  D++ +A+   WG  LR++++ DV 
Sbjct: 124 FRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFE--DVESNANNFCWGSCLRVRVRFDVM 183

Query: 187 VPLKRGIFLKSDSKGKDKWIPVTYEKLPDFCYGCGCLGHTIKECED-IAGSKDGELSYGA 246
            PL RGI L  D      WIP+ YE+LPDF Y CG L H +K+C D    S    L YG 
Sbjct: 184 KPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGP 243

BLAST of Lag0039724 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.9e-36
Identity = 89/243 (36.63%), Postives = 137/243 (56.38%), Query Frame = 0

Query: 45  ILCKVYTKKKINPEMFSSKMPKIWN-QEHTIINMVGFNIFVCKFKNEKIKGWIVESGPWF 104
           ++ K++T K+I+ E   S M  +W     T    +G NI+V  FK+   K  ++ SGPW 
Sbjct: 39  VVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWT 98

Query: 105 YDKAMLLFEEPKAGISSDDMEFRYVSLWTHFHKLPYACFSRTSAVAIGNLLGHVEKVDIQ 164
           ++K++L+   P A     DM F + + W   H +P+ C S   A  +G  LG VE+++  
Sbjct: 99  FNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIE-G 158

Query: 165 DDADPSWGCSLRIKIQIDVYVPLKRGIFLKSDSKGKDKWIPVTYEKLPDFCYGCGCLGHT 224
           D AD   G  +R++++IDV  PL+RGI LK +S GKD W P+ YEKLPDFCY CG +GH+
Sbjct: 159 DGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDGKDIWCPLRYEKLPDFCYECGKIGHS 218

Query: 225 IKECEDIAG--SKDGELSYGAWMREPIRIWNLEGGDLMIRNAYGR-GRGGSWSGVRGRGR 284
            +ECE  +   + +    YG W+R  +   ++   +  +    GR GRG   +G RG GR
Sbjct: 219 GRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRG-GR 278

BLAST of Lag0039724 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.7e-33
Identity = 80/242 (33.06%), Postives = 130/242 (53.72%), Query Frame = 0

Query: 35  DRSDKKLMNTILCKVYTKKKINPEMFSSKMPKIWNQEHTI-INMVGFNIFVCKFKNEKIK 94
           +R ++ L  +++ K  T K IN E F S +  IW  ++ + + ++G NIF  +F+N   +
Sbjct: 31  ERGEQSLSLSLIGKAITNKVINREAFKSTISTIWQTKNEVTMELMGINIFKFRFQNYWDR 90

Query: 95  GWIVESGPWFYDKAMLLFEEPKAGISSDDMEFRYVSLWTHFHKLPYACFSRTSAVAIGNL 154
             I+E GPW +DK +L+  E        D++FRYV  W   H LP AC +R   + +G L
Sbjct: 91  KRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGL 150

Query: 155 LGHVEKVDIQDDADPSWGCSLRIKIQIDVYVPLKRGIFLKSDSKGKDKWIPVTYEKLPDF 214
           +G V+++D  +  +   G  +RI++ IDV  PLKRG+ +      K   + + YE+LP+F
Sbjct: 151 VGQVKEIDAGESGE-CVGQFIRIRVLIDVMNPLKRGLRVALGDDEKVNEVMICYERLPNF 210

Query: 215 CYGCGCLGHTIKEC----EDIAGSKDGELSYGAWMREPIRIWNLEGGDLMIRNAYGRGRG 272
           CY CG +GH +++C    ++I  S      +G WMR   R  +   G+    +  G   G
Sbjct: 211 CYYCGKIGHLVRDCPLNTKEITSS--SSFKFGPWMRAVSRTRSKGTGEKK-NSPEGSREG 268

BLAST of Lag0039724 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.9e-33
Identity = 88/304 (28.95%), Postives = 152/304 (50.00%), Query Frame = 0

Query: 18  VTPAEKSSVFQLPDSEIDRSDKKLMNTILCKVYTKKKINPEMFSSKMPKIWNQEHTI-IN 77
           +T  E      +    +  +++ L  +++ K+  K+ I+ ++ S  +   W  EH + + 
Sbjct: 15  LTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVE 74

Query: 78  MVGFNIFVCKFKNEKIKGWIVESGPWFYDKAMLLFEEPKAGISSDDMEFRYVSLWTHFHK 137
            +G N+F+  F  E     ++++GPWF+DKA+++ ++P +  +  ++EF  V+ W H   
Sbjct: 75  SIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFD 134

Query: 138 LPYACFSRTSAVAIGNLLGHVEKVDIQDDADPSWGCSLRIKIQIDVYVPLKRGIFLKSDS 197
           LP +  ++T A+ +GN +G+   VD  +    SWG SLRI++ ID+  PL+RGI +  D 
Sbjct: 135 LPMSWLNKTMAIRLGNAIGNFVDVDCNEKGF-SWGASLRIRVLIDITKPLRRGIKINIDG 194

Query: 198 KGKDKWIPVTYEKLPDFCYGCGCLGHTIKECED--IAGSKDGELS--YGAWMREPIRIWN 257
                WIP+ YE+LPDFCY CG +GH+  +C+   +A   D   +  YG W+R       
Sbjct: 195 PMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFV----- 254

Query: 258 LEGGDLMIRNAYGRGRGGSWSGVRGRGRSNYFEYGDEGEGQQQSPVNDQGGTSIPTPATK 317
              G         +G+  +     G    N  E G E   QQ S   +Q G      A +
Sbjct: 255 ---GSKAGAQKGRKGKSPAREDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQAAAEQ 309

BLAST of Lag0039724 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.0e-32
Identity = 75/245 (30.61%), Postives = 133/245 (54.29%), Query Frame = 0

Query: 6   EAELAKQLAEMHVTPAEKSSVFQLPDSEIDRSDKKLMNTILCKVYTKKKINPEMFSSKMP 65
           EAE+  QL E      E ++V ++ +  I   D+ +   ++ KV T KK+N E F   + 
Sbjct: 3   EAEIT-QLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIE 62

Query: 66  KIWNQEHTI-INMVGFNIFVCKFKNEKIKGWIVESGPWFYDKAMLLFEEPKAGISSDDME 125
           +IWNQ   + + +VG N F+  F N++ +  +   GPW + K++++ E+PK       ++
Sbjct: 63  QIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLK 122

Query: 126 FRYVSLWTHFHKLPYACFSRTSAVAIGNLLGHVEKVDIQDDADPSWGCSLRIKIQIDVYV 185
           F     W   H +P  C ++ +   +   +G V  V+I  ++   WG  +R+K+Q+D+  
Sbjct: 123 FNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEV--VEIPTESRECWGKYVRVKVQVDITK 182

Query: 186 PLKRGIFLKSDSKGKDKWIPVTYEKLPDFCYGCGCLGHTIKECEDIAGSK---DG-ELSY 245
           PLKR + +K     +   + + YE+LPDFC+ CG +GH+++EC D    +   DG +  +
Sbjct: 183 PLKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKF 242

BLAST of Lag0039724 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 43.9 bits (102), Expect = 4.5e-04
Identity = 29/141 (20.57%), Postives = 50/141 (35.46%), Query Frame = 0

Query: 87  FKNEKIKGWIVESGPWFYDKAMLLFEEPKAGISSDDMEFRYVSLWTHFHKLPYACFSRTS 146
           F++E+    I+  GPW ++  M + +  +      D EF+ +  W     +P    +   
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 147 AVAIGNLLGHVEKVDIQDDADPSWGCSLRIKIQIDVYVPLKRGIFLKSDSKGKDKWIPVT 206
             +IG                                   + G+FL+++       +   
Sbjct: 126 ITSIGE----------------------------------RMGLFLETNLGRDVSVLKFQ 170

Query: 207 YEKLPDFCYGCGCLGHTIKEC 228
           YEKL +FC  CG L H   EC
Sbjct: 186 YEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022132681.13.2e-3633.33uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022149484.11.2e-3536.63uncharacterized protein LOC111017902 [Momordica charantia][more]
TXG54013.15.6e-3333.06hypothetical protein EZV62_019269 [Acer yangbiense][more]
XP_022156185.11.6e-3228.95uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
TXG48193.12.1e-3230.61hypothetical protein EZV62_027487 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BSZ11.5e-3633.33uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1D7655.9e-3636.63uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5C7H9Y22.7e-3333.06CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A6J1DU557.9e-3328.95uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5C7GU641.0e-3230.61CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748... [more]
Match NameE-valueIdentityDescription
AT3G42140.14.5e-0420.57zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 180..228
e-value: 1.8E-11
score: 43.5
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 34..164
e-value: 1.1E-18
score: 67.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..467
NoneNo IPR availablePANTHERPTHR31286:SF62SUBFAMILY NOT NAMEDcoord: 22..483
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 22..483
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 214..229
score: 8.828579

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039724.1Lag0039724.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding