Lag0039710 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACACCGCGTGGCTTGCCTGCTTGTCTTCTTGTTGAGCATTTTTACAATGGATTGAATCAAACTTCCAAAGCAATAGTCAATGCATCAGCTAATGCTTTGTTGCTTAAAAATACTTTCAATGAGGCAAATGAGATTTTAGACGCAATTGTTGCAAATAACAGTCAATGTGGAGAAGAAGAAACACCATCTAGAAGCAGTGTCAAGATCCAAGAAGTCAATCATCTCGAGACACTATCGGAGCGGATGCTAACTATGAATGGTATGCTTATGAATCTTACTTTAGGGAATCAAGTTCAAGTTCCAGTCGTGAGTCAAGTTTTAACCCCCATGTGCACTACTTGTATGAAGAGCACTCATTTGAAGATTGTCCTCAAAATCCAACTTTAGTATATTTTGTAGGTGCACAGAACCAAATAAATCCTTATTCCAACGCATATAATCCATGATGGAGACAACACCCTAACTTATCATGGGGAGGAAAAAATGCAAGTGCATCCAATGTAAAACCTTTCGTTAAATAGGGAGAAACACCAAAATTAAAAGGTCAAGCTCAACTAAAGATTTCACAGCCTTTGCAGCCGCAAATGCAGCAATAGCCAATGCAAGTGCAACCCCTATCAACAACAAACTGGAGAATCTTATGAGGGAACTAATGACCAAGAATGACGTAGTAATTCAAAGTCAAATAGCTTCCTTGAGGAGTTTAGAATCTCAAATTGGGCAGTTAGCCAAGGAAATGAGGAACAGACCAATAGGGACCCTACCAAGCAATACAAAGAACTCGAAAAAAGAAGGCCTAAGCAAGGATAAGGCCTCCATTTCCTAA ATGTCCACACCGCGTGGCTTGCCTGCTTGTCTTCTTGTTGAGCATTTTTACAATGGATTGAATCAAACTTCCAAAGCAATAGTCAATGCATCAGCTAATGCTTTGTTGCTTAAAAATACTTTCAATGAGGCAAATGAGATTTTAGACGCAATTGTTGCAAATAACAGTCAATGTGGAGAAGAAGAAACACCATCTAGAAGCAGTGTCAAGATCCAAGAAGTCAATCATCTCGAGACACTATCGGAGCGGATGCTAACTATGAATGCCGCAAATGCAGCAATAGCCAATGCAAGTGCAACCCCTATCAACAACAAACTGGAGAATCTTATGAGGGAACTAATGACCAAGAATGACGTAGTAATTCAAAGTCAAATAGCTTCCTTGAGGAGTTTAGAATCTCAAATTGGGCAGTTAGCCAAGGAAATGAGGAACAGACCAATAGGGACCCTACCAAGCAATACAAAGAACTCGAAAAAAGAAGGCCTAAGCAAGGATAAGGCCTCCATTTCCTAA ATGTCCACACCGCGTGGCTTGCCTGCTTGTCTTCTTGTTGAGCATTTTTACAATGGATTGAATCAAACTTCCAAAGCAATAGTCAATGCATCAGCTAATGCTTTGTTGCTTAAAAATACTTTCAATGAGGCAAATGAGATTTTAGACGCAATTGTTGCAAATAACAGTCAATGTGGAGAAGAAGAAACACCATCTAGAAGCAGTGTCAAGATCCAAGAAGTCAATCATCTCGAGACACTATCGGAGCGGATGCTAACTATGAATGCCGCAAATGCAGCAATAGCCAATGCAAGTGCAACCCCTATCAACAACAAACTGGAGAATCTTATGAGGGAACTAATGACCAAGAATGACGTAGTAATTCAAAGTCAAATAGCTTCCTTGAGGAGTTTAGAATCTCAAATTGGGCAGTTAGCCAAGGAAATGAGGAACAGACCAATAGGGACCCTACCAAGCAATACAAAGAACTCGAAAAAAGAAGGCCTAAGCAAGGATAAGGCCTCCATTTCCTAA MSTPRGLPACLLVEHFYNGLNQTSKAIVNASANALLLKNTFNEANEILDAIVANNSQCGEEETPSRSSVKIQEVNHLETLSERMLTMNAANAAIANASATPINNKLENLMRELMTKNDVVIQSQIASLRSLESQIGQLAKEMRNRPIGTLPSNTKNSKKEGLSKDKASIS Homology
BLAST of Lag0039710 vs. NCBI nr
Match: XP_030509265.1 (uncharacterized protein LOC115723943 [Cannabis sativa]) HSP 1 Score: 112.8 bits (281), Expect = 2.8e-21 Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 0
BLAST of Lag0039710 vs. NCBI nr
Match: XP_023522102.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 105.9 bits (263), Expect = 3.5e-19 Identity = 70/169 (41.42%), Postives = 103/169 (60.95%), Query Frame = 0
BLAST of Lag0039710 vs. NCBI nr
Match: XP_030494802.1 (uncharacterized protein LOC115710583 [Cannabis sativa]) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-18 Identity = 76/232 (32.76%), Postives = 110/232 (47.41%), Query Frame = 0
BLAST of Lag0039710 vs. NCBI nr
Match: XP_030490806.1 (uncharacterized protein LOC115707099 [Cannabis sativa]) HSP 1 Score: 102.8 bits (255), Expect = 2.9e-18 Identity = 73/206 (35.44%), Postives = 105/206 (50.97%), Query Frame = 0
BLAST of Lag0039710 vs. NCBI nr
Match: KAG8475506.1 (hypothetical protein CXB51_032293 [Gossypium anomalum]) HSP 1 Score: 102.1 bits (253), Expect = 5.0e-18 Identity = 76/230 (33.04%), Postives = 110/230 (47.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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