Lag0039707 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039707
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr2: 48665243 .. 48666214 (+)
RNA-Seq Expression	Lag0039707
Synteny	Lag0039707

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGAGGGCCATGGGTCTACGACAGAGCTCTGATATTGTTTGAAGAAATCAAAGGAGGAGAACGATACTCCCGCTTAAAATTCCAACACGCCTCCTTCTGGATACACTTCTTAGAATTGCCGAGAGTCTGCTTCAATAGAAAGTGGGCGGAAGCTCTTGGAAATGCGGTAGACAGGTTCGAACGAGTTGACTTTGATGCTGACGAATACGAAGTTGGAGGATCTATGAGAGTCAGAGTGAAAGTTGATGTCCAAAATCCCCTGAGGAGAGGGACGGTAATCAAAATAGGATCAAAAGCAGAGGAGGAATGGATCAAGATAAGATACGAGAAACTCCCCGACTTCTGCTATGGATGTGGGCGGTTGGGTCACCTGGCCAGGGACTGTAGCGACTTTGAAGTGAACAACAAAGGGGACCTCCCATATGGTCCAGAACTCAGGAAAGAAGCAATACCAAGAGTGAAAAGGAGTCCAGATGAAACAAAGAAAGACGAGAAAGGCAAAGACCGAGAAGAAAGGCTCGGCGGGCAAGACAGAAACAAGGAAGATCAAGGTGATAGAAGCCTTTTCAGAGGACATGAAACCAGCCCAGGCCAACCAAGCTGCCGGAAAGATAATCCGCCGGAAAATCAGTCCAGACACTTACCGGAGGTGAGGAAGAATAGGGCAGTCTCAACGGCTACTTTCAAACCCCAAGAAGCGTCAGAGGACATGATGATTGACCAATCTGCTTCTTCCTCGTTACTGGAAAAAAAGGGAAAAAGTACAGAAAAAGATGTCAGTAGAGGCAGCTACCAGACAAGACAAAAGAGAAGGAAAGAATGGAAATCGAAGCAAAAAGCAATGAGGATAGGAAAAGGAAAGGGCCCAAGTCAAACTCATGCTCCGAAAAGAACTTGGGCCAAAAAACTCAAAACTCAGAAAGGGGCCAAACAAGGATCCACTACGCAGACATGGAAAAAGATCTGA

mRNA sequence

ATGGACGGAGGGCCATGGGTCTACGACAGAGCTCTGATATTGTTTGAAGAAATCAAAGGAGGAGAACGATACTCCCGCTTAAAATTCCAACACGCCTCCTTCTGGATACACTTCTTAGAATTGCCGAGAGTCTGCTTCAATAGAAAGTGGGCGGAAGCTCTTGGAAATGCGGTAGACAGGTTCGAACGAGTTGACTTTGATGCTGACGAATACGAAGTTGGAGGATCTATGAGAGTCAGAGTGAAAGTTGATGTCCAAAATCCCCTGAGGAGAGGGACGGTAATCAAAATAGGATCAAAAGCAGAGGAGGAATGGATCAAGATAAGATACGAGAAACTCCCCGACTTCTGCTATGGATGTGGGCGGTTGGGTCACCTGGCCAGGGACTGTAGCGACTTTGAAGTGAACAACAAAGGGGACCTCCCATATGGTCCAGAACTCAGGAAAGAAGCAATACCAAGAGTGAAAAGGAGTCCAGATGAAACAAAGAAAGACGAGAAAGGCAAAGACCGAGAAGAAAGGCTCGGCGGGCAAGACAGAAACAAGGAAGATCAAGGTGATAGAAGCCTTTTCAGAGGACATGAAACCAGCCCAGGCCAACCAAGCTGCCGGAAAGATAATCCGCCGGAAAATCAGTCCAGACACTTACCGGAGGTGAGGAAGAATAGGGCAGTCTCAACGGCTACTTTCAAACCCCAAGAAGCGTCAGAGGACATGATGATTGACCAATCTGCTTCTTCCTCGTTACTGGAAAAAAAGGGAAAAAGTACAGAAAAAGATGTCAGTAGAGGCAGCTACCAGACAAGACAAAAGAGAAGGAAAGAATGGAAATCGAAGCAAAAAGCAATGAGGATAGGAAAAGGAAAGGGCCCAAGTCAAACTCATGCTCCGAAAAGAACTTGGGCCAAAAAACTCAAAACTCAGAAAGGGGCCAAACAAGGATCCACTACGCAGACATGGAAAAAGATCTGA

Coding sequence (CDS)

ATGGACGGAGGGCCATGGGTCTACGACAGAGCTCTGATATTGTTTGAAGAAATCAAAGGAGGAGAACGATACTCCCGCTTAAAATTCCAACACGCCTCCTTCTGGATACACTTCTTAGAATTGCCGAGAGTCTGCTTCAATAGAAAGTGGGCGGAAGCTCTTGGAAATGCGGTAGACAGGTTCGAACGAGTTGACTTTGATGCTGACGAATACGAAGTTGGAGGATCTATGAGAGTCAGAGTGAAAGTTGATGTCCAAAATCCCCTGAGGAGAGGGACGGTAATCAAAATAGGATCAAAAGCAGAGGAGGAATGGATCAAGATAAGATACGAGAAACTCCCCGACTTCTGCTATGGATGTGGGCGGTTGGGTCACCTGGCCAGGGACTGTAGCGACTTTGAAGTGAACAACAAAGGGGACCTCCCATATGGTCCAGAACTCAGGAAAGAAGCAATACCAAGAGTGAAAAGGAGTCCAGATGAAACAAAGAAAGACGAGAAAGGCAAAGACCGAGAAGAAAGGCTCGGCGGGCAAGACAGAAACAAGGAAGATCAAGGTGATAGAAGCCTTTTCAGAGGACATGAAACCAGCCCAGGCCAACCAAGCTGCCGGAAAGATAATCCGCCGGAAAATCAGTCCAGACACTTACCGGAGGTGAGGAAGAATAGGGCAGTCTCAACGGCTACTTTCAAACCCCAAGAAGCGTCAGAGGACATGATGATTGACCAATCTGCTTCTTCCTCGTTACTGGAAAAAAAGGGAAAAAGTACAGAAAAAGATGTCAGTAGAGGCAGCTACCAGACAAGACAAAAGAGAAGGAAAGAATGGAAATCGAAGCAAAAAGCAATGAGGATAGGAAAAGGAAAGGGCCCAAGTCAAACTCATGCTCCGAAAAGAACTTGGGCCAAAAAACTCAAAACTCAGAAAGGGGCCAAACAAGGATCCACTACGCAGACATGGAAAAAGATCTGA

Protein sequence

MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETSPGQPSCRKDNPPENQSRHLPEVRKNRAVSTATFKPQEASEDMMIDQSASSSLLEKKGKSTEKDVSRGSYQTRQKRRKEWKSKQKAMRIGKGKGPSQTHAPKRTWAKKLKTQKGAKQGSTTQTWKKI

Homology

[Close]

BLAST of Lag0039707 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 132.5 bits (332), Expect = 6.5e-27
Identity = 62/146 (42.47%), Postives = 88/146 (60.27%), Query Frame = 0


Query: 4   GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFER 63
           GPW +DRALI+ +      +   + F++ S W+HF +L   C N+  A  LGNA+  FE 
Sbjct: 99  GPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFED 158

Query: 64  VDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGCGRL 123
           V+ +A+ +  G  +RVRV+ DV  PL RG  + +       WI I+YE+LPDF Y CGRL
Sbjct: 159 VESNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRL 218

Query: 124 GHLARDCSDFEVNN-KGDLPYGPELR 149
            H+ +DCSD  V++   +L YGP LR
Sbjct: 219 DHILKDCSDCCVDSVSKNLQYGPWLR 244

[Close]

BLAST of Lag0039707 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-25
Identity = 71/192 (36.98%), Postives = 101/192 (52.60%), Query Frame = 0


Query: 1   MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDR 60
           M  GPW +D+ALI+ ++    +  S L+F   +FWIH  +LP    N+  A  LGNA+  
Sbjct: 95  MKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGN 154

Query: 61  FERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGC 120
           F  VD +   +  G S+R+RV +D+  PLRRG  I I       WI I+YE+LPDFCY C
Sbjct: 155 FVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFC 214

Query: 121 GRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKD--REER 180
           G +GH + DC       + +++    YGP L      R   S    +K  KGK   RE+ 
Sbjct: 215 GVIGHSSHDCDARYLAAQDDSRATSEYGPWL------RFVGSKAGAQKGRKGKSPAREDS 274

Query: 181 LGGQDRNKEDQG 187
            G    N +++G
Sbjct: 275 CGSSSMNSKERG 280

[Close]

BLAST of Lag0039707 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 125.9 bits (315), Expect = 6.1e-25
Identity = 66/199 (33.17%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 1   MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDR 60
           ++GGPW++D+ L++  E  G E+ + L+F++  FWI    LP  C NR+    LG  V +
Sbjct: 94  LEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQ 153

Query: 61  FERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGC 120
            + +D       VG  +R+RV +DV NPL+RG  + +G   +   + I YE+LP+FCY C
Sbjct: 154 VKEIDAGESGECVGQFIRIRVLIDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYC 213

Query: 121 GRLGHLARDC--SDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDREERLGGQ 180
           G++GHL RDC  +  E+ +     +GP +R  A+ R +      KK+     RE      
Sbjct: 214 GKIGHLVRDCPLNTKEITSSSSFKFGPWMR--AVSRTRSKGTGEKKNSPEGSREGGSSDT 273

Query: 181 DRNKEDQGDRSLFRGHETS 198
             N   +G      G ++S
Sbjct: 274 LENLRVKGSTKWNMGKDSS 290

[Close]

BLAST of Lag0039707 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-24
Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 0


Query: 1   MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDR 60
           +  GPW +D+ L++  E+    + S ++     FW+H   LP V  N+K  E +GNAV +
Sbjct: 93  LSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQ 152

Query: 61  FERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGC 120
           F  +D++      G +MR+RV +DV+ PLRRG  + + S AE  W+  +YE+LP +CY C
Sbjct: 153 FIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKLAL-SSAEPIWVDFKYERLPIYCYFC 212

Query: 121 GRLGHLARDCSDFEVNNKG----DLPYGPELRKEAI 153
           GRLGH  R+C D   +  G     L YG  LR + I
Sbjct: 213 GRLGHSERECDDKLSSADGSRVDSLQYGAWLRMDNI 247

[Close]

BLAST of Lag0039707 vs. NCBI nr
Match: KAF5469007.1 (hypothetical protein F2P56_013112 [Juglans regia])

HSP 1 Score: 122.1 bits (305), Expect = 8.8e-24
Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 4   GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFER 63
           GPW +D+ L+L +E  G  +   L   H  FW+   +LP +  N    + +G+ +  F  
Sbjct: 96  GPWAFDKQLVLLKEFDGLVQAKGLTIVHVPFWVRIYDLPLMARNSYVGKLIGSLIGEFLE 155

Query: 64  VDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGCGRL 123
           VD    E+E G  MRVRV +D+  PL+R   +K+G +    W+++ YE+LPDFCY CG L
Sbjct: 156 VDLAKGEFEWGEFMRVRVLLDISTPLQRRKKLKLGDE-NYCWVRLVYERLPDFCYQCGLL 215

Query: 124 GHLARDCSDF-EVNNKGD-LPYGPELR 149
           GH  R+C++F  VN + D LPYG  LR
Sbjct: 216 GHSLRECAEFISVNAEIDQLPYGAWLR 241

[Close]

BLAST of Lag0039707 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-27
Identity = 62/146 (42.47%), Postives = 88/146 (60.27%), Query Frame = 0


Query: 4   GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFER 63
           GPW +DRALI+ +      +   + F++ S W+HF +L   C N+  A  LGNA+  FE 
Sbjct: 99  GPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFED 158

Query: 64  VDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGCGRL 123
           V+ +A+ +  G  +RVRV+ DV  PL RG  + +       WI I+YE+LPDF Y CGRL
Sbjct: 159 VESNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRL 218

Query: 124 GHLARDCSDFEVNN-KGDLPYGPELR 149
            H+ +DCSD  V++   +L YGP LR
Sbjct: 219 DHILKDCSDCCVDSVSKNLQYGPWLR 244

[Close]

BLAST of Lag0039707 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.8e-26
Identity = 71/192 (36.98%), Postives = 101/192 (52.60%), Query Frame = 0


Query: 1   MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDR 60
           M  GPW +D+ALI+ ++    +  S L+F   +FWIH  +LP    N+  A  LGNA+  
Sbjct: 95  MKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGN 154

Query: 61  FERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGC 120
           F  VD +   +  G S+R+RV +D+  PLRRG  I I       WI I+YE+LPDFCY C
Sbjct: 155 FVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFC 214

Query: 121 GRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKD--REER 180
           G +GH + DC       + +++    YGP L      R   S    +K  KGK   RE+ 
Sbjct: 215 GVIGHSSHDCDARYLAAQDDSRATSEYGPWL------RFVGSKAGAQKGRKGKSPAREDS 274

Query: 181 LGGQDRNKEDQG 187
            G    N +++G
Sbjct: 275 CGSSSMNSKERG 280

[Close]

BLAST of Lag0039707 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-25
Identity = 66/199 (33.17%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 1   MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDR 60
           ++GGPW++D+ L++  E  G E+ + L+F++  FWI    LP  C NR+    LG  V +
Sbjct: 94  LEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQ 153

Query: 61  FERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGC 120
            + +D       VG  +R+RV +DV NPL+RG  + +G   +   + I YE+LP+FCY C
Sbjct: 154 VKEIDAGESGECVGQFIRIRVLIDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYC 213

Query: 121 GRLGHLARDC--SDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDREERLGGQ 180
           G++GHL RDC  +  E+ +     +GP +R  A+ R +      KK+     RE      
Sbjct: 214 GKIGHLVRDCPLNTKEITSSSSFKFGPWMR--AVSRTRSKGTGEKKNSPEGSREGGSSDT 273

Query: 181 DRNKEDQGDRSLFRGHETS 198
             N   +G      G ++S
Sbjct: 274 LENLRVKGSTKWNMGKDSS 290

[Close]

BLAST of Lag0039707 vs. ExPASy TrEMBL
Match: A0A6P9EH14 (uncharacterized protein LOC108984200 OS=Juglans regia OX=51240 GN=LOC108984200 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.3e-24
Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 4   GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFER 63
           GPW +D+ L+L +E  G  +   L   H  FW+   +LP +  N    + +G+ +  F  
Sbjct: 96  GPWAFDKQLVLLKEFDGLVQAKGLTIVHVPFWVRIYDLPLMARNSYVGKLIGSLIGEFLE 155

Query: 64  VDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRYEKLPDFCYGCGRL 123
           VD    E+E G  MRVRV +D+  PL+R   +K+G +    W+++ YE+LPDFCY CG L
Sbjct: 156 VDLAKGEFEWGEFMRVRVLLDISTPLQRRKKLKLGDE-NYCWVRLVYERLPDFCYQCGLL 215

Query: 124 GHLARDCSDF-EVNNKGD-LPYGPELR 149
           GH  R+C++F  VN + D LPYG  LR
Sbjct: 216 GHSLRECAEFISVNAEIDQLPYGAWLR 241

[Close]

BLAST of Lag0039707 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.1e-23
Identity = 60/174 (34.48%), Postives = 98/174 (56.32%), Query Frame = 0


Query: 1   MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDR 60
           M GGPW +DRALI   E  G     +  F H SFW+   ++P +C ++  A  LG  + +
Sbjct: 94  MVGGPWHFDRALIGLTEPTGIGDIKKQDFSHVSFWVQIHDVPIMCMSKDMAAELGKVIGK 153

Query: 61  FERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK---AEEEWIKIRYEKLPDFC 120
            E V+ DA     G  +R+R+ VD+  PL++  +I++  +   A++  +++ YE+LPDFC
Sbjct: 154 VEEVETDAAGECFGQFLRLRISVDITKPLKK--IIELEQEEEDADDIPMRVMYERLPDFC 213

Query: 121 YGCGRLGHLARDCSDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDR 172
           + CGR+GH  R+C  ++  +K +L YGP L+   +        E  K  +G+DR
Sbjct: 214 FCCGRIGHQYRECFYYKSQSKDELAYGPWLKANTVA-------EKLKQGRGRDR 258

The following BLAST results are available for this feature:

BLAST of Lag0039707 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132681.1	6.5e-27	42.47	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_022156185.1	1.6e-25	36.98	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
TXG54013.1	6.1e-25	33.17	hypothetical protein EZV62_019269 [Acer yangbiense]	[more]
XP_028122006.1	1.8e-24	38.46	uncharacterized protein LOC114319195 [Camellia sinensis]	[more]
KAF5469007.1	8.8e-24	40.14	hypothetical protein F2P56_013112 [Juglans regia]	[more]

BLAST of Lag0039707 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0039707 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BSZ1	3.2e-27	42.47	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1DU55	7.8e-26	36.98	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5C7H9Y2	3.0e-25	33.17	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926...	[more]
A0A6P9EH14	4.3e-24	40.14	uncharacterized protein LOC108984200 OS=Juglans regia OX=51240 GN=LOC108984200 P...	[more]
A0A1S8AC25	8.1e-23	34.48	CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1	[more]

BLAST of Lag0039707 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 2..81 e-value: 6.2E-8 score: 32.3
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 83..131 e-value: 2.0E-14 score: 53.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..271
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 3..229
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 3..229
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 117..130 score: 10.476859
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 114..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039707.1	Lag0039707.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding