Lag0039693 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCATCAACACCACCTTCGCCGAAGTAGTTTTCAGAAATTTGGTGGCGTTTGAAGCAGCAACAAAACTAAACCCACCACACTTGAGCTATTACGTAGCATTGATGAGTGGGTTAATAACCACAGCCAAGGATGTCAAGATATTGAAGCAACAATACATCATTGACCACGAATCAGGAAGTGACGAAGAGGTGGTGAAAGTGTTTGGTGGGCTAAGAAATGTCTTGGAGCTTCACCAGCAGAGTTGTAACTCTAGTACGATCATGAAGATGGCCGAAATTCAAATCGTTAAAGACATCAATGGCTATTACGAAAGCTGCTGGACGGTGAAACTCAAAAGATTCATTAAGAGATATATTTATCCAGTAATGAAGATGGTATTTCTTATTCTTGTGATTTTGCTTATTGTTGTCGTTGTTGTACGCACGTTTTGTGGTTGGTTTGGTTGCTCTGGAATTTTGTATGTGGTTTCTGGTGTGTGA ATGATCATCAACACCACCTTCGCCGAAGTAGTTTTCAGAAATTTGGTGGCGTTTGAAGCAGCAACAAAACTAAACCCACCACACTTGAGCTATTACGTAGCATTGATGAGTGGGTTAATAACCACAGCCAAGGATGTCAAGATATTGAAGCAACAATACATCATTGACCACGAATCAGGAAGTGACGAAGAGGTGGTGAAAGTGTTTGGTGGGCTAAGAAATGTCTTGGAGCTTCACCAGCAGAGTTGTAACTCTAGTACGATCATGAAGATGGCCGAAATTCAAATCGTTAAAGACATCAATGGCTATTACGAAAGCTGCTGGACGGTGAAACTCAAAAGATTCATTAAGAGATATATTTATCCAGTAATGAAGATGGTATTTCTTATTCTTGTGATTTTGCTTATTGTTGTCGTTGTTGTACGCACGTTTTGTGGTTGGTTTGGTTGCTCTGGAATTTTGTATGTGGTTTCTGGTGTGTGA ATGATCATCAACACCACCTTCGCCGAAGTAGTTTTCAGAAATTTGGTGGCGTTTGAAGCAGCAACAAAACTAAACCCACCACACTTGAGCTATTACGTAGCATTGATGAGTGGGTTAATAACCACAGCCAAGGATGTCAAGATATTGAAGCAACAATACATCATTGACCACGAATCAGGAAGTGACGAAGAGGTGGTGAAAGTGTTTGGTGGGCTAAGAAATGTCTTGGAGCTTCACCAGCAGAGTTGTAACTCTAGTACGATCATGAAGATGGCCGAAATTCAAATCGTTAAAGACATCAATGGCTATTACGAAAGCTGCTGGACGGTGAAACTCAAAAGATTCATTAAGAGATATATTTATCCAGTAATGAAGATGGTATTTCTTATTCTTGTGATTTTGCTTATTGTTGTCGTTGTTGTACGCACGTTTTGTGGTTGGTTTGGTTGCTCTGGAATTTTGTATGTGGTTTCTGGTGTGTGA MIINTTFAEVVFRNLVAFEAATKLNPPHLSYYVALMSGLITTAKDVKILKQQYIIDHESGSDEEVVKVFGGLRNVLELHQQSCNSSTIMKMAEIQIVKDINGYYESCWTVKLKRFIKRYIYPVMKMVFLILVILLIVVVVVRTFCGWFGCSGILYVVSGV Homology
BLAST of Lag0039693 vs. NCBI nr
Match: XP_038889519.1 (putative UPF0481 protein At3g02645 [Benincasa hispida]) HSP 1 Score: 224.9 bits (572), Expect = 4.8e-55 Identity = 118/154 (76.62%), Postives = 132/154 (85.71%), Query Frame = 0
BLAST of Lag0039693 vs. NCBI nr
Match: XP_008459652.1 (PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo]) HSP 1 Score: 222.6 bits (566), Expect = 2.4e-54 Identity = 118/155 (76.13%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Lag0039693 vs. NCBI nr
Match: KAE8649012.1 (hypothetical protein Csa_008980 [Cucumis sativus]) HSP 1 Score: 220.7 bits (561), Expect = 9.1e-54 Identity = 116/154 (75.32%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of Lag0039693 vs. NCBI nr
Match: XP_011656112.2 (putative UPF0481 protein At3g02645 [Cucumis sativus]) HSP 1 Score: 220.7 bits (561), Expect = 9.1e-54 Identity = 116/154 (75.32%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of Lag0039693 vs. NCBI nr
Match: KAG6592378.1 (putative UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 211.5 bits (537), Expect = 5.5e-51 Identity = 113/154 (73.38%), Postives = 128/154 (83.12%), Query Frame = 0
BLAST of Lag0039693 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10 Identity = 42/142 (29.58%), Postives = 78/142 (54.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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