Lag0039649 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039649
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr2: 47786203 .. 47788190 (-)
RNA-Seq ExpressionLag0039649
SyntenyLag0039649
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGTAGAGCCGGAAGATGTGTTGGGCATGAAGTGGAATACAGAAAAGACCGCGAGGAATGGTTGGTCAAATGGGAAAATCGTCCCTATTGTGATGCTACTTGGGAAGAAGCTGCTGTCATAAACGTCAATTTCCAGATTTTCACCTTGTGGACAAGGTGAGTCTTCAACCCGGGGGTATTGTGAGGCCACCAATAGTGAAAACATATATGAGAAGGGGCAAAATGGGAAAAGACAATGAGGAAGGAAGCAACATGGCAGTCAGTGGGGACCGTTAGCTGAGGATCGTGCGTGTACGGCCTGAGAGTGGTGTGAGAGTTTGTTTTTGTAGAGGGAGCAGCTGTAGCTTTCTCATTATGGAAATTGTGGCTTGTTAGTCTTTGGGAGAGGAACCAGGGCTCTCGAATCGCCTGGGATATCTTTATTTTCTGTTGTTGGTTGTCTTGTTGTTTGGGTTATTTGTGAGAACTATTACTGAGTTGGTGACTGGCCTAACGGATTACCAATAGAACAGTGCCAAACTTCTATCCTATTTGTGTTGTTGTGTGGTTATTCTCCATTTTGCAGGAAATTCGTGTTGGATTCCCAACAGAGTCGTTCCATGAGGTACTTTTACCATCGCCCACCTTTATCAATATGTTGGAATAAACCATATGCTTCACACTATCAATAGAGTTCCATGGTCCTTTGGATGAGTTTAAGGTTTTAGCACCCGACTTTAGGTTGAAGTGAATGGTCCCGGATTTAGAAGCAATACCTAATGCCAAAGAGCTTCCTTCTCTATATGAAAACGCCAAATCCATTTAGCCAGAAGAGATGAGTTTTTTTGTTGAATTCCCATTATACCAATGCCACCTTCCTCGATAGGTGCTTTAACCTGATCCCATCTCAAAAGATGGAGTCCTTTTGAGTCATTTTTTCCCTTCCATAAAAAATTCCGAAAAAGCTTTTTAATCTTGTTAATCACCTTTGTAGGGGCCTTAAAAAGGGATAGATAATAAATGGGAAGGTTAGACAATGTGGCCTATGTAAGTGTAAGTCTAACACCTTTAGAAAGGTGTGTGGAGCCCCAAGATTAAAGCCTTCTCTCGATTTTCTCGATCATTGGATCCCAAAAGGAAGAAGATTTTGGTTTCCCATTCAGCGGTAATCCAACGTAAGTAATGGCTATCCATAGATTTTAAACCAAACCGACCAGCAAGGATGGATAGCATCTGTGAGTCAATATCAATGCCCATAAATTCAGACTTGTGGCAATTAATGTTCAGACCGAATACTTCCTCGAAAAGTTTAACAACTTTGAAAAGATTATCAAGGTGGGTGTCATTGTGGGTGGAGAATAGGATAATATCGTCTGCAAATTGTAAGGGGGTGTTTGGGGAAAGGGAATGTAATCTGGATTACGGGGAATCTGGATTACTGGGAATCCTTGATTGTAATTTGGATTACTAGGAATCCTAATGCCTGTGTTTGGTGCGCTGTAATTGGGTTGTATTTGGTCTTGGATTGCAGGGTTGGATTTGGGCTGGAATCGTAATTGTTGACGTGGCACTAATTTTTTTAATAAAAAAAATAATGTTTTAATTATTGAAAATAAAAATATATTAAAATAATAAAAAATATATTATTTTAAATTTTTTTTATTTCTTCTCTCCACTTTCTTCTTCTTCTTCTTCTTCATAATCAGCACACCACCAACCTCTTTTTCTCTTCTTTTCTTTTTTTTTCTTTTTGTTTTACTCTCCCTCCGTTTCTGACATTGCCGGCTAGCCCCCCATCTCCAGTTGTCTTCTCCGGCAAGCAGAGGCGGCGCAGCAGCAACATTTCACAAGAAGAAGAACCTCTCCGATCTGGCGCAACGGACTGAGCTCGAGTCCTCCGATTTGAACTTGATTAGAGGCGAAGATGAACAGAATCGCCATCAAGAAGATGAACAGAATCTAATAGAATTGAAACAAGAATCGAGCAAGAATTGGATGAATTGA

mRNA sequence

ATGGAGAGTAGAGCCGGAAGATGTGTTGGGCATGAAGTGGAATACAGAAAAGACCGCGAGGAATGGTTGGTCAAATGGGAAAATCGTCCCTATTGTGATGCTACTTGGGAAGAAGCTGCTGTCATAAACGTCAATTTCCAGATTTTCACCTTGTGGACAAGGAAATTCGTGTTGGATTCCCAACAGAGTCGTTCCATGAGACTTGTGGCAATTAATGTTCAGACCGAATACTTCCTCGAAAAGTTTAACAACTTTGAAAAGATTATCAAGTTGTCTTCTCCGGCAAGCAGAGGCGGCGCAGCAGCAACATTTCACAAGAAGAAGAACCTCTCCGATCTGGCGCAACGGACTGAGCTCGAGTCCTCCGATTTGAACTTGATTAGAGGCGAAGATGAACAGAATCGCCATCAAGAAGATGAACAGAATCTAATAGAATTGAAACAAGAATCGAGCAAGAATTGGATGAATTGA

Coding sequence (CDS)

ATGGAGAGTAGAGCCGGAAGATGTGTTGGGCATGAAGTGGAATACAGAAAAGACCGCGAGGAATGGTTGGTCAAATGGGAAAATCGTCCCTATTGTGATGCTACTTGGGAAGAAGCTGCTGTCATAAACGTCAATTTCCAGATTTTCACCTTGTGGACAAGGAAATTCGTGTTGGATTCCCAACAGAGTCGTTCCATGAGACTTGTGGCAATTAATGTTCAGACCGAATACTTCCTCGAAAAGTTTAACAACTTTGAAAAGATTATCAAGTTGTCTTCTCCGGCAAGCAGAGGCGGCGCAGCAGCAACATTTCACAAGAAGAAGAACCTCTCCGATCTGGCGCAACGGACTGAGCTCGAGTCCTCCGATTTGAACTTGATTAGAGGCGAAGATGAACAGAATCGCCATCAAGAAGATGAACAGAATCTAATAGAATTGAAACAAGAATCGAGCAAGAATTGGATGAATTGA

Protein sequence

MESRAGRCVGHEVEYRKDREEWLVKWENRPYCDATWEEAAVINVNFQIFTLWTRKFVLDSQQSRSMRLVAINVQTEYFLEKFNNFEKIIKLSSPASRGGAAATFHKKKNLSDLAQRTELESSDLNLIRGEDEQNRHQEDEQNLIELKQESSKNWMN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..149
NoneNo IPR availableGENE3D2.40.50.40coord: 5..48
e-value: 9.5E-7
score: 30.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..146
IPR023780Chromo domainPFAMPF00385Chromocoord: 14..45
e-value: 3.3E-6
score: 26.9
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 15..44

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039649.1Lag0039649.1mRNA