Lag0039599 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039599
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotran_gag_3 domain-containing protein
Location	chr2: 47026568 .. 47032856 (+)
RNA-Seq Expression	Lag0039599
Synteny	Lag0039599

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTCAAGGATTATTTAACTTGCAAGAAAGTGCATAAGGCATTGAAGGAGAAACCGAAAGGGATGACAGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAACCATAAGGATGTGTTTTTCAATGGATATGACAAGTCTAGTAGCCCATGAGACAACTGCAGTCAAGTTGATGGAAGCGCTTACAAACAAGTATGAAAAACCCTCTGCAAATGATAAGGTCTACCTAGTTAAGAAGTTTTTCAATATGCAAATGTGTGAGGATGCTTCTATGAATTCCTATATTAATGAGGTTATCACTTTGATTAATTATTTAAAATTTGTTAAGATAGAGTTTCTAATGAGGTGAATGCTATTCAGTTGTTAACATCTTTACCTGATAGTTGGGAAACGATGAAGACAGCAGAGTCTAATTCAACTGGAAATAACACTTTAAAATTTTCAGAAGTTTGTGATATAGCCATAGCTAAGGAAATTCGTAGGCAGGGTAGTAATAAAGAGTCTACAGTAGGGTCAACTTTGGTTATGACTAAAGGGAAAGATAAGGTTGATGAAGAAAATGAATCGAGTAACAGTAGGAAAAAGTGGAAAAGTAGGAATGAGGTAGAATGTTTTTACTGCCATAAGAAAGGTCAATTCAAGAGTCAGTGTAGGAAATTTAAAGAGGATCAGAAAAGAAAACCAAAGGCAAATGTAGTGGTGAAGGTTGTCTTAGTTTGTGTTGAGAGTGACATAAAATATAGTAACCACTCATCAGATTGGATATTAAACAGTGCAGCTTCTGTTCACATAGCTTCAAATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCATGGCCTAGTGAGGATGGGGAATGATAGAACCTCCAAGACTAGAGGGATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGGTATATTGGTACTACGAGATGTCAGGATCGTGCCTAATATCAAGATGAATCTTATTTCTATTGGTAAGTTGGCAGATGATGGTTACATGTGTGAGTTTGGTAGTCGCCAGTGTAAACTCAAGTTCGGATCCCAGGTAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAGATGTCAGTTGAATGTTGCCAAAGGTTCAAAGAGACAGTGGATGCCGGTTAAAGCTACAGATGGTAATTGTAGAGGTACAGCTGAGCCAGCATCAAGGATACCCAATTTCGATCAGTCCGATCAAGATCCTTCAGTTCAGATACAATTGGGAAGTCCAGGAGAGAAAGTTGATGGCTATCATGAATCCCCAGTTGTCAGACGCTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTTGAGGCATCAAAGTGGAAGGCCAGAGCAGTTGCTAAGGTCAAAGGTCTGGTCTCTAGCTTGGTAATAGGTTTGAATAGAGGATTCAAGCCATTCTCAGAGTGCATATTCTTCAAGAACAATTGTTCGGGTTGGAAGAAGATGACAGGTGACACCACTTAGTTGAAGTGAGAATACGTGTCTGTATTTTTCGTCTGGGAGACAGGTCCACGTAGGTAGCCCATACCTCAGGGCTAGCACAGACGAGCTACAGTTATATTCTGATAGTTGCCTATTTTTGTGAGGTTGTTGTTTTTCAGGTATTTTGAGCCTTGGAGTTTACCAAGAAGATCAGAGATAACAGTTGTAGTGGGAGTAGATCCTTGGAGTTTGCCAAAATGTTTAGAGTTTTGTTGCAATGGGAGAAGAGATCGTTGTTTTGTCTCCAAGTGGGAAATTGTTGGAATAGTGGAGACAAAACTCTCCCTTAATTTTCCGTGTGAAAGAAAATAAGGGTTAATGGGCTTGGCCCATTACTTAATTAGGTTTCACTTTATATATACATATATGTGTAGTGAGTGGCTGGAAATCGGAGGAGCAGTCGGAAGCAAATTTGAAGATTTTGTTTTGGTGCGACAGTGCTTTCCTTGAGTGAAGGCAGGTATTTTGAGGAAATTAGATTTATTCTCTTGATTGGGTTGAGGGTTTTGTGTATTTGTTTATCCCAAGCTATCGGGTTGTGATACTTGGAAGTCAATAGCTATTGTTGGGCTATTGAGAGTTAGTTTGTGGTGTTATTGAAAGCTTCCTGTAATCTCTCAAATTCTAGTAGAACCTGTAGTTGCAGAAGACTGGACGTAGCCCCGAGCTTGGGGTGAATCAGTATATTTTTCGGTGTTGTTTTCTTTTCCTTATCTCTTTTATTATTTTCGTGACTATTATTTTTGGCTTAAATGTGGAACGGGAGATAGTTATAATATTATTGATTGTCGTCATAATATTATTATTATTTGTATTCCGCATTTTTCTCCCAACAATTATAAATACACATTCTCTGTACTTTATTTCTCAATTAATAAGATAACACTTTCACTTGAGTTTGAGTGAAAGATTTCATGGTATAAGAGTAGTACTGACACACGTCGTTTCTCTAACTTTTTTTTTCAATCCTCTTCATTCTTTTCTAAAATTCTTGCGATTGTGATGGCGCATCTACAGAGCAATCTCCTTTGAAAGATGCTCACTCTCCTATTTTTCTTCTCACCAATATTTGCAATCTCATCTCTATTCGTCTTGATTCATCAAATTATGTCCTCTGGAAATTTCAATTTTCTTCTAAGTTGAAGGCTCACAAATTGTTTGGTTTTGTTGGTAGATCTAACAAAGCACCAACCGAATTTCTTCAATCTACGTTTGAATCGGAATCCCTGTCTTCTTCAACTCGTACTCTTAATCCTCTGTATGATGACTGGTGTGCCAAGGATCAAGCGTTGATGACTCTGATAAACACTACTCTCTCTACCAAAGCCCTAACTTATATTGTTAGTTGCAAATCTGCCAATGAGGTATGAGAGTCTCTTAAAAAACACTATTCCTCCAACTCTAGATCTAATATTGTGAATTTGAAGTCTAAACTTCAATCGATTACTAAGAAAGCGGATGAATCAATTGATGCTTATGTTAGACGAATTAAGAAGATTGAGGATAAACTTGTTAATGTTTCTTCAGTTGTAAACGATGAAGACTTACTGATCTATGCTTTGAATGGTCTTCCTCTTGAGCATAATATCTTTCGAACGTCAATGAGGACTTGCTCACAACCAGTGACATTTGATGAACTCCATGTCTTGATGAAATCTGAAGAGTTTGCTTTAGCCAAGCAATCTAAACGAGAAGATTTGTCGATTCAGCCTACTGCTATGGTTGCGAATCAGTCAACTCATCGGAATCAGTTTGTTACCTTTGGATATTCCAATTTCTTTCGAGGACGTGGTTGAGGAAGAAATTCTGGACGTGGTCGATTTTCTGGAAATTCTTCTCAGAATTTGAATGGTCGTGGACATGGTTTTGTTGGTCAATCCTCTGGTAAGTCTTCTGTTTCAGCTGGTGCTAAAATGAATTGTCAAATTTGCAATCGTCCTGGTCACATGACTCTTGACTGCTACAATAGGATGGATTATCACTTTGAAGGTCGTCATCCTCCTCCACAACTGGCTGCCATGGTTGCTACACAAAATTCATAGTATATGAATTCTTAAGGGACTTCTTCTCCCACTTGGTTGGCTAATTCTTGCTGCAACGCTCACATTACTGCTGATCTTGGAAATTTGGCTATTTCGAATGAATATAATGGTGATGAGAACATAGTTGGTGGTAGTGGTTATTCTCTCCCCATTTCTCATACATGTTGTGGTTCTTTTCCCTACAAATCCAATTTTGCCTTTGGTTATTTCTACTAATCTCTTGTCTGTTCATCAATTTTGTGTTGATAATAATTGTATCATTTTGTTTGATTCTGACATATTTGTCATTCAAGACAAACTTACAGGCCAAACTTTGTTCGAAAGGACCTAGTGTTAATGGTCTTTATCCCATTACACCTTATTCCTCTAGCATTTACTCTTATCTGGGAGGCTCACCCACTGCTCATGTTGGAGTCAAGTCTCCTTCTACTCTTTGGCACAACTGGTTAGGCCATCCTCATCTTCAAGTCCTTAATTCCGTTCTGAATTTTTTGCATTTACCTACTTGTAATAAGTCTCCATGTGTTTGTGAATATTGTCTCTATGGAAAAATGCACAGGCTGTTTTTTTCGCATTTTCATTCCCTTTCTGTGTATCCCTTACAGCTTGTTCACAGTGATGTATGGGGTCCTGCCCCTGAAATTTCAATAAATGGATACAAAATACTATGTGTCTTTTGTTGATGATCTTACTAAATATACATGGTTTTTCTCTATTGCTAAAAAATATGATGTTATTGCTAACTTTCAAAAGTTTAAGCCTTTGATAGAAAACCAACTTTCTCTCGTATTCGAACTCTTAGAACTGATGGGCGAGGTGAATTTGTTAACCAAAATCTGTCCTCTTATCTTCAAACCCATGGCATCTTTCATCAAAAGTCTTGTGCCTATACTCCTGAACATAATGGAGTTGTCGAGAGAAAACATCAACATATTGTTGAGGTTGCCTTATGCCTTATGACTCATGCTTCTATTCCTATTTGTTTTTGGTCCTATGCATTTTTTGTTGTTGTTTTTCTTATTAATCGCCTTCCTACTTCCCTTTTGAATAACAAATATCCTTTTGAATGTTTGTTTCATCGTCCTTCTGACTACAAACATCTAAAGGTATTCAGGTGTGCTTGTTATCCTTTGCTCAAACCATATAATACTCATAAACTTCAACCCCGCACTTCTCAATGTGTCTTTCTTGGTTATCCCTTGTGGTATAAAGGGTATTTGTGTTACAACATGAGCATGAGTAAGCTTTTTTGTCTCTTGCCATGTTCTGTTTGATGAAACTGTCTTTCATTTCTCTTCTACTTCGTCTACTTCACCTAATTCTTCTTCATATACGTCTACTTCATCTTTACCCTCTTATTCATTGTCTATCCCTTTGCCTTTACTTTTATCTTCTCCATCATCTACTTCTTTACCGTCATCTCCCTCTGTTCCACAACCTTGTACTGATAATTTGGTGTTTGAATTACCTCATGCTAACACTGTTACACCATCTAGTAATGGTGCTAATGTTGAGCCAGCTTCTAATCTTGGTAGTCATGTTGAGCACATTACTAGTAGTGGTGTTTCAACACCTTGTTCTTCAACTCAACCTTCCTCCAATGTCAAAAATACTCATGCTATGAAGACACGTTCAAAGTCTGGTATTTCTAAGCAAAAAGAGTTTGTTGCTGCCCACCACTTTACCAACTTCTATTCCTGATCTTGAACCATCCTCTTATACTCAAGCTTCTAAACATTTAGTGTGACAAAATGTTATGGCCGAAGAATATGCAACATTGATGAAACAAGGCACTTGGACTCTAACCACTTTATCTCCTGGAAAGAGTGCCATAGGATGTAAATGAGTTTATAGGATCAAAAGACACCTTGAATGGCAGTGTTGCTTGTTATAAAGTCTAACTCGTTGCTAAGGGATATCATTAAGAAGAAGATATTGATTATGATGAGACGTTTAGTTCTGTTGTTAAGAAACCCACTGTTCGTATTATTCTTTCATCACTTGCTGCACATTTTGGCTGGAAGTTGTGGCAGCTTGATGTGAAAAACACTTTTTTTCATGGTGACCTTCGTGAAGAAGTGTATATGTAGCAGCCTCAAGGGTTTGCTAATGGTTCCAATCTCGTTTGCAAACTTCTTAAATCGCTCTATGGCTTAAAGCAGGCGCCACAGGCATGGTTTGCTAATTGTTCCAATTGTCTCAGTTTATGCATTCACCTTCGCTTTGTCATTTGTCTGCGGCAAAACGGGTCTTAAGATATCTTCAGGGCACGACATTTAAGGGTCTGTTGTTCAAGAAATCAGCTTCAGGCCTTGTTTTAAATGCTTTTTCGGACTCTGATTGGGTTGGCAGTGTGTTGGATAAAAGGTCTACTACAGGTTTCATCATTTTTCTTGGTGATAATCCTATTATGGGTTGCTAAAAAGCAGTCTACTGTGTCACGAAGTTCTACAGAGGTACCAGGCTTTGGCTACTACTGCTGCTGATTTGTTTTGGTTACGTCAGTTACTTAAAGATTTACATGTTTTTGGTCGTTATCATCCTTATATCTGGTGTGATAATTAGTCAGCTATTCAATTGGCTCATAACACTGTTTTTCATGGTCGTACAAAGCATGTTGAAGTCGACTATCACTTTGTTCATGAGTGTGTTGTTCATCAGGATGTTCTGTTGAAATATACATCTACTCAGTCTCAATTTGTTGATGTTTTTACAAAACCTTTGACCACAGATCAATGA

mRNA sequence

ATGCAAGTCAAGGATTATTTAACTTGCAAGAAAGTGCATAAGGCATTGAAGGAGAAACCGAAAGGGATGACAGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAACCATAAGGATGTGTTTTTCAATGGATATGACAAGTCTAGTAGCCCATGAGACAACTGCAGTCAAGTTGATGGAAGCGCTTACAAACAAGTATGAAAAACCCTCTGCAAATGATAAGTTGTTAACATCTTTACCTGATAGTTGGGAAACGATGAAGACAGCAGAGTCTAATTCAACTGGAAATAACACTTTAAAATTTTCAGAAGTTTGTGATATAGCCATAGCTAAGGAAATTCGTAGGCAGGGTAGTAATAAAGAGTCTACAGTAGGGTCAACTTTGGTTATGACTAAAGGGAAAGATAAGGTTGATGAAGAAAATGAATCGAGTAACAGTAGGAAAAAGTGGAAAAGTAGGAATGAGGTAGAATGTTTTTACTGCCATAAGAAAGGTCAATTCAAGAGTCAGTGTAGGAAATTTAAAGAGGATCAGAAAAGAAAACCAAAGGCAAATGTAGTGGTGAAGGTTGTCTTAGTTTGTGTTGAGAGTGACATAAAATATAGTAACCACTCATCAGATTGGATATTAAACAGTGCAGCTTCTGTTCACATAGCTTCAAATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCATGGCCTAGTGAGGATGGGGAATGATAGAACCTCCAAGACTAGAGGGATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGGTATATTGGTACTACGAGATGTCAGGATCGTGCCTAATATCAAGATGAATCTTATTTCTATTGGTAAGTTGGCAGATGATGGTTACATGTGTGAGTTTGGTAGTCGCCAGTGTAAACTCAAGTTCGGATCCCAGGTAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAGATGTCAGTTGAATGTTGCCAAAGGTTCAAAGAGACAGTGGATGCCGGTTAAAGCTACAGATGGTAATTGTAGAGGTACAGCTGAGCCAGCATCAAGGATACCCAATTTCGATCAGTCCGATCAAGATCCTTCAGTTCAGATACAATTGGGAAGTCCAGGAGAGAAAGTTGATGGCTATCATGAATCCCCAGTTGTCAGACGCTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTTGAGGCATCAAAGTGGAAGGCCAGAGCAGTTGCTAAGGTCAAAGGTCTGGTCTCTAGCTTGGTAATAGGTTTGAATAGAGGATTCAAGCCATTCTCAGAGTGCATATTCTTCAAGAACAATTGTTCGGGTTGGAAGAAGATGACAGAGCAATCTCCTTTGAAAGATGCTCACTCTCCTATTTTTCTTCTCACCAATATTTGCAATCTCATCTCTATTCGTCTTGATTCATCAAATTATGTCCTCTGGAAATTTCAATTTTCTTCTAAGTTGAAGGCTCACAAATTGTTTGGTTTTGTTGGTAGATCTAACAAAGCACCAACCGAATTTCTTCAATCTACGTTTGAATCGGAATCCCTGTCTTCTTCAACTCGTACTCTTAATCCTCTGTATGATGACTGGTGTGCCAAGGATCAAGCGTTGATGACTCTGATAAACACTACTCTCTCTACCAAAGCCCTAACTTATATTGTTAGTTGCAAATCTGCCAATGAGAAAGCGGATGAATCAATTGATGCTTATGTTAGACGAATTAAGAAGATTGAGGATAAACTTGTTAATGTTTCTTCAGTTGTAAACGATGAAGACTTACTGATCTATGCTTTGAATGGTCTTCCTCTTGAGCATAATATCTTTCGAACGTCAATGAGGACTTGCTCACAACCAGTGACATTTGATGAACTCCATGTCTTGATGAAATCTGAAGAGTTTGCTTTAGCCAAGCAATCTAAACGAGAAGATTTGTCGATTCAGCCTACTGCTATGGTTGCGAATCAGTCAACTCATCGGAATCAGTTTAATTTGAATGGTCGTGGACATGGTTTTGTTGGTCAATCCTCTGGTAAGTCTTCTGTTTCAGCTGGTGCTAAAATGAATTGTCAAATTTGCAATCGTCCTGGTCACATGACTCTTGACTGCTACAATAGGATGGATTATCACTTTGAAGGTCGTCATCCTCCTCCACAACTGGCTGCCATGGCCAAACTTTGTTCGAAAGGACCTAGTGTTAATGGTCTTTATCCCATTACACCTTATTCCTCTAGCATTTACTCTTATCTGGGAGGCTCACCCACTGCTCATGTTGGAGTCAAGTCTCCTTCTACTCTTTGGCACAACTGCTTTTTTGTCTCTTGCCATGTTCTGTTTGATGAAACTGTCTTTCATTTCTCTTCTACTTCGTCTACTTCACCTAATTCTTCTTCATATACGTCTACTTCATCTTTACCCTCTTATTCATTGTCTATCCCTTTGCCTTTACTTTTATCTTCTCCATCATCTACTTCTTTACCGTCATCTCCCTCTGTTCCACAACCTTGTACTGATAATTTGGTGTTTGAATTACCTCATGCTAACACTGTTACACCATCTAGTAATGGTGCTAATGTTGAGCCAGCTTCTAATCTTGGTAGTCATGTTGAGCACATTACTAGTAGTGGTGTTTCAACACCTTGTTCTTCAACTCAACCTTCCTCCAATGTCAAAAATACTCATGCTATGAAGACACGTTCAAAGTCTGAAGAAGATATTGATTATGATGAGACGTTTAGTTCTGTTGTTAAGAAACCCACTGTTCGTATTATTCTTTCATCACTTGCTGCACATTTTGGCTGGAAGTTGTGGCAGCTTGATTTTATGCATTCACCTTCGCTTTGTCATTTGTCTGCGGCAAAACGGGTCTTAAGATATCTTCAGGGCACGACATTTAAGGGTCTGTTGTTCAAGAAATCAGCTTCAGGCCTTGTTTTAAATGCTTTTTCGGACTCTGATTGGGTTGGCAGTGTGTTGGATAAAAGGTCTACTACAGCTATTCAATTGGCTCATAACACTGTTTTTCATGGTCGTACAAAGCATGTTGAAGTCGACTATCACTTTGTTCATGAGTGTGTTGTTCATCAGGATGTTCTGTTGAAATATACATCTACTCAGTCTCAATTTGTTGATGTTTTTACAAAACCTTTGACCACAGATCAATGA

Coding sequence (CDS)

ATGCAAGTCAAGGATTATTTAACTTGCAAGAAAGTGCATAAGGCATTGAAGGAGAAACCGAAAGGGATGACAGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAACCATAAGGATGTGTTTTTCAATGGATATGACAAGTCTAGTAGCCCATGAGACAACTGCAGTCAAGTTGATGGAAGCGCTTACAAACAAGTATGAAAAACCCTCTGCAAATGATAAGTTGTTAACATCTTTACCTGATAGTTGGGAAACGATGAAGACAGCAGAGTCTAATTCAACTGGAAATAACACTTTAAAATTTTCAGAAGTTTGTGATATAGCCATAGCTAAGGAAATTCGTAGGCAGGGTAGTAATAAAGAGTCTACAGTAGGGTCAACTTTGGTTATGACTAAAGGGAAAGATAAGGTTGATGAAGAAAATGAATCGAGTAACAGTAGGAAAAAGTGGAAAAGTAGGAATGAGGTAGAATGTTTTTACTGCCATAAGAAAGGTCAATTCAAGAGTCAGTGTAGGAAATTTAAAGAGGATCAGAAAAGAAAACCAAAGGCAAATGTAGTGGTGAAGGTTGTCTTAGTTTGTGTTGAGAGTGACATAAAATATAGTAACCACTCATCAGATTGGATATTAAACAGTGCAGCTTCTGTTCACATAGCTTCAAATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCATGGCCTAGTGAGGATGGGGAATGATAGAACCTCCAAGACTAGAGGGATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGGTATATTGGTACTACGAGATGTCAGGATCGTGCCTAATATCAAGATGAATCTTATTTCTATTGGTAAGTTGGCAGATGATGGTTACATGTGTGAGTTTGGTAGTCGCCAGTGTAAACTCAAGTTCGGATCCCAGGTAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAGATGTCAGTTGAATGTTGCCAAAGGTTCAAAGAGACAGTGGATGCCGGTTAAAGCTACAGATGGTAATTGTAGAGGTACAGCTGAGCCAGCATCAAGGATACCCAATTTCGATCAGTCCGATCAAGATCCTTCAGTTCAGATACAATTGGGAAGTCCAGGAGAGAAAGTTGATGGCTATCATGAATCCCCAGTTGTCAGACGCTCGAATGAATTGAAGAAGTCGCTTAGGCGAGTTGAGGCATCAAAGTGGAAGGCCAGAGCAGTTGCTAAGGTCAAAGGTCTGGTCTCTAGCTTGGTAATAGGTTTGAATAGAGGATTCAAGCCATTCTCAGAGTGCATATTCTTCAAGAACAATTGTTCGGGTTGGAAGAAGATGACAGAGCAATCTCCTTTGAAAGATGCTCACTCTCCTATTTTTCTTCTCACCAATATTTGCAATCTCATCTCTATTCGTCTTGATTCATCAAATTATGTCCTCTGGAAATTTCAATTTTCTTCTAAGTTGAAGGCTCACAAATTGTTTGGTTTTGTTGGTAGATCTAACAAAGCACCAACCGAATTTCTTCAATCTACGTTTGAATCGGAATCCCTGTCTTCTTCAACTCGTACTCTTAATCCTCTGTATGATGACTGGTGTGCCAAGGATCAAGCGTTGATGACTCTGATAAACACTACTCTCTCTACCAAAGCCCTAACTTATATTGTTAGTTGCAAATCTGCCAATGAGAAAGCGGATGAATCAATTGATGCTTATGTTAGACGAATTAAGAAGATTGAGGATAAACTTGTTAATGTTTCTTCAGTTGTAAACGATGAAGACTTACTGATCTATGCTTTGAATGGTCTTCCTCTTGAGCATAATATCTTTCGAACGTCAATGAGGACTTGCTCACAACCAGTGACATTTGATGAACTCCATGTCTTGATGAAATCTGAAGAGTTTGCTTTAGCCAAGCAATCTAAACGAGAAGATTTGTCGATTCAGCCTACTGCTATGGTTGCGAATCAGTCAACTCATCGGAATCAGTTTAATTTGAATGGTCGTGGACATGGTTTTGTTGGTCAATCCTCTGGTAAGTCTTCTGTTTCAGCTGGTGCTAAAATGAATTGTCAAATTTGCAATCGTCCTGGTCACATGACTCTTGACTGCTACAATAGGATGGATTATCACTTTGAAGGTCGTCATCCTCCTCCACAACTGGCTGCCATGGCCAAACTTTGTTCGAAAGGACCTAGTGTTAATGGTCTTTATCCCATTACACCTTATTCCTCTAGCATTTACTCTTATCTGGGAGGCTCACCCACTGCTCATGTTGGAGTCAAGTCTCCTTCTACTCTTTGGCACAACTGCTTTTTTGTCTCTTGCCATGTTCTGTTTGATGAAACTGTCTTTCATTTCTCTTCTACTTCGTCTACTTCACCTAATTCTTCTTCATATACGTCTACTTCATCTTTACCCTCTTATTCATTGTCTATCCCTTTGCCTTTACTTTTATCTTCTCCATCATCTACTTCTTTACCGTCATCTCCCTCTGTTCCACAACCTTGTACTGATAATTTGGTGTTTGAATTACCTCATGCTAACACTGTTACACCATCTAGTAATGGTGCTAATGTTGAGCCAGCTTCTAATCTTGGTAGTCATGTTGAGCACATTACTAGTAGTGGTGTTTCAACACCTTGTTCTTCAACTCAACCTTCCTCCAATGTCAAAAATACTCATGCTATGAAGACACGTTCAAAGTCTGAAGAAGATATTGATTATGATGAGACGTTTAGTTCTGTTGTTAAGAAACCCACTGTTCGTATTATTCTTTCATCACTTGCTGCACATTTTGGCTGGAAGTTGTGGCAGCTTGATTTTATGCATTCACCTTCGCTTTGTCATTTGTCTGCGGCAAAACGGGTCTTAAGATATCTTCAGGGCACGACATTTAAGGGTCTGTTGTTCAAGAAATCAGCTTCAGGCCTTGTTTTAAATGCTTTTTCGGACTCTGATTGGGTTGGCAGTGTGTTGGATAAAAGGTCTACTACAGCTATTCAATTGGCTCATAACACTGTTTTTCATGGTCGTACAAAGCATGTTGAAGTCGACTATCACTTTGTTCATGAGTGTGTTGTTCATCAGGATGTTCTGTTGAAATATACATCTACTCAGTCTCAATTTGTTGATGTTTTTACAAAACCTTTGACCACAGATCAATGA

Protein sequence

MQVKDYLTCKKVHKALKEKPKGMTDEDWEALDEEAVATIRMCFSMDMTSLVAHETTAVKLMEALTNKYEKPSANDKLLTSLPDSWETMKTAESNSTGNNTLKFSEVCDIAIAKEIRRQGSNKESTVGSTLVMTKGKDKVDEENESSNSRKKWKSRNEVECFYCHKKGQFKSQCRKFKEDQKRKPKANVVVKVVLVCVESDIKYSNHSSDWILNSAASVHIASNRSLFTSFTGGHHGLVRMGNDRTSKTRGIGDVSLKTECGGILVLRDVRIVPNIKMNLISIGKLADDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCQLNVAKGSKRQWMPVKATDGNCRGTAEPASRIPNFDQSDQDPSVQIQLGSPGEKVDGYHESPVVRRSNELKKSLRRVEASKWKARAVAKVKGLVSSLVIGLNRGFKPFSECIFFKNNCSGWKKMTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAPTEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANEKADESIDAYVRRIKKIEDKLVNVSSVVNDEDLLIYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVANQSTHRNQFNLNGRGHGFVGQSSGKSSVSAGAKMNCQICNRPGHMTLDCYNRMDYHFEGRHPPPQLAAMAKLCSKGPSVNGLYPITPYSSSIYSYLGGSPTAHVGVKSPSTLWHNCFFVSCHVLFDETVFHFSSTSSTSPNSSSYTSTSSLPSYSLSIPLPLLLSSPSSTSLPSSPSVPQPCTDNLVFELPHANTVTPSSNGANVEPASNLGSHVEHITSSGVSTPCSSTQPSSNVKNTHAMKTRSKSEEDIDYDETFSSVVKKPTVRIILSSLAAHFGWKLWQLDFMHSPSLCHLSAAKRVLRYLQGTTFKGLLFKKSASGLVLNAFSDSDWVGSVLDKRSTTAIQLAHNTVFHGRTKHVEVDYHFVHECVVHQDVLLKYTSTQSQFVDVFTKPLTTDQ

Homology

[Close]

BLAST of Lag0039599 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])

HSP 1 Score: 292.4 bits (747), Expect = 1.6e-74
Identity = 168/329 (51.06%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 451 KDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAPTEFLQST 510
           KD HSPIFLL+NICNL+SIRLDS++++LWKFQ ++ LKAHKLFGF+  S  AP++FL S+
Sbjct: 31  KDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPSQFLASS 90

Query: 511 FESESLSSSTRTL---NPLYDDWCAKDQALMTLINTTLSTKALTYIV------------- 570
            E+ES  ++T +L   NP ++DW AKDQALMTLIN TLS +AL Y+V             
Sbjct: 91  SETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGTSKQVWEVLE 150

Query: 571 ----------------SCKSANEKADESIDAYVRRIKKIEDKLVNVSSVVNDEDLLIYAL 630
                             +S  +K +ESIDAYV+RIK+I+DK  NVS  +NDE LLIYAL
Sbjct: 151 KHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITINDEYLLIYAL 210

Query: 631 NGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVA----- 690
           NGL  E+N   TSMRT +Q V+F+ELHV MKSEE A+ KQ KREDL  QP A+ A     
Sbjct: 211 NGLSTEYNTLSTSMRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQS 270

Query: 691 ---------NQSTHRNQFNLNGRGHG-----FVGQSSGKS------SVSAGAKMNCQICN 723
                    NQS  R +   NGRG       F  Q  G+S      S  A  +  CQIC 
Sbjct: 271 QNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNRSPCQICG 330

[Close]

BLAST of Lag0039599 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 4.4e-72
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 444 MTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAP 503
           +   S  KD+ SPIFLL+NICNLIS+RLDS+N+VLWKFQ ++ LKAHKL+GF+  +N  P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 504 TEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANE-- 563
                 T  S S S+     NP Y+DW AKDQALMT+IN TLS +AL Y+V   S+ +  
Sbjct: 67  PR----TNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 564 ---------------------------KADESIDAYVRRIKKIEDKLVNVSSVVNDEDLL 623
                                      K DESIDAY++RIK+I+DKL NVS+ +N+EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 624 IYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVAN 683
           IYALNGLP E+N FRTSMRT SQPVTF+ELHVL+++EE ALAKQSK +D   QPT ++++
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 684 QS-------THRNQFNLNGRGHG---------FVGQSSGKSSVSAGAKMN-----CQICN 723
                    T  N F + G GHG         F  Q+ G  S      ++     CQIC+
Sbjct: 247 SQSLLSCAPTFDNNF-VRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICS 306

[Close]

BLAST of Lag0039599 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 4.4e-72
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 444 MTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAP 503
           +   S  KD+ SPIFLL+NICNLIS+RLDS+N+VLWKFQ ++ LKAHKL+GF+  +N  P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 504 TEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANE-- 563
                 T  S S S+     NP Y+DW AKDQALMT+IN TLS +AL Y+V   S+ +  
Sbjct: 67  PR----TNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 564 ---------------------------KADESIDAYVRRIKKIEDKLVNVSSVVNDEDLL 623
                                      K DESIDAY++RIK+I+DKL NVS+ +N+EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 624 IYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVAN 683
           IYALNGLP E+N FRTSMRT SQPVTF+ELHVL+++EE ALAKQSK +D   QPT ++++
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 684 QS-------THRNQFNLNGRGHG---------FVGQSSGKSSVSAGAKMN-----CQICN 723
                    T  N F + G GHG         F  Q+ G  S      ++     CQIC+
Sbjct: 247 SQSLLSCAPTFDNNF-VRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICS 306

[Close]

BLAST of Lag0039599 vs. NCBI nr
Match: KAA0049700.1 (T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 4.4e-72
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 444 MTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAP 503
           +   S  KD+ SPIFLL+NICNLIS+RLDS+N+VLWKFQ ++ LKAHKL+GF+  +N  P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 504 TEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANE-- 563
                 T  S S S+     NP Y+DW AKDQALMT+IN TLS +AL Y+V   S+ +  
Sbjct: 67  PR----TNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 564 ---------------------------KADESIDAYVRRIKKIEDKLVNVSSVVNDEDLL 623
                                      K DESIDAY++RIK+I+DKL NVS+ +N+EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 624 IYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVAN 683
           IYALNGLP E+N FRTSMRT SQPVTF+ELHVL+++EE ALAKQSK +D   QPT ++++
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 684 QS-------THRNQFNLNGRGHG---------FVGQSSGKSSVSAGAKMN-----CQICN 723
                    T  N F + G GHG         F  Q+ G  S      ++     CQIC+
Sbjct: 247 SQSLLSCAPTFDNNF-VRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICS 306

[Close]

BLAST of Lag0039599 vs. NCBI nr
Match: XP_016900446.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 4.4e-72
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 444 MTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAP 503
           +   S  KD+ SPIFLL+NICNLIS+RLDS+N+VLWKFQ ++ LKAHKL+GF+  +N  P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 504 TEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANE-- 563
                 T  S S S+     NP Y+DW AKDQALMT+IN TLS +AL Y+V   S+ +  
Sbjct: 67  PR----TNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 564 ---------------------------KADESIDAYVRRIKKIEDKLVNVSSVVNDEDLL 623
                                      K DESIDAY++RIK+I+DKL NVS+ +N+EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 624 IYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVAN 683
           IYALNGLP E+N FRTSMRT SQPVTF+ELHVL+++EE ALAKQSK +D   QPT ++++
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 684 QS-------THRNQFNLNGRGHG---------FVGQSSGKSSVSAGAKMN-----CQICN 723
                    T  N F + G GHG         F  Q+ G  S      ++     CQIC+
Sbjct: 247 SQSLLSCAPTFDNNF-VRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICS 306

[Close]

BLAST of Lag0039599 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-28
Identity = 120/394 (30.46%), Postives = 178/394 (45.18%), Query Frame = 0


Query: 2   QVKDYLTCKKVHKAL---KEKPKGMTDEDWEALDEEAVATIRMCFSMDMTSLVAHETTA- 61
           +++D L  + +HK L    +KP  M  EDW  LDE A + IR+  S D+ + +  E TA 
Sbjct: 23  RMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTAR 82

Query: 62  --------VKLMEALTNKY-----------------------------------EKPSAN 121
                   + + + LTNK                                     K    
Sbjct: 83  GIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEE 142

Query: 122 DK---LLTSLPDSWETMKTAESNSTGNNTLKFSEVCDIAIAKEIRRQGSNKESTVGSTLV 181
           DK   LL SLP S++ + T   +  G  T++  +V    +  E  R+   K    G  L+
Sbjct: 143 DKAILLLNSLPSSYDNLATTILH--GKTTIELKDVTSALLLNEKMRK---KPENQGQALI 202

Query: 182 MT-KGKDKVDEENESSNSRKKWKSRNEVE-----CFYCHKKGQFKSQC---RKFKED--- 241
              +G+      N    S  + KS+N  +     C+ C++ G FK  C   RK K +   
Sbjct: 203 TEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSG 262

Query: 242 QKRKPKANVVVK----VVLVCVESD--IKYSNHSSDWILNSAASVHIASNRSLFTSFTGG 301
           QK       +V+    VVL   E +  +  S   S+W++++AAS H    R LF  +  G
Sbjct: 263 QKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAG 322

Query: 302 HHGLVRMGNDRTSKTRGIGDVSLKTECGGILVLRDVRIVPNIKMNLISIGKLADDGYMCE 328
             G V+MGN   SK  GIGD+ +KT  G  LVL+DVR VP+++MNLIS   L  DGY   
Sbjct: 323 DFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESY 382

HSP 2 Score: 43.9 bits (102), Expect = 1.3e-02
Identity = 20/53 (37.74%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 995  STTAIQLAHNTVFHGRTKHVEVDYHFVHECVVHQDVLLKYTSTQSQFVDVFTK 1048
            S +AI L+ N+++H RTKH++V YH++ E V  + + +   ST     D+ TK
Sbjct: 1257 SQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTK 1309

[Close]

BLAST of Lag0039599 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-09
Identity = 51/177 (28.81%), Postives = 65/177 (36.72%), Query Frame = 0


Query: 940  FMHSPSLCHLSAAKRVLRYLQGTTFKGLLFKKSASGLVLNAFSDSDWVGSVLDKRSTT-- 999
            FMH P+  HL A KR+LRYL GT   G+  KK  + L L+A+SD+DW G   D  ST   
Sbjct: 1272 FMHMPTEEHLQALKRILRYLAGTPNHGIFLKK-GNTLSLHAYSDADWAGDKDDYVSTNGY 1331

Query: 1000 ------------------------------------------------------------ 1051
                                                                        
Sbjct: 1332 IVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYC 1391

[Close]

BLAST of Lag0039599 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-09
Identity = 52/177 (29.38%), Postives = 68/177 (38.42%), Query Frame = 0


Query: 940  FMHSPSLCHLSAAKRVLRYLQGTTFKGLLFKKSASGLVLNAFSDSDWVGSVLDKRSTT-- 999
            +MH P+  H +A KRVLRYL GT   G+  KK  + L L+A+SD+DW G   D  ST   
Sbjct: 1255 YMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK-GNTLSLHAYSDADWAGDTDDYVSTNGY 1314

Query: 1000 ------------------------------------------------AIQLAH------ 1051
                                                             IQL+H      
Sbjct: 1315 IVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYC 1374

[Close]

BLAST of Lag0039599 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-06
Identity = 29/57 (50.88%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 941 MHSPSLCHLSAAKRVLRYLQGTTFKGLLFKKSASGLVLNAFSDSDWVGSVLDKRSTT 998
           MH P+L      KRVLRY++GT F GL   K+ S L + AF DSDW G    +RSTT
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKN-SKLNVQAFCDSDWAGCTSTRRSTT 183

[Close]

BLAST of Lag0039599 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 7.8e-75
Identity = 168/329 (51.06%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 451 KDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAPTEFLQST 510
           KD HSPIFLL+NICNL+SIRLDS++++LWKFQ ++ LKAHKLFGF+  S  AP++FL S+
Sbjct: 31  KDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPSQFLASS 90

Query: 511 FESESLSSSTRTL---NPLYDDWCAKDQALMTLINTTLSTKALTYIV------------- 570
            E+ES  ++T +L   NP ++DW AKDQALMTLIN TLS +AL Y+V             
Sbjct: 91  SETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGTSKQVWEVLE 150

Query: 571 ----------------SCKSANEKADESIDAYVRRIKKIEDKLVNVSSVVNDEDLLIYAL 630
                             +S  +K +ESIDAYV+RIK+I+DK  NVS  +NDE LLIYAL
Sbjct: 151 KHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITINDEYLLIYAL 210

Query: 631 NGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVA----- 690
           NGL  E+N   TSMRT +Q V+F+ELHV MKSEE A+ KQ KREDL  QP A+ A     
Sbjct: 211 NGLSTEYNTLSTSMRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQS 270

Query: 691 ---------NQSTHRNQFNLNGRGHG-----FVGQSSGKS------SVSAGAKMNCQICN 723
                    NQS  R +   NGRG       F  Q  G+S      S  A  +  CQIC 
Sbjct: 271 QNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGNFFTSFQADNRSPCQICG 330

[Close]

BLAST of Lag0039599 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-72
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 444 MTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAP 503
           +   S  KD+ SPIFLL+NICNLIS+RLDS+N+VLWKFQ ++ LKAHKL+GF+  +N  P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 504 TEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANE-- 563
                 T  S S S+     NP Y+DW AKDQALMT+IN TLS +AL Y+V   S+ +  
Sbjct: 67  PR----TNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 564 ---------------------------KADESIDAYVRRIKKIEDKLVNVSSVVNDEDLL 623
                                      K DESIDAY++RIK+I+DKL NVS+ +N+EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 624 IYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVAN 683
           IYALNGLP E+N FRTSMRT SQPVTF+ELHVL+++EE ALAKQSK +D   QPT ++++
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 684 QS-------THRNQFNLNGRGHG---------FVGQSSGKSSVSAGAKMN-----CQICN 723
                    T  N F + G GHG         F  Q+ G  S      ++     CQIC+
Sbjct: 247 SQSLLSCAPTFDNNF-VRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICS 306

[Close]

BLAST of Lag0039599 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-72
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 444 MTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAP 503
           +   S  KD+ SPIFLL+NICNLIS+RLDS+N+VLWKFQ ++ LKAHKL+GF+  +N  P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 504 TEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANE-- 563
                 T  S S S+     NP Y+DW AKDQALMT+IN TLS +AL Y+V   S+ +  
Sbjct: 67  PR----TNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 564 ---------------------------KADESIDAYVRRIKKIEDKLVNVSSVVNDEDLL 623
                                      K DESIDAY++RIK+I+DKL NVS+ +N+EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 624 IYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVAN 683
           IYALNGLP E+N FRTSMRT SQPVTF+ELHVL+++EE ALAKQSK +D   QPT ++++
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 684 QS-------THRNQFNLNGRGHG---------FVGQSSGKSSVSAGAKMN-----CQICN 723
                    T  N F + G GHG         F  Q+ G  S      ++     CQIC+
Sbjct: 247 SQSLLSCAPTFDNNF-VRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICS 306

[Close]

BLAST of Lag0039599 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-72
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 444 MTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAP 503
           +   S  KD+ SPIFLL+NICNLIS+RLDS+N+VLWKFQ ++ LKAHKL+GF+  +N  P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 504 TEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANE-- 563
                 T  S S S+     NP Y+DW AKDQALMT+IN TLS +AL Y+V   S+ +  
Sbjct: 67  PR----TNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 564 ---------------------------KADESIDAYVRRIKKIEDKLVNVSSVVNDEDLL 623
                                      K DESIDAY++RIK+I+DKL NVS+ +N+EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 624 IYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVAN 683
           IYALNGLP E+N FRTSMRT SQPVTF+ELHVL+++EE ALAKQSK +D   QPT ++++
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 684 QS-------THRNQFNLNGRGHG---------FVGQSSGKSSVSAGAKMN-----CQICN 723
                    T  N F + G GHG         F  Q+ G  S      ++     CQIC+
Sbjct: 247 SQSLLSCAPTFDNNF-VRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICS 306

[Close]

BLAST of Lag0039599 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-72
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 444 MTEQSPLKDAHSPIFLLTNICNLISIRLDSSNYVLWKFQFSSKLKAHKLFGFVGRSNKAP 503
           +   S  KD+ SPIFLL+NICNLIS+RLDS+N+VLWKFQ ++ LKAHKL+GF+  +N  P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 504 TEFLQSTFESESLSSSTRTLNPLYDDWCAKDQALMTLINTTLSTKALTYIVSCKSANE-- 563
                 T  S S S+     NP Y+DW AKDQALMT+IN TLS +AL Y+V   S+ +  
Sbjct: 67  PR----TNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 564 ---------------------------KADESIDAYVRRIKKIEDKLVNVSSVVNDEDLL 623
                                      K DESIDAY++RIK+I+DKL NVS+ +N+EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 624 IYALNGLPLEHNIFRTSMRTCSQPVTFDELHVLMKSEEFALAKQSKREDLSIQPTAMVAN 683
           IYALNGLP E+N FRTSMRT SQPVTF+ELHVL+++EE ALAKQSK +D   QPT ++++
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 684 QS-------THRNQFNLNGRGHG---------FVGQSSGKSSVSAGAKMN-----CQICN 723
                    T  N F + G GHG         F  Q+ G  S      ++     CQIC+
Sbjct: 247 SQSLLSCAPTFDNNF-VRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICS 306

[Close]

BLAST of Lag0039599 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-07
Identity = 29/57 (50.88%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 941 MHSPSLCHLSAAKRVLRYLQGTTFKGLLFKKSASGLVLNAFSDSDWVGSVLDKRSTT 998
           MH P+L      KRVLRY++GT F GL   K+ S L + AF DSDW G    +RSTT
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKN-SKLNVQAFCDSDWAGCTSTRRSTT 183

[Close]

BLAST of Lag0039599 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06
Identity = 27/79 (34.18%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 1  MQVKDYLTCKKVHKALKEKPKGMTDEDWEALDEEAVATIRMCFSMDMTSLVAHETTAVKL 60
          M+++DYL  KK+H+ L +K + M+ +DW  L  + +  IR+  S ++   VA E +   L
Sbjct: 19 MKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDGL 78

Query: 61 MEALTNKYEKPSANDKLLT 80
          M+ L++ Y+KPS N+ +++
Sbjct: 79 MKVLSDIYKKPSTNNTVIS 97

[Close]

BLAST of Lag0039599 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 44.3 bits (103), Expect = 7.1e-04
Identity = 33/143 (23.08%), Postives = 59/143 (41.26%), Query Frame = 0


Query: 153 KSRNEVECFYCHKKGQFKSQCRKFKEDQKRKPKANVVVKVVLVCVESDIKYSNHSSDWIL 212
           KS++E  C  C+K    +  C+      K + +  +VV   L  V +    +     WI+
Sbjct: 223 KSKSEKWCGLCYKNNHNQEDCKFRIHTDKEEKEDEIVVDYRLETVPNLGAKTYDDDIWII 282

Query: 213 NSAASVHIASNRSLFTSFTGGHHGLVRMGNDRTSKTRGIGDVSLKTECGGILVLRDVRIV 272
           +  A +++      FT+        V   +       G GDV ++ + G    +R+V  V
Sbjct: 283 HKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIFV 342

Query: 273 PNIKMNLISIGKLADDGYMCEFG 296
           P +  N++S GK+    Y    G
Sbjct: 343 PGLNRNVLSFGKMVSKRYSISTG 365

The following BLAST results are available for this feature:

BLAST of Lag0039599 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150845.1	1.6e-74	51.06	uncharacterized protein LOC111018892 [Momordica charantia]	[more]
XP_008448007.1	4.4e-72	49.85	PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]	[more]
XP_008448008.1	4.4e-72	49.85	PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]	[more]
KAA0049700.1	4.4e-72	49.85	T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa]	[more]
XP_016900446.1	4.4e-72	49.85	PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]	[more]

BLAST of Lag0039599 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.4e-28	30.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	1.1e-09	28.81	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.1e-09	29.38	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	2.0e-06	50.88	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lag0039599 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9L6	7.8e-75	51.06	uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5D3CLI6	2.1e-72	49.85	T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=...	[more]
A0A1S3BI58	2.1e-72	49.85	uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DWT9	2.1e-72	49.85	uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BIR3	2.1e-72	49.85	uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lag0039599 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	1.4e-07	50.88	DNA/RNA polymerases superfamily protein	[more]
AT3G29785.1	1.2e-06	34.18	unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact...	[more]
AT3G21000.1	7.1e-04	23.08	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 560..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 875..894
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 875..901
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..150
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 77..280 coord: 454..724
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 995..1052 e-value: 2.92694E-19 score: 83.2865
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 688..704 e-value: 0.26 score: 14.8 coord: 159..175 e-value: 1.6 score: 9.9
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 465..497 e-value: 3.9E-6 score: 26.5
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 143..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039599.1	Lag0039599.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding