Lag0039584 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGGAAACAGAGGCAGAGCCTCATCCTCAAGGGGCAGTCGCCCATCTTCTTCTTCTCCAACACCTCCTCCTATGAGTGCTGATCAATACGCCATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGGTCAAGGCAAGGTGGTATTCGCCCGATGCCTCCAATGGAGTCTTCTACTCCACCTCCACTGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAGTTGTTCAATTGAGACCTCTTGTCTCTCCTTCCTTCCTCAATAACAGGATCATCGATCCCATCGTCATCAACTTATTCTCAGGCAGTTGTTCCTGA ATGAGCGGAAACAGAGGCAGAGCCTCATCCTCAAGGGGCAGTCGCCCATCTTCTTCTTCTCCAACACCTCCTCCTATGAGTGCTGATCAATACGCCATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGGTCAAGGCAAGGTGGTATTCGCCCGATGCCTCCAATGGAGTCTTCTACTCCACCTCCACTGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAGTTGTTCAATTGAGACCTCTTGTCTCTCCTTCCTTCCTCAATAACAGGATCATCGATCCCATCGTCATCAACTTATTCTCAGGCAGTTGTTCCTGA ATGAGCGGAAACAGAGGCAGAGCCTCATCCTCAAGGGGCAGTCGCCCATCTTCTTCTTCTCCAACACCTCCTCCTATGAGTGCTGATCAATACGCCATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGGTCAAGGCAAGGTGGTATTCGCCCGATGCCTCCAATGGAGTCTTCTACTCCACCTCCACTGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAGTTGTTCAATTGAGACCTCTTGTCTCTCCTTCCTTCCTCAATAACAGGATCATCGATCCCATCGTCATCAACTTATTCTCAGGCAGTTGTTCCTGA MSGNRGRASSSRGSRPSSSSPTPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPLPSANLVRPSGGVVQLRPLVSPSFLNNRIIDPIVINLFSGSCS Homology
BLAST of Lag0039584 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 7.7e-17 Identity = 59/83 (71.08%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of Lag0039584 vs. NCBI nr
Match: TYK14869.1 (hypothetical protein E5676_scaffold1432G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 95.5 bits (236), Expect = 2.9e-16 Identity = 58/83 (69.88%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of Lag0039584 vs. NCBI nr
Match: KAA0056259.1 (hypothetical protein E6C27_scaffold226G00270 [Cucumis melo var. makuwa] >TYK05242.1 hypothetical protein E5676_scaffold108G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 90.9 bits (224), Expect = 7.2e-15 Identity = 56/83 (67.47%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of Lag0039584 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]) HSP 1 Score: 90.5 bits (223), Expect = 9.4e-15 Identity = 55/83 (66.27%), Postives = 61/83 (73.49%), Query Frame = 0
BLAST of Lag0039584 vs. NCBI nr
Match: KAE8646253.1 (hypothetical protein Csa_023844, partial [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 1.2e-14 Identity = 57/88 (64.77%), Postives = 66/88 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|