Lag0039537 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039537
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr2: 45873524 .. 45874503 (+)
RNA-Seq ExpressionLag0039537
SyntenyLag0039537
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAACTGATTAAGCGATGGAAATCTATGGCATTGACGGGGGAGGAGGCTGATGTTATTAGGCCAAAGGAGATGGCGGCGCCGTTGTCTGGGGCGTCGTTAGAATTATGCCTAGTGGGCAAGGTGATATCGTCTAAAAGGGTGAACGTGGAGGCCTTCAGAACAGTCATGAAAGGTGCCTGGAGGGTTCACGATGTGACCCGAATTGAGGCTGCGGGTGAGAATACGTTTGGGATACAGTTTCGGTCGCAAGGGGAAAGAAGCAGGTGCTATCATCTGGGTCGTGGTCGTTTGATAGGGCTCTATTGATACTGAAGGAGCCAAAGGCAACAGTGGGGTTGGTAGGTGTTGATTTCAGTGATTGTCCGTTTTGGGTTCAGATATGCAACGTGCCGACGCAGTGGCAGACTGTGCAGATGGCGAGATCGCTGGGAGGGAAGATGGGCACCGTGGAGGAGGTTGAGGGACATGGGGAAAAGGATTTGGCGGGTCCAGTGCTCTGAGTAAGAATTCGCTTGAAGGTTGGAAAGCCTTTGCGTCGGGGTTTCCAACTCCAGGACGAGGATGAGCAGGAAGTATGGTGTCCGGTTCTCTATGAGCGCTTGCCTGACTTCTGCTATGTGTGTGGATGCCTGGGGCATGTCAAGAGGGAATGCACAAGTGAGGCAGTTGTGAACGCGGCGAGTGTGGGAGACCAGTATGGGGAGTGGATGCGAGCTGGGATGATGGGTGGAGAAGGGGCTCGGAGAAGGTATGAAGGCAAGGGGGATGAGGTTAAGATTAGTGGGGATGAAGGAAGGGTACAGGTAGAGCAAGAAGGGGTAACCGATGTACTTCGGGTTGAACAGGATAGCCCACTTAGTGGTGGCCCAACGGTAGGAGAGGTGGTTCATGTAGGTCTTGACGTGGAGCAGGAGCAGGATGTTCATGGCCCAAATAAGGATCCGAAAGGTAAACAAAAGGAGGATGCCGGCTGA

mRNA sequence

ATGGAGGAACTGATTAAGCGATGGAAATCTATGGCATTGACGGGGGAGGAGGCTGATGTTATTAGGCCAAAGGAGATGGCGGCGCCGTTGTCTGGGGCGTCGTTAGAATTATGCCTAGTGGGCAAGGTGATATCGTCTAAAAGGGTGAACGTGGAGGCCTTCAGAACAGTCATGAAAGTTTCGGTCGCAAGGGGAAAGAAGCAGGTGCTATCATCTGGGTCGTGGTCGTTTGATAGGGCTCTATTGATACTGAAGGAGCCAAAGGCAACAGTGGGGTTGGTAGGTGTTGATTTCAGTGATTGTCCGTTTTGGGTTCAGATATGCAACGTGCCGACGCAGTGGCAGACTGTGCAGATGGCGAGATCGCTGGGAGGGAAGATGGGCACCGTGGAGGAGGACGAGGATGAGCAGGAAGTATGGTGTCCGGTTCTCTATGAGCGCTTGCCTGACTTCTGCTATGTGTGTGGATGCCTGGGGCATGTCAAGAGGGAATGCACAAGTGAGGCAGTTGTGAACGCGGCGAGTGTGGGAGACCAGTATGGGGAGTGGATGCGAGCTGGGATGATGGGTGGAGAAGGGGCTCGGAGAAGGTATGAAGGCAAGGGGGATGAGGTTAAGATTAGTGGGGATGAAGGAAGGGTACAGGTAGAGCAAGAAGGGGTAACCGATGTACTTCGGGTTGAACAGGATAGCCCACTTAGTGGTGGCCCAACGGTAGGAGAGGTGGTTCATGTAGGTCTTGACGTGGAGCAGGAGCAGGATGTTCATGGCCCAAATAAGGATCCGAAAGGTAAACAAAAGGAGGATGCCGGCTGA

Coding sequence (CDS)

ATGGAGGAACTGATTAAGCGATGGAAATCTATGGCATTGACGGGGGAGGAGGCTGATGTTATTAGGCCAAAGGAGATGGCGGCGCCGTTGTCTGGGGCGTCGTTAGAATTATGCCTAGTGGGCAAGGTGATATCGTCTAAAAGGGTGAACGTGGAGGCCTTCAGAACAGTCATGAAAGTTTCGGTCGCAAGGGGAAAGAAGCAGGTGCTATCATCTGGGTCGTGGTCGTTTGATAGGGCTCTATTGATACTGAAGGAGCCAAAGGCAACAGTGGGGTTGGTAGGTGTTGATTTCAGTGATTGTCCGTTTTGGGTTCAGATATGCAACGTGCCGACGCAGTGGCAGACTGTGCAGATGGCGAGATCGCTGGGAGGGAAGATGGGCACCGTGGAGGAGGACGAGGATGAGCAGGAAGTATGGTGTCCGGTTCTCTATGAGCGCTTGCCTGACTTCTGCTATGTGTGTGGATGCCTGGGGCATGTCAAGAGGGAATGCACAAGTGAGGCAGTTGTGAACGCGGCGAGTGTGGGAGACCAGTATGGGGAGTGGATGCGAGCTGGGATGATGGGTGGAGAAGGGGCTCGGAGAAGGTATGAAGGCAAGGGGGATGAGGTTAAGATTAGTGGGGATGAAGGAAGGGTACAGGTAGAGCAAGAAGGGGTAACCGATGTACTTCGGGTTGAACAGGATAGCCCACTTAGTGGTGGCCCAACGGTAGGAGAGGTGGTTCATGTAGGTCTTGACGTGGAGCAGGAGCAGGATGTTCATGGCCCAAATAAGGATCCGAAAGGTAAACAAAAGGAGGATGCCGGCTGA

Protein sequence

MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRAGMMGGEGARRRYEGKGDEVKISGDEGRVQVEQEGVTDVLRVEQDSPLSGGPTVGEVVHVGLDVEQEQDVHGPNKDPKGKQKEDAG
Homology
BLAST of Lag0039537 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-30
Identity = 80/245 (32.65%), Postives = 125/245 (51.02%), Query Frame = 0

Query: 1   MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKV 60
           M+E+   W+    T +E + +        L+  +++LC+V K+ +SKR++ EA R+VMK 
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMK- 60

Query: 61  SVAR-----------------------GKKQVLSSGSWSFDRALLILKEPKATVGLVGVD 120
           SV R                        K +VLSSG W+F+++LL+L  P AT   + ++
Sbjct: 61  SVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMN 120

Query: 121 FSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDE----------------------- 180
           F+ C FW+QI N+P +  + +MA  LG K+G VEE E                       
Sbjct: 121 FNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKP 180

Query: 181 ----------DEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWM 190
                     D +++WCP+ YE+LPDFCY CG +GH  REC   + V   +  +QYG+W+
Sbjct: 181 LRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWL 240

BLAST of Lag0039537 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 73/219 (33.33%), Postives = 101/219 (46.12%), Query Frame = 0

Query: 1   MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK- 60
           M+++ K W++  L  EE D I        L+  +++LC VGK+  SKR+ VEAF +VMK 
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 61  ---------------------VSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDF 120
                                      K +V S G W+FD++LLIL    A    + +D 
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 121 SDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE-------------------------- 165
           S C FWVQI  +  +  T  MA+ LG ++G VEE                          
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

BLAST of Lag0039537 vs. NCBI nr
Match: XP_024033132.1 (uncharacterized protein LOC112095437 [Citrus clementina])

HSP 1 Score: 119.4 bits (298), Expect = 4.8e-23
Identity = 72/240 (30.00%), Postives = 108/240 (45.00%), Query Frame = 0

Query: 2   EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRT----- 61
           EELI++ +++ L GEEAD              ++  CLVGK++ ++ VN E  +T     
Sbjct: 4   EELIRKCQAITLEGEEADKFIFAGQMKEKGSKAVAGCLVGKILLARGVNREGLKTALDQA 63

Query: 62  -----------------VMKVSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFS 121
                            V K      KK+V + G W FDRAL++L+EPK    +    FS
Sbjct: 64  WRTVHDFKVESLGSNIFVFKFLSEADKKRVFNGGPWHFDRALMVLQEPKGIGSIKKQSFS 123

Query: 122 DCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE--------------------------- 181
              FW++I NVP       + R LG ++G VE+                           
Sbjct: 124 HVSFWIRIHNVPLMCMDTSIIRELGSRVGKVEDIGMDAQGECFGEFVRIQVSVNITKPLK 183

Query: 182 ------DEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRA 187
                  ED++++  PV+YERLPDFC+ CGC+GH  REC         ++   +G W++A
Sbjct: 184 KLIVLKQEDDEDIPLPVVYERLPDFCFCCGCIGHQFRECMEYKGQQKENL--PFGPWLKA 241

BLAST of Lag0039537 vs. NCBI nr
Match: XP_015380691.1 (uncharacterized protein LOC107174364 [Citrus sinensis])

HSP 1 Score: 118.6 bits (296), Expect = 8.2e-23
Identity = 75/221 (33.94%), Postives = 99/221 (44.80%), Query Frame = 0

Query: 32  GASLELCLVGKVISSKRVNVEAF--------RTVMKVSV--------------ARGKKQV 91
           G  L  CLVGKV+ ++ VN E F        RTV +V +                 KK+V
Sbjct: 12  GKMLARCLVGKVLLTRAVNKEGFKSALQQVWRTVKEVKIESLGNNCFMFKFTEEADKKRV 71

Query: 92  LSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGT 151
           L+ G W FDRALL+L EPK    L    F+   FW+QI NVP      ++ + LGG +G 
Sbjct: 72  LTGGPWHFDRALLVLTEPKGIGELTKQSFTHTAFWIQIRNVPIACMEKELIQELGGMIGA 131

Query: 152 VEE---------------------------------DEDEQEVWCPVLYERLPDFCYVCG 198
           VEE                                  E E ++  PV+YERLPDFCY CG
Sbjct: 132 VEEIETDENGECLGEFARIRVLINITLPLKKILFLKQEGESDIQMPVVYERLPDFCYCCG 191

BLAST of Lag0039537 vs. NCBI nr
Match: XP_024038344.1 (uncharacterized protein LOC112097374 [Citrus clementina])

HSP 1 Score: 115.5 bits (288), Expect = 6.9e-22
Identity = 77/260 (29.62%), Postives = 116/260 (44.62%), Query Frame = 0

Query: 2   EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVM--- 61
           EELI++ K++ +  E+   +          G  L  CL+GK++ S+ VN E  +  +   
Sbjct: 4   EELIQKCKAITIREEDKGKLSLAVNMKEHRGQVLAGCLMGKILLSRGVNREGLKIALQQV 63

Query: 62  -------------------KVSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFS 121
                              K +    K++VLS G+W FDRAL++L EPK    +   DFS
Sbjct: 64  WQTFKEVKIESLGNNIFMFKFAEEADKRRVLSGGAWHFDRALIVLTEPKRIGEVSKQDFS 123

Query: 122 DCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE--------------------------- 181
              FWVQICN+P      +  + LGG +G VEE                           
Sbjct: 124 HVHFWVQICNIPIACMEREFLQELGGMIGKVEEVETDENGDCFGEYARLRISINITQPLK 183

Query: 182 ------DEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRA 203
                  E E ++  PV+YERLPDFC+ CG +G+  +ECT             +G WM+A
Sbjct: 184 KILFLKQEGESDIPMPVVYERLPDFCFSCGIIGYQFKECTQ--YQGQPKEEFSFGVWMKA 243

BLAST of Lag0039537 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-30
Identity = 80/245 (32.65%), Postives = 125/245 (51.02%), Query Frame = 0

Query: 1   MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKV 60
           M+E+   W+    T +E + +        L+  +++LC+V K+ +SKR++ EA R+VMK 
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMK- 60

Query: 61  SVAR-----------------------GKKQVLSSGSWSFDRALLILKEPKATVGLVGVD 120
           SV R                        K +VLSSG W+F+++LL+L  P AT   + ++
Sbjct: 61  SVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMN 120

Query: 121 FSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDE----------------------- 180
           F+ C FW+QI N+P +  + +MA  LG K+G VEE E                       
Sbjct: 121 FNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKP 180

Query: 181 ----------DEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWM 190
                     D +++WCP+ YE+LPDFCY CG +GH  REC   + V   +  +QYG+W+
Sbjct: 181 LRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWL 240

BLAST of Lag0039537 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 73/219 (33.33%), Postives = 101/219 (46.12%), Query Frame = 0

Query: 1   MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK- 60
           M+++ K W++  L  EE D I        L+  +++LC VGK+  SKR+ VEAF +VMK 
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 61  ---------------------VSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDF 120
                                      K +V S G W+FD++LLIL    A    + +D 
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 121 SDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE-------------------------- 165
           S C FWVQI  +  +  T  MA+ LG ++G VEE                          
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

BLAST of Lag0039537 vs. ExPASy TrEMBL
Match: A0A803M810 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20
Identity = 77/285 (27.02%), Postives = 136/285 (47.72%), Query Frame = 0

Query: 2   EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVS 61
           EEL KRW+ + +T +E DV   ++  + ++  +++L LVGKV+S +  N EA +  +K  
Sbjct: 154 EELSKRWEKLRITNDEEDVAVLEKTDSDVTENNIDLTLVGKVLSMRPYNFEAMQNTLK-- 213

Query: 62  VARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMAR 121
             R ++++L    W FD  L++LKE   +     ++   CPFW+++ N+P   ++ +  +
Sbjct: 214 -KRDREKILKGAPWIFDNNLVLLKEINGSEQPESIELKLCPFWIRLYNLPLDCRSNRDVK 273

Query: 122 SLGGKMGTVEEDEDE-------------------------------QEVWCPVLYERLPD 181
           ++  K+G V E ED+                               Q+ +    YERLP+
Sbjct: 274 TIAEKVGYVMEIEDDWLGWDRSRRARVLVDTTKPIRRVQKIRDKEGQDTFVQFKYERLPN 333

Query: 182 FCYVCGCLGHVKRECTSEAVVNAASVGD--QYGEWMRAGMMGG-----------EGARR- 231
            C+ CG LGH +++C +E   +    G+  Q+G W++A    G           +G R+ 
Sbjct: 334 LCFTCGILGHTEKDCPNE---DEGEEGEEKQWGMWLKASPRKGLSLRKEEIEKLQGGRKL 393

BLAST of Lag0039537 vs. ExPASy TrEMBL
Match: A0A5C7HK10 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018452 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-20
Identity = 59/210 (28.10%), Postives = 105/210 (50.00%), Query Frame = 0

Query: 3   ELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRT------ 62
           E+ K ++ +++  E++ +    E       A +++CLVGK+IS K+ N EAF+       
Sbjct: 5   EIAKLYEKLSIADEDSAIYEMAEEDQLEGVAEVDICLVGKIISGKKANREAFKNLIEKLW 64

Query: 63  ----------------VMKVSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFSD 122
                           V   +    + ++ + G W FD +L+ L++P+    +  + F+ 
Sbjct: 65  SQFGRVEIESVGVNIFVFHFNNQEERNRIWNRGPWYFDNSLIALEKPEGMGNISNLKFNK 124

Query: 123 CPFWVQICNVPTQWQTVQMARSLGGKMG--TVEEDEDEQEVWCPVLYERLPDFCYVCGCL 182
              W+QI +VP      + A+ +  ++G   ++ D+    V   + YERLP+FCYVCG +
Sbjct: 125 VEMWIQIHDVPIMCMNRKAAKWMANQIGWLKLKLDKSNNIVMVSLKYERLPEFCYVCGRI 184

Query: 183 GHVKRECTSEAVVNAASVGD--QYGEWMRA 187
           GH  ++C+ E   N A + D  +YG WMRA
Sbjct: 185 GHGSKDCSDEEAKNGALMSDSSKYGSWMRA 214

BLAST of Lag0039537 vs. ExPASy TrEMBL
Match: A0A5C7IDS9 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008480 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-20
Identity = 62/213 (29.11%), Postives = 108/213 (50.70%), Query Frame = 0

Query: 2   EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK-- 61
           ++L K  +++++  E++++    E         ++ CLVGKV+S KRVN+EAF++V++  
Sbjct: 4   KDLAKLCENLSIKDEDSEIHHISEEVERDGVKDVDHCLVGKVLSGKRVNIEAFKSVIEQL 63

Query: 62  --------------------VSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFS 121
                                     ++ +   G W FDR+L++LK+P+ T  +  + F+
Sbjct: 64  WSPFGNVDIEMVGENIFMFYFKNPEDRRNIWRRGPWHFDRSLIVLKKPEGTGDISTLYFN 123

Query: 122 DCPFWVQICNVPTQWQTVQMARSLGGKMG----TVEEDEDEQEVWCPVLYERLPDFCYVC 181
              FWVQI ++P      +M + L  ++G     ++ +  E  V   + Y+RLP+FCY C
Sbjct: 124 KAEFWVQIHDIPIMCMNRRMVKWLAEQIGERWLRLKLNNSESIVMVGLKYKRLPEFCYAC 183

Query: 182 GCLGHVKRECTSEAVVNAASVG--DQYGEWMRA 187
           G +GH   EC+ E     A  G   ++G WMRA
Sbjct: 184 GRIGHGISECSDEEAKKEAIKGPVTRFGSWMRA 216

BLAST of Lag0039537 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-09
Identity = 31/98 (31.63%), Postives = 51/98 (52.04%), Query Frame = 0

Query: 69  VLSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMG 128
           +L  G WSF+  + +++  + T      +F   PFW+QI  +P ++ T ++  S+G +MG
Sbjct: 75  ILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARIITSIGERMG 134

Query: 129 TVEEDEDEQEV-WCPVLYERLPDFCYVCGCLGHVKREC 166
              E    ++V      YE+L +FC  CG L H   EC
Sbjct: 135 LFLETNLGRDVSVLKFQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149484.14.1e-3032.65uncharacterized protein LOC111017902 [Momordica charantia][more]
XP_022156711.11.3e-2333.33uncharacterized protein LOC111023555 [Momordica charantia][more]
XP_024033132.14.8e-2330.00uncharacterized protein LOC112095437 [Citrus clementina][more]
XP_015380691.18.2e-2333.94uncharacterized protein LOC107174364 [Citrus sinensis][more]
XP_024038344.16.9e-2229.62uncharacterized protein LOC112097374 [Citrus clementina][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D7652.0e-3032.65uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DVS46.1e-2433.33uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A803M8101.4e-2027.02Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A5C7HK102.4e-2028.10CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01845... [more]
A0A5C7IDS93.1e-2029.11CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00848... [more]
Match NameE-valueIdentityDescription
AT3G42140.13.2e-0931.63zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 135..166
e-value: 1.3E-10
score: 40.8
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 67..136
e-value: 6.0E-7
score: 29.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..271
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 139..167
coord: 70..136
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 139..167
coord: 70..136
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 152..167
score: 9.257132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039537.1Lag0039537.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding