
Lag0039533 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGAACAATCCATGAGCACCTCAAAGGGACCGTGGAGGAATATTTTCAAGAATCGTCATCTCCTATATAATTTCACTGATATTAGAGTTGGTAGAGGGGATAAAACACTCTTTTGGGAAGATGTCTGGTTGGGTGCAACTCCCTTTAAAACCACATATCCATCTTTATACAACTTATCTCTCAAGAAGGAGGCCAGCATCGCTGATTTATGGACCGCCGAAAATGGGGCCTGGAATCTCTTTTTAAGGAGACACCTTCAGGAGTCTGAAATCACTGAATGGGTCAATCTATCACACCACCTATCATCCTTTTCCTTCACTAATAGGGATGAGATTTGGCAGCTTGAAAGTGATGGCTTTTTCTCTACAGGATCTCTCACCAGAAAATTGGCTTCCTCTTCGCAATCTATTGACAAATCTTTCTATAGACACTTATGGAAAGGGATTATGCCAAAAAAGTTAAATTCTTCATCTGGGAGCTTAGTCACGCTTGCATCAACACTGCCGACGTCATTCAGCAAAGAAACCCGAATTTAG ATGGGAGAACAATCCATGAGCACCTCAAAGGGACCGTGGAGGAATATTTTCAAGAATCGTCATCTCCTATATAATTTCACTGATATTAGAGTTGGTAGAGGGGATAAAACACTCTTTTGGGAAGATGTCTGGTTGGGTGCAACTCCCTTTAAAACCACATATCCATCTTTATACAACTTATCTCTCAAGAAGGAGGCCAGCATCGCTGATTTATGGACCGCCGAAAATGGGGCCTGGAATCTCTTTTTAAGGAGACACCTTCAGGAGTCTGAAATCACTGAATGGGTCAATCTATCACACCACCTATCATCCTTTTCCTTCACTAATAGGGATGAGATTTGGCAGCTTGAAAGTGATGGCTTTTTCTCTACAGGATCTCTCACCAGAAAATTGGCTTCCTCTTCGCAATCTATTGACAAATCTTTCTATAGACACTTATGGAAAGGGATTATGCCAAAAAAGTTAAATTCTTCATCTGGGAGCTTAGTCACGCTTGCATCAACACTGCCGACGTCATTCAGCAAAGAAACCCGAATTTAG ATGGGAGAACAATCCATGAGCACCTCAAAGGGACCGTGGAGGAATATTTTCAAGAATCGTCATCTCCTATATAATTTCACTGATATTAGAGTTGGTAGAGGGGATAAAACACTCTTTTGGGAAGATGTCTGGTTGGGTGCAACTCCCTTTAAAACCACATATCCATCTTTATACAACTTATCTCTCAAGAAGGAGGCCAGCATCGCTGATTTATGGACCGCCGAAAATGGGGCCTGGAATCTCTTTTTAAGGAGACACCTTCAGGAGTCTGAAATCACTGAATGGGTCAATCTATCACACCACCTATCATCCTTTTCCTTCACTAATAGGGATGAGATTTGGCAGCTTGAAAGTGATGGCTTTTTCTCTACAGGATCTCTCACCAGAAAATTGGCTTCCTCTTCGCAATCTATTGACAAATCTTTCTATAGACACTTATGGAAAGGGATTATGCCAAAAAAGTTAAATTCTTCATCTGGGAGCTTAGTCACGCTTGCATCAACACTGCCGACGTCATTCAGCAAAGAAACCCGAATTTAG MGEQSMSTSKGPWRNIFKNRHLLYNFTDIRVGRGDKTLFWEDVWLGATPFKTTYPSLYNLSLKKEASIADLWTAENGAWNLFLRRHLQESEITEWVNLSHHLSSFSFTNRDEIWQLESDGFFSTGSLTRKLASSSQSIDKSFYRHLWKGIMPKKLNSSSGSLVTLASTLPTSFSKETRI Homology
BLAST of Lag0039533 vs. NCBI nr
Match: KAA0037436.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 2.4e-15 Identity = 55/185 (29.73%), Postives = 81/185 (43.78%), Query Frame = 0
BLAST of Lag0039533 vs. NCBI nr
Match: TYK00226.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 2.4e-15 Identity = 55/185 (29.73%), Postives = 81/185 (43.78%), Query Frame = 0
BLAST of Lag0039533 vs. NCBI nr
Match: XP_026453629.1 (uncharacterized protein LOC113354505 [Papaver somniferum]) HSP 1 Score: 91.7 bits (226), Expect = 7.1e-15 Identity = 52/152 (34.21%), Postives = 78/152 (51.32%), Query Frame = 0
BLAST of Lag0039533 vs. NCBI nr
Match: XP_015161868.1 (PREDICTED: uncharacterized protein LOC107059660 [Solanum tuberosum]) HSP 1 Score: 90.9 bits (224), Expect = 1.2e-14 Identity = 50/148 (33.78%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of Lag0039533 vs. NCBI nr
Match: TYK06777.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 90.5 bits (223), Expect = 1.6e-14 Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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